View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0635_high_14 (Length: 241)
Name: NF0635_high_14
Description: NF0635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0635_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27231626 - 27231466
Alignment:
| Q |
1 |
ccatttggaatcttggaaatttatttgggtttgggttttactatatgcccacatgcacttttctaatacccggattagctaaacaaatttgtcctaaaat |
100 |
Q |
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| T |
27231626 |
ccatttggaatcttggaaatttatttgggttttggttttactatatgcccacatgcacttttctaatacccagattagcgaaacaaatttgtcctaaaat |
27231527 |
T |
|
| Q |
101 |
tatggcannnnnnnnnnnnngattcccaaagtagtatattatatttgttcaactacaccctc |
162 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
27231526 |
tatggca-ttttttgtttttgattcccaaagtagtatattatatttgttcaactacaccctc |
27231466 |
T |
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