View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0635_high_4 (Length: 451)

Name: NF0635_high_4
Description: NF0635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0635_high_4
NF0635_high_4
[»] chr1 (34 HSPs)
chr1 (278-409)||(11687944-11688075)
chr1 (29-122)||(28455898-28455991)
chr1 (29-122)||(39276374-39276467)
chr1 (29-122)||(41761422-41761515)
chr1 (29-122)||(5055799-5055892)
chr1 (29-122)||(32007098-32007191)
chr1 (29-122)||(48660046-48660139)
chr1 (29-124)||(45813022-45813117)
chr1 (29-122)||(41808226-41808319)
chr1 (278-380)||(11691319-11691422)
chr1 (29-122)||(20772-20865)
chr1 (29-121)||(35945822-35945914)
chr1 (29-124)||(192437-192532)
chr1 (29-122)||(29994394-29994487)
chr1 (35-111)||(50106213-50106289)
chr1 (29-124)||(5943703-5943798)
chr1 (29-90)||(41039314-41039375)
chr1 (29-125)||(7059488-7059584)
chr1 (29-124)||(11688285-11688380)
chr1 (30-122)||(46447385-46447481)
chr1 (54-122)||(29587276-29587344)
chr1 (125-171)||(11688186-11688232)
chr1 (32-124)||(26032820-26032915)
chr1 (29-124)||(4065983-4066078)
chr1 (35-84)||(3716424-3716473)
chr1 (29-113)||(13109803-13109887)
chr1 (29-91)||(35110110-35110172)
chr1 (29-122)||(49783731-49783824)
chr1 (29-121)||(21938967-21939059)
chr1 (48-124)||(38817229-38817305)
chr1 (56-122)||(35224364-35224430)
chr1 (39-72)||(16770177-16770210)
chr1 (33-114)||(39284322-39284403)
chr1 (75-124)||(47111479-47111528)
[»] chr8 (34 HSPs)
chr8 (29-122)||(32333138-32333231)
chr8 (29-122)||(28817280-28817373)
chr8 (29-122)||(35779508-35779601)
chr8 (29-122)||(1351-1444)
chr8 (29-122)||(6602529-6602622)
chr8 (29-122)||(6677982-6678075)
chr8 (29-122)||(7813346-7813439)
chr8 (29-122)||(42885198-42885291)
chr8 (29-121)||(1078659-1078751)
chr8 (29-122)||(70534-70627)
chr8 (33-122)||(7792685-7792774)
chr8 (29-122)||(42192650-42192743)
chr8 (29-115)||(31532136-31532222)
chr8 (29-122)||(4530993-4531086)
chr8 (29-122)||(5385362-5385455)
chr8 (29-122)||(10963253-10963344)
chr8 (29-122)||(39303333-39303427)
chr8 (29-122)||(3822420-3822513)
chr8 (29-122)||(9292042-9292135)
chr8 (29-122)||(40911245-40911337)
chr8 (29-122)||(45264651-45264743)
chr8 (29-122)||(12534731-12534822)
chr8 (29-122)||(31969731-31969824)
chr8 (46-124)||(18386730-18386808)
chr8 (29-122)||(6099596-6099689)
chr8 (33-122)||(39435306-39435395)
chr8 (39-122)||(41849252-41849335)
chr8 (29-87)||(13891149-13891207)
chr8 (35-124)||(18752363-18752452)
chr8 (66-124)||(22203722-22203780)
chr8 (29-105)||(33731475-33731551)
chr8 (31-69)||(20269607-20269645)
chr8 (31-69)||(21056236-21056274)
chr8 (29-122)||(29425381-29425468)
[»] chr4 (46 HSPs)
chr4 (29-124)||(45874077-45874172)
chr4 (29-122)||(28798399-28798492)
chr4 (29-122)||(34739304-34739397)
chr4 (29-122)||(43139917-43140010)
chr4 (29-122)||(1173975-1174068)
chr4 (29-122)||(23417494-23417587)
chr4 (29-122)||(55214676-55214769)
chr4 (29-124)||(12735453-12735548)
chr4 (29-122)||(19849514-19849607)
chr4 (29-122)||(26424869-26424961)
chr4 (29-122)||(53457848-53457941)
chr4 (29-122)||(238469-238562)
chr4 (29-122)||(18257353-18257446)
chr4 (29-122)||(54768443-54768536)
chr4 (29-119)||(29581055-29581144)
chr4 (29-122)||(12867865-12867958)
chr4 (29-121)||(39807869-39807961)
chr4 (33-124)||(22608007-22608098)
chr4 (29-121)||(55400253-55400345)
chr4 (29-114)||(19673940-19674025)
chr4 (29-121)||(23710344-23710436)
chr4 (29-122)||(19225283-19225376)
chr4 (29-114)||(24417889-24417974)
chr4 (33-122)||(49030754-49030842)
chr4 (31-124)||(32778147-32778238)
chr4 (29-122)||(50033405-50033499)
chr4 (29-122)||(2864759-2864852)
chr4 (29-122)||(19814129-19814222)
chr4 (29-122)||(37134072-37134165)
chr4 (29-122)||(11278006-11278095)
chr4 (29-124)||(24517994-24518089)
chr4 (30-124)||(22910269-22910363)
chr4 (30-124)||(22968159-22968253)
chr4 (56-115)||(3465783-3465842)
chr4 (32-86)||(33770628-33770682)
chr4 (53-122)||(32441119-32441188)
chr4 (33-113)||(516471-516551)
chr4 (33-85)||(1966611-1966663)
chr4 (29-124)||(2804544-2804637)
chr4 (33-121)||(12767112-12767200)
chr4 (31-124)||(51287623-51287717)
chr4 (29-71)||(52172001-52172043)
chr4 (95-124)||(16342826-16342855)
chr4 (29-86)||(37620677-37620734)
chr4 (42-86)||(2075565-2075609)
chr4 (48-124)||(16887581-16887657)
[»] scaffold0032 (1 HSPs)
scaffold0032 (29-122)||(56505-56598)
[»] chr7 (44 HSPs)
chr7 (29-122)||(44083964-44084057)
chr7 (29-121)||(2146661-2146753)
chr7 (29-122)||(4106762-4106855)
chr7 (29-122)||(4107333-4107426)
chr7 (29-122)||(40058262-40058355)
chr7 (29-122)||(23358209-23358302)
chr7 (29-122)||(31770543-31770636)
chr7 (29-117)||(47570729-47570817)
chr7 (29-122)||(8439102-8439195)
chr7 (29-122)||(47250262-47250355)
chr7 (29-121)||(25546286-25546378)
chr7 (29-124)||(27229488-27229584)
chr7 (29-122)||(7162801-7162892)
chr7 (29-122)||(5772830-5772923)
chr7 (29-122)||(25112258-25112351)
chr7 (29-114)||(38781219-38781304)
chr7 (29-122)||(41183839-41183932)
chr7 (29-123)||(11355846-11355940)
chr7 (29-122)||(43753764-43753858)
chr7 (29-122)||(38033753-38033846)
chr7 (29-121)||(48146778-48146870)
chr7 (35-122)||(43203330-43203417)
chr7 (29-115)||(39513994-39514080)
chr7 (29-122)||(28603035-28603128)
chr7 (31-124)||(32606343-32606436)
chr7 (29-122)||(15634890-15634983)
chr7 (29-122)||(29484766-29484859)
chr7 (29-121)||(47557806-47557898)
chr7 (29-124)||(5587302-5587397)
chr7 (29-124)||(5592263-5592358)
chr7 (30-124)||(43170951-43171045)
chr7 (33-122)||(13887195-13887282)
chr7 (29-78)||(34763510-34763559)
chr7 (29-64)||(19630679-19630714)
chr7 (29-122)||(42081630-42081720)
chr7 (29-121)||(4001855-4001945)
chr7 (42-122)||(47960979-47961059)
chr7 (29-121)||(48444163-48444255)
chr7 (31-86)||(10220485-10220540)
chr7 (33-91)||(35577891-35577949)
chr7 (29-121)||(27915591-27915684)
chr7 (37-113)||(5462969-5463045)
chr7 (32-84)||(18506290-18506341)
chr7 (68-124)||(40642996-40643052)
[»] chr2 (38 HSPs)
chr2 (29-122)||(26605648-26605741)
chr2 (29-124)||(34460391-34460486)
chr2 (29-122)||(10639617-10639710)
chr2 (29-122)||(33083565-33083658)
chr2 (29-122)||(37197621-37197714)
chr2 (29-122)||(11708702-11708795)
chr2 (29-122)||(19537331-19537424)
chr2 (29-122)||(23839883-23839976)
chr2 (29-122)||(11459739-11459832)
chr2 (29-122)||(29659229-29659322)
chr2 (29-122)||(45125176-45125269)
chr2 (29-122)||(19048778-19048871)
chr2 (33-122)||(19816244-19816333)
chr2 (29-122)||(39535545-39535638)
chr2 (29-124)||(38440208-38440303)
chr2 (29-122)||(11816561-11816655)
chr2 (29-118)||(4851348-4851437)
chr2 (29-124)||(15782612-15782706)
chr2 (29-124)||(40786220-40786315)
chr2 (29-124)||(43778479-43778574)
chr2 (39-121)||(16654388-16654470)
chr2 (29-122)||(39831455-39831547)
chr2 (29-121)||(7275897-7275989)
chr2 (29-124)||(43684091-43684186)
chr2 (29-124)||(27137929-27138023)
chr2 (29-122)||(34234554-34234645)
chr2 (29-71)||(42578243-42578285)
chr2 (29-122)||(7349122-7349215)
chr2 (29-124)||(44181898-44181993)
chr2 (29-122)||(4800900-4800993)
chr2 (48-121)||(38400494-38400567)
chr2 (34-124)||(15072115-15072204)
chr2 (31-69)||(15344978-15345016)
chr2 (29-91)||(40825169-40825231)
chr2 (56-121)||(33564945-33565010)
chr2 (32-124)||(6055019-6055111)
chr2 (74-122)||(25501839-25501887)
chr2 (29-124)||(42025692-42025788)
[»] scaffold1348 (1 HSPs)
scaffold1348 (29-122)||(873-966)
[»] scaffold0119 (2 HSPs)
scaffold0119 (29-122)||(13962-14055)
scaffold0119 (29-122)||(19642-19735)
[»] scaffold0044 (1 HSPs)
scaffold0044 (29-122)||(9984-10077)
[»] chr6 (20 HSPs)
chr6 (29-122)||(33704240-33704333)
chr6 (29-122)||(33621518-33621611)
chr6 (29-122)||(21037315-21037407)
chr6 (29-124)||(4464149-4464244)
chr6 (29-122)||(28322956-28323049)
chr6 (44-123)||(11572031-11572110)
chr6 (29-122)||(2959173-2959266)
chr6 (29-122)||(21000716-21000809)
chr6 (31-121)||(16518448-16518536)
chr6 (29-122)||(19145495-19145587)
chr6 (29-126)||(29009661-29009758)
chr6 (29-122)||(32289370-32289462)
chr6 (29-124)||(12252045-12252140)
chr6 (29-124)||(24619090-24619185)
chr6 (29-122)||(361035-361128)
chr6 (29-78)||(35218651-35218700)
chr6 (29-124)||(10999419-10999514)
chr6 (31-78)||(28592141-28592188)
chr6 (31-124)||(32353954-32354046)
chr6 (29-122)||(584795-584887)
[»] chr5 (26 HSPs)
chr5 (29-122)||(13203981-13204074)
chr5 (29-122)||(21018247-21018340)
chr5 (29-122)||(4824950-4825043)
chr5 (29-122)||(35317708-35317801)
chr5 (29-119)||(31909396-31909486)
chr5 (29-122)||(6021016-6021109)
chr5 (29-122)||(12257380-12257473)
chr5 (29-121)||(2971009-2971101)
chr5 (29-121)||(29265900-29265992)
chr5 (29-124)||(40177646-40177741)
chr5 (33-122)||(1191555-1191644)
chr5 (29-121)||(27721456-27721548)
chr5 (30-124)||(21112071-21112165)
chr5 (29-122)||(3386904-3387004)
chr5 (29-114)||(28591361-28591446)
chr5 (29-78)||(32143425-32143474)
chr5 (29-124)||(14270546-14270641)
chr5 (29-121)||(23262573-23262661)
chr5 (29-122)||(8734020-8734114)
chr5 (42-122)||(9576985-9577065)
chr5 (29-124)||(35545955-35546050)
chr5 (29-87)||(17984753-17984811)
chr5 (44-121)||(2755950-2756027)
chr5 (29-122)||(2786295-2786387)
chr5 (58-123)||(3049094-3049159)
chr5 (80-121)||(30127919-30127960)
[»] chr3 (27 HSPs)
chr3 (29-122)||(7824465-7824558)
chr3 (29-122)||(29689493-29689586)
chr3 (29-122)||(43247661-43247754)
chr3 (29-122)||(9349687-9349780)
chr3 (29-122)||(54151692-54151785)
chr3 (29-122)||(54158290-54158383)
chr3 (29-122)||(55018045-55018138)
chr3 (29-124)||(28844526-28844622)
chr3 (31-122)||(4601449-4601540)
chr3 (29-122)||(3113006-3113099)
chr3 (29-122)||(36229005-36229098)
chr3 (29-122)||(51665936-51666029)
chr3 (29-124)||(1778873-1778968)
chr3 (34-122)||(35461495-35461583)
chr3 (29-122)||(33334632-33334725)
chr3 (29-122)||(52500862-52500955)
chr3 (29-122)||(42392816-42392909)
chr3 (29-115)||(38257314-38257400)
chr3 (29-122)||(29750645-29750737)
chr3 (29-121)||(32001435-32001527)
chr3 (29-88)||(7958627-7958686)
chr3 (29-72)||(55320411-55320454)
chr3 (32-121)||(8151373-8151462)
chr3 (29-121)||(40756738-40756831)
chr3 (29-122)||(43775247-43775340)
chr3 (29-121)||(475292-475383)
chr3 (29-124)||(448886-448981)
[»] scaffold0053 (1 HSPs)
scaffold0053 (29-124)||(22185-22280)
[»] scaffold0038 (1 HSPs)
scaffold0038 (29-122)||(114276-114369)
[»] scaffold0067 (1 HSPs)
scaffold0067 (29-122)||(34842-34936)
[»] scaffold0360 (1 HSPs)
scaffold0360 (29-124)||(14517-14622)
[»] scaffold0352 (1 HSPs)
scaffold0352 (29-121)||(8954-9046)
[»] scaffold0079 (1 HSPs)
scaffold0079 (95-124)||(50006-50035)


Alignment Details
Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 278 - 409
Target Start/End: Complemental strand, 11688075 - 11687944
Alignment:
Q  278 aaattggtggtcttctgcttcgttttctgaatttcagctgaagttattttttgataagctgtaattttttactttgaagggtcaattttggtatgagggt 377  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11688075 aaattggtggtcttctgcttctttttctgaatttcagctgaagttattttttgataagctgtaattttttactttgaagggtcaattttggtatgagtgt 11687976  T
Q  378 aaacaattgattctgtaaagtataatctaccc 409  Q
    ||||||||||||||||||||||||||| ||||    
T  11687975 aaacaattgattctgtaaagtataatcaaccc 11687944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 28455991 - 28455898
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28455991 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttg 28455898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 39276467 - 39276374
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39276467 agtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttg 39276374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 41761422 - 41761515
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41761422 agtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttg 41761515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 5055799 - 5055892
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  5055799 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 5055892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 32007191 - 32007098
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  32007191 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 32007098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 48660139 - 48660046
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  48660139 agtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtccggccttgcaatttcggcatttg 48660046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 45813022 - 45813117
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | | ||||| ||||||||||||||||||||||    
T  45813022 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgatgtccgaccttgcaatttcggcatttgtc 45813117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 41808319 - 41808226
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  41808319 agtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 41808226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 278 - 380
Target Start/End: Complemental strand, 11691422 - 11691319
Alignment:
Q  278 aaattggtggtcttctgcttcgttttctgaatttcagctgaagttattttttgataagctgtaat-tttttactttgaagggtcaattttggtatgaggg 376  Q
    ||||||||||||||||||||  |||||||||||||| ||||| |||||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  11691422 aaattggtggtcttctgcttatttttctgaatttcatctgaatttatttttggataagctttaatatttttactttgaagggtcagttttggtatgaggg 11691323  T
Q  377 taaa 380  Q
    ||||    
T  11691322 taaa 11691319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 20865 - 20772
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||| |  ||||| |||||||||||||||||||||    
T  20865 agtggtaatccactaaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacggcgtcctgccttgcaatttcggcatttg 20772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 35945914 - 35945822
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||||||||||||||||| |||||||||||| ||||||  ||||||||||||| |||| |||||||| ||||| ||||||||||||||    
T  35945914 agtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacccaggtcacaacgtccagccttacaatttcggcattt 35945822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 192532 - 192437
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||| |||||||||||||||||||||||| |||||||  |||||||||| ||| || |||||||||||||||||||||  |||||||||    
T  192532 agtggtaatccgctgaaaataaactcacacacaactgtgaggtcctgggttcgaacacggatcacaacgtccggccttgcaattttagcatttgtc 192437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 29994394 - 29994487
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||   ||||| ||||||||||||||||||||||    
T  29994394 agtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgcaatttcggcatttg 29994487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 50106213 - 50106289
Alignment:
Q  35 aatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaat 111  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||| ||||||||||||    
T  50106213 aatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgttcggccttgcaat 50106289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 5943798 - 5943703
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||| ||||||| ||||| |||||||||| |||||| |||||||  | ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  5943798 agtgataatccattgaaattaaactcacaaacaactgtgaggtcctgagttcgaacccgggtcacgacgtccggccttgcaatttcggcatttgtc 5943703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 41039314 - 41039375
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggt 90  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  41039314 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggt 41039375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 7059584 - 7059488
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtcc 125  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||| | |||||||||||||| | ||||| | ||||||||||| | |||||||||    
T  7059584 agtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtctgaccttgcaattttgacatttgtcc 7059488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 11688380 - 11688285
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |  |||||||| ||||| |||||| ||| ||||||||||||  |||||||    
T  11688380 agtggtaatccactgaaaataaactcacacacaactctgaagtcctgaattcgaaccagggtcacaacgttcgggcttgcaatttcgatatttgtc 11688285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 46447385 - 46447481
Alignment:
Q  30 gtggtaatccactgaaaataa----actcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||    ||||||||| |||| ||||||| |||||||||||||||||  | |||||  |||||||||||||||||||||    
T  46447385 gtggtaatccactgaaaataattaaactcacacataactgtgaggtcccgggttcgaacccgggttacgacgtcgagccttgcaatttcggcatttg 46447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 29587344 - 29587276
Alignment:
Q  54 cacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||| | ||||||| ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  29587344 cacacacaattgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcggcatttg 29587276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 11688232 - 11688186
Alignment:
Q  125 cggaaacttacaattttgtgtttttcatctctcaagtaaagttaaca 171  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  11688232 cggaaacttacacttttgtgtttttcatctctcaagtaaagttaaca 11688186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 26032915 - 26032820
Alignment:
Q  32 ggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgt---ccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||||||| |||||||||||| |||| ||||||  | |||||||||||||||| | ||||   ||| |||| |||||||||||||||||    
T  26032915 ggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtccgccgaccttacaatttcggcatttgtc 26032820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 4066078 - 4065983
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||| |||||||| |||||||||| |||| | | ||||||| | ||||||||||| || |||||| | | ||||||||||||| |||||||    
T  4066078 agtggtaattcactgaaattaaactcacatacaattgtaaggtctcagattcgaacccggatcacaacgttcagtcttgcaatttcggtatttgtc 4065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 3716473 - 3716424
Alignment:
Q  35 aatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 84  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  3716473 aatccactaaaaataaactcacacacaactgtgaggtctcaggttcgaac 3716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 13109887 - 13109803
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaattt 113  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    ||||||||  |||||  | ||||||| |||||||||||    
T  13109887 agtggtaatccactgaaattaaactcacacacaactgtgaggttctaggttcgaattcgggttacgacgtccgaccttgcaattt 13109803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 35110110 - 35110172
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc 91  Q
    ||||||||||| || ||| ||||||||||||||||| | |||||  |||||||||||||||||    
T  35110110 agtggtaatcctctcaaattaaactcacacacaactgtaaggtcctgggttcgaacccgggtc 35110172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 49783824 - 49783731
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| |||| ||||| |||||| ||||||  ||||||||||||||  ||   |||| || ||||||||||||| ||||||    
T  49783824 agtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaacccgaatcatgacgttcgaccttgcaatttcgacatttg 49783731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 21939059 - 21938967
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||| || |||||| ||||||| ||||||||| |||||||  || |||||| |||| ||   || ||||||||| ||||||||||||||    
T  21939059 agtggtaaaccgctgaaattaaactcgcacacaactgtgaggtcctggattcgaatccggatcatgacatccggccttacaatttcggcattt 21938967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 38817229 - 38817305
Alignment:
Q  48 taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||| |||||||||| | ||||||||||||||||||| ||| || | |||||||| ||| |||| ||| ||||||||    
T  38817229 taaattcacacacaattgtgaggtctcgggttcgaactcggatcacgacgtccggtctttcaatatcgacatttgtc 38817305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 35224430 - 35224364
Alignment:
Q  56 cacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||| |||||||  |||||||||||||||||   ||||||||||||||| |||  |||||||    
T  35224430 cacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcatttttcgcatttg 35224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 16770177 - 16770210
Alignment:
Q  39 cactgaaaataaactcacacacaactctgaggtc 72  Q
    |||||||||||||||||||||||||| |||||||    
T  16770177 cactgaaaataaactcacacacaactgtgaggtc 16770210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 39284403 - 39284322
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 114  Q
    |||||||||  ||| |||||||||| |||||| ||||||||  ||||||||||||  || | ||||||| |||| |||||||    
T  39284403 gtaatccacaaaaattaaactcacatacaactgtgaggtcttaggttcgaacccgaatcacgacgtccgaccttacaatttc 39284322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 47111528 - 47111479
Alignment:
Q  75 gggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||| ||||| |||| | ||||||| ||||||||||||||||||||||    
T  47111528 gggttcaaacccaggtcacgacgtccgaccttgcaatttcggcatttgtc 47111479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 32333231 - 32333138
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32333231 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttg 32333138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 28817373 - 28817280
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28817373 agtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttg 28817280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 35779508 - 35779601
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  35779508 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggcatttg 35779601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 1351 - 1444
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  1351 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtccggccttgcaattttggcatttg 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 6602529 - 6602622
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  6602529 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 6602622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 6677982 - 6678075
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  6677982 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 6678075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 7813439 - 7813346
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||| ||||||||||||||||| |||||||    
T  7813439 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgagtcacaacatccggccttgcaatttcagcatttg 7813346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 42885291 - 42885198
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  42885291 agtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 42885198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 1078659 - 1078751
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||   |||||||||||||||||||||||||||    
T  1078659 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacctgggtcatgacgtccggccttgcaatttcggcattt 1078751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 70534 - 70627
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||   ||||||| ||||||||||||||||||||    
T  70534 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcaaacccgggtcatgacgtccgaccttgcaatttcggcatttg 70627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 7792774 - 7792685
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  7792774 gtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtccagccttgcaatttcggcatttg 7792685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 42192650 - 42192743
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  42192650 agtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggtcatgacgtccggccttgcaatttcggcatttg 42192743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 31532136 - 31532222
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 115  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| | ||||| || ||||||| |||||||||||||||||||||||    
T  31532136 agtggtaatccactgaaattaaactcacacacaactgtgaggtccccggttcaaatccgggtcacaacgtccggccttgcaatttcg 31532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 4530993 - 4531086
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| |||||||||||||| || ||||||| ||||||||||||||||||   |||||| |||||||||||||||||||||    
T  4530993 agtggtaaaccactgaaattaaactcacacacagctgtgaggtcccgggttcgaacccgggtcatgacgtccagccttgcaatttcggcatttg 4531086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 5385455 - 5385362
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||  |||||||| ||||||||||||||||| ||||||| |||||||||||| ||||| | |||||| |||||||||||||||||||||    
T  5385455 agtggtaaatcactgaaattaaactcacacacaactgtgaggtcccgggttcgaacctgggtcacgacgtccagccttgcaatttcggcatttg 5385362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 10963253 - 10963344
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||| || || |||||| |||||||| ||||||||||||||    
T  10963253 agtggtaatccactgaaaataaactcacaca--actgtgaggtcccgggttcgaacctggatcacaacgttcggccttgtaatttcggcatttg 10963344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 39303427 - 39303333
Alignment:
Q  29 agtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||| |||||  |||   ||||||||||||||||||||||||||||    
T  39303427 agtggtaatccactgaaattaaaactcacacacaactgtgaggtctcgggttcaaacccatgtcatgacgtccggccttgcaatttcggcatttg 39303333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 3822513 - 3822420
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||| |||| ||| ||||||||||||||||| |||| ||  ||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  3822513 agtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtcacaacgtccgaccttacaatttcggcatttg 3822420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 9292135 - 9292042
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||| ||| || |||||||  |||||| ||||||||||| || |||||||| ||||||    
T  9292135 agtggtaatccactgaaaataaactcacacacaactgtgaagtcccgagttcgaattcgggtcacaacgtccggctttacaatttcgacatttg 9292042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 40911337 - 40911245
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||  | ||||||| ||| |||||||||||||| | ||||||||||||||||||||||||||||    
T  40911337 agtggtaagccactgaaattaaactcacacacagttgtgaggtcccgg-ttcgaacccgggtcacgacgtccggccttgcaatttcggcatttg 40911245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 45264651 - 45264743
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||| |||||||||||| |||| ||||||| |||||||||||||| ||| | |||| || || |||||||||||||||||    
T  45264651 agtggtaatccactgaaattaaactcacacaaaactgtgaggtcccgggttcgaacccgagtcacgacgttcgacc-tgcaatttcggcatttg 45264743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 12534731 - 12534822
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||| ||||||||||||||||| ||  ||| |||| ||  |||||||||||||| || | ||||||||||||||||||||||||||||    
T  12534731 agtggtaatctactgaaaataaactcacgca--actgtgagatcctgggttcgaacccggatcacgacgtccggccttgcaatttcggcatttg 12534822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 31969731 - 31969824
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| |||| |||||||||||| ||||||| || |||||||||||| ||   ||||| ||||||| ||||||||||||||    
T  31969731 agtggtaaaccactgaaattaaattcacacacaactttgaggtcccgtgttcgaacccggatcatgacgtctggccttgaaatttcggcatttg 31969824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 18386808 - 18386730
Alignment:
Q  46 aataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||   || |||| |||||||||||| |||||||||    
T  18386808 aataaactcacacacaactgtgaggtcccgggttcgaacccgagtcatgacatccgaccttgcaatttcagcatttgtc 18386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 6099689 - 6099596
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||| ||| ||||||||| | ||| | |||||| |||||||||||| ||||||   ||||||||||||||||||||| ||||||    
T  6099689 agtggtaaaccactaaaactaaactcacgcgcaattgtgaggtttcgggttcgaactcgggtcatgacgtccggccttgcaatttcgacatttg 6099596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 39435395 - 39435306
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||  ||| ||||||||||||||||| ||||||||||||||||||||| | ||   ||||||| ||||||||||| | ||||||    
T  39435395 gtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaacccagatcatgacgtccgaccttgcaattttgacatttg 39435306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 41849252 - 41849335
Alignment:
Q  39 cactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||||||||||  ||||||  ||| ||||||||| | || | ||||||| ||||||||||||||||||||    
T  41849252 cactgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtccgaccttgcaatttcggcatttg 41849335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 13891207 - 13891149
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccg 87  Q
    |||||||| ||||||||||||||||||||||||||| |||||||   ||||||||||||    
T  13891207 agtggtaaaccactgaaaataaactcacacacaactgtgaggtcctaggttcgaacccg 13891149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 18752452 - 18752363
Alignment:
Q  35 aatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||| ||||| ||||||||||| | ||||  ||||||||||||| | || | ||||||| |||| ||||||||| |||||||    
T  18752452 aatccactgaaattaaacccacacacaactgtaaggttccgggttcgaaccccgatcacgacgtccgaccttacaatttcggtatttgtc 18752363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 22203780 - 22203722
Alignment:
Q  66 tgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||| |||||||||||||| | ||||| | |||||||||||||| |||||||    
T  22203780 tgaggtctcggattcgaacccgggtcacgacgtctgaccttgcaatttcggtatttgtc 22203722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 33731475 - 33731551
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcct 105  Q
    |||||||| ||||| ||| |||||||||||||||||  |||||| || ||| ||||||||||| | ||||| |||||    
T  33731475 agtggtaaaccactaaaattaaactcacacacaactgggaggtcccgagtttgaacccgggtcacgacgtctggcct 33731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 20269645 - 20269607
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgag 69  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  20269645 tggtaatccattgaaaataaactcacacacaactgtgag 20269607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 21056274 - 21056236
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgag 69  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  21056274 tggtaatccattgaaaataaactcacacacaactgtgag 21056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 29425468 - 29425381
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||| ||||||||||||||| |  ||| || ||||      ||||||||   ||||||||||||||||||| ||||||||    
T  29425468 agtggtaatccactgaaattaaactcacacacaattgcgagatcccggg------cccgggtcatgacgtccggccttgcaattttggcatttg 29425381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 45874172 - 45874077
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  45874172 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggcatttgtc 45874077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 28798399 - 28798492
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  28798399 agtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcggcatttg 28798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 34739397 - 34739304
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  34739397 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 34739304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 43139917 - 43140010
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  43139917 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 43140010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 1174068 - 1173975
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||   ||||||||||||||||||||||||||||    
T  1174068 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcggcatttg 1173975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 23417494 - 23417587
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  23417494 agtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggcatttg 23417587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 55214769 - 55214676
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  55214769 agtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttggcatttg 55214676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 12735548 - 12735453
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||| |||||| |||||| ||||||||||    
T  12735548 agtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtctggccttacaattttggcatttgtc 12735453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 19849514 - 19849607
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||    
T  19849514 agtggtaaaccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcggcatttg 19849607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 26424869 - 26424961
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   |||||| |||||||||||||||||||||    
T  26424869 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtcc-gccttgcaatttcggcatttg 26424961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 53457941 - 53457848
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||   ||||||| ||||||||||||||||||||    
T  53457941 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccgaccttgcaatttcggcatttg 53457848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 238469 - 238562
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    ||||| |||||||||||||||||||||    
T  238469 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccagccttgcaatttcggcatttg 238562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 18257446 - 18257353
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||| ||   ||||||||||||||||||||||||||||    
T  18257446 agtggtaatccactgaaaataaactcacgcacaactgtgaggtcccgggctcgaacccggatcatgacgtccggccttgcaatttcggcatttg 18257353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 54768443 - 54768536
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||  |||||||||||||||||   ||||||||||||||||||||||||||||    
T  54768443 agtggtaatccactgaaaaaaaactcgcacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 54768536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 29581055 - 29581144
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcat 119  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||  |||| | |||||||||||||||||||||||||    
T  29581055 agtggtaatccact-aaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtccggccttgcaatttcggcat 29581144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 12867958 - 12867865
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||| ||||||| |||| || | ||||||||| |||||| | ||||||| ||||||||||||||||||||    
T  12867958 agtggtaatccactgaaaataaactcactcacaactgtgagatcccaggttcgaactcgggtcacgacgtccgaccttgcaatttcggcatttg 12867865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 39807961 - 39807869
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| || |||||||| |||||| | | ||| |||||||||||||||||||||    
T  39807961 agtggtaatccactgaaattaaactcacacacaactgtgaggtcccgagttcgaactcgggtcacgatgtctggccttgcaatttcggcattt 39807869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 22608098 - 22608007
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||||| ||| ||||    
T  22608098 gtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcgacatctgtc 22608007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 55400345 - 55400253
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||||||||||||||||||||||| |||||| ||||||  || ||||||| |||| ||   |||||||||||||||||||||||||||    
T  55400345 agtggtaatccactgaaaataaactcacatacaactatgaggttccgagttcgaatccggatcatgacgtccggccttgcaatttcggcattt 55400253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 19673940 - 19674025
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 114  Q
    |||||||||||||||||| ||||||| |||| || | ||||||| ||||||||||||| |||| |||||| |||||||||||||||    
T  19673940 agtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacccaggtcacaacgttcggccttgcaatttc 19674025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 23710344 - 23710436
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||||||||| |||||||||||  |||| ||||||  | |||||||| ||||||| | ||||||||||||||||||||| |||||    
T  23710344 agtggtaatccactgaaattaaactcacacgtaactgtgaggttccaggttcgaatccgggtcacgacgtccggccttgcaatttcgacattt 23710436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 19225376 - 19225283
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||| ||||| | ||||||| ||||||||||||||| ||   ||||||||| || |||||||||||||||    
T  19225376 agtggtaaaccactgaaactaaactcacgcacaattgtgaggtcccgggttcgaacccggatcatgacgtccggctttacaatttcggcatttg 19225283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 24417889 - 24417974
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 114  Q
    |||||||||||||| ||| ||||||||  ||||||| ||||||||||| |||||||||||||| | |||||  |||||||||||||    
T  24417889 agtggtaatccactaaaattaaactcatccacaactgtgaggtctcggattcgaacccgggtcacgacgtcgtgccttgcaatttc 24417974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 49030754 - 49030842
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||  ||||||||||||||||| |||||| || ||||||||| ||| || | ||||||||||||||||||||| ||||||    
T  49030754 gtaatccactgaagttaaactcacacacaactatgaggt-tccggttcgaactcggatcacgacgtccggccttgcaatttcgacatttg 49030842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 32778238 - 32778147
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||| ||||||||||||||||  | | |||||||||| |||||||||||| || | ||||||| ||||||||||| || |||||||    
T  32778238 tggtaatccactaaaaataaactcacaca--attgtgaggtctcgtgttcgaacccggatcacgacgtccgaccttgcaattttggtatttgtc 32778147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 50033499 - 50033405
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtcc-ggccttgcaatttcggcatttg 122  Q
    ||||||||| || ||||| |||||| |||||||||| ||| |||||  ||||||||||||||| |||||||| | | ||||||||||||||||||    
T  50033499 agtggtaattcattgaaattaaacttacacacaactgtgatgtctcatgttcgaacccgggtcacaacgtccagtctttgcaatttcggcatttg 50033405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 2864759 - 2864852
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||  ||||| ||| ||||||||||||||||||||    |||||||||||||||| | |||||| |||||||||||| ||||||||    
T  2864759 agtggtaaacctttgaaattaagctcacacacaactctgaggttctaggttcgaacccgggtcacgacgtcccgccttgcaatttaggcatttg 2864852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 19814222 - 19814129
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||| ||||||| |||||||||||| || | ||||||| | |||| |||||| |||| | |||||||||||| ||||||| |||||||    
T  19814222 agtggtaatcaactgaaattaaactcacacataattgtgaggtcccaggtttgaacccaggtcacgacgtccggccttacaatttctgcatttg 19814129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 37134165 - 37134072
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||||| ||| || |||||||||||||||| ||   || |||| ||||| |||||| |||||||    
T  37134165 agtggtaaaccactgaaattaaactcacacacaactgtgaagtttcgggttcgaacccggatcatgacatccgaccttgtaatttcagcatttg 37134072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 11278095 - 11278006
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||    ||| ||||||| |||||| |||||||||||   | ||||||||||||||||||||||||||    
T  11278095 agtggtaaaccactgaaattaaactcaca----actgtgaggtcccgggtttgaacccgggtcatgatgtccggccttgcaatttcggcatttg 11278006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 24517994 - 24518089
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||| || | ||| |||||||||||| || | |||| | |||||||||||| |||||| |||||||||| ||| ||||||| |||||||||    
T  24517994 agtggtaattcattaaaattaaactcacacataattgtgagatttcgggttcgaacacgggtcacaacgtccggtcttacaatttcagcatttgtc 24518089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 22910269 - 22910363
Alignment:
Q  30 gtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||| | ||||| |||||| | |||||||| |||| || | |||||||||||||||| | ||||||| ||||||||||||| | ||||||    
T  22910269 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcgacttttgtc 22910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 22968253 - 22968159
Alignment:
Q  30 gtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||| | ||||| |||||| | |||||||| |||| || | |||||||||||||||| | ||||||| ||||||||||||| | ||||||    
T  22968253 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcgacttttgtc 22968159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 3465842 - 3465783
Alignment:
Q  56 cacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 115  Q
    ||||||||| ||||||| || ||||||||| || || |||||||||||||||||||||||    
T  3465842 cacacaactatgaggtcccgagttcgaacctggatcacaacgtccggccttgcaatttcg 3465783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 33770682 - 33770628
Alignment:
Q  32 ggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 86  Q
    ||||| ||||||||| ||||||||||||||||| ||| ||| |||||||||||||    
T  33770682 ggtaaaccactgaaattaaactcacacacaactatgaagtcccgggttcgaaccc 33770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 32441119 - 32441188
Alignment:
Q  53 tcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||| ||||||| ||||||| ||||||||||||||||||   | ||| ||||||||||||||| ||||||    
T  32441119 tcacgcacaactgtgaggtcccgggttcgaacccgggtcatgatgtctggccttgcaatttcgacatttg 32441188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 516471 - 516551
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaattt 113  Q
    ||||||||| |||||||||||||||||||| | |||| ||  |||||| ||| || ||| ||||||||  |||||||||||    
T  516471 gtaatccaccgaaaataaactcacacacaattgtgagatcctgggttcaaactcgagtcacaacgtccaaccttgcaattt 516551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 1966663 - 1966611
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacc 85  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||  ||||||||    
T  1966663 gtaatccactgaaattaaactcacacacaactgtgaggtcccgaattcgaacc 1966611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 2804637 - 2804544
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||| ||| |||||||||| | ||||   |||||   |||||||||||||||| ||||||||| |||| ||||||  |||||||||    
T  2804637 agtggtaatccacttaaattaaactcacataaaacta--aggtcctaggttcgaacccgggtcacaacgtccgaccttacaattttagcatttgtc 2804544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 12767200 - 12767112
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||| ||| ||||| ||||||||||||||||| |||||| |||| ||||||||| | ||   |||||||  ||| ||||||||||||||    
T  12767200 gtaaaccagtgaaattaaactcacacacaactgtgaggtttcggattcgaacccagatcatgacgtccgatcttacaatttcggcattt 12767112  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 51287717 - 51287623
Alignment:
Q  31 tggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||| |||||||| |||| ||||||||||||| |||||| |||||||  ||||| | || | ||||| | |||| |||||| ||||||||||    
T  51287717 tggtaattcactgaaattaaaactcacacacaactgtgaggtttcgggtttaaacccagatcacgacgtctgaccttacaattttggcatttgtc 51287623  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 52172001 - 52172043
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggt 71  Q
    |||||||||||||||||| ||||||||||||||| | ||||||    
T  52172001 agtggtaatccactgaaattaaactcacacacaattgtgaggt 52172043  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Original strand, 16342826 - 16342855
Alignment:
Q  95 acgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||||||||||||||||||||||    
T  16342826 acgtccggccttgcaatttcggcatttgtc 16342855  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 37620734 - 37620677
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 86  Q
    |||||||||||||||||| |||||||||||| | || |||  || |||||||||||||    
T  37620734 agtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaaccc 37620677  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 2075609 - 2075565
Alignment:
Q  42 tgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 86  Q
    ||||| |||||||||||| |||| ||||||| |||||||||||||    
T  2075609 tgaaattaaactcacacataactgtgaggtcccgggttcgaaccc 2075565  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 16887581 - 16887657
Alignment:
Q  48 taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||| |||| ||| |||||| ||| |||||| | || | ||||||||| ||| |||||| |||||||||    
T  16887581 taaactcacacataactgtgaagtctcgagtttgaacccagatcacgacgtccggctttgtaatttctgcatttgtc 16887657  T

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Target: scaffold0032 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 56598 - 56505
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  56598 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccgaccttgcaatttcggcatttg 56505  T

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Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 44084057 - 44083964
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  44084057 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggcatttg 44083964  T

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Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 2146753 - 2146661
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  2146753 agtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtccggccttgcaatttcggcattt 2146661  T

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Target: chr7; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 4106855 - 4106762
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  4106855 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 4106762  T

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Target: chr7; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 4107426 - 4107333
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  4107426 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcgtgacgtccggccttgcaatttcggcatttg 4107333  T

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Target: chr7; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 40058355 - 40058262
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  40058355 agtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggcatttg 40058262  T

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Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 23358302 - 23358209
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  | |||||||||||||||||||||| |||||    
T  23358302 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcggtatttg 23358209  T

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Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 31770543 - 31770636
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   || |||||||||||||||||||||||||    
T  31770543 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacatccggccttgcaatttcggcatttg 31770636  T

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Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 47570729 - 47570817
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 117  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||   |||||||||||||||||||||||    
T  47570729 agtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 47570817  T

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Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 8439195 - 8439102
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||||||| |||||||||||| |||||||  ||||||||| ||||||| ||||||||| ||||||||||| ||||||||    
T  8439195 agtggtaatccactgaaaataaattcacacacaactgtgaggtcctgggttcgaatccgggtcacaacgtccgaccttgcaattttggcatttg 8439102  T

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Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 47250262 - 47250355
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||||||||||||||||||||  ||| || | ||||||||||||||||   ||||||||||||||||||||||||||||    
T  47250262 agtggtaatccactgaaaataaactcacacacaactaagagatcccaggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 47250355  T

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Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 25546286 - 25546378
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||   |||||||||||||||||||||||||||    
T  25546286 agtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccggccttgcaatttcggcattt 25546378  T

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Target: chr7; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 27229488 - 27229584
Alignment:
Q  29 agtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||| |||| | ||||||||||||||||||||| ||||||||    
T  27229488 agtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcgacatttgtc 27229584  T

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Target: chr7; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 7162801 - 7162892
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||  | | ||||||| || ||||||||||||||| |||||||||||||| |||||||||||||||    
T  7162801 agtggtaatccactgaaaataaactcacaca--attgtgaggtcccgagttcgaacccgggtcacaacgtccggccttacaatttcggcatttg 7162892  T

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Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 5772830 - 5772923
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| ||  ||||| ||||||||||||||||||||    
T  5772830 agtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcacattgtccgaccttgcaatttcggcatttg 5772923  T

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Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 25112258 - 25112351
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||   ||||||| |||||||||||||| |||||    
T  25112258 agtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccgaccttgcaatttcggtatttg 25112351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 38781219 - 38781304
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| | || | |||||||||||||||    
T  38781219 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacgacattcggccttgcaatttc 38781304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 41183932 - 41183839
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||| |||||||||||||||||||||||||| |||| |||||| | |||||||||||| ||||   ||||||||||||||||||||||||||||    
T  41183932 agtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacccaggtcaagacgtccggccttgcaatttcggcatttg 41183839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 11355940 - 11355846
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgt 123  Q
    |||||||||||||||||| ||||||||||||||||| |||| || |||||||||| || | ||  |||||||| |||||||||||||||||||||    
T  11355940 agtggtaatccactgaaattaaactcacacacaactgtgagatcccgggttcgaatccagatcataacgtccgaccttgcaatttcggcatttgt 11355846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 43753764 - 43753858
Alignment:
Q  29 agtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||| |||| |||||| |||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  43753764 agtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccggccttgcaatttcggcatttg 43753858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 38033846 - 38033753
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||| |||||||||||||||||||||||||||| ||||||| ||| || |||||||| || ||| ||||| |||| |||||||||||||||    
T  38033846 agtggtactccactgaaaataaactcacacacaactgtgaggtcccggatttgaacccggatcacaatgtccgaccttacaatttcggcatttg 38033753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 48146870 - 48146778
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||| | || || | |||||||||||| ||||||    
T  48146870 agtggtaatccaatgaaaattaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacatctgaccttgcaatttctgcattt 48146778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 43203417 - 43203330
Alignment:
Q  35 aatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||| |||||||||||||||||||| | ||||| |||||||||||||||||| |  ||||| ||||| |||||||||||||||    
T  43203417 aatccactgtaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacggcgtcccgccttacaatttcggcatttg 43203330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 39513994 - 39514080
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 115  Q
    ||||||||||||| |||| |||||||||||| |||| | ||||| ||||||||||| |||||| | |||||||||||||||||||||    
T  39513994 agtggtaatccaccgaaattaaactcacacataactgtaaggtcccgggttcgaactcgggtcacgacgtccggccttgcaatttcg 39514080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 28603128 - 28603035
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||| | |||||||||| |||| | ||| ||||||||||||||| | |||| | |||||||||||||| |||||||||||||    
T  28603128 agtggtaatccactgagattaaactcacatacaattgtgaagtctcgggttcgaactcaggtcacgacgtccggccttgcgatttcggcatttg 28603035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 32606343 - 32606436
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||| |||||||| |||| ||||| | |||| | |||||||||||||||||| ||||| | |||||||||||||||||||||| |||||||    
T  32606343 tggtaattcactgaaattaaattcacataaaactgtaaggtctcgggttcgaacctgggtcacgacgtccggccttgcaatttcggtatttgtc 32606436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 15634890 - 15634983
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||  ||| |||||| ||||||| | ||||||| | || |||||||||||||||    
T  15634890 agtggtaatctactgaaaataaactcacacacaactgtgaagttccggtttcgaatccgggtcacgacgtccgactttacaatttcggcatttg 15634983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 29484766 - 29484859
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||| ||||||||||||| |||||||||| |||| | ||||||| ||||||| ||||| | ||   ||||||||||||||||||||||||||||    
T  29484766 agtgataatccactgaaattaaactcacatacaattgtgaggtcccgggttcaaacccagatcatgacgtccggccttgcaatttcggcatttg 29484859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 47557898 - 47557806
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||| ||||||||| |||||||||| |||||| ||||||  ||||||||||||||||||   |||| || ||||| |||||||||||||    
T  47557898 agtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaacccgggtcatgacgtgcgaccttgtaatttcggcattt 47557806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 5587397 - 5587302
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||| ||| |||||||||||  || | |||||||  |||||||||||||| || | | |||||| |||||||||||||||||||||    
T  5587397 agtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatttcggcatttgtc 5587302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 5592358 - 5592263
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||| ||| |||||||||||  || | |||||||  |||||||||||||| || | | |||||| |||||||||||||||||||||    
T  5592358 agtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatttcggcatttgtc 5592263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 43170951 - 43171045
Alignment:
Q  30 gtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||| ||||| |||||||||| ||||||  || ||||| | || ||||| ||||  | ||||||||||||||||||||||||||||||    
T  43170951 gtggtaatccattgaaattaaactcacatacaactgggaagtctccgatttgaacctgggttacgacgtccggccttgcaatttcggcatttgtc 43171045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 13887282 - 13887195
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||| |||||||| |||  ||| ||||||  |||||||||||| ||||| | |||||||| ||||||| |||||||||||    
T  13887282 gtaatccactgaaattaaactcataca--actgtgaggttccgggttcgaacctgggtcacgacgtccggtcttgcaagttcggcatttg 13887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 34763559 - 34763510
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 78  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  34763559 agtggtaatccactgaaattaaactcacacacaactgtgaggtcccgggt 34763510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 19630679 - 19630714
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaact 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  19630679 agtggtaatccactgaaaataaactcacacacaact 19630714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 42081630 - 42081720
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||| |||||||||||||||  ||||||||| ||||||| | ||||||||||||| || |||||| ||  |||||||||| | ||||||    
T  42081630 agtggtaattcactgaaaataaact--cacacaactgtgaggtc-caggttcgaacccggatcacaacgttcgatcttgcaattttgacatttg 42081720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 4001855 - 4001945
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||| ||| ||||| ||||||||||||   ||  |||||| || ||||||||||||||| | || |||||||||||||||||| |||||    
T  4001855 agtggtaaaccattgaaattaaactcacacag--ctgagaggtcccgagttcgaacccgggtcacgacatccggccttgcaatttcgacattt 4001945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 47960979 - 47961059
Alignment:
Q  42 tgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||| |||||||||||||||||  |||||| ||||||||||||||| ||   ||||| | ||||| ||||| ||||||||    
T  47960979 tgaaattaaactcacacacaactacgaggtcccgggttcgaacccggttcatgacgtctgaccttgtaattttggcatttg 47961059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 48444163 - 48444255
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||| |||||||| |||||| |||||||||| ||| ||   |||||||||||| | || | |||||| | ||| ||||||||||||||    
T  48444163 agtggtaattcactgaaattaaacttacacacaactgtgaagtacagggttcgaacccagatcacgacgtccagtcttacaatttcggcattt 48444255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 10220485 - 10220540
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 86  Q
    |||||| ||||||||| |||||||||||| |||| |||||| |||| |||||||||    
T  10220485 tggtaaaccactgaaattaaactcacacaaaactgtgaggtttcggattcgaaccc 10220540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 35577891 - 35577949
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc 91  Q
    |||||||| ||||| |||||| |||||||| | ||| ||||||||||||||| ||||||    
T  35577891 gtaatccattgaaattaaacttacacacaattgtgaagtctcgggttcgaactcgggtc 35577949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 27915591 - 27915684
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccg-ggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||| || ||||| |||||||| |||||||| |||| |||  ||||||||| |  |||| | ||||||| |||||||||||| ||||||    
T  27915591 agtggtaattcattgaaattaaactcatacacaactgtgagatcttaggttcgaactcaaggtcacgacgtccgaccttgcaatttcagcattt 27915684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 5462969 - 5463045
Alignment:
Q  37 tccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaattt 113  Q
    |||| ||||| ||||||||||||||||| |||| |||| |||||||| |||| || |||| |||  | |||||||||    
T  5462969 tccattgaaattaaactcacacacaactgtgagatctcaggttcgaatccggatcacaacatccaacattgcaattt 5463045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 18506290 - 18506341
Alignment:
Q  32 ggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 84  Q
    ||||| ||||||||| ||||||||||||| ||| ||| |||||||||||||||    
T  18506290 ggtaaaccactgaaattaaactcacacac-actgtgaagtctcgggttcgaac 18506341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 40643052 - 40642996
Alignment:
Q  68 aggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||| |||||||| || ||| ||| |||||| |||||||| ||||||||    
T  40643052 aggtctcgggtttgaacccggatcacaatgtctggccttacaatttcgacatttgtc 40642996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 26605741 - 26605648
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26605741 agtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttg 26605648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 34460486 - 34460391
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34460486 agtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttgtc 34460391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 10639617 - 10639710
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  10639617 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 10639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 33083565 - 33083658
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  33083565 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 33083658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 37197621 - 37197714
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||| |||||||||||||||||||||    
T  37197621 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccagccttgcaatttcggcatttg 37197714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 11708795 - 11708702
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  11708795 agtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttacaatttcggcatttg 11708702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 19537424 - 19537331
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||| ||||||||||| ||||||  ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  19537424 agtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtccggccttgcaatttcggcatttg 19537331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 23839976 - 23839883
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  23839976 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtccggccttgcaattttggcatttg 23839883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 11459832 - 11459739
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||   ||||||| ||||||||||||||||||||    
T  11459832 agtggtaatccattgaaaataaacacacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccgaccttgcaatttcggcatttg 11459739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 29659229 - 29659322
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| || ||||||| |||||| ||||||||    
T  29659229 agtggtaatccactgaaaataaactcacacacaactgtgaggtcatgggttcgaacccgggtcacaatgttcggccttacaattttggcatttg 29659322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 45125176 - 45125269
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||  ||| |||||||||||||| |||||||||||||||    
T  45125176 agtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtccggccttacaatttcggcatttg 45125269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 19048871 - 19048778
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||   |||||||||||| |||||||||||||||    
T  19048871 agtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggcatttg 19048778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 19816333 - 19816244
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||| |||||||||||||||| ||||||||  |||||  ||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  19816333 gtaatctactgaaaataaactcatacacaactgcgaggttccgggttcaaacccgggtcacaacgtccggccttgcaatttcggtatttg 19816244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 39535545 - 39535638
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||| || ||| |||||||||| | |||| ||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||||    
T  39535545 agtggtaatccgctcaaattaaactcacataaaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcgacatttg 39535638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 38440208 - 38440303
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||| ||| |||||||||||| | ||  |||||||| |||||| | ||||||| | ||||||||||||||||||||||||||||||    
T  38440208 agtggtaatccactaaaattaaactcacacatagctaggaggtctcaggttcggatccgggtcacgacgtccggccttgcaatttcggcatttgtc 38440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 11816561 - 11816655
Alignment:
Q  29 agtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||| |||| |||||| |||||| ||||||  ||||||||||||| |||| | ||||||| ||||||||||||||||||||    
T  11816561 agtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccgaccttgcaatttcggcatttg 11816655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 4851437 - 4851348
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 118  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||| |||||| |||||||| || | ||||||||| || |||||||||||    
T  4851437 agtggtaatccactaaaattaaactcacacacaactgtgaggtcccgggtttgaacccggatcacgacgtccggctttacaatttcggca 4851348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 15782706 - 15782612
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||| ||||||||| ||||||| |||||| || | ||||||||||||||||||||||||   ||||||| |||| |||||||||||||||||    
T  15782706 agtggtaaaccactgaaattaaactcccacaca-ctgtaaggtctcgggttcgaacccgggtcatgacgtccgaccttacaatttcggcatttgtc 15782612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 40786220 - 40786315
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||| |||| |||| ||| ||||||||||| |||||  |||||||  |||||||||| ||||| | ||||||||||||||||||||||||||||||    
T  40786220 agtgataattcactaaaattaaactcacactcaactgcgaggtcttaggttcgaaccagggtcacgacgtccggccttgcaatttcggcatttgtc 40786315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 43778479 - 43778574
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||  ||||||||||| |||| | || | |||| |||||||||||| |||||||    
T  43778479 agtggtaatccaatgaaaataaactcacacacaactgtgaagtcttaggttcgaacccaggtcacgacattcggctttgcaatttcggtatttgtc 43778574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 16654470 - 16654388
Alignment:
Q  39 cactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||| ||||||||||||||||||||| ||||||  ||||||||||| ||| || |  ||||||||||||||||||||||||||    
T  16654470 cactaaaaataaactcacacacaactgtgaggttccgggttcgaactcggatcacggcgtccggccttgcaatttcggcattt 16654388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 39831455 - 39831547
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||| | ||||||||||||| ||   |||||||||||||||||||||| |||||    
T  39831455 agtggtaaaccactgaaattaaactcacacacaattgtgaggtc-ccggttcgaacccggatcatgacgtccggccttgcaatttcggtatttg 39831547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 7275897 - 7275989
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||| | ||| |||| | |||||||||| ||||||| |||||||||||||||| | | || |||| |||||||||||||||||||    
T  7275897 agtggtaatccattaaaattaaatttacacacaactgtgaggtcccgggttcgaacccgggccacgacatccgaccttgcaatttcggcattt 7275989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 43684186 - 43684091
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||| |||||||||||||||||| || | || |||| |||||||||||||  |||     ||||||||||||||||||||||||||||    
T  43684186 agtggtaatccagtgaaaataaactcacacataattgtggggtcccgggttcgaacccatgtcatggtgtccggccttgcaatttcggcatttgtc 43684091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 27137929 - 27138023
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||| |||||||||| | |||| | ||||| ||||||||||||| |||| | | || ||||||| ||||||| |||||||||    
T  27137929 agtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtcacgatgttcggcctt-caatttcagcatttgtc 27138023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 34234645 - 34234554
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||| ||| ||||||| ||||||||||||  ||| ||||||||||||||| ||| | | || |||| |||| ||||||||||||||||||||    
T  34234645 agtggtgatctactgaaattaaactcacaca--actatgaggtctcgggttcaaactcagatcacaacatccgaccttgcaatttcggcatttg 34234554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 42578285 - 42578243
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggt 71  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  42578285 agtggtaatccactgaaaataaactcacacacaactgtgaggt 42578243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 7349215 - 7349122
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||| ||||||| ||| |||||||||||| |  | ||||||||||| ||||||| ||| || | ||||||||||||||||| || |||||||    
T  7349215 agtggtgatccactaaaattaaactcacacatagttgtgaggtctcggattcgaactcggatcacgacgtccggccttgcaatatcagcatttg 7349122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 44181898 - 44181993
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||| ||||||||||||||||||||||||||||||| |||| || ||| |||||| ||   || |||| | || |||| ||||||| |||||||||    
T  44181898 agtgataatccactgaaaataaactcacacacaactgtgagatcccggattcgaatccaaatcacaacattcgaccttacaatttcagcatttgtc 44181993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 4800993 - 4800900
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||| ||||| || |||||||||||| |||   |||||  ||||||||||| | |||| | |||||| |||||||||||||| ||||||    
T  4800993 agtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaactcaggtcacgacgtccagccttgcaatttcgacatttg 4800900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 38400567 - 38400494
Alignment:
Q  48 taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||| ||||||||| |||||||  || ||||||||| |||| | |||||||  ||||||||||||||||||    
T  38400567 taaactcgcacacaactatgaggtcctggattcgaaccctggtcacgacgtccgatcttgcaatttcggcattt 38400494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 15072204 - 15072115
Alignment:
Q  34 taatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||||| ||||| ||||||||| | ||||||| |||||||||| |||| || | || ||| || |||||||||||  |||||||    
T  15072204 taatccactgaaattaaacacacacacaa-tatgaggtcccgggttcgaatccggatcacgacatccagctttgcaatttcgatatttgtc 15072115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 15344978 - 15345016
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgag 69  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  15344978 tggtgatccactgaaaataaattcacacacaactctgag 15345016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 40825169 - 40825231
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc 91  Q
    |||| ||||||| |||||||||||||||||||| ||   || |||||| ||||||||||||||    
T  40825169 agtgataatccattgaaaataaactcacacacacctggaagatctcggattcgaacccgggtc 40825231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 33564945 - 33565010
Alignment:
Q  56 cacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||| | ||||||||||||||||||  |||| | |||||| ||||| |||||||| |||||    
T  33564945 cacacaactataaggtctcgggttcgaacctaggtcacgacgtccagccttacaatttcgacattt 33565010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 6055019 - 6055111
Alignment:
Q  32 ggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||| ||| |||||||||||||| || |||||||  | ||||||| |||  |  | |||| || ||||||||||| ||||||||||    
T  6055019 ggtaatccactaaaattaaactcacacacagctatgaggtcctgagttcgaatccgaattacgacgttcgaccttgcaattttggcatttgtc 6055111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 25501839 - 25501887
Alignment:
Q  74 cgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||  |||| | |||||||||||||||||||| |||||||    
T  25501839 cgggttcgaacctaggtcacgacgtccggccttgcaatttcagcatttg 25501887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 42025788 - 42025692
Alignment:
Q  29 agtggtaatccactgaaaataa-actcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||| |||||||||| ||| |||||||||||| | ||||||   |||||||||| | |||| | || |||||||||  ||||||| ||||||||    
T  42025788 agtggtagtccactgaaattaagactcacacacaattgtgaggttctgggttcgaactcaggtcacgacatccggccttaaaatttcgacatttgtc 42025692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 873 - 966
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  873 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 13962 - 14055
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||    
T  13962 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcggtatttg 14055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 19642 - 19735
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||    
T  19642 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcggtatttg 19735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 9984 - 10077
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  | ||||||||||||||||||||||||||||    
T  9984 agtggtaatccactgaaaataaactcacacacaactatgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcggcatttg 10077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 9e-34; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 33704333 - 33704240
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  33704333 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 33704240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 33621611 - 33621518
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  33621611 agtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 33621518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 21037407 - 21037315
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| ||| |||||||||| ||| |||||||||||||||||||||| |||||||    
T  21037407 agtggtaattcactgaaaataaactcacacacaactgtgaggtc-cggattcgaacccgagtcacaacgtccggccttgcaatttcagcatttg 21037315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 4464244 - 4464149
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||| | ||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  4464244 agtggtaaaccactgaaattaaactcacacacaactgtgaggtcccaggttcgaacccggatcatgacgtccggccttgcaatttcggcatttgtc 4464149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 28323049 - 28322956
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||   |||||||||||| |||||||||||||||    
T  28323049 agtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggcatttg 28322956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 11572110 - 11572031
Alignment:
Q  44 aaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgt 123  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||| | ||||| |||||| ||||||| ||||||||    
T  11572110 aaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtctggccttacaatttctgcatttgt 11572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 2959266 - 2959173
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||   ||| | |  |||||||||||||||||||||||||    
T  2959266 agtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaacctaagtcacgatatccggccttgcaatttcggcatttg 2959173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 21000809 - 21000716
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||| ||||||||| | ||||||| ||||||||||||| ||||   |||| |||||||||||||||||||||||    
T  21000809 agtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtcatgacgtacggccttgcaatttcggcatttg 21000716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 16518536 - 16518448
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||||||||||||||||||||  ||| |||| ||  |||||||||||| |||| ||||||||| ||||||||||| |||||||    
T  16518536 tggtaatccactgaaaataaactcacaca--actgtgagctcctgggttcgaacccaggtcacaacgtccgaccttgcaattttggcattt 16518448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 19145587 - 19145495
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||| |||| |||||||||| | ||||||| ||||||| ||  |||||| | |||||||||||||||||||| |||||||    
T  19145587 agtggtaatccactgaaattaaattcacacacaattgtgaggtcccgggttc-aaaacgggtcacgacgtccggccttgcaatttcagcatttg 19145495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 29009661 - 29009758
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtccg 126  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||| | ||||||||  ||||||   |||||||||||| ||| ||| |||||||||||    
T  29009661 agtggtaattcactaaaaataaactcacacacaactgtgaggtcccaggttcgaattcgggtcatgacgtccggccttacaacttcagcatttgtccg 29009758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 32289462 - 32289370
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||| |||||| |||||||| |||||||||| |||||||||| |||||||  ||| || |||| |||||| ||||||||||||||||||    
T  32289462 agtggtaattcactgataataaacttacacacaactgtgaggtctcgagttcgaattcggatcacaacatccggc-ttgcaatttcggcatttg 32289370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 12252140 - 12252045
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||| ||| | ||| ||||||||||||||||| ||||||||||||||| ||||| |||| | || ||||| |||||||| |||| |||||||    
T  12252140 agtggtaagccattaaaattaaactcacacacaactatgaggtctcgggttcaaaccctggtcacgacatccggtcttgcaatctcggtatttgtc 12252045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 24619090 - 24619185
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||| ||||||| ||||||||||||||| | ||||||| |||| |||||| |||||| | |||| ||||||| |||||| | ||||||||    
T  24619090 agtggtaatcgactgaaattaaactcacacacaattatgaggtcacgggatcgaactcgggtcacgacgttcggccttacaattttgacatttgtc 24619185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 361128 - 361035
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||| ||||||||||||| |||||||||| | |||| ||||||  |||||||||||||| ||| | | || |||||||||||||| ||||||||    
T  361128 agtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaacccgtgtcacgatgttcggccttgcaattttggcatttg 361035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 35218651 - 35218700
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 78  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  35218651 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 35218700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 10999419 - 10999514
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||| |||||||||| |||||| |||| | | || |||| ||| || || |  |||||| ||||||| ||||||||||||||    
T  10999419 agtggtaatccactgaaattaaactcacatacaactgtgagattttggattcgtacctggatcacttcgtccgaccttgcagtttcggcatttgtc 10999514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 28592141 - 28592188
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 78  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  28592141 tggtaatccattgaaaataaactcacacacaactgtgaggtcttgggt 28592188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 32353954 - 32354046
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||| | ||||||||||||||||||||||| ||| ||| |  ||||||| ||| ||| ||||||||| ||||  ||||| ||||||||||    
T  32353954 tggtaatcaattgaaaataaactcacacacaactgtgaagtc-ccagttcgaatccgagtcacaacgtccgacctttgaattttggcatttgtc 32354046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 584795 - 584887
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||| ||||| ||||||  ||||||||| | || | ||||||| ||  |||||| ||||||| | ||||||| ||||||||||||||||||||    
T  584795 agtggcaatcctctgaaatcaaactcacataaaattgtgaggtcccgaattcgaatccgggtcacgacgtccg-ccttgcaatttcggcatttg 584887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 9e-34; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 13204074 - 13203981
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  13204074 agtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcggcatttg 13203981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 21018340 - 21018247
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  21018340 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggcctcgcaattttggcatttg 21018247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 4824950 - 4825043
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  4824950 agtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggtttgaacctgggtcacaacgtccggccttgcaatttcggcatttg 4825043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 35317708 - 35317801
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||  |||||||| ||||||||||||||||||||    
T  35317708 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtccgaccttgcaatttcggcatttg 35317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 31909396 - 31909486
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcat 119  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||| |||||||||||||| ||||    
T  31909396 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtctggccttgcaatttcagcat 31909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 6021109 - 6021016
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||||||||||||||||||||  |||||| |||||||||| ||||||| ||||||| ||||||||||||| | ||||||    
T  6021109 agtggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaatccgggtcacaacgtcaggccttgcaattttgacatttg 6021016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 12257473 - 12257380
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||| | |||||||  |||||||||||| |||| ||||||| |||||| |||||||||||||||    
T  12257473 agtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacccaggtcacaacgtctggccttacaatttcggcatttg 12257380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 2971101 - 2971009
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| | |||| |||||||| |||||    
T  2971101 agtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtcacaacgtctgaccttacaatttcgacattt 2971009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 29265992 - 29265900
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||| | || ||||| ||||||| |||||    
T  29265992 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacaacattcgaccttgtaatttcgacattt 29265900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 40177741 - 40177646
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||||||||||||||||||||  ||| ||  |||||| ||| || |||| ||||||||||||||||||||||| ||||||||    
T  40177741 agtggtaatccactgaaaataaactcacacacaacggtgaagttccgggttggaatccaggtcacaacgtccggccttgcaatttcgacatttgtc 40177646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 1191555 - 1191644
Alignment:
Q  33 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| || | ||||||||||||||||||||| ||||||    
T  1191555 gtaagccactgaaattaaactcacacacaattgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgtcatttg 1191644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 27721548 - 27721456
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||||||||| |||| ||||| |||||| ||||||| ||||||| |||||||||| | ||||||| | |||||||||||||||||    
T  27721548 agtggtaatccactgaaattaaattcacatacaactgtgaggtcccgggttcaaacccgggtcacgacgtccgactttgcaatttcggcattt 27721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 21112165 - 21112071
Alignment:
Q  30 gtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||  |||| | ||||  | ||||||||||||| ||||||||    
T  21112165 gtggtaatccactgaaaataaactcaaacacaactttgaggtcccaggttcgaacctaggtcacgacgtatgtccttgcaatttcgacatttgtc 21112071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 3386904 - 3387004
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggt-----ct--cgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||||||||| |||| |||||||||||| ||||||     ||  ||||||||||||||| |  | |||||||||||||||||||||||||||    
T  3386904 agtggtaatccactgaaattaaattcacacacaactttgaggttccgacttccgggttcgaacccggataacgacgtccggccttgcaatttcggcattt 3387003  T
Q  122 g 122  Q
    |    
T  3387004 g 3387004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 28591361 - 28591446
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 114  Q
    |||||||| ||||||| | |||||||| |||||||| |||||| || |||| ||||||| ||| | ||||||||||||||||||||    
T  28591361 agtggtaaaccactgacattaaactcatacacaactgtgaggtttcaggtttgaacccgagtcactacgtccggccttgcaatttc 28591446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 32143425 - 32143474
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 78  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  32143425 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 32143474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 14270641 - 14270546
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||| |||||||||||||||||||| | |||||||| |||| ||||||||| |||  |||||| | |||||||   || |||||||||||||||||    
T  14270641 agtgataatccactgaaaataaacttaaacacaactatgagatctcgggttggaatacgggtcacgacgtccgatttttcaatttcggcatttgtc 14270546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 23262661 - 23262573
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||||||||||||||||||||||||||| | ||||    |||||||||    ||| |||| ||| ||||||||||||||||||||    
T  23262661 agtggtaatccactgaaaataaactcacacacaactgtaaggttctaggttcgaac----gtcacaacatccagccttgcaatttcggcattt 23262573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 8734114 - 8734020
Alignment:
Q  29 agtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||  |||| |||||  |||||| ||||||  ||||||||||||  |||| | |||||||||||||||||||| |||||||    
T  8734114 agtggtaatccactgaagttaaaactcacgtacaactgtgaggttccgggttcgaacctaggtcacgacgtccggccttgcaatttcagcatttg 8734020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 9576985 - 9577065
Alignment:
Q  42 tgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||| |||||||||| |||||| ||||||   |||||||||||| ||||   ||||| |||||||||||||| |||||||    
T  9576985 tgaaattaaactcacatacaactgtgaggttctgggttcgaacccaggtcatgacgtctggccttgcaatttcagcatttg 9577065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 35546050 - 35545955
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||| ||||||||| ||| ||||| |||| |||||| ||||||| | ||||||||  ||| || | |||| |||  ||||||||||||||||||||    
T  35546050 agtgataatccacttaaattaaacccacatacaactgtgaggtcccaggttcgaattcggatcacgacgttcggttttgcaatttcggcatttgtc 35545955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 17984753 - 17984811
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccg 87  Q
    |||| ||| ||||| ||| ||||||||||||||||| ||||||  ||||||||||||||    
T  17984753 agtgataagccactaaaattaaactcacacacaactgtgaggttccgggttcgaacccg 17984811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 2756027 - 2755950
Alignment:
Q  44 aaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||| |||||||||||   |||||||| |||| || | || || | |||| ||||||||||||||||||||||    
T  2756027 aaaataaacccacacacaactgctaggtctcgagttcaaaactggatcaccacgttcggccttgcaatttcggcattt 2755950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 2786387 - 2786295
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||  |||||||| |||||||| ||||||| | |||| |||  ||| || |  |||||| |||| |||||||||||||||    
T  2786387 agtggtaatccactgaat-taaactcatacacaactgtgaggtcccaggtttgaattcggatcacggcgtccgaccttacaatttcggcatttg 2786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 3049094 - 3049159
Alignment:
Q  58 cacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgt 123  Q
    ||||||| ||||||| |||||| |||  |||||| |  |||||||||||||||||| |||||||||    
T  3049094 cacaactgtgaggtcccgggtttgaaatcgggtcacggcgtccggccttgcaattttggcatttgt 3049159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 30127960 - 30127919
Alignment:
Q  80 cgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||||||| | | |||||||||||||||||||||||||    
T  30127960 cgaacccgggtcacgatgtccggccttgcaatttcggcattt 30127919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 9e-34; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 7824465 - 7824558
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  7824465 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 7824558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 29689493 - 29689586
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  29689493 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 29689586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 43247661 - 43247754
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  43247661 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtccggccttgcaattttggcatttg 43247754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 9349687 - 9349780
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || | ||||||| ||||||||||||||||||||    
T  9349687 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccgaccttgcaatttcggcatttg 9349780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 54151692 - 54151785
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  54151692 agtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 54151785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 54158383 - 54158290
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||||    
T  54158383 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcggcatttg 54158290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 55018045 - 55018138
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| | ||||||    
T  55018045 agtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttgacatttg 55018138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 28844622 - 28844526
Alignment:
Q  29 agtggtaatccactgaaaa-taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28844622 agtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttgtc 28844526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 4601540 - 4601449
Alignment:
Q  31 tggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||   ||||||||||||||||||||||||||||    
T  4601540 tggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttg 4601449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 3113006 - 3113099
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||  | ||||||||||||||||||||||||||||    
T  3113006 agtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggttacgacgtccggccttgcaatttcggcatttg 3113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 36229005 - 36229098
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||||    
T  36229005 agtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcggcatttg 36229098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 51665936 - 51666029
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||   ||||||||||||||||||||||||||||    
T  51665936 agtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcggcatttg 51666029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 1778968 - 1778873
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||| |||||||||| ||| |||||| | ||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  1778968 agtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaatgtccggccttgcaatttcggcatttgtc 1778873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 35461495 - 35461583
Alignment:
Q  34 taatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    ||||| || |||||||||||||||||||||| ||||||  ||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  35461495 taatctacagaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtccgaccttgcaatttcggcatttg 35461583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 33334725 - 33334632
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||| ||||| ||||||| ||||||||||||||||| ||||||| ||| ||||||| | |||| ||||||||||| ||||||||||||||||||    
T  33334725 agtgataatctactgaaattaaactcacacacaactgtgaggtcccggattcgaactcaggtcacaacgtccggctttgcaatttcggcatttg 33334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 52500955 - 52500862
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||| ||||||||||||||||||||||||| |||||| || ||||||||||||| ||   |||||||||||| |||||||| ||||||    
T  52500955 agtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaacccggatcatgacgtccggccttacaatttcgacatttg 52500862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 42392816 - 42392909
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||| ||||| ||   ||||||| ||||||||||||||||||||    
T  42392816 agtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgggttcgagcccggatcatgacgtccgaccttgcaatttcggcatttg 42392909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 38257314 - 38257400
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 115  Q
    ||||||||||| |||||| ||||||||||||||| | ||||||   |||||||||||| |||| | ||||||| |||||||||||||    
T  38257314 agtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtccgaccttgcaatttcg 38257400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 29750737 - 29750645
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||  ||| ||||| ||||| | |||||||||  ||||||| ||||||| | |||||| |||||||||||||||||||||    
T  29750737 agtggtaatccactgaatttaa-ctcacgcacaaatgtgaggtctctagttcgaatccgggtcacgacgtccagccttgcaatttcggcatttg 29750645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 32001435 - 32001527
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||  |||||||||||||||||||||||||| |||| ||||| ||||||||| || ||   | || ||||||| ||||||||||||||    
T  32001435 agtggtaaatcactgaaaataaactcacacacaactgtgagatctcgagttcgaacctggttcaagatgttcggccttacaatttcggcattt 32001527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 7958686 - 7958627
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgg 88  Q
    |||||||||||||| |||||||||| ||||| |||| ||||||| |||||||||||||||    
T  7958686 agtggtaatccactaaaaataaacttacacataactgtgaggtcccgggttcgaacccgg 7958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 55320411 - 55320454
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtc 72  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  55320411 agtggtaatccactgaaaataaactcacacacaactatgaggtc 55320454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 8151462 - 8151373
Alignment:
Q  32 ggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||| ||||| |||||| ||||| |||| |||| |||||||||||||||||| || | |||| || | |||||||||| ||||||    
T  8151462 ggtaatccattgaaattaaactgacacataactgtgagatctcgggttcgaacccggatcacgacgttcgtctttgcaatttcagcattt 8151373  T

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Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 40756738 - 40756831
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc-tcaacgtccggccttgcaatttcggcattt 121  Q
    |||||||| | ||||||| ||||||||||| ||||| |||||||||||||||||| |||| || | | |||| | ||||||||||| |||||||    
T  40756738 agtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaatccggatcatgatcgtctgaccttgcaattttggcattt 40756831  T

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Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 43775340 - 43775247
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||| |||||||| | |||||| |||| |  ||| ||||||| |  ||| ||||||||| |||| |||||||||||||||    
T  43775340 agtggtaatccactgaaattaaactcaaatacaactgtgagattccggattcgaacgcaagtcacaacgtccgaccttacaatttcggcatttg 43775247  T

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Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 475292 - 475383
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||| |||||||  ||||||||||||||||| ||||||  || |||||||||||| ||   ||||||| |||||||||||| ||||||    
T  475292 agtggtaattcactgaat-taaactcacacacaactgtgaggttccgagttcgaacccggatcatgacgtccgaccttgcaatttcagcattt 475383  T

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Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 448886 - 448981
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||| ||| |||||||||| |||||| |||||||   ||||||||  ||| || | |||||||||||| |||||| | ||||||||    
T  448886 agtggtaatccactaaaattaaactcacaaacaactgtgaggtcctaggttcgaattcggatcacgacgtccggccttacaattttgacatttgtc 448981  T

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Target: scaffold0053 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 22280 - 22185
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 124  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||| |||| ||||||||||||| | |||||||||||| |||||||||||||||||    
T  22280 agtggtaatccactgaaattaaactcacacgcaactgtgaggtcccgggctcgaacccgggtcacgacgtccggccttacaatttcggcatttgtc 22185  T

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Target: scaffold0038 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 114369 - 114276
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||   |||||||||||| |||||||||||||||    
T  114369 agtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggcatttg 114276  T

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Target: scaffold0067 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 34936 - 34842
Alignment:
Q  29 agtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 122  Q
    |||||||||||||||||| |||| |||||| ||||||  ||||||  || |||||||||  ||| | ||||||||||||||||||||||||||||    
T  34936 agtggtaatccactgaaattaaaactcacatacaactgcgaggtcctggattcgaacccatgtcacgacgtccggccttgcaatttcggcatttg 34842  T

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Target: scaffold0360 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 14622 - 14517
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacaca--------actctg--aggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 118  Q
    |||||||||||||||||| ||||||||||||||        ||||||  ||||| ||||||||||||||| || | ||||||||||||||||||||| ||    
T  14622 agtggtaatccactgaaattaaactcacacacacatctgtgactctgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgaca 14523  T
Q  119 tttgtc 124  Q
    ||||||    
T  14522 tttgtc 14517  T

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Target: scaffold0352 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 8954 - 9046
Alignment:
Q  29 agtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 121  Q
    ||||||||  |||||||| ||||||||||||||||| |||||||   ||||||||||||  ||  ||||||| ||||| ||||||||||||||    
T  8954 agtggtaaatcactgaaattaaactcacacacaactgtgaggtcctaggttcgaacccgaatcataacgtcccgccttacaatttcggcattt 9046  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 124
Target Start/End: Complemental strand, 50035 - 50006
Alignment:
Q  95 acgtccggccttgcaatttcggcatttgtc 124  Q
    ||||||||||||||||||||||||||||||    
T  50035 acgtccggccttgcaatttcggcatttgtc 50006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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