View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0637_high_5 (Length: 325)
Name: NF0637_high_5
Description: NF0637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0637_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 55 - 322
Target Start/End: Original strand, 29392214 - 29392469
Alignment:
| Q |
55 |
catctttaagtgagtgcgtgtgttctggtgaggtgccacggctgcaccaagaagaatcacatgagaaatgaaatttaggtaannnnnnngcaaggacaac |
154 |
Q |
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| T |
29392214 |
catctttaagtgagtgcgtgtgttctggtgaggtgccacggctgcaccaagaagaatcacatgagaaatgaaatttaggtaatttttttgcaaggacaac |
29392313 |
T |
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| Q |
155 |
ccactagcttaattatagataagtttatatgattaaa--atatgtaagtttgataaaatttattatttcatgaacttgcagcattcttttcactagctta |
252 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29392314 |
ccactagcttaattatagataagtttatatgattaaaatatatgtaagtttgataaaatttattatttcatgaacttgcagcattcttttcactagctta |
29392413 |
T |
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| Q |
253 |
tatcatttttcatatattattttaaatagagtttaagcttaaaattatagcatgtctctttttctctgct |
322 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29392414 |
tatc--------------attttaaatagagtttaagcttaaaattatagcatgtctctttttctctgct |
29392469 |
T |
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