View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0638_high_10 (Length: 228)
Name: NF0638_high_10
Description: NF0638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0638_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 4859407 - 4859258
Alignment:
| Q |
7 |
ccacctccttcctccaatagtactagatgattccaagctctaaaaaacacagaatttcaataaaattaaataacaaccttattaatagtgaattaaatca |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
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| T |
4859407 |
ccacctccttcctccaatagtactagatgattccaagctctaaaaaacacagaatttcaataaaattaaaaaacaaccttattaatagtgaattgaatca |
4859308 |
T |
|
| Q |
107 |
ttaaccaatcttcattagtattatagtactactaaaaatctatgaagcag |
156 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4859307 |
ttaaccaatcttcattagtattatagtactactaaaaatctatgaagcag |
4859258 |
T |
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