View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0638_high_12 (Length: 202)
Name: NF0638_high_12
Description: NF0638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0638_high_12 |
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Alignment Details
Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13034686 - 13034561
Alignment:
| Q |
1 |
agttttgggacatgtacatataannnnnnnngtctaatatcgatcaaatcactatcttagacggtacaatgatttgtgaacttctacttagaagaacggt |
100 |
Q |
| |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13034686 |
agttttgggacatgtacatataattttttt-gtctaatatcgatcaaatcactatcttagacggtacaatgatttgtgaacttctacttagaagaacggt |
13034588 |
T |
|
| Q |
101 |
gtcggtaattgaataattatattgttg |
127 |
Q |
| |
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||||||||||||||||||||||||||| |
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|
| T |
13034587 |
gtcggtaattgaataattatattgttg |
13034561 |
T |
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