View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0638_low_11 (Length: 279)

Name: NF0638_low_11
Description: NF0638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0638_low_11
NF0638_low_11
[»] chr4 (58 HSPs)
chr4 (1-125)||(4268892-4269017)
chr4 (1-126)||(789600-789726)
chr4 (1-119)||(15186240-15186359)
chr4 (1-118)||(43944505-43944623)
chr4 (1-118)||(16536046-16536164)
chr4 (1-117)||(4089141-4089258)
chr4 (1-117)||(18067949-18068066)
chr4 (2-118)||(43202454-43202571)
chr4 (1-120)||(7768934-7769054)
chr4 (1-122)||(47231942-47232064)
chr4 (2-116)||(32217045-32217160)
chr4 (1-115)||(19503175-19503289)
chr4 (1-118)||(37987934-37988051)
chr4 (1-120)||(29591185-29591305)
chr4 (1-116)||(54897308-54897424)
chr4 (1-116)||(28755621-28755736)
chr4 (1-118)||(12356242-12356360)
chr4 (1-116)||(32202550-32202666)
chr4 (1-116)||(24679712-24679827)
chr4 (1-87)||(39843937-39844023)
chr4 (1-117)||(42898816-42898933)
chr4 (1-113)||(42815113-42815225)
chr4 (2-124)||(55882676-55882798)
chr4 (1-124)||(50619078-50619202)
chr4 (1-116)||(54054548-54054664)
chr4 (1-93)||(54945848-54945940)
chr4 (6-124)||(4220187-4220306)
chr4 (1-118)||(46688275-46688398)
chr4 (6-93)||(54655951-54656038)
chr4 (1-118)||(33108743-33108860)
chr4 (1-118)||(46148939-46149055)
chr4 (2-90)||(50603254-50603342)
chr4 (2-116)||(3783572-3783687)
chr4 (2-77)||(36395139-36395214)
chr4 (1-119)||(52533855-52533974)
chr4 (1-126)||(6164084-6164209)
chr4 (1-118)||(31680533-31680650)
chr4 (1-117)||(49915158-49915275)
chr4 (1-77)||(30154233-30154309)
chr4 (1-67)||(30387204-30387270)
chr4 (116-166)||(48600890-48600940)
chr4 (21-124)||(50167583-50167685)
chr4 (2-129)||(41265446-41265573)
chr4 (1-118)||(5091680-5091798)
chr4 (8-90)||(53655955-53656037)
chr4 (1-53)||(39877319-39877371)
chr4 (8-86)||(52697083-52697160)
chr4 (58-124)||(22225872-22225940)
chr4 (6-73)||(53268764-53268830)
chr4 (42-92)||(1432653-1432703)
chr4 (8-62)||(31517220-31517274)
chr4 (58-116)||(39877554-39877612)
chr4 (80-129)||(43202371-43202420)
chr4 (64-117)||(55594130-55594183)
chr4 (68-119)||(8133731-8133782)
chr4 (64-119)||(34151118-34151173)
chr4 (12-57)||(16820912-16820957)
chr4 (20-73)||(17344747-17344800)
[»] chr5 (30 HSPs)
chr5 (1-116)||(34650903-34651018)
chr5 (3-116)||(35504312-35504426)
chr5 (2-119)||(35132519-35132637)
chr5 (1-119)||(13661805-13661924)
chr5 (1-118)||(8787337-8787455)
chr5 (9-118)||(10054430-10054540)
chr5 (1-116)||(12506296-12506412)
chr5 (1-116)||(21547464-21547579)
chr5 (1-116)||(10069969-10070084)
chr5 (1-123)||(13470144-13470267)
chr5 (1-119)||(31909629-31909747)
chr5 (5-118)||(4837256-4837369)
chr5 (1-116)||(11958037-11958153)
chr5 (2-116)||(9721678-9721793)
chr5 (1-118)||(19647728-19647846)
chr5 (6-116)||(6283562-6283673)
chr5 (6-117)||(40564479-40564589)
chr5 (6-115)||(20175228-20175338)
chr5 (9-113)||(11846075-11846180)
chr5 (28-118)||(39069379-39069469)
chr5 (17-115)||(2619643-2619742)
chr5 (6-90)||(39067010-39067095)
chr5 (2-98)||(40057326-40057422)
chr5 (21-127)||(19436926-19437033)
chr5 (20-90)||(6284822-6284892)
chr5 (1-117)||(10955950-10956067)
chr5 (64-122)||(21944994-21945053)
chr5 (81-117)||(36897379-36897415)
chr5 (20-59)||(4268620-4268659)
chr5 (79-118)||(16972174-16972214)
[»] chr7 (48 HSPs)
chr7 (1-116)||(24438477-24438593)
chr7 (1-123)||(24798473-24798595)
chr7 (1-117)||(5239284-5239401)
chr7 (9-124)||(34333276-34333392)
chr7 (1-117)||(27456183-27456299)
chr7 (9-122)||(29993565-29993679)
chr7 (6-115)||(28587911-28588020)
chr7 (2-116)||(8754656-8754771)
chr7 (2-120)||(34546385-34546504)
chr7 (1-117)||(47839492-47839608)
chr7 (2-93)||(30810679-30810770)
chr7 (17-118)||(12218522-12218624)
chr7 (1-118)||(18485959-18486077)
chr7 (1-116)||(34606261-34606377)
chr7 (1-116)||(43594106-43594222)
chr7 (2-120)||(4628562-4628681)
chr7 (1-88)||(45045799-45045886)
chr7 (2-113)||(11686395-11686507)
chr7 (2-97)||(42044364-42044459)
chr7 (1-122)||(23363237-23363358)
chr7 (8-118)||(5729344-5729455)
chr7 (2-115)||(47656981-47657095)
chr7 (1-117)||(37631612-37631729)
chr7 (2-118)||(18117142-18117258)
chr7 (1-123)||(28262024-28262142)
chr7 (2-119)||(7689271-7689389)
chr7 (1-116)||(1736980-1737096)
chr7 (8-116)||(13064954-13065061)
chr7 (3-128)||(18470012-18470138)
chr7 (2-123)||(37674175-37674306)
chr7 (1-90)||(525145-525234)
chr7 (8-112)||(46716642-46716747)
chr7 (1-86)||(47083086-47083171)
chr7 (2-91)||(4100595-4100684)
chr7 (20-72)||(22739868-22739920)
chr7 (1-90)||(4087650-4087738)
chr7 (2-90)||(33636479-33636567)
chr7 (2-87)||(29835775-29835860)
chr7 (20-96)||(3021912-3021988)
chr7 (26-127)||(6097325-6097429)
chr7 (1-97)||(18220602-18220697)
chr7 (2-73)||(18220742-18220812)
chr7 (2-89)||(36437405-36437491)
chr7 (1-86)||(18220509-18220593)
chr7 (81-116)||(13106466-13106501)
chr7 (64-116)||(47118097-47118150)
chr7 (48-119)||(22973595-22973667)
chr7 (39-118)||(34556998-34557078)
[»] chr6 (37 HSPs)
chr6 (1-119)||(3515763-3515882)
chr6 (1-116)||(392096-392212)
chr6 (1-118)||(4215693-4215811)
chr6 (1-117)||(27433491-27433608)
chr6 (1-116)||(21878417-21878533)
chr6 (1-120)||(18276685-18276804)
chr6 (1-119)||(32929578-32929697)
chr6 (1-118)||(20897946-20898064)
chr6 (1-118)||(34396597-34396715)
chr6 (2-119)||(3026080-3026196)
chr6 (1-116)||(12145187-12145303)
chr6 (1-119)||(12525716-12525835)
chr6 (1-118)||(7851229-7851347)
chr6 (2-123)||(1391249-1391370)
chr6 (1-124)||(23402130-23402254)
chr6 (1-117)||(29451185-29451301)
chr6 (1-114)||(2350654-2350768)
chr6 (1-117)||(31280320-31280437)
chr6 (1-100)||(34477620-34477719)
chr6 (2-116)||(29978233-29978347)
chr6 (8-116)||(2580952-2581061)
chr6 (1-113)||(32985263-32985376)
chr6 (1-93)||(26467194-26467286)
chr6 (1-116)||(23629646-23629761)
chr6 (2-129)||(35043877-35044004)
chr6 (2-124)||(25165484-25165605)
chr6 (18-117)||(13529454-13529554)
chr6 (8-112)||(34851926-34852030)
chr6 (2-93)||(13417030-13417124)
chr6 (1-101)||(1840317-1840417)
chr6 (1-124)||(5323392-5323516)
chr6 (16-92)||(11115180-11115256)
chr6 (6-116)||(28225221-28225331)
chr6 (1-114)||(9660988-9661102)
chr6 (1-75)||(961051-961125)
chr6 (23-115)||(28562682-28562774)
chr6 (46-118)||(14559920-14559993)
[»] chr3 (49 HSPs)
chr3 (1-119)||(52520678-52520797)
chr3 (9-116)||(39074419-39074527)
chr3 (1-126)||(46352624-46352750)
chr3 (1-117)||(272219-272336)
chr3 (1-116)||(43786871-43786987)
chr3 (1-116)||(53489894-53490012)
chr3 (1-126)||(41554010-41554135)
chr3 (1-117)||(49893330-49893447)
chr3 (1-116)||(20923992-20924108)
chr3 (1-116)||(48725271-48725387)
chr3 (1-118)||(858587-858705)
chr3 (2-116)||(4168183-4168298)
chr3 (1-116)||(10617354-10617469)
chr3 (1-120)||(18014668-18014788)
chr3 (1-117)||(41304004-41304119)
chr3 (2-118)||(40362651-40362768)
chr3 (1-116)||(2119431-2119547)
chr3 (2-93)||(42964320-42964411)
chr3 (6-116)||(52246582-52246693)
chr3 (1-114)||(43269809-43269923)
chr3 (2-118)||(13159895-13160012)
chr3 (1-113)||(49529336-49529451)
chr3 (2-112)||(7468417-7468526)
chr3 (5-85)||(29241669-29241749)
chr3 (8-116)||(42548096-42548204)
chr3 (1-116)||(2505350-2505465)
chr3 (2-113)||(50359257-50359368)
chr3 (9-126)||(28139299-28139417)
chr3 (2-95)||(22248908-22249001)
chr3 (1-118)||(11308280-11308398)
chr3 (9-110)||(50395640-50395742)
chr3 (1-73)||(41993689-41993761)
chr3 (1-108)||(2938110-2938217)
chr3 (2-116)||(38852216-38852332)
chr3 (32-118)||(52718166-52718252)
chr3 (1-62)||(50299015-50299076)
chr3 (1-60)||(6842676-6842735)
chr3 (37-93)||(2391631-2391687)
chr3 (37-93)||(2393392-2393448)
chr3 (1-93)||(24488390-24488482)
chr3 (2-62)||(33140940-33141000)
chr3 (6-77)||(31514831-31514902)
chr3 (57-116)||(2362801-2362861)
chr3 (2-69)||(2362880-2362946)
chr3 (38-116)||(23925280-23925359)
chr3 (18-56)||(6842604-6842642)
chr3 (26-116)||(27994394-27994486)
chr3 (20-73)||(21010041-21010092)
chr3 (4-42)||(52552549-52552587)
[»] chr8 (53 HSPs)
chr8 (1-115)||(21595848-21595962)
chr8 (1-116)||(30675642-30675758)
chr8 (1-119)||(168463-168582)
chr8 (1-122)||(12203849-12203970)
chr8 (1-122)||(12448277-12448398)
chr8 (1-115)||(16888614-16888728)
chr8 (1-124)||(33357199-33357323)
chr8 (1-118)||(4648193-4648310)
chr8 (1-118)||(27988569-27988687)
chr8 (1-118)||(28045871-28045989)
chr8 (8-119)||(13643009-13643121)
chr8 (8-119)||(13743434-13743546)
chr8 (1-118)||(4537814-4537932)
chr8 (2-116)||(37373206-37373320)
chr8 (1-118)||(16785085-16785202)
chr8 (2-117)||(11112638-11112754)
chr8 (1-116)||(34228682-34228798)
chr8 (1-117)||(36730444-36730560)
chr8 (1-114)||(20831623-20831737)
chr8 (6-118)||(9063127-9063239)
chr8 (1-116)||(16394131-16394247)
chr8 (2-121)||(29444211-29444331)
chr8 (1-117)||(3930303-3930419)
chr8 (2-117)||(43119216-43119332)
chr8 (6-103)||(42035056-42035154)
chr8 (6-125)||(40831272-40831388)
chr8 (1-116)||(2805330-2805446)
chr8 (1-122)||(16890550-16890666)
chr8 (1-126)||(7304588-7304711)
chr8 (1-116)||(32113908-32114024)
chr8 (1-93)||(22956730-22956821)
chr8 (1-93)||(28626792-28626884)
chr8 (12-118)||(9278210-9278317)
chr8 (1-98)||(9253972-9254068)
chr8 (40-116)||(12652630-12652707)
chr8 (17-89)||(9537910-9537982)
chr8 (8-77)||(34192815-34192884)
chr8 (12-118)||(10618016-10618123)
chr8 (1-116)||(10870357-10870468)
chr8 (8-116)||(29235235-29235344)
chr8 (1-124)||(17467595-17467719)
chr8 (2-73)||(42433615-42433685)
chr8 (1-54)||(39406905-39406958)
chr8 (20-62)||(22451839-22451881)
chr8 (20-62)||(30933410-30933452)
chr8 (64-116)||(39751605-39751658)
chr8 (1-45)||(24843349-24843393)
chr8 (50-116)||(36923782-36923849)
chr8 (80-110)||(27988506-27988536)
chr8 (80-110)||(28045808-28045838)
chr8 (91-128)||(18955857-18955894)
chr8 (26-116)||(29566700-29566793)
chr8 (80-124)||(16063689-16063733)
[»] chr2 (45 HSPs)
chr2 (1-117)||(6580188-6580305)
chr2 (1-113)||(4381798-4381911)
chr2 (1-124)||(561588-561712)
chr2 (1-113)||(3668183-3668295)
chr2 (1-118)||(27856466-27856584)
chr2 (1-125)||(31390003-31390128)
chr2 (1-116)||(31438646-31438762)
chr2 (1-116)||(20552931-20553047)
chr2 (2-118)||(34442603-34442719)
chr2 (1-116)||(43637165-43637280)
chr2 (1-126)||(26891733-26891859)
chr2 (1-118)||(30486208-30486326)
chr2 (2-119)||(2898069-2898186)
chr2 (1-117)||(22887749-22887866)
chr2 (1-116)||(44587902-44588018)
chr2 (1-118)||(32860100-32860218)
chr2 (1-117)||(32360939-32361056)
chr2 (2-117)||(1859161-1859277)
chr2 (1-116)||(8969477-8969591)
chr2 (6-123)||(26387139-26387257)
chr2 (1-116)||(38296178-38296293)
chr2 (1-118)||(22068390-22068507)
chr2 (2-118)||(38590945-38591062)
chr2 (8-123)||(22567595-22567711)
chr2 (2-119)||(11021293-11021410)
chr2 (1-114)||(13574099-13574211)
chr2 (1-93)||(35851821-35851913)
chr2 (1-113)||(5881221-5881337)
chr2 (1-113)||(28600971-28601082)
chr2 (9-116)||(5093617-5093724)
chr2 (6-119)||(25782908-25783018)
chr2 (1-118)||(4022549-4022666)
chr2 (1-86)||(27584769-27584854)
chr2 (2-119)||(29102354-29102471)
chr2 (1-118)||(15079029-15079145)
chr2 (1-117)||(34123095-34123211)
chr2 (20-73)||(39531868-39531921)
chr2 (39-116)||(44854310-44854387)
chr2 (8-115)||(25772112-25772220)
chr2 (79-128)||(45261891-45261942)
chr2 (39-123)||(44854448-44854533)
chr2 (82-114)||(26269987-26270019)
chr2 (43-116)||(28012066-28012140)
chr2 (39-114)||(16807332-16807409)
chr2 (39-114)||(16846613-16846690)
[»] chr1 (59 HSPs)
chr1 (2-114)||(38702004-38702117)
chr1 (2-123)||(18043155-18043277)
chr1 (1-117)||(29210412-29210529)
chr1 (1-116)||(17333352-17333467)
chr1 (1-118)||(42770060-42770178)
chr1 (1-116)||(38162850-38162966)
chr1 (1-118)||(14350347-14350465)
chr1 (2-126)||(30657598-30657723)
chr1 (1-116)||(30294451-30294567)
chr1 (1-124)||(51065818-51065942)
chr1 (1-119)||(51368855-51368974)
chr1 (1-117)||(29657770-29657887)
chr1 (2-116)||(3097659-3097774)
chr1 (1-123)||(24178533-24178656)
chr1 (1-118)||(9266798-9266916)
chr1 (2-119)||(12072133-12072251)
chr1 (1-118)||(15227737-15227855)
chr1 (1-116)||(5694321-5694437)
chr1 (1-117)||(45431278-45431394)
chr1 (1-120)||(47009989-47010109)
chr1 (1-117)||(48071482-48071598)
chr1 (1-123)||(35985691-35985813)
chr1 (1-128)||(13961200-13961327)
chr1 (6-116)||(3784788-3784899)
chr1 (1-119)||(6770334-6770453)
chr1 (1-118)||(29683193-29683312)
chr1 (1-123)||(36446395-36446517)
chr1 (1-117)||(19031885-19032002)
chr1 (1-124)||(43286714-43286838)
chr1 (2-116)||(38335170-38335284)
chr1 (1-87)||(8472984-8473070)
chr1 (17-124)||(26228187-26228293)
chr1 (1-113)||(48383181-48383294)
chr1 (1-118)||(41730303-41730424)
chr1 (8-89)||(15282591-15282672)
chr1 (43-115)||(19011108-19011180)
chr1 (8-84)||(39497340-39497416)
chr1 (5-119)||(12306915-12307029)
chr1 (2-73)||(37315339-37315409)
chr1 (8-118)||(47532748-47532857)
chr1 (1-84)||(50128242-50128325)
chr1 (2-115)||(30217763-30217877)
chr1 (1-113)||(45449314-45449426)
chr1 (17-114)||(23473550-23473648)
chr1 (20-120)||(39912368-39912469)
chr1 (17-116)||(28481844-28481940)
chr1 (20-118)||(35700739-35700836)
chr1 (9-90)||(3838856-3838936)
chr1 (9-62)||(52431636-52431688)
chr1 (33-120)||(10976004-10976092)
chr1 (20-116)||(39081803-39081898)
chr1 (20-71)||(37503260-37503311)
chr1 (39-118)||(28726013-28726094)
chr1 (6-118)||(52749600-52749713)
chr1 (21-59)||(19011057-19011095)
chr1 (39-114)||(9413987-9414062)
chr1 (39-116)||(38595860-38595939)
chr1 (80-124)||(14350271-14350315)
chr1 (1-33)||(14881049-14881081)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-117)||(53755-53872)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-123)||(22954-23077)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-120)||(6180-6300)
[»] scaffold1266 (1 HSPs)
scaffold1266 (1-117)||(292-408)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-100)||(7967-8066)
[»] scaffold0549 (1 HSPs)
scaffold0549 (1-100)||(7305-7404)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-118)||(116202-116320)
[»] scaffold0206 (1 HSPs)
scaffold0206 (1-117)||(11040-11155)
[»] scaffold1152 (1 HSPs)
scaffold1152 (2-117)||(677-793)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-116)||(14896-15012)
[»] scaffold0034 (1 HSPs)
scaffold0034 (9-123)||(95662-95777)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-118)||(68360-68478)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-118)||(146976-147093)
[»] scaffold0524 (1 HSPs)
scaffold0524 (9-116)||(825-933)
[»] scaffold0050 (2 HSPs)
scaffold0050 (2-95)||(69248-69341)
scaffold0050 (20-116)||(33770-33866)
[»] scaffold0045 (2 HSPs)
scaffold0045 (6-107)||(53421-53522)
scaffold0045 (9-116)||(50548-50656)
[»] scaffold0263 (1 HSPs)
scaffold0263 (1-117)||(19655-19771)
[»] scaffold0325 (1 HSPs)
scaffold0325 (2-120)||(17542-17658)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-77)||(40959-41035)
[»] scaffold0038 (1 HSPs)
scaffold0038 (6-116)||(25719-25829)
[»] scaffold0425 (1 HSPs)
scaffold0425 (1-56)||(10771-10826)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-52)||(233918-233969)
[»] scaffold0533 (1 HSPs)
scaffold0533 (20-62)||(5094-5136)


Alignment Details
Target: chr4 (Bit Score: 114; Significance: 7e-58; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 4268892 - 4269017
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4268892 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggggc 4268991  T
Q  100 accggttagcatttccctttttttat 125  Q
    |||||||||||||||||| |||||||    
T  4268992 accggttagcatttccctatttttat 4269017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 789600 - 789726
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  789600 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaacccgtgccccgggggc 789699  T
Q  100 accggttagcatttccctttttttatt 126  Q
    |||||||||||||||||||||||||||    
T  789700 accggttagcatttccctttttttatt 789726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 15186359 - 15186240
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  15186359 gaaactgtttttgacattattataaattaattacacaatttcaatggattaactactatataatttcctttttcatacccttaaccagtgccccgggggc 15186260  T
Q  100 accggttagcatttcccttt 119  Q
    ||||||||||||||||||||    
T  15186259 accggttagcatttcccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 43944623 - 43944505
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||    
T  43944623 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggc 43944524  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  43944523 accggttagcatttccctt 43944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16536164 - 16536046
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||    
T  16536164 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaatccgtgccccgggggc 16536065  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  16536064 accggttagcatttccctt 16536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4089258 - 4089141
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| ||| |||||    
T  4089258 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaatcagtgccccaggggc 4089159  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  4089158 accggttagcatttccct 4089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18067949 - 18068066
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  18067949 gaaactatttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggc 18068048  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  18068049 accggttagcatttccct 18068066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 43202454 - 43202571
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  43202454 aaactgtttttgacattattataaattaattacacaattttaatgcattaattactatataatttcctttttcatacccttaactagtgccccgggggca 43202553  T
Q  101 ccggttagcatttccctt 118  Q
    ||||||||||||||||||    
T  43202554 ccggttagcatttccctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7769054 - 7768934
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||     
T  7769054 gaaactgtttttaacattattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaaccagtgccccgggggt 7768955  T
Q  100 accggttagcatttccctttt 120  Q
    |||| ||||||||||||||||    
T  7768954 accgattagcatttccctttt 7768934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 47231942 - 47232064
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||| |||||||||||| | ||||||||||||| ||||||||    
T  47231942 gaaactgtttttgactttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaaccagtgctccgggggc 47232041  T
Q  100 accggttagcatttccctttttt 122  Q
    |||||||||||||||||||||||    
T  47232042 accggttagcatttccctttttt 47232064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 32217160 - 32217045
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||||||    
T  32217160 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccccgggggca 32217061  T
Q  101 ccggttagcatttccc 116  Q
    || |||||||||||||    
T  32217060 ccagttagcatttccc 32217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 19503175 - 19503289
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||| |||||| |||||||||||||| ||||||||||| |||||| |||    
T  19503175 gaaactgtttttgactttattataaattaattacacaatttcaatgtattaactagtatataatttcctttttcatatccttaaccagtacccgggagca 19503274  T
Q  101 ccggttagcatttcc 115  Q
    |||||||||||||||    
T  19503275 ccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 37988051 - 37987934
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||| || |||    
T  37988051 gaaactgtttttaacattattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaaccattaccctggagca 37987952  T
Q  101 ccggttagcatttccctt 118  Q
    ||||||| ||||||||||    
T  37987951 ccggttaacatttccctt 37987934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29591305 - 29591185
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||  ||||||||||| |||||||||    
T  29591305 gaaactgtttttgactttattataaattaagtacacaatttcaatgcattaactactatataatttccttattcatattcttaaccagtgccccgggggc 29591206  T
Q  100 accggttagcatttccctttt 120  Q
    ||| |||||||||||||||||    
T  29591205 accagttagcatttccctttt 29591185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 54897424 - 54897308
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||| |||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||| |||||||||||| |||||||||    
T  54897424 gaaattgtttttgactttattataaattaattatacaatttcaatgcattaactactatataatttcctttctcatatccttaaccagtgccccgggggc 54897325  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  54897324 accggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28755736 - 28755621
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||||| | || ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||    
T  28755736 gaaactgtttctaactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccctgggaca 28755637  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  28755636 ccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 12356360 - 12356242
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||  | | |||||    
T  12356360 gaaactgtttttgactttattataaattaattatataatttcaatgtattaactactatataatttcctttttcatatccttaaccagtatctcaggggc 12356261  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  12356260 accggttagcatttccctt 12356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32202550 - 32202666
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| |||||||| ||| ||||||| |    
T  32202550 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaacccgtgccccggggac 32202649  T
Q  100 accggttagcatttccc 116  Q
    |||||||| ||||||||    
T  32202650 accggttaacatttccc 32202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24679712 - 24679827
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||| ||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||| | | ||    
T  24679712 gaaattgtttttaactttattataaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtgccccgagaca 24679811  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  24679812 ccggttagcatttccc 24679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39844023 - 39843937
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaacca 87  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  39844023 gaaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcatttttcatatccttaacca 39843937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 42898816 - 42898933
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc-gggggc 99  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| ||  ||    
T  42898816 gaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccctggaagc 42898915  T
Q  100 accggttagcatttccct 117  Q
    |||| ||| |||||||||    
T  42898916 accgattaacatttccct 42898933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 42815225 - 42815113
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||| ||||||||||| | |  | |||    
T  42815225 gaaactgtttttgactttattataaattaattacataatttcaatacattaactatgatataatttcctttttcatatccttaaccagtactccagagca 42815126  T
Q  101 ccggttagcattt 113  Q
    |||||||||||||    
T  42815125 ccggttagcattt 42815113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 55882798 - 55882676
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||  ||||||||| ||||||| |||| ||||| | ||    
T  55882798 aaactgtttttgactttattataaattaattacacaatttcaatgcattaattactatataattt-ttttttcatatccttaacgagtgccccggagaca 55882700  T
Q  101 ccggttagcatttcccttttttta 124  Q
    ||||||||||||||||| ||||||    
T  55882699 ccggttagcatttccctattttta 55882676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 50619202 - 50619078
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||| || |||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||  ||||| ||||| |||||| ||    
T  50619202 gaaactgttttttactttattataaattaagtacacaatttcaatgcattaactactatataattttctttttcatattcttaatcagtgccccgggagc 50619103  T
Q  100 accggttagcatttcccttttttta 124  Q
    ||| ||||||||||  |||||||||    
T  50619102 accagttagcattttgcttttttta 50619078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 54054664 - 54054548
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||| |||||||||| ||||||| |||||||||||  |||||||||||||||||| |||||| |||| ||||||||| |||||||| ||| ||| |||||    
T  54054664 gaaattgtttttgactttattatcaattaattacactatttcaatgcattaactattatataatttcttttttcatatccttaaccggtgcccccggggc 54054565  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  54054564 accggttagcatttccc 54054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 54945848 - 54945940
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||||    
T  54945848 gaaattgtttttgactttattataaattaattacacaatttcaatacattaactgctatataatttcctttttcatatccttaaccagtgccc 54945940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 4220306 - 4220187
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggcaccgg 104  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||| ||  ||||  |||| |||    
T  4220306 tgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaacccgtaccccgaaggcatcgg 4220207  T
Q  105 ttagcatttcccttttttta 124  Q
    ||| |||||||| |||||||    
T  4220206 ttatcatttcccatttttta 4220187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 46688275 - 46688398
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcc-----tttttcatacccttaaccagtgcc-cg 94  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| ||| |     ||||||||| |||||||||||||| ||    
T  46688275 gaaactgcttttgactttattataaattaattacacaatttcaatgcattaactactgtataattttctttaatttttcatatccttaaccagtgcctcg 46688374  T
Q  95 ggggcaccggttagcatttccctt 118  Q
    |||||||| |||||||||||||||    
T  46688375 ggggcaccagttagcatttccctt 46688398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 54655951 - 54656038
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| ||| |||||||||||||||    
T  54655951 tgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagtgccc 54656038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33108743 - 33108860
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||| |  |||||||||||||||||| |||||| ||||||||||||||  ||||||||||| ||||| |||    
T  33108743 gaaactgtttttgactttattatcaattaattatactatttcaatgcattaactattatataatttcctttttcata-tcttaaccagtgccccggaggc 33108841  T
Q  100 accggttagcatttccctt 118  Q
    |||||||| ||||||||||    
T  33108842 accggttaacatttccctt 33108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 46149055 - 46148939
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||| ||||| || |||||| ||||||||||||||  |||| | | ||||| ||||||    
T  46149055 gaaattgtttttgactttattataaattaattacacaatttcaatgtattaattattatataatttcctttttcatattcttatcaaatgccc-ggggca 46148957  T
Q  101 ccggttagcatttccctt 118  Q
    ||||||||||||||||||    
T  46148956 ccggttagcatttccctt 46148939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 50603342 - 50603254
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg 90  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| || |||| | ||||||||| || ||||||||||||||    
T  50603342 aaactgtttttgacattattataaattaattacacaatttcaatgcattaattattatacaatttccttttccacacccttaaccagtg 50603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 3783572 - 3783687
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||| |||| |||||||||   |||||| ||| ||||| ||||    
T  3783572 aaactgtttttgactttattatcaattaattaaacaattttaatgcattaactactatataatttcatttttcatatgtttaaccggtgccccggaggca 3783671  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  3783672 ccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 36395214 - 36395139
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcata 77  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  36395214 aaactgcttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcata 36395139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 52533855 - 52533974
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||| ||| ||||||| |||||||||   ||||||| |||||||||||||||||| ||||||||||||||  ||||||||||| || || |||    
T  52533855 gaaactgttttcgactttattatcaattaattattcaatttcagtgcattaactactatataatttcctttttcatattcttaaccagtgtcctggaggc 52533954  T
Q  100 accggttagcatttcccttt 119  Q
    |||||||| |||||||||||    
T  52533955 accggttaacatttcccttt 52533974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 6164209 - 6164084
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||  | ||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||| ||| |||||||||||| |||  | ||    
T  6164209 gaaactgttttttgctttattataaattaattacacaatttcaatgcattaactactatataattttc-ttttgatatccttaaccagtgccccaagagc 6164111  T
Q  100 accggttagcatttccctttttttatt 126  Q
    |||||||| ||||||||||||| ||||    
T  6164110 accggttatcatttccctttttgtatt 6164084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31680533 - 31680650
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||| |||||||||| ||||||||||||||||| | ||||||||||||||||||| ||| ||  || ||||||||||||||||||||||| |||| | ||    
T  31680533 gaaattgtttttgactttattataaattaattatacaatttcaatgcattaactattatgtaactttctttttcatacccttaaccagtgtccggagaca 31680632  T
Q  101 ccggttagcatttccctt 118  Q
     ||||||| |||| ||||    
T  31680633 gcggttagtattttcctt 31680650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 49915275 - 49915158
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    |||||||||||| || ||||||||||||||||||| ||||||||| |||||| |||||||||  || |||||||||| |||||| |||||| || |||||    
T  49915275 gaaactgttttttactttattataaattaattacacaatttcaatacattaattactatataaatttctttttcatatccttaatcagtgcaccaggggc 49915176  T
Q  100 accggttagcatttccct 117  Q
     |||||| ||||||||||    
T  49915175 gccggtttgcatttccct 49915158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 30154233 - 30154309
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcata 77  Q
    |||| |||||||||  ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  30154233 gaaattgtttttgattttattataaattaattacataatttcaatacattaactactatataatttcctttttcata 30154309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30387204 - 30387270
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttc 67  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  30387204 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttc 30387270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 48600940 - 48600890
Alignment:
Q  116 ctttttttatttatcttttaggtcaaaagtgaagtcagcgaatgtacatca 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48600940 ctttttttatttatcttttaggtcaaaagtgaagtcagcgaatgtacatca 48600890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 50167685 - 50167583
Alignment:
Q  21 tataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttcccttt 119  Q
    ||||||||||||||| ||||||||||||||||||||  |||| ||| |||||||||| | |||||||||| |||| |  ||||||||||||||||||| |    
T  50167685 tataaattaattacacaatttcaatgcattaactac--tataattttctttttcatatctttaaccagtgccccgagaacaccggttagcatttccctat 50167588  T
Q  120 tttta 124  Q
    |||||    
T  50167587 tttta 50167583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 41265573 - 41265446
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||  || |||||||||||||||| ||||||| |||||||||||||||||| ||| | ||||  ||  |||||| |||| ||||||| ||    
T  41265573 aaactgtttttgatttt-ttataaattaattacacaatttcactgcattaactactatataattttcattttagtatgcttaactagtgtcccggggaca 41265475  T
Q  101 ccggttagcatttccctttttttatttat 129  Q
    ||| ||| ||||||||||| |||||||||    
T  41265474 ccgattaacatttccctttatttatttat 41265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5091680 - 5091798
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||| |||| ||||||||||||||||||| ||||| |||  ||||| || |||||| |||  |||||||||  ||||||||||| |||||| |     
T  5091680 gaaactgtttatgactttattataaattaattacacaattttaatatattaattattatataattttatttttcatattcttaaccagtgccccgggagt 5091779  T
Q  100 accggttagcatttccctt 118  Q
    ||||||||| |||||||||    
T  5091780 accggttagtatttccctt 5091798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 53655955 - 53656037
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg 90  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||||||| ||||||| ||||    
T  53655955 tttttaactttattataaattaattacacaatttcaatacattaactattatataatttcttttttcatatccttaacaagtg 53656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39877319 - 39877371
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaac 53  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  39877319 gaaactgtttttgactttattataaattaattacacaatttcaatacattaac 39877371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 52697160 - 52697083
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaacc 86  Q
    |||||||| ||||||||||||| ||| ||||||| |||| ||||||||||||||| |||  ||||||||| ||||||||    
T  52697160 tttttgactttattataaatta-ttatataattttaatgtattaactactatataattttgtttttcatatccttaacc 52697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 22225872 - 22225940
Alignment:
Q  58 atatagtttcctttttcat-acccttaaccagtg-cccgggggcaccggttagcatttcccttttttta 124  Q
    ||||||||||| |||| || | |||||||||||| |||||||||||||||||||||||| |||||||||    
T  22225872 atatagtttccctttttattatccttaaccagtgtcccgggggcaccggttagcatttcgcttttttta 22225940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 53268830 - 53268764
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttccttttt 73  Q
    |||||||||| || |||||||||||||||| ||||| ||||||||||||| |||||| |||| |||||    
T  53268830 tgtttttgacttt-ttataaattaattacacaattttaatgcattaactaatatataatttctttttt 53268764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 1432653 - 1432703
Alignment:
Q  42 caatgcattaactactatatagtttcctttttcatacccttaaccagtgcc 92  Q
    ||||| |||||||| |||||| |||||||||||||| ||||||||||||||    
T  1432653 caatgtattaactattatataatttcctttttcatatccttaaccagtgcc 1432703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 31517274 - 31517220
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatata 62  Q
    |||||||| ||||||| |||||||||||  |||||||||||||||||| ||||||    
T  31517274 tttttgactttattatcaattaattacactatttcaatgcattaactattatata 31517220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 39877554 - 39877612
Alignment:
Q  58 atatagtttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 116  Q
    ||||| ||| |||||||||| | |||||||||||||||||| |||||||| ||||||||    
T  39877554 atataattttctttttcatatcgttaaccagtgcccgggggtaccggttaacatttccc 39877612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 43202420 - 43202371
Alignment:
Q  80 cttaaccagtgcccgggggcaccggttagcatttccctttttttatttat 129  Q
    |||||||||||||||||||||||||||||||   ||||||||||| ||||    
T  43202420 cttaaccagtgcccgggggcaccggttagcaggaccctttttttaattat 43202371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 55594183 - 55594130
Alignment:
Q  64 tttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccct 117  Q
    ||||||||||  || ||||||||||||||| | |||||||||||||||||||||    
T  55594183 tttcctttttattatccttaaccagtgccccgaggcaccggttagcatttccct 55594130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 8133782 - 8133731
Alignment:
Q  68 ctttttcatacccttaaccagtgcccgggggcaccggttagcatttcccttt 119  Q
    |||||||||| |||||||||||| |||||   ||||||||||||||||||||    
T  8133782 ctttttcatatccttaaccagtgtccgggaagaccggttagcatttcccttt 8133731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 34151173 - 34151118
Alignment:
Q  64 tttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttcccttt 119  Q
    ||||||||||  || ||||||||||||||| |||||| |||||||||||| |||||    
T  34151173 tttcctttttattatccttaaccagtgccccggggcatcggttagcattttccttt 34151118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 16820957 - 16820912
Alignment:
Q  12 tgacattattataaattaattacataatttcaatgcattaactact 57  Q
    |||| ||||||||| ||||||||| |||||||||||||||| ||||    
T  16820957 tgactttattataagttaattacagaatttcaatgcattaattact 16820912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 17344747 - 17344800
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttccttttt 73  Q
    |||||| ||||||| ||||||| ||||||||||||| |||||| |||| |||||    
T  17344747 ttataatttaattatataatttaaatgcattaactattatataatttcattttt 17344800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34650903 - 34651018
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34650903 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcccgggggca 34651002  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  34651003 ccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 35504312 - 35504426
Alignment:
Q  3 aactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcac 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  35504312 aactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgtcccgggggcac 35504411  T
Q  102 cggttagcatttccc 116  Q
    |||||||||||||||    
T  35504412 cggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 35132637 - 35132519
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  35132637 aaactgtttttgactttattataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaaccagtgtcccgggggca 35132538  T
Q  101 ccggttagcatttcccttt 119  Q
    |||||||||||||||||||    
T  35132537 ccggttagcatttcccttt 35132519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 13661924 - 13661805
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    |||||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  13661924 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggggc 13661825  T
Q  100 accggttagcatttcccttt 119  Q
    ||||||||||||||||||||    
T  13661824 accggttagcatttcccttt 13661805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 8787455 - 8787337
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| || ||||||| |    
T  8787455 gaaactgtttttgatattattataaattaattacacaatttcaatgcattaactactatataatttcatttttcatacccttaaccaatgccccggggac 8787356  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  8787355 accggttagcatttccctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 10054430 - 10054540
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtta 107  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  10054430 ttttgacattattataaattaattacacaatttcaatgcattaattattatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 10054529  T
Q  108 gcatttccctt 118  Q
    |||||||||||    
T  10054530 gcatttccctt 10054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12506412 - 12506296
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| || | |||    
T  12506412 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatactcttaacgagtgctccagaggc 12506313  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  12506312 accggttagcatttccc 12506296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21547464 - 21547579
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| ||||||||  ||||||||| ||    
T  21547464 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccgatgcccggggaca 21547563  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  21547564 ccggttagcatttccc 21547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10070084 - 10069969
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  10070084 gaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggc 10069986  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  10069985 accggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 13470267 - 13470144
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccggg-ggc 99  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||||||||  |||||||||||||| |||||||||||||||    |||    
T  13470267 gaaactgtttttgactttattataaattaattatacaatttcaatgcattgactactatattatttcctttttcatatccttaaccagtgccccataggc 13470168  T
Q  100 accggttagcatttcccttttttt 123  Q
    ||||||||||||||||||||||||    
T  13470167 accggttagcatttcccttttttt 13470144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 31909747 - 31909629
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| ||||| |||| ||| |||||||||||  |||| ||||    
T  31909747 gaaactgtttttgactttattataaatcaattacacaatttcaatgcattaactactatataatttcccttttaatatccttaaccagtatccggaggca 31909648  T
Q  101 ccggttagcatttcccttt 119  Q
    ||||||| |||||||||||    
T  31909647 ccggttaacatttcccttt 31909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 4837369 - 4837256
Alignment:
Q  5 ctgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccgg 104  Q
    |||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||  ||||||| |||||| ||||||||||    
T  4837369 ctgtatttgactttattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatattcttaaccggtgccccggggcaccgg 4837270  T
Q  105 ttagcatttccctt 118  Q
    ||| ||||||||||    
T  4837269 ttaacatttccctt 4837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11958037 - 11958153
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||| ||| | |||||| ||| |||||||||    
T  11958037 gaaactgtttttgactttattatcaattaattacacaatttcattgcattaactactatataatttccttttttatatctttaacctgtgccccgggggc 11958136  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  11958137 accggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 9721678 - 9721793
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggca 100  Q
    |||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||  |||||||||| ||||| || ||    
T  9721678 aaactgtttttgactttattataaattaattaaacaatttcaatgcattaattactatataatttcctttttcatattcttaaccagtagcccgaggaca 9721777  T
Q  101 ccggttagcatttccc 116  Q
    ||||||| ||||||||    
T  9721778 ccggttaacatttccc 9721793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19647728 - 19647846
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||| |||| ||||||| ||||||||| | |||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| |      
T  19647728 gaaactgtttatgactttattatcaattaattatacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccggagat 19647827  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||| ||||    
T  19647828 accggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 6283673 - 6283562
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccgg 104  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| || |||||| ||| |||||||||| | ||||| |||| ||||| ||||||||    
T  6283673 tgtttttgactttattataaattaattacacaatttcaatgcattaattattatataattttctttttcatatctttaactagtgccccggaggcaccgg 6283574  T
Q  105 ttagcatttccc 116  Q
    ||||||||||||    
T  6283573 ttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 40564479 - 40564589
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggt 105  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | |||||| |  || ||  || |||||||    
T  40564479 tgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcaaatccttaatcgatgtcc-cggacaccggt 40564577  T
Q  106 tagcatttccct 117  Q
    ||||||||||||    
T  40564578 tagcatttccct 40564589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 20175338 - 20175228
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccgg 104  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||   |||||||||| | ||| | ||||||    
T  20175338 tgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttctttttttatatttttaaccagtgtctcggagacaccgg 20175239  T
Q  105 ttagcatttcc 115  Q
    |||||||||||    
T  20175238 ttagcatttcc 20175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 11846180 - 11846075
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtta 107  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||| ||| ||||| | |||| ||||||| ||||| |||    
T  11846180 ttttgactttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatccttagctagtgtcccggggacaccgctta 11846081  T
Q  108 gcattt 113  Q
    ||||||    
T  11846080 gcattt 11846075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 39069469 - 39069379
Alignment:
Q  28 taattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc-gggggcaccggttagcatttccctt 118  Q
    |||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  39069469 taattacacaattttaatgcattaactactatataatttcc-ttttcatacccttaaccagtgccctggaagcaccggttagcatttccctt 39069379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 2619643 - 2619742
Alignment:
Q  17 ttattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttcc 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||| ||| ||| |||||||||| ||||||| |||| ||||| | |||| ||||||||||||    
T  2619643 ttattataaattaattacacaatttcaatacattaactactaaataattttctttttcatatccttaacaagtgtcccggagacaccagttagcatttcc 2619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 39067010 - 39067095
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaact-actatatagtttcctttttcatacccttaaccagtg 90  Q
    |||||||||| |||||||||||||||||||||||||||||  ||||||| | |||||| |||| ||||||||| ||||||||||||    
T  39067010 tgtttttgactttattataaattaattacataatttcaatatattaactaattatataatttcttttttcatatccttaaccagtg 39067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 40057422 - 40057326
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccggggg 98  Q
    |||||| ||||||  ||||||||||||||||| |  ||||||||||| ||||||||||||| |||||||||||||| |||||| | |||||| ||||    
T  40057422 aaactgcttttgattttattataaattaattatactatttcaatgcactaactactatataatttcctttttcatatccttaatcggtgccctgggg 40057326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 19436926 - 19437033
Alignment:
Q  21 tataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttcccttt 119  Q
    ||||||||||||| | ||||||||||| ||||| |||||||| |||||||||||||| ||||||| |||| ||| | | || |||||| ||||| |||||    
T  19436926 tataaattaattatacaatttcaatgctttaaccactatataatttcctttttcatatccttaacgagtgtcccagagacatcggttaacattttccttt 19437025  T
Q  120 ttttattt 127  Q
    ||||||||    
T  19437026 ttttattt 19437033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 6284892 - 6284822
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg 90  Q
    |||||||||||||| | ||||||||| |||||| ||||||||| ||||||||||  || ||||||||||||    
T  6284892 ttataaattaattatacaatttcaatacattaattactatataatttcctttttagtatccttaaccagtg 6284822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10956067 - 10955950
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttt-tcatacccttaaccagtg-cccggggg 98  Q
    |||| |||||||||| || |||||||||||||| | ||||||||||||||||||||| |||| || |||||| |  ||  ||||||||||| ||||| ||    
T  10956067 gaaattgtttttgactttgttataaattaatta-acaatttcaatgcattaactactttataattcccttttatggtatgcttaaccagtgccccggagg 10955969  T
Q  99 caccggttagcatttccct 117  Q
    || | ||||||||||||||    
T  10955968 caacagttagcatttccct 10955950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 21944994 - 21945053
Alignment:
Q  64 tttcctttttcatacccttaaccagtgcccggg-ggcaccggttagcatttccctttttt 122  Q
    ||||||||||  || ||||||||||||||| || ||||||||||||||||||||||||||    
T  21944994 tttcctttttattatccttaaccagtgccccggaggcaccggttagcatttccctttttt 21945053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 36897379 - 36897415
Alignment:
Q  81 ttaaccagtgcccgggggcaccggttagcatttccct 117  Q
    ||||||||||||| |||||||||||||||||||||||    
T  36897379 ttaaccagtgccccggggcaccggttagcatttccct 36897415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 4268659 - 4268620
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactat 59  Q
    |||||||||||||||| ||||| |||||||||||||||||    
T  4268659 ttataaattaattacacaattttaatgcattaactactat 4268620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 16972214 - 16972174
Alignment:
Q  79 ccttaaccagtgc-ccgggggcaccggttagcatttccctt 118  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  16972214 ccttaaccagtgctccgggggcatcggttagcatttccctt 16972174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24438593 - 24438477
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  24438593 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaactagtgccccgggggc 24438494  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  24438493 accggttagcatttccc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 24798473 - 24798595
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||    
T  24798473 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctcaacaagtgcccgggggca 24798572  T
Q  101 ccggttagcatttcccttttttt 123  Q
    |||||||||||||||||| ||||    
T  24798573 ccggttagcatttcccttatttt 24798595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5239401 - 5239284
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||    
T  5239401 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgctccggaggc 5239302  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  5239301 accggttagcatttccct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 34333392 - 34333276
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtta 107  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  34333392 ttttgacattattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 34333293  T
Q  108 gcatttcccttttttta 124  Q
    ||||||||||| |||||    
T  34333292 gcatttcccttatttta 34333276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27456183 - 27456299
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||||||    
T  27456183 gaaactgcttttgactttattataaattaattacacaatttcaatgcattaactactatataatttctttttccatatccttaaccagtgcccgggggca 27456282  T
Q  101 ccggttagcatttccct 117  Q
    || ||||||||||||||    
T  27456283 ccagttagcatttccct 27456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 29993565 - 29993679
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtta 107  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||||| ||||    
T  29993565 ttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgccccgggggcacccgtta 29993664  T
Q  108 gcatttccctttttt 122  Q
    |||||||||||||||    
T  29993665 gcatttccctttttt 29993679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 28588020 - 28587911
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggt 105  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  28588020 tgtttttgactttattataaattaattacacaatttcaatacattgactactatataatttcctttttcatatccttaaccagtgtccgggggcaccggt 28587921  T
Q  106 tagcatttcc 115  Q
    ||||||||||    
T  28587920 tagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 8754656 - 8754771
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggca 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||  |||||    
T  8754656 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcatttttcatatccttaaccagtgctcccagggca 8754755  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  8754756 ccggttagcatttccc 8754771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 34546385 - 34546504
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc-cgggggca 100  Q
    |||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| || || ||||||||    
T  34546385 aaactgtttttgactttactataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtacctcgggggca 34546484  T
Q  101 ccggttagcatttccctttt 120  Q
     |||||||||||||||||||    
T  34546485 tcggttagcatttccctttt 34546504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47839608 - 47839492
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||  ||||||||||||| ||||||||||| ||| ||| ||    
T  47839608 gaaactgtttttgactttattataaattaattacacaatttcaatgtattaactattatataaattcctttttcatatccttaaccagtaccccgggaca 47839509  T
Q  101 ccggttagcatttccct 117  Q
    |||||||||||||||||    
T  47839508 ccggttagcatttccct 47839492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 30810770 - 30810679
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  30810770 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 30810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 12218522 - 12218624
Alignment:
Q  17 ttattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttcc 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  12218522 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttcc 12218621  T
Q  116 ctt 118  Q
    |||    
T  12218622 ctt 12218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18486077 - 18485959
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||| || ||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||  ||| |||||||||||| |||||||||    
T  18486077 gaaactgtttttaactttattataaattaattacacaatttcaatacattaattactatataatttccttttcaatatccttaaccagtgccccgggggc 18485978  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  18485977 accggttagcatttccctt 18485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 34606377 - 34606261
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||| ||||||| |||||||||||||||| || |||||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||||| |||    
T  34606377 gaaactgcttttgactttattataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggaggc 34606278  T
Q  100 accggttagcatttccc 116  Q
    ||| |||||||||||||    
T  34606277 accagttagcatttccc 34606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 43594106 - 43594222
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||||||||||||| |||||| |||||||||| ||| ||||||||||||  |||||| |    
T  43594106 gaaactgtttttgactttattataaattaattatacaatttcaatgcattaactattatataatttccttttttatatccttaaccagtgttccggggac 43594205  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  43594206 accggttagcatttccc 43594222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 4628681 - 4628562
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    ||||||||| |||| ||||||||||||||||| | |||||||||| ||||||||||||||| |||||||||||||| |||||||| ||| ||| ||||||    
T  4628681 aaactgtttctgactttattataaattaattaaacaatttcaatgtattaactactatataatttcctttttcatatccttaaccggtgccccaggggca 4628582  T
Q  101 ccggttagcatttccctttt 120  Q
     |||||||||||||||||||    
T  4628581 tcggttagcatttccctttt 4628562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45045886 - 45045799
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccag 88  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  45045886 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaattactatataatttcatttttcatacccttaaccag 45045799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 11686395 - 11686507
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggca 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| |||||||||||  |||||  |||    
T  11686395 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtatcccggaagca 11686494  T
Q  101 ccggttagcattt 113  Q
    || ||||||||||    
T  11686495 ccagttagcattt 11686507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 42044364 - 42044459
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggg 97  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| |||| ||||||||||| |||||| ||||||||||    
T  42044364 aaactgtttttgacattattataaattaattacacaatttcaatctattaactactatataatttcttttttcatacctttaaccggtgcccgggg 42044459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 23363237 - 23363358
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| || ||||||| ||||| | ||| ||    
T  23363237 gaaactgtttttaactttattataaattaattacacaatttcaatgcattaactactatacaatttcctttttcttatccttaacgagtgctccgggaca 23363336  T
Q  101 ccggttagcatttccctttttt 122  Q
    ||||||| ||||| ||| ||||    
T  23363337 ccggttaacattttcctatttt 23363358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 5729455 - 5729344
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccggtt 106  Q
    |||||||| ||||||| |||||||||||| |||||||| ||||||||| |||||| |||||||||||||| ||||||||||||| |||||  ||||||||    
T  5729455 tttttgactttattatcaattaattacattatttcaatacattaactattatataatttcctttttcatatccttaaccagtgctccgggaacaccggtt 5729356  T
Q  107 agcatttccctt 118  Q
    | ||||||||||    
T  5729355 aacatttccctt 5729344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 47657095 - 47656981
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||| |||| || ||||||||||||||||||| |||||||||||||||| ||||||||| ||| |||||||||| |||||||||||| ||| |  |||    
T  47657095 aaactgcttttaactttattataaattaattacacaatttcaatgcattaattactatataattttctttttcatatccttaaccagtgcccccgaagca 47656996  T
Q  101 ccggttagcatttcc 115  Q
    |||||||||||||||    
T  47656995 ccggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37631612 - 37631729
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||| || |||||| |||||||||| ||| |||||||| ||| |||||  ||    
T  37631612 gaaactgtttttgattttattataaattaattacataattttaatgcattaattattatataatttccttttttatatccttaacccgtgccccggaagc 37631711  T
Q  100 accggttagcatttccct 117  Q
    |||||||| |||||||||    
T  37631712 accggttaacatttccct 37631729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 18117258 - 18117142
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |||||||  |||||| | || || || |||     
T  18117258 aaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctctttcatatacttaacaaatgtcccggagcat 18117159  T
Q  102 cggttagcatttccctt 118  Q
    |||||||||||| ||||    
T  18117158 cggttagcattttcctt 18117142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 28262142 - 28262024
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||     ||||||||||||| |||||||||||||| |||||||| ||| ||||| |||    
T  28262142 gaaactgtttttgattttattatcaattaattacataatttcaa-----taactactatataatttcctttttcatatccttaaccggtgacccggaggc 28262048  T
Q  100 accggttagcatttcccttttttt 123  Q
    |||||||||||||| ||| |||||    
T  28262047 accggttagcattttcctattttt 28262024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 7689271 - 7689389
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| || | |||||||||| ||| |||||| ||||| ||| | | ||    
T  7689271 aaactgtttttgactttattataaattaattacacaatttcaatgcattaattactgtaaaatttccttttttatatccttaatcagtgtcccagagaca 7689370  T
Q  101 ccggttagcatttcccttt 119  Q
    ||||||| |||||||||||    
T  7689371 ccggttaacatttcccttt 7689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1737096 - 1736980
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||| ||||||| || ||||||| |||||||||||  |||||||||||||||||| |||||| |||| ||||||||| |||||||||||| ||| |  ||    
T  1737096 gaaaatgtttttaactttattatcaattaattacactatttcaatgcattaactattatataatttcatttttcatatccttaaccagtgccccagaagc 1736997  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  1736996 accggttagcatttccc 1736980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 13064954 - 13065061
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggtta 107  Q
    |||||||| ||||||||||||||||||| || |||||| |||||| || |||||| |||||||||||||| ||||||||| |  ||| ||||||||||||    
T  13064954 tttttgactttattataaattaattacacaaattcaatacattaaatattatataatttcctttttcatatccttaaccaat-accgtgggcaccggtta 13065052  T
Q  108 gcatttccc 116  Q
    |||||||||    
T  13065053 gcatttccc 13065061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 18470012 - 18470138
Alignment:
Q  3 aactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg--cccgggggca 100  Q
    ||||||||||||| || | |||||||||||||| |||||||||| ||||||| ||||||| ||||||||||  ||  ||||||| |||  ||||||||||    
T  18470012 aactgtttttgacttt-tcataaattaattacacaatttcaatgtattaactgctatataatttcctttttagtatgcttaaccggtgcccccgggggca 18470110  T
Q  101 ccggttagcatttccctttttttattta 128  Q
    |||||||||||||||| | |||||||||    
T  18470111 ccggttagcatttcccatattttattta 18470138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 37674175 - 37674306
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttc---------ctttttcatacccttaaccagtgc- 91  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||         |||||| ||| |||||| |||| |     
T  37674175 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcattaattttcttttttatatccttaatcagtact 37674274  T
Q  92 ccgggggcaccggttagcatttcccttttttt 123  Q
    || |||||| ||||||||||||||||||||||    
T  37674275 ccaggggcatcggttagcatttcccttttttt 37674306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 525145 - 525234
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg 90  Q
    ||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||| |||| ||| |||||||||| | ||||||||||    
T  525145 gaaactgtttttgattttattataaattaattatacaatttcaatgcattaactactgtatacttttctttttcatatctttaaccagtg 525234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 46716747 - 46716642
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccggtt 106  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| || |||||| |||||||||| ||| | ||||||| ||| ||| ||||||| |||    
T  46716747 tttttgactttattataaattaattacataatttcagtgcattaagtattatataatttccttttttatatctttaaccaatgctccgagggcaccagtt 46716648  T
Q  107 agcatt 112  Q
    ||||||    
T  46716647 agcatt 46716642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 47083171 - 47083086
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaacc 86  Q
    |||||||||||| || ||||||| ||||||||||| ||||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  47083171 gaaactgtttttaactttattatcaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaacc 47083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 4100595 - 4100684
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc 91  Q
    |||||||||||||  | ||||||||||||| ||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| ||||    
T  4100595 aaactgtttttgatttgattataaattaataacataattttaatacattaattactatataatttcctttttcatatccttaaccggtgc 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 22739920 - 22739868
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttcctttt 72  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  22739920 ttataaattaattacacaatttcaatgcattaactactatatactttcctttt 22739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4087738 - 4087650
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg 90  Q
    |||||||||||||| | | |||||||||||| |||  ||||||||||||||||||||||||| ||||||||||  ||  |||||||||||    
T  4087738 gaaactgtttttgaaact-ttataaattaatcacactatttcaatgcattaactactatataatttcctttttagtatgcttaaccagtg 4087650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 33636567 - 33636479
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg 90  Q
    ||||| ||||| || ||||||||||||||||||| |||||||||| ||||| || |||||| ||| ||||||||||  |||||| ||||    
T  33636567 aaactattttttactttattataaattaattacacaatttcaatgaattaattattatataattttctttttcatattcttaactagtg 33636479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 29835775 - 29835860
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaacca 87  Q
    ||||||||||| || |||||| |||||||||||  ||||| ||| ||||||||| ||||||  ||||||||||||| | |||||||    
T  29835775 aaactgtttttaactttattacaaattaattacgcaattttaatacattaactagtatataacttcctttttcatatctttaacca 29835860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 3021988 - 3021912
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccggg 96  Q
    |||||||||||||| | |||||||||| |||||||| |||||| |||||||||| |||  ||||||| || ||||||    
T  3021988 ttataaattaattatacaatttcaatgtattaactagtatataatttcctttttaatatgcttaacccgtacccggg 3021912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 6097429 - 6097325
Alignment:
Q  26 attaattacataattt-caatgcattaactactatatagtttcctttttcat-acccttaaccagtgccc-gggggcaccggttagcatttccctttttt 122  Q
    |||||||| ||||||| ||||||| ||| ||  ||||| ||||| |||| || | ||||||||||||||| ||||||| ||||||||||||||||| |||    
T  6097429 attaattaaataattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgccccgggggcatcggttagcatttcccttattt 6097330  T
Q  123 tattt 127  Q
    |||||    
T  6097329 tattt 6097325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18220602 - 18220697
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggg 97  Q
    |||||||||||||| | | ||| |||||||||||| ||||||||| || ||| ||||||||| ||||||||||  ||  ||||||||| ||||||||    
T  18220602 gaaactgtttttgataat-ttacaaattaattacacaatttcaatacagtaattactatataatttcctttttagtattcttaaccagcgcccgggg 18220697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 18220742 - 18220812
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttccttttt 73  Q
    ||||| |||||| |||| |||||||||||||||| |||||| || |||||| ||||||||| ||||||||||    
T  18220742 aaactatttttgccatt-ttataaattaattacacaatttctatacattaattactatataatttccttttt 18220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 36437491 - 36437405
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt 89  Q
    ||||| |||||||| || |||||||||||||| | |||||||||| |||| |||||||||| || |||||||  || |||||||||||    
T  36437491 aaactatttttgacttt-ttataaattaattaaacaatttcaatgaattacctactatataattacctttttagtatccttaaccagt 36437405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 18220509 - 18220593
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaacc 86  Q
    |||| ||||||||||| | |||||||||||||||| ||||| ||| |||||| ||||||||| ||| ||||||  || ||||||||    
T  18220509 gaaattgtttttgacaat-ttataaattaattacacaattttaatacattaattactatataattttctttttagtatccttaacc 18220593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 116
Target Start/End: Original strand, 13106466 - 13106501
Alignment:
Q  81 ttaaccagtgcccgggggcaccggttagcatttccc 116  Q
    |||||||||||||| |||||||||||||||||||||    
T  13106466 ttaaccagtgcccgagggcaccggttagcatttccc 13106501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 47118097 - 47118150
Alignment:
Q  64 tttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttccc 116  Q
    |||||||||||||| | |||||||||| ||||| |||||| |||||||||||||    
T  47118097 tttcctttttcatatctttaaccagtgccccggaggcaccagttagcatttccc 47118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 22973667 - 22973595
Alignment:
Q  48 attaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttcccttt 119  Q
    ||||||||||||||| |||| ||||| ||| | |||||||||| ||||| |||||  ||||||||||| ||||    
T  22973667 attaactactatataatttctttttttatatcattaaccagtgccccggaggcactagttagcatttctcttt 22973595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 34556998 - 34557078
Alignment:
Q  39 tttcaatgcattaactactatatagtttcctttttcat-acccttaaccagtgcccgggggcaccggttagcatttccctt 118  Q
    |||||||||| ||| ||  ||||| ||||| |||| || | ||||||||| ||||| |||||||| |||||||||||||||    
T  34556998 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccggggcaccagttagcatttccctt 34557078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 7e-52; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3515882 - 3515763
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc-gggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  3515882 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccctgggggc 3515783  T
Q  100 accggttagcatttcccttt 119  Q
    ||||||||||||||||||||    
T  3515782 accggttagcatttcccttt 3515763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 392212 - 392096
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  392212 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggc 392113  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  392112 accggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4215811 - 4215693
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||    
T  4215811 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccccgggggc 4215712  T
Q  100 accggttagcatttccctt 118  Q
    |||||||| ||||||||||    
T  4215711 accggttaacatttccctt 4215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27433608 - 27433491
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  27433608 gaaactatttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggc 27433509  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  27433508 accggttagcatttccct 27433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21878417 - 21878533
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccggg-ggc 99  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||    
T  21878417 gaaactgtttttgactttattataaattaattaaataatttcaatgcattaactactatataatttcctttttcatatccttaacccgtgcccgggaggc 21878516  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  21878517 accggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18276685 - 18276804
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  18276685 gaaactgtttttgactttattataaattaattacacaaattcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccaggggca 18276784  T
Q  101 ccggttagcatttccctttt 120  Q
    || |||| ||||||||||||    
T  18276785 ccagttaacatttccctttt 18276804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32929578 - 32929697
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| || |||||| |||||||||||||||||||||||| || |||||||||    
T  32929578 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaattaatatataatttcctttttcatacccttaaccattgccccgggggc 32929677  T
Q  100 accggttagcatttcccttt 119  Q
    ||||||||||||||||||||    
T  32929678 accggttagcatttcccttt 32929697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20898064 - 20897946
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc-gggggc 99  Q
    |||||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  20898064 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccctgggggc 20897965  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  20897964 accggttagcatttccctt 20897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 34396597 - 34396715
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||| || ||||||    
T  34396597 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgtcctgggggc 34396696  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  34396697 accggttagcatttccctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 3026080 - 3026196
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||||    
T  3026080 aaactgtttttgacattattataaattaattatacaatttcaatgcattaactactgtataatttcatttttcatacccttaaccagtgccc-ggggcac 3026178  T
Q  102 cggttagcatttcccttt 119  Q
    | ||||||||||||||||    
T  3026179 cagttagcatttcccttt 3026196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12145187 - 12145303
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| | ||||||    
T  12145187 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtgcactgggggc 12145286  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  12145287 accggttagcatttccc 12145303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12525835 - 12525716
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggc 99  Q
    |||||||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||| |||    
T  12525835 gaaactgtgtttgacattattataaattaattacacattttcaatgtattaactactatataatttcctttttcatacccttaaccagtaccccggaggc 12525736  T
Q  100 accggttagcatttcccttt 119  Q
    ||||||||||||||||||||    
T  12525735 accggttagcatttcccttt 12525716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7851229 - 7851347
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc-gggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||| ||| |||||||||| ||||||||||||||| ||||||    
T  7851229 gaaactgtttttgactttattataaattaattacacaattttaatgcattaattactatataattttctttttcatatccttaaccagtgccctgggggc 7851328  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  7851329 accggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 1391249 - 1391370
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| |||||| |||| ||| || ||||    
T  1391249 aaactgtttttgactttattataaattaattatacaatttcaatgcattaactactatataatttcctttttcatatccttaatcagtaccccggagcac 1391348  T
Q  102 cggttagcatttcccttttttt 123  Q
    ||||||||||||||||| ||||    
T  1391349 cggttagcatttcccttctttt 1391370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23402254 - 23402130
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||||| |||    
T  23402254 gaaactgtttttgactttattataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggaggc 23402155  T
Q  100 accggttagcatttcccttttttta 124  Q
    ||| ||||||||||||||| |||||    
T  23402154 accagttagcatttcccttatttta 23402130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29451185 - 29451301
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||| |||||| ||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  29451185 gaaactgtgtttgactttattataatttaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgcccggaggca 29451284  T
Q  101 ccggttagcatttccct 117  Q
    || ||||||||||||||    
T  29451285 ccagttagcatttccct 29451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2350768 - 2350654
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||| ||    
T  2350768 gaaactatttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgccccgggagc 2350669  T
Q  100 accggttagcatttc 114  Q
    |||||||||||||||    
T  2350668 accggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31280437 - 31280320
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc-cgggggc 99  Q
    ||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| | ||||| ||||||| |||| ||    
T  31280437 gaaaccgtttttgacattattataaattaattatacaatttcaatgcattaactactatataatttcctttttcattctcttaatcagtgcctcgggagc 31280338  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  31280337 accggttagcatttccct 31280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34477620 - 34477719
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  34477620 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccgggggca 34477719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 29978347 - 29978233
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| |||||||||||  |||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||| |||| |||| |||||    
T  29978347 aaactgtttttgactttattataaatatattacataatttcaatacattaaatactatataatttcctttttcatatccttaactagtgtccggaggcac 29978248  T
Q  102 cggttagcatttccc 116  Q
    |||||||||||||||    
T  29978247 cggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 2581061 - 2580952
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc-cgggggcaccggtt 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||||||||| || |  |||||||||||    
T  2581061 tttttgactttattataaattaattacataatttcaatgcattaactactatataatttccttttttatatcattaaccagtacctcaagggcaccggtt 2580962  T
Q  107 agcatttccc 116  Q
    ||||||||||    
T  2580961 agcatttccc 2580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32985263 - 32985376
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| ||| ||||||||| || |||| ||||    
T  32985263 gaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccaatgccccgagggc 32985362  T
Q  100 accggttagcattt 113  Q
    ||||||| ||||||    
T  32985363 accggtttgcattt 32985376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26467194 - 26467286
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  26467194 gaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgccc 26467286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23629646 - 23629761
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||| |||||||||| |||||||||| |||||||| ||||||||| |||||||||||||||| ||| |||||||||| |||||| |||||||| ||||||    
T  23629646 gaaattgtttttgactttattataaagtaattacacaatttcaatacattaactactatataattttctttttcatatccttaatcagtgccccggggca 23629745  T
Q  101 ccggttagcatttccc 116  Q
     |||||| ||||||||    
T  23629746 tcggttaacatttccc 23629761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 35044004 - 35043877
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||| |||| ||||||||| |||||||||||| |||| || ||    
T  35044004 aaactgtttttgactttattataaattaat-acacaatttcaatgaattaactactatataatttcttttttcatatccttaaccagtgtcccgtggaca 35043906  T
Q  101 ccggttagcatttccctttttttatttat 129  Q
    || ||||||||||||| | |||| |||||    
T  35043905 ccagttagcatttcccatattttttttat 35043877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 25165484 - 25165605
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||| |||| ||||||||| ||||||||| || || |||| ||    
T  25165484 aaactgtttttgactttattataaattaattacacaatttcaatatattaactactatataatttcttttttcatatccttaacca-tgtcctggggaac 25165582  T
Q  102 cggttagcatttcccttttttta 124  Q
    || |||||||||| ||| |||||    
T  25165583 cgattagcatttctcttatttta 25165605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 13529554 - 13529454
Alignment:
Q  18 tattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttccc 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||  |||||  |||||||||||||    
T  13529554 tattataaattaattacacaatttcaatgcattaactactatataatttcctttttcacatccttaaccagtgccccgaaggcacaagttagcatttccc 13529455  T
Q  117 t 117  Q
    |    
T  13529454 t 13529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 34851926 - 34852030
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtt 106  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| | |||| ||||| ||| || |||||||||    
T  34851926 tttttgactttattataaatcaattacacaatttcaatgcattaactactatataatttcctttttcatatctttaa-cagtgtcccaggagcaccggtt 34852024  T
Q  107 agcatt 112  Q
    ||||||    
T  34852025 agcatt 34852030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 13417030 - 13417124
Alignment:
Q  2 aaactgtttttgac---attattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    ||||||||||||||   |||||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||| ||||||| |||||||    
T  13417030 aaactgtttttgactttattattataaattaattacacaatttcaatacattaactaatatataatttcctttttcatatccttaactagtgccc 13417124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1840317 - 1840417
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||||||| || ||||||||||||||||||| ||||| ||| |||||| || |||||| |||| ||||| ||| ||||||||||||| ||||||||    
T  1840317 gaaactgtttttaactttattataaattaattacacaattttaatacattaattattatataatttctttttttatatccttaaccagtgctcgggggca 1840416  T
Q  101 c 101  Q
    |    
T  1840417 c 1840417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 5323516 - 5323392
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||| |||  ||||| |||||| |   ||||    
T  5323516 gaaattgtttttgactttattataaattaattacataattttaatgctttaattactatataatttccttttttatattcttaatcagtgctcatagggc 5323417  T
Q  100 accggttagcatttcccttttttta 124  Q
    || | ||||||||||||||| ||||    
T  5323416 actgattagcatttccctttattta 5323392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 11115180 - 11115256
Alignment:
Q  16 attattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc 92  Q
    |||||||||||||||||||| |||||||||| |||||||| |||||| |||||||||| ||| ||||||||||||||    
T  11115180 attattataaattaattacacaatttcaatgtattaactattatataatttccttttttatatccttaaccagtgcc 11115256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 28225331 - 28225221
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggcaccgg 104  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||| |||||||||  ||||||||||||| |||||||| ||  ||| | |||||| |    
T  28225331 tgtttttgactttattataaattaattacacaatttcaatacattaattactatata-attcctttttcatatccttaacccgtatcccagaggcaccag 28225233  T
Q  105 ttagcatttccc 116  Q
    ||||||||||||    
T  28225232 ttagcatttccc 28225221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9661102 - 9660988
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc-cgggggc 99  Q
    ||||||| |||| || ||||| ||||||||||| | ||||||||||||||||||| ||| || |||| ||||||||| |||||||  ||||| || ||||    
T  9661102 gaaactgcttttaactttattttaaattaattatacaatttcaatgcattaactattatgtaatttcttttttcatatccttaactggtgccacgagggc 9661003  T
Q  100 accggttagcatttc 114  Q
    |||||||||||||||    
T  9661002 accggttagcatttc 9660988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 961125 - 961051
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttca 75  Q
    |||| ||||| |||| ||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  961125 gaaattgtttctgactttattatcaattaattacacaattttaatgcattaactactatataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 28562774 - 28562682
Alignment:
Q  23 taaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttcc 115  Q
    ||||||||||||| ||||| ||| | |||| ||||||||||||||  |||| ||| | |||||| ||| || ||||||||| |||||||||||    
T  28562774 taaattaattacagaattttaatacgttaattactatatagtttctattttaatatcattaaccggtgtcccggggcaccgattagcatttcc 28562682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 14559993 - 14559920
Alignment:
Q  46 gcattaactactatatagtttcctttttcatacccttaaccagtgcccggg-ggcaccggttagcatttccctt 118  Q
    |||||||||| |||||| |||| ||||||||| | |||| |||| ||| |  ||||||||||||||||||||||    
T  14559993 gcattaactattatatattttcttttttcatatctttaatcagttccccgaaggcaccggttagcatttccctt 14559920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 7e-52; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 52520797 - 52520678
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  52520797 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggc 52520698  T
Q  100 accggttagcatttcccttt 119  Q
    ||||||||||||||||||||    
T  52520697 accggttagcatttcccttt 52520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 39074527 - 39074419
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtta 107  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  39074527 ttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggtta 39074428  T
Q  108 gcatttccc 116  Q
    |||||||||    
T  39074427 gcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 46352750 - 46352624
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||||| |||||||||    
T  46352750 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggggc 46352651  T
Q  100 accggttagcatttccctttttttatt 126  Q
    |||||||||||||||||||||||||||    
T  46352650 accggttagcatttccctttttttatt 46352624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 272336 - 272219
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  272336 gaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggc 272237  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  272236 accggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43786987 - 43786871
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||    
T  43786987 gaaactgtttttgatattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccggaggc 43786888  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  43786887 accggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 53489894 - 53490012
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc---gggg 97  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||    
T  53489894 gaaactgtttttgacattattataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggg 53489993  T
Q  98 gcaccggttagcatttccc 116  Q
    |||||| ||||||||||||    
T  53489994 gcaccgattagcatttccc 53490012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 41554010 - 41554135
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| | ||||||    
T  41554010 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcaccggggca 41554109  T
Q  101 ccggttagcatttccctttttttatt 126  Q
    || |||||||||| ||| | ||||||    
T  41554110 ccagttagcattttcctatatttatt 41554135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 49893447 - 49893330
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  49893447 gaaactgtttttgactttattatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccgggggc 49893348  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  49893347 accggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20924108 - 20923992
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||  ||    
T  20924108 gaaactgtttttgatattattataaattaattacacaatttcaatgaattaactactatataatttcctttttcatacccttaaccagtgccccggaagc 20924009  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  20924008 accggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 48725387 - 48725271
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||| |||||    
T  48725387 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggc 48725288  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  48725287 accggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 858705 - 858587
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| | ||||||    
T  858705 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtgcactgggggc 858606  T
Q  100 accggttagcatttccctt 118  Q
    ||||||| |||||||||||    
T  858605 accggtttgcatttccctt 858587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 4168298 - 4168183
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccag-tgcccgggggca 100  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| ||| |||||||||| | ||||| ||||    
T  4168298 aaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagttccccggaggca 4168199  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  4168198 ccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10617354 - 10617469
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||| |||||| ||||| |||||||||    
T  10617354 gaaattgtttttgactttattataaattaattacacaattttaatgcattaactactatataatttccttttttatatccttaatcagtgtccgggggca 10617453  T
Q  101 ccggttagcatttccc 116  Q
    ||||||| ||||||||    
T  10617454 ccggttaacatttccc 10617469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18014788 - 18014668
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||| || ||||||||  ||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||| ||||| |||||||||    
T  18014788 gaaactgtttttaactttattatagtttaattacacaatttcaatgcattaactactatataatttactttttcatatccttaatcagtgccccgggggc 18014689  T
Q  100 accggttagcatttccctttt 120  Q
    ||| |||||||||||||||||    
T  18014688 accagttagcatttccctttt 18014668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 41304119 - 41304004
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| |||||||||||  ||||||||||||||| ||||||||| |||||||||||||| ||||||||| || ||||| |||    
T  41304119 gaaactgtttttgactttattatcaattaattaca--atttcaatgcattaattactatataatttcctttttcatatccttaaccactgccccggaggc 41304022  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  41304021 accggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 40362651 - 40362768
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||| |||| ||||||||| |||||| ||||| ||||| ||||    
T  40362651 aaactgtttttgactttattatcaattaattacacaattttaatgcattaactactatataatttcttttttcatatccttaatcagtgccccggaggca 40362750  T
Q  101 ccggttagcatttccctt 118  Q
    | ||||||||||||||||    
T  40362751 cgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2119547 - 2119431
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc-cgggggc 99  Q
    |||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||| | |||||||||||| || || |    
T  2119547 gaaattgtttttgactttattataaattaattactcaatttcaatgcattaactactatataatttcctttttcatatctttaaccagtgcctcgaggac 2119448  T
Q  100 accggttagcatttccc 116  Q
    |||||||| ||||||||    
T  2119447 accggttaacatttccc 2119431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 42964320 - 42964411
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||| ||||||||| |||||||||||||||    
T  42964320 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgccc 42964411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 52246693 - 52246582
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccgg 104  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||| |||||||| |||| ||||||||| |||||||||||| ||||| |||||| |    
T  52246693 tgtttttgactttattataaattaattatacaatttcaatgcattaacaactatataatttcatttttcatatccttaaccagtgccccggaggcaccag 52246594  T
Q  105 ttagcatttccc 116  Q
    ||||||||||||    
T  52246593 ttagcatttccc 52246582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43269809 - 43269923
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||| |||  |||    
T  43269809 gaaactgtgtttgattttattataaattaattacataatttcaatgcattaactactatgtaatttcccttttcatatccttaaccagtgctccgaaggc 43269908  T
Q  100 accggttagcatttc 114  Q
    |||||||| ||||||    
T  43269909 accggttaacatttc 43269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 13160012 - 13159895
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccag-tgcccgggggca 100  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||| ||   ||| || |||    
T  13160012 aaactgtttttgactttattatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaactagaaccccaggagca 13159913  T
Q  101 ccggttagcatttccctt 118  Q
    ||||||||||||||||||    
T  13159912 ccggttagcatttccctt 13159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 49529336 - 49529451
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactac---tatatagtttcctttttcatacccttaaccagtgcccgggg 97  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||| ||| |||||||||| |||||| |||||||| |||    
T  49529336 gaaaatgtttttgactttattataaattaattacataatttcaatgcattaactactagtatataattttctttttcatatccttaatcagtgccccggg 49529435  T
Q  98 gcaccggttagcattt 113  Q
    |||||| ||| |||||    
T  49529436 gcaccgattatcattt 49529451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 7468526 - 7468417
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||  |||||||||||| ||||||||      
T  7468526 aaactgcttttgactttattataaattaattatacaatttcaatgcattaactactatataatttcctttttcatttccttaaccagtgtcccggggg-- 7468429  T
Q  101 ccggttagcatt 112  Q
    ||||||||||||    
T  7468428 ccggttagcatt 7468417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 29241749 - 29241669
Alignment:
Q  5 ctgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaac 85  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  29241749 ctgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttccattttcatatccttaac 29241669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 42548204 - 42548096
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggtta 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||| |||||||  | |||| ||| ||    
T  42548204 tttttgactttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatctttaagcagtgcctcgaggcatcggcta 42548105  T
Q  108 gcatttccc 116  Q
    |||||||||    
T  42548104 gcatttccc 42548096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2505465 - 2505350
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||| |||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| | ||||||| || || || |||    
T  2505465 gaaactatttttgactttattatgaattaattacacaatttcaatgcactaactactatataatttcctttttcatatctttaaccaatgtccaggagca 2505366  T
Q  101 ccggttagcatttccc 116  Q
     |||||||||||||||    
T  2505365 gcggttagcatttccc 2505350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 50359257 - 50359368
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| |||||||| |||||||||  |||||||||||||||||||||||||| |||  |||||| || ||||||||||||||  |||||||    
T  50359257 aaactgtttttgactttattatatattaattacccaatttcaatgcattaactactatataattttttttttcttaaccttaaccagtgccacggggcac 50359356  T
Q  102 cggttagcattt 113  Q
    | ||||||||||    
T  50359357 cagttagcattt 50359368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 28139417 - 28139299
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtta 107  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||||| || |||| ||||||||| |||||||||||| |  ||||||||| ||||    
T  28139417 ttttgactttattataaattaattatacaatttcaatgcattaactactatttaatttcttttttcatatccttaaccagtgtcttgggggcaccagtta 28139318  T
Q  108 gcatttccctttttttatt 126  Q
    ||||||||| | |||||||    
T  28139317 gcatttcccatattttatt 28139299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 22249001 - 22248908
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgg 95  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| || ||||||||||||| |||||||||||||| ||||||| |||||||||    
T  22249001 aaactgtttttgactttattatcaattaattacacaatttcaatacaataactactatataatttcctttttcatatccttaactagtgcccgg 22248908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11308280 - 11308398
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||| |||||||  ||||||| |||||||||||| |||||||||||||||||| |||||| |||||||||||| | |||||| ||||| |||||   |    
T  11308280 gaaactatttttgattttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaatcagtgtcccggaaac 11308379  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  11308380 accggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 50395640 - 50395742
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtta 107  Q
    ||||||| ||||||| ||||||||||| |||||| |||||||||||||| |||| ||| |||||||||| || ||||||||| |||||||||||||||||    
T  50395640 ttttgactttattatcaattaattacacaatttctatgcattaactactgtataattttctttttcatatccctaaccagtgtcccgggggcaccggtta 50395739  T
Q  108 gca 110  Q
    |||    
T  50395740 gca 50395742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41993689 - 41993761
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttccttttt 73  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  41993689 gaaactgtttttaactttattataaattaattacataatttcaatgcattaactactatataatttcattttt 41993761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2938110 - 2938217
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||| |||||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||| ||| |||||| ||| | ||||||||| ||| ||||||    
T  2938110 gaaattgtttttgactttattataaattaatcacacaatttcagtgcattaactactatataattttcttttttatatctttaaccagtacccaggggca 2938209  T
Q  101 ccggttag 108  Q
    || |||||    
T  2938210 ccagttag 2938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 38852332 - 38852216
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcatta---actactatatagtttcctttttcatacccttaaccagtgcccggggg 98  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||   ||||||||||| |||| ||||| ||| ||||||| | || || ||||    
T  38852332 aaactgtttttgactttattataaattaattacacaatttcaatgcattaattactactatataatttcattttttatatccttaacgaatgtcccgggg 38852233  T
Q  99 caccggttagcatttccc 116  Q
     |||||||||||||||||    
T  38852232 -accggttagcatttccc 38852216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 52718252 - 52718166
Alignment:
Q  32 tacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccctt 118  Q
    |||| ||||| |||| ||||||||||||||| |||||||||||||| |||||||||||| ||||| |||||| |||| |||||||||    
T  52718252 tacacaattttaatgtattaactactatataatttcctttttcatatccttaaccagtgtccgggagcaccgattagtatttccctt 52718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50299015 - 50299076
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatata 62  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  50299015 gaaactgtttttgactttattataaattaattacacaatttcagtgcattaactactatata 50299076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6842735 - 6842676
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactata 60  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  6842735 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattata 6842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 2391687 - 2391631
Alignment:
Q  37 aatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  2391687 aatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgccc 2391631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 2393448 - 2393392
Alignment:
Q  37 aatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  2393448 aatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgccc 2393392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24488482 - 24488390
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    ||||||||||||||  ||||||| |||||||||||  ||||| |||||||||||| |||||| |||||||||| | |  ||||||||||||||    
T  24488482 gaaactgtttttgattttattatcaattaattacactatttccatgcattaactattatataatttccttttttacattcttaaccagtgccc 24488390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 33141000 - 33140940
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatata 62  Q
    |||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  33141000 aaactgcttttgactttattataaattaattatacaatttcaatgcattaactactatata 33140940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 31514902 - 31514831
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcata 77  Q
    |||||||||  ||||||||||||||||||| ||||| ||| |||||||||||||||| |||  |||||||||    
T  31514902 tgtttttgattttattataaattaattacacaattttaatacattaactactatataattttatttttcata 31514831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 2362861 - 2362801
Alignment:
Q  57 tatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccggttagcatttccc 116  Q
    |||||| |||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||    
T  2362861 tatataatttcctttttcatatccttaaccattgcaccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 2362946 - 2362880
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcct 69  Q
    |||||||||||||  ||||||| |||||||||||  |||||||||||||||||| |||||| ||||||    
T  2362946 aaactgtttttgattttattatcaattaattacactatttcaatgcattaacta-tatataatttcct 2362880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 23925359 - 23925280
Alignment:
Q  38 atttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc-gggggcaccggttagcatttccc 116  Q
    |||| |||||||||| ||||||||| |||||||||| |||  |||||||||| ||| ||||| ||| |||||||||||||    
T  23925359 attttaatgcattaattactatataatttccttttttatattcttaaccagttccccgggggtaccagttagcatttccc 23925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 6842642 - 6842604
Alignment:
Q  18 tattataaattaattacataatttcaatgcattaactac 56  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6842642 tattataaattaattacacaatttcaatgcattaactac 6842604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 27994394 - 27994486
Alignment:
Q  26 attaattacataattt-caatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttccc 116  Q
    |||||||||||||||| || | |||||| ||||||| | |||| |||||  || |||||||||||| |||||||||| |||||| ||||||||    
T  27994394 attaattacataattttcactacattaattactataaaatttcttttttagtatccttaaccagtgccccgggggcatcggttaacatttccc 27994486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 21010092 - 21010041
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttccttttt 73  Q
    |||||||||||||| | ||||||||||  |||||||||||||| ||||||||||    
T  21010092 ttataaattaattatacaatttcaatg--ttaactactatataatttccttttt 21010041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 52552587 - 52552549
Alignment:
Q  4 actgtttttgacattattataaattaattacataatttc 42  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  52552587 actgtttttgactttattataaattaattacacaatttc 52552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 21595962 - 21595848
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  21595962 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactcctatataatttcctttttcatacccttaaccagtgcccgggggca 21595863  T
Q  101 ccggttagcatttcc 115  Q
    |||||||||||||||    
T  21595862 ccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30675642 - 30675758
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  30675642 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggc 30675741  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  30675742 accggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 168582 - 168463
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||    
T  168582 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggc 168483  T
Q  100 accggttagcatttcccttt 119  Q
    ||||||||||||||||||||    
T  168482 accggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 12203970 - 12203849
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||    
T  12203970 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggtacccgggggca 12203871  T
Q  101 ccggttagcatttccctttttt 122  Q
    ||||||||||||||||| ||||    
T  12203870 ccggttagcatttccctatttt 12203849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 12448398 - 12448277
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||    
T  12448398 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggtacccgggggca 12448299  T
Q  101 ccggttagcatttccctttttt 122  Q
    ||||||||||||||||| ||||    
T  12448298 ccggttagcatttccctatttt 12448277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 16888614 - 16888728
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  16888614 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgcccgggggca 16888713  T
Q  101 ccggttagcatttcc 115  Q
    |||||||||||||||    
T  16888714 ccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 33357199 - 33357323
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  33357199 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggggc 33357298  T
Q  100 accggttagcatttcccttttttta 124  Q
    ||| ||||||||||||||| |||||    
T  33357299 accagttagcatttcccttatttta 33357323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4648310 - 4648193
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||| |||||||| ||| ||    
T  4648310 gaaactgtttttgacattattataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaatcagtgccccgggaca 4648211  T
Q  101 ccggttagcatttccctt 118  Q
    ||||||||||||||||||    
T  4648210 ccggttagcatttccctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27988569 - 27988687
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||| ||||| |||    
T  27988569 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggc 27988668  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  27988669 accggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28045871 - 28045989
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||| ||||| |||    
T  28045871 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggc 28045970  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  28045971 accggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 13643121 - 13643009
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtt 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||    
T  13643121 tttttgactttattataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggtt 13643022  T
Q  107 agcatttcccttt 119  Q
    ||||||| |||||    
T  13643021 agcattttccttt 13643009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 13743546 - 13743434
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtt 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||    
T  13743546 tttttgactttattataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggtt 13743447  T
Q  107 agcatttcccttt 119  Q
    ||||||| |||||    
T  13743446 agcattttccttt 13743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4537814 - 4537932
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||| ||| |||||||||||| ||||| |||    
T  4537814 gaaactgtttttgactttattatcaattaattacataatttcaatgcattaactactatataatttcctattttatatccttaaccagtgccccggaggc 4537913  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  4537914 accggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 37373320 - 37373206
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||| ||| ||||||| ||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||| ||||||||||    
T  37373320 aaactgttttcgactttattatcaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgtccgggggcac 37373221  T
Q  102 cggttagcatttccc 116  Q
    |||||||||||||||    
T  37373220 cggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16785202 - 16785085
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||| |||| ||||||||| ||||||||||||||| || |||    
T  16785202 gaaactgtttttgactttattataaattaattacacaatttcaatacattaactgctatataatttcttttttcatatccttaaccagtgccctggagca 16785103  T
Q  101 ccggttagcatttccctt 118  Q
    ||||||||||||||||||    
T  16785102 ccggttagcatttccctt 16785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 11112754 - 11112638
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||  |||    
T  11112754 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccggatgca 11112655  T
Q  101 ccggttagcatttccct 117  Q
    || ||||||||||||||    
T  11112654 ccagttagcatttccct 11112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 34228798 - 34228682
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||| |||||    
T  34228798 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggc 34228699  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  34228698 accggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36730560 - 36730444
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |||| || ||||||    
T  36730560 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtgtcctggggca 36730461  T
Q  101 ccggttagcatttccct 117  Q
    || ||||||||| ||||    
T  36730460 ccagttagcattcccct 36730444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 20831623 - 20831737
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||| ||||||| ||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  20831623 gaaactgcttttgactttattataaattaattatactatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccgggggc 20831722  T
Q  100 accggttagcatttc 114  Q
    |||||||||||||||    
T  20831723 accggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 9063127 - 9063239
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggt 105  Q
    |||||||||| |||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| | ||| |||||||    
T  9063127 tgtttttgactttattataaattaattgcacgatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggacaccggt 9063226  T
Q  106 tagcatttccctt 118  Q
    |||||||||||||    
T  9063227 tagcatttccctt 9063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16394131 - 16394247
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||| ||| |||||||| | |||||||||||| |||||||||    
T  16394131 gaaactgtttttgactttattatcaattaattacattatttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggc 16394230  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  16394231 accggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 29444211 - 29444331
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||| ||||| |||||| |||    
T  29444211 aaactgtttttgactttattataaattaattacacaatttcaatgcgttaactactatataatttcctttttcatatccttaatcagtgccccgggagca 29444310  T
Q  101 ccggttagcatttcccttttt 121  Q
    ||||||| ||||| |||||||    
T  29444311 ccggttaacattttccttttt 29444331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3930303 - 3930419
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||| |||||| |||||||   ||||| ||||||||||||||    
T  3930303 gaaactgtttttgactttattatcaattaattacacaacttcaatgcattaactactatataatttcctctttcatattattaactagtgcccgggggca 3930402  T
Q  101 ccggttagcatttccct 117  Q
    ||| |||||||||||||    
T  3930403 ccgattagcatttccct 3930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 43119332 - 43119216
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| | |||| ||||| |||| |||||    
T  43119332 aaactgtttttgactttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatctttaatcagtgccccgagggca 43119233  T
Q  101 ccggttagcatttccct 117  Q
    |||||||||||||||||    
T  43119232 ccggttagcatttccct 43119216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 42035056 - 42035154
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccg 103  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  42035056 tgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccg 42035154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 40831388 - 40831272
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggt 105  Q
    |||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||   |||||| |||    
T  40831388 tgtttttgactttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatctttaaccagtgcc---gggcactggt 40831292  T
Q  106 tagcatttccctttttttat 125  Q
    ||||||||||||| ||||||    
T  40831291 tagcatttcccttcttttat 40831272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2805330 - 2805446
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||| ||||||| ||||||||  ||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  2805330 gaaactgcttttgactttattataggttaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgtcccgggggc 2805429  T
Q  100 accggttagcatttccc 116  Q
    || ||||| ||||||||    
T  2805430 actggttaacatttccc 2805446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16890550 - 16890666
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||  ||||||     |     
T  16890550 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactggtgccc-----ct 16890644  T
Q  101 ccggttagcatttccctttttt 122  Q
    ||||||||||||||||| ||||    
T  16890645 ccggttagcatttccctatttt 16890666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 7304588 - 7304711
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||   |||| | | ||| |    
T  7304588 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatcctta---agtgtctcagggac 7304684  T
Q  100 accggttagcatttccctttttttatt 126  Q
    |||||||| ||||||||||||| ||||    
T  7304685 accggttaacatttccctttttctatt 7304711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32114024 - 32113908
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    |||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| ||||||||| | | |||| | |    
T  32114024 gaaactgttttttactttattataaattaattaaacaatttcaatgcattaactactatataatttcctttttcatatccttaaccaatactccggagac 32113925  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||| ||||    
T  32113924 accggttagcatctccc 32113908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22956821 - 22956730
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| | ||||||||| |||| ||||||||||||||    
T  22956821 gaaactgtttttgacattattataaattaattacataattttaatgtattaactaccatat-gattccttttttatactcttaaccagtgccc 22956730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28626884 - 28626792
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||||||| |||||||||||| | |||||||| ||||||    
T  28626884 gaaactgtttttgactttattataaattaatcacacaatttcaatacattaactactatataatttcctttttcacatccttaaccggtgccc 28626792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 9278317 - 9278210
Alignment:
Q  12 tgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagca 110  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||| |||| ||| | |||||| |||||||    
T  9278317 tgactttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatctttaacgagtgtccctgaggcaccagttagca 9278218  T
Q  111 tttccctt 118  Q
    ||||||||    
T  9278217 tttccctt 9278210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9253972 - 9254068
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccggggg 98  Q
    ||||||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||| | |||| ||||||||| ||||||||||||||| ||||    
T  9253972 gaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgccccgggg 9254068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 12652707 - 12652630
Alignment:
Q  40 ttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccggttagcatttccc 116  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccaggggcaccggttagcatttccc 12652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 9537910 - 9537982
Alignment:
Q  17 ttattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt 89  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||    
T  9537910 ttattataaattaattacacaattttaatgcattaactactatataatttcctttttcatatccttaaccagt 9537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 34192884 - 34192815
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcata 77  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  34192884 tttttgactttattataaattaattacacaatttcaatgcattaactagtatataatttcctttttcata 34192815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 10618123 - 10618016
Alignment:
Q  12 tgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc-gggggcaccggttagca 110  Q
    |||| ||||||| ||||||||||| ||||| | |||||||||||||||||| ||| |||||||||| |||||||| ||||||  | ||||||||||||||    
T  10618123 tgactttattatcaattaattacacaatttaattgcattaactactatataattttctttttcatatccttaacctgtgccctagaggcaccggttagca 10618024  T
Q  111 tttccctt 118  Q
    ||| ||||    
T  10618023 ttttcctt 10618016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10870468 - 10870357
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||| |||||||| |||||| ||| |||||| ||| | |||||||    ||||||  |    
T  10870468 gaaactgtttttgattttattataaattaattacacaatttcaatgtattaactattatataattttcttttttatatcattaacca----ccggggata 10870373  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  10870372 ccggttagcatttccc 10870357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 29235344 - 29235235
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccggtt 106  Q
    |||||||  ||||||||||||||||||| || || |||||||||||||||||||| |||| ||||| ||| |||||| || ||| |||||  ||||||||    
T  29235344 tttttgattttattataaattaattacacaaatttaatgcattaactactatataatttctttttttatatccttaatcaatgctccgggaacaccggtt 29235245  T
Q  107 agcatttccc 116  Q
    ||||||||||    
T  29235244 agcatttccc 29235235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 17467719 - 17467595
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||| |||||||||  ||||||| ||||||||||| |||||||||||||||| ||||  ||| |||||||||||||| | ||||| ||||   ||||||     
T  17467719 gaaattgtttttgattttattatcaattaattacacaatttcaatgcattaattactgcataatttcctttttcatatcattaactagtgtttcgggggt 17467620  T
Q  100 accggttagcatttcccttttttta 124  Q
    |||||||||||||| |||| |||||    
T  17467619 accggttagcattttccttgtttta 17467595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 42433615 - 42433685
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttccttttt 73  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  42433615 aaactgtttttgacttt-ttataaattaattacacaatttcaatgcattaactattatataatttccttttt 42433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39406958 - 39406905
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaact 54  Q
    ||||||||||||||| ||||||||||||||||||| ||||| || |||||||||    
T  39406958 gaaactgtttttgactttattataaattaattacacaattttaacgcattaact 39406905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 22451881 - 22451839
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatata 62  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  22451881 ttataaattaattacacaatttcaatgcattaactgctatata 22451839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 30933410 - 30933452
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatata 62  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  30933410 ttataaattaattacacaatttcaatgcattaattactatata 30933452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 39751605 - 39751658
Alignment:
Q  64 tttcctttttcatacccttaaccagtgccc-gggggcaccggttagcatttccc 116  Q
    ||||||||||  || ||||||||||||||| |||||||||||||||||||||||    
T  39751605 tttcctttttattatccttaaccagtgccccgggggcaccggttagcatttccc 39751658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24843349 - 24843393
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaat 45  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||    
T  24843349 gaaactgattttgactttattataaattaattacacaatttcaat 24843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 36923782 - 36923849
Alignment:
Q  50 taactactatatagtttcctttttcatacccttaaccagtgcc-cgggggcaccggttagcatttccc 116  Q
    |||||| |||||| |||||||||||||| |||||| ||||||| ||| |||| ||||||| |||||||    
T  36923782 taactattatataatttcctttttcatatccttaatcagtgcctcggaggcagcggttagtatttccc 36923849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 27988536 - 27988506
Alignment:
Q  80 cttaaccagtgcccgggggcaccggttagca 110  Q
    |||||||||||||||||||||||||||||||    
T  27988536 cttaaccagtgcccgggggcaccggttagca 27988506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 28045838 - 28045808
Alignment:
Q  80 cttaaccagtgcccgggggcaccggttagca 110  Q
    |||||||||||||||||||||||||||||||    
T  28045838 cttaaccagtgcccgggggcaccggttagca 28045808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 18955857 - 18955894
Alignment:
Q  91 cccgggggcaccggttagcatttccctttttttattta 128  Q
    |||||||||||||||||||||  |||||||||||||||    
T  18955857 cccgggggcaccggttagcatgaccctttttttattta 18955894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 29566793 - 29566700
Alignment:
Q  26 attaattacataattt-caatgcattaactactatatagtttcctttttcat-acccttaaccagtgccc-gggggcaccggttagcatttccc 116  Q
    |||||||| ||||||| ||||||| ||| ||  ||||| ||||| |||| || | |||||||| |||||| |||||||||||||||||||||||    
T  29566793 attaattaaataattttcaatgcaataattaacatataatttccctttttattatccttaacccgtgccccgggggcaccggttagcatttccc 29566700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 16063689 - 16063733
Alignment:
Q  80 cttaaccagtgcccgggggcaccggttagcatttcccttttttta 124  Q
    |||||||| ||||||||||||| || ||||||||||||| |||||    
T  16063689 cttaaccaatgcccgggggcactggatagcatttcccttatttta 16063733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6580305 - 6580188
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  6580305 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccccggggc 6580206  T
Q  100 accggttagcatttccct 117  Q
    || |||||||||||||||    
T  6580205 actggttagcatttccct 6580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4381911 - 4381798
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  4381911 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcaccgggggc 4381812  T
Q  100 accggttagcattt 113  Q
    ||||||||||||||    
T  4381811 accggttagcattt 4381798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 561588 - 561712
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  561588 gaaactgattttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggc 561687  T
Q  100 accggttagcatttcccttttttta 124  Q
    |||||||||||||||||||||||||    
T  561688 accggttagcatttcccttttttta 561712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3668183 - 3668295
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  3668183 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttccttttccatacccttaaccagtgtccgggggca 3668282  T
Q  101 ccggttagcattt 113  Q
    |||||||||||||    
T  3668283 ccggttagcattt 3668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27856466 - 27856584
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||    
T  27856466 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccccgggggc 27856565  T
Q  100 accggttagcatttccctt 118  Q
    |||||||| ||||||||||    
T  27856566 accggttaacatttccctt 27856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 31390128 - 31390003
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| |||| ||||| |||    
T  31390128 gaaactgtttttgactttattataaattaattacataatttcaatacattaactactatataatttcctttttcatatccttaactagtgccccggaggc 31390029  T
Q  100 accggttagcatttccctttttttat 125  Q
    ||| ||||||||||||||| ||||||    
T  31390028 accagttagcatttcccttattttat 31390003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31438762 - 31438646
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||||| |||||| ||    
T  31438762 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggagc 31438663  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  31438662 accggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20553047 - 20552931
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||| |||||    
T  20553047 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggc 20552948  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  20552947 accggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 34442603 - 34442719
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | | |||||||||| |||||||  |||||| |||||||    
T  34442603 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatcttctttttcatatccttaacatgtgccccggggcac 34442702  T
Q  102 cggttagcatttccctt 118  Q
    |||||||||||||||||    
T  34442703 cggttagcatttccctt 34442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43637280 - 43637165
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |  ||||||    
T  43637280 gaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttattcatatccttaaccagtgtctcggggca 43637181  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  43637180 ccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 26891733 - 26891859
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| ||| |||||| ||||| |||||||||    
T  26891733 gaaactatttttgactttattataaattaattacacaatttcaatgcattaactaatatataatttccttttttatatccttaatcagtgtcccgggggc 26891832  T
Q  100 accggttagcatttccctttttttatt 126  Q
    |||||||||||||||||| || |||||    
T  26891833 accggttagcatttccctattattatt 26891859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30486326 - 30486208
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||  ||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  30486326 gaaactgtttttgactttattatagtttaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgccccgggggc 30486227  T
Q  100 accggttagcatttccctt 118  Q
    ||| |||||||||||||||    
T  30486226 accagttagcatttccctt 30486208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 2898186 - 2898069
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||  | ||| |||    
T  2898186 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaaccagtgttccgggacac 2898087  T
Q  102 cggttagcatttcccttt 119  Q
    |||||| |||||||||||    
T  2898086 cggttaacatttcccttt 2898069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22887866 - 22887749
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| || ||||| |||    
T  22887866 gaaactgtttttaactttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatccttaaccactgccccggaggc 22887767  T
Q  100 accggttagcatttccct 117  Q
    | ||||||||||||||||    
T  22887766 atcggttagcatttccct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44588018 - 44587902
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||| ||| |||||||| ||| |||||||||    
T  44588018 gaaactgttttttactttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatccttaaccggtgccccgggggc 44587919  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  44587918 accggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 32860218 - 32860100
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||| |||||||| ||| ||| |||||    
T  32860218 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaaatactatataatttccttttttatatccttaacccgtgcccccggggc 32860119  T
Q  100 accggttagcatttccctt 118  Q
    |||||||| ||||||||||    
T  32860118 accggttaacatttccctt 32860100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32360939 - 32361056
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||| || |||||||||||||||||| |||||| ||| |||||||| | |||||||||||| |||||||||    
T  32360939 gaaactgtttttgactttattatcaattaattatattatttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggc 32361038  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  32361039 accggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 1859277 - 1859161
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggca 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| ||||| ||| ||||||||| |  ||||||||||    
T  1859277 aaactgtttttgactttattataaattaattacataatttcaatgcattaactactatacaatttctttttttatatccttaaccattaccccgggggca 1859178  T
Q  101 ccggttagcatttccct 117  Q
    || ||||||||||||||    
T  1859177 ccagttagcatttccct 1859161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8969477 - 8969591
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||| ||||||    
T  8969477 gaaactgcttttgactttattataaattaattacactatttcaatgcattaactactatataattttctttttcatatccttaactagtgccc-ggggca 8969575  T
Q  101 ccggttagcatttccc 116  Q
    | ||||||||||||||    
T  8969576 ctggttagcatttccc 8969591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 26387139 - 26387257
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccgg 104  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| ||| |  ||| |||||| |    
T  26387139 tgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtacttcggaggcaccag 26387238  T
Q  105 ttagcatttcccttttttt 123  Q
    |||||||||||||| ||||    
T  26387239 ttagcatttcccttatttt 26387257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38296293 - 38296178
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||| ||| |||||||||| | |||||||||||||   | ||    
T  38296293 gaaactgtttttgactttattataaattaattacacaatttcaatgtattaattactatataattttctttttcatatctttaaccagtgccccaagaca 38296194  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  38296193 ccggttagcatttccc 38296178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22068390 - 22068507
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||| | |||||||||||| ||||||||||||| || ||||||||||| |||||||||||| |||||||||    
T  22068390 gaaactgtttttgactttattatcaattaattatacaatttcaatgca-taactactatataattccctttttcatatccttaaccagtgccccgggggc 22068488  T
Q  100 accggttagcatttccctt 118  Q
    ||  |||||||||||||||    
T  22068489 acttgttagcatttccctt 22068507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 38590945 - 38591062
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||| ||||||||||| ||||| ||| ||||||||||| |||| ||||||||||||||  ||||||||||| ||| ||| ||    
T  38590945 aaactgtttttgactttattatcaattaattacacaattttaatacattaactactgtataatttcctttttcatattcttaaccagtgccccagggaca 38591044  T
Q  101 ccggttagcatttccctt 118  Q
    ||||||||||||||||||    
T  38591045 ccggttagcatttccctt 38591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 22567711 - 22567595
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtt 106  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||||| |||||||||||| |   |||||| | |||    
T  22567711 tttttgactttattataaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtgtcttaggggcatcagtt 22567612  T
Q  107 agcatttcccttttttt 123  Q
    |||||||||||||||||    
T  22567611 agcatttcccttttttt 22567595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 11021293 - 11021410
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||| |||| ||||||||| | |||| |||||| | | |||||    
T  11021293 aaactgtttttgactttattatatattaattacacaatttcaatgcattaactaccatataatttcttttttcatatctttaatcagtgctccgaggcac 11021392  T
Q  102 cggttagcatttcccttt 119  Q
    | |||| |||||||||||    
T  11021393 cagttaacatttcccttt 11021410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13574099 - 13574211
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||| |  |||||| |||||||||||||| ||||||||||| |||  |||||    
T  13574099 gaaactgtttttgactttattataaattaattacacaatttcaatacattaatttttatatattttcctttttcatatccttaaccagtaccc-agggca 13574197  T
Q  101 ccggttagcatttc 114  Q
    || |||||||||||    
T  13574198 cctgttagcatttc 13574211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 35851821 - 35851913
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc 93  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||| |||||||||||| | |||||||| ||||||    
T  35851821 gaaactgtttttgactttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaaccggtgccc 35851913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5881337 - 5881221
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcat----taactactatatagtttcctttttcatacccttaaccagtgcccggg 96  Q
    |||||| |||||||| ||||||| ||||||||||| |||||||||||||    ||||||||||||| |||||||||||||| |||||||| |||| | ||    
T  5881337 gaaactctttttgactttattatcaattaattacacaatttcaatgcatgcattaactactatataatttcctttttcatatccttaacctgtgctccgg 5881238  T
Q  97 ggcaccggttagcattt 113  Q
    | |||||||||||||||    
T  5881237 gacaccggttagcattt 5881221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 28601082 - 28600971
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||||||| || ||||||| ||||||||| | ||||||||||||| ||||||| |||| || ||||||||||| |||||||||||||||  |||||    
T  28601082 gaaactgtttttaactttattatcaattaattatacaatttcaatgcat-aactactttataattccctttttcatatccttaaccagtgcccccgggca 28600984  T
Q  101 ccggttagcattt 113  Q
    | |||||||||||    
T  28600983 ctggttagcattt 28600971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 5093617 - 5093724
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggttag 108  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||| ||||||| ||||| | | |  ||| |||||    
T  5093617 ttttgactttattataaattaattacacaattttaatgcattaactactatttaatttcctttttcatatccttaactagtgctccgagaaaccagttag 5093716  T
Q  109 catttccc 116  Q
    ||||||||    
T  5093717 catttccc 5093724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 25782908 - 25783018
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggt 105  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||   |||||||| ||||||||||||||  |||||| |||| |  |||||||||||    
T  25782908 tgtttttgactttattataaaataattacacaatttcaatgcatta---actatataatttcctttttcatattcttaactagtgtcttggggcaccggt 25783004  T
Q  106 tagcatttcccttt 119  Q
    |||||||| |||||    
T  25783005 tagcattttccttt 25783018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4022549 - 4022666
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggc 99  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||| || |||| |||||||||  ||||| ||||  |||| ||||    
T  4022549 gaaactgtttctgactttattataaattaattacagaatttcaatacattaactactat-taatttcttttttcatattcttaatcagtatcccgtgggc 4022647  T
Q  100 accggttagcatttccctt 118  Q
    ||| |||||||||||||||    
T  4022648 accagttagcatttccctt 4022666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27584854 - 27584769
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaacc 86  Q
    ||||||| ||||||  ||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| ||||||||    
T  27584854 gaaactgcttttgattttattataaattaattacacaatttcaatgctttaactactatataatttcccttttcatatccttaacc 27584769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 29102354 - 29102471
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| ||||||||||||||||| | |||||||||| ||||||  ||||||| ||| |||||| |||  |||||||| || || |||  ||    
T  29102354 aaactgtttttgactttattataaattaattataaaatttcaatgtattaaccgctatataattttctttttgatattcttaaccaatgtcccgggatac 29102453  T
Q  102 cggttagcatttcccttt 119  Q
    |||| |||||||||||||    
T  29102454 cggtcagcatttcccttt 29102471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15079029 - 15079145
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||| |||||||||| || |||||||||||||||| ||||||||| |||||||||||||||| ||||||||||   |  ||||| || |   ||||||||    
T  15079029 gaaattgtttttgacttt-ttataaattaattacacaatttcaatacattaactactatataatttcctttttagcatgcttaatcaataaacgggggca 15079127  T
Q  101 ccggttagcatttccctt 118  Q
    ||||||||||||| ||||    
T  15079128 ccggttagcattttcctt 15079145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34123095 - 34123211
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggc 99  Q
    ||||||||||||||| || |||||||||||||||| || ||||| |||||||||| |||||| |||| |||||  ||  || |||||||  ||||| |||    
T  34123095 gaaactgtttttgacttt-ttataaattaattacacaaattcaaagcattaactattatataatttcttttttagtatgctcaaccagtaccccggaggc 34123193  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  34123194 accggttagcatttccct 34123211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 39531921 - 39531868
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttccttttt 73  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  39531921 ttataaattaattacacaatttcaatgcattaactactatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 44854387 - 44854310
Alignment:
Q  39 tttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 116  Q
    |||||||||| ||| || |||||| ||||||||||  || ||||||||||  ||||||||||||||||||||||||||    
T  44854387 tttcaatgcaataattaatatataatttcctttttattatccttaaccaggacccgggggcaccggttagcatttccc 44854310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 25772220 - 25772112
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaacta-ctatatagtttcctttttcatacccttaaccagtgcccgggggcaccggtt 106  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||| ||  | |||| ||||||||||||||  |||||| ||||  ||| | ||||| ||    
T  25772220 tttttgactttattataaattaattacacaatttcattgcattaattatttttataatttcctttttcatattcttaactagtgttcggagacaccgatt 25772121  T
Q  107 agcatttcc 115  Q
    | |||||||    
T  25772120 aacatttcc 25772112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 45261942 - 45261891
Alignment:
Q  79 ccttaaccagtgccc--gggggcaccggttagcatttccctttttttattta 128  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  45261942 ccttaaccagtgccctggggggcaccggttagcatttcccttgttttattta 45261891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 44854448 - 44854533
Alignment:
Q  39 tttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttcccttttttt 123  Q
    |||||||||| ||| ||  ||||| ||||||||||  || |||||||||||| |||||| | ||||||||||||||||||| ||||    
T  44854448 tttcaatgcaataattaacatataatttcctttttattatccttaaccagtgccccgggagtaccggttagcatttcccttatttt 44854533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 26270019 - 26269987
Alignment:
Q  82 taaccagtgcccgggggcaccggttagcatttc 114  Q
    |||||||||||||||||||||||||||||||||    
T  26270019 taaccagtgcccgggggcaccggttagcatttc 26269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 28012066 - 28012140
Alignment:
Q  43 aatgcattaactactatatagttt-cctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 116  Q
    |||||| ||| ||||||||| ||| ||||||| ||| |||||||||||  || ||||||||||||| ||||||||    
T  28012066 aatgcaataattactatataattttcctttttaatatccttaaccagtatcccggggcaccggttatcatttccc 28012140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 16807332 - 16807409
Alignment:
Q  39 tttcaatgcattaactactatatagtttccttttt-catacccttaaccagtgcc-cgggggcaccggttagcatttc 114  Q
    |||||||||| ||||||||||||| ||| ||||||  | | ||||||||| |||| ||| ||||||||||||||||||    
T  16807332 tttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 16846613 - 16846690
Alignment:
Q  39 tttcaatgcattaactactatatagtttccttttt-catacccttaaccagtgcc-cgggggcaccggttagcatttc 114  Q
    |||||||||| ||||||||||||| ||| ||||||  | | ||||||||| |||| ||| ||||||||||||||||||    
T  16846613 tttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 38702004 - 38702117
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  38702004 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggagca 38702103  T
Q  101 ccggttagcatttc 114  Q
    ||||||||||||||    
T  38702104 ccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 18043277 - 18043155
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||    
T  18043277 aaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttccttttttatacccttaaccagtgccccggaggca 18043178  T
Q  101 ccggttagcatttcccttttttt 123  Q
    |||||||||||||||||||||||    
T  18043177 ccggttagcatttcccttttttt 18043155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29210529 - 29210412
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||    
T  29210529 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggc 29210430  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  29210429 accggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17333352 - 17333467
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  17333352 gaaactgtttttgactttattatgaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccgggggca 17333451  T
Q  101 ccggttagcatttccc 116  Q
    ||||||||||||||||    
T  17333452 ccggttagcatttccc 17333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 42770060 - 42770178
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  42770060 gaaactgtttttgatattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccgggggc 42770159  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  42770160 accggttagcatttccctt 42770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38162966 - 38162850
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||    
T  38162966 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgccccggaggc 38162867  T
Q  100 accggttagcatttccc 116  Q
    |||||||| ||||||||    
T  38162866 accggttaacatttccc 38162850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14350347 - 14350465
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||| ||||||||    
T  14350347 gaaattgtttttgacattattataaattaattacacaattttaatgcattaactacaatataatttcctttttcatacccttaaccggtgctccgggggc 14350446  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  14350447 accggttagcatttccctt 14350465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 30657723 - 30657598
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||  |||||| |||| |||||| |||    
T  30657723 aaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatgcttaactagtgccccgggagca 30657624  T
Q  101 ccggttagcatttccctttttttatt 126  Q
    |||||||||||||||||||| |||||    
T  30657623 ccggttagcatttcccttttattatt 30657598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30294451 - 30294567
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| |||||| |    
T  30294451 gaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccaatgctccggggac 30294550  T
Q  100 accggttagcatttccc 116  Q
    |||| ||||||||||||    
T  30294551 accgattagcatttccc 30294567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 51065818 - 51065942
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||| |||||||||| |||||||||||| ||||||| |    
T  51065818 gaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttactttttcatatccttaaccagtgtcccggggac 51065917  T
Q  100 accggttagcatttcccttttttta 124  Q
    |||||||||||||||||||| ||||    
T  51065918 accggttagcatttccctttcttta 51065942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 51368855 - 51368974
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc-gggggc 99  Q
    |||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||     
T  51368855 gaaactatttttgacattattataaattaactacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtaccctggaggt 51368954  T
Q  100 accggttagcatttcccttt 119  Q
    ||||||||||||||||||||    
T  51368955 accggttagcatttcccttt 51368974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29657887 - 29657770
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||||||||| |||||||||| ||| |||||||||||| |||||||||    
T  29657887 gaaactgtttttgactttattatcaattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccccgggggc 29657788  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  29657787 accggttagcatttccct 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 3097774 - 3097659
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggca 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  | |||||||||    
T  3097774 aaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcctttttcatatccttaaccaggactccgggggca 3097675  T
Q  101 ccggttagcatttccc 116  Q
    ||  ||||||||||||    
T  3097674 ccaattagcatttccc 3097659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 24178533 - 24178656
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||| ||||||| |||||||| |||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  24178533 gaaactgcttttgactttattatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccgggggc 24178632  T
Q  100 accggttagcatttcccttttttt 123  Q
    | ||||||||||||||| ||||||    
T  24178633 atcggttagcatttcccatttttt 24178656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9266798 - 9266916
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc-cgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| ||||| |    
T  9266798 gaaactgtttttgactttattatgaattaattacacaatttcaatgcattaaatactatataatttcctttttcatatccttaaccagtgccgcggggac 9266897  T
Q  100 accggttagcatttccctt 118  Q
    |||||||| ||||||||||    
T  9266898 accggttaacatttccctt 9266916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 12072133 - 12072251
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggca 100  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||| ||| ||||||||||    
T  12072133 aaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactacataatttcctttttcatatccttaaccggtgccccgggggca 12072232  T
Q  101 ccggttagcatttcccttt 119  Q
    ||||||||||||| |||||    
T  12072233 ccggttagcattttccttt 12072251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15227855 - 15227737
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||| ||||     
T  15227855 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggt 15227756  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||||||||    
T  15227755 accggttagcatttccctt 15227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5694437 - 5694321
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||| ||| |||||||||||| ||||| |||    
T  5694437 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttccctttttatatccttaaccagtgccccggaggc 5694338  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  5694337 accggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45431394 - 45431278
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||| |||  || |||||||    
T  45431394 gaaactatttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaatcaggccctgggggca 45431295  T
Q  101 ccggttagcatttccct 117  Q
    |||||||||||||||||    
T  45431294 ccggttagcatttccct 45431278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 47010109 - 47009989
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| ||||  ||    
T  47010109 gaaactgtttttgaatttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgctccggatgc 47010010  T
Q  100 accggttagcatttccctttt 120  Q
    |||| ||||||||||||||||    
T  47010009 accgattagcatttccctttt 47009989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 48071598 - 48071482
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| |||| ||||||||||| ||| || |||    
T  48071598 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattatataatttccttttacatatccttaaccagtaccccggagca 48071499  T
Q  101 ccggttagcatttccct 117  Q
     ||||||||||||||||    
T  48071498 tcggttagcatttccct 48071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 35985691 - 35985813
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| |||||| |||||  | ||||||    
T  35985691 gaaactgtttttcactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaacagtgatccggggca 35985790  T
Q  101 ccggttagcatttcccttttttt 123  Q
    ||||||| |||||||||| ||||    
T  35985791 ccggttaacatttcccttatttt 35985813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13961327 - 13961200
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||  ||||| ||| |||||||| ||| |||||||||    
T  13961327 gaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataattt-tttttttatatccttaacccgtgccccgggggc 13961229  T
Q  100 accggttagcatttccctttttttattta 128  Q
    |||||||||||||||||| | ||||||||    
T  13961228 accggttagcatttccctatctttattta 13961200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 3784788 - 3784899
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccgg 104  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| | ||||||||||     
T  3784788 tgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcactgggggcaccga 3784887  T
Q  105 ttagcatttccc 116  Q
    || |||||||||    
T  3784888 tttgcatttccc 3784899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6770453 - 6770334
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||  |||| ||||| |||    
T  6770453 gaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaattagtgccccggaggc 6770354  T
Q  100 accggttagcatttcccttt 119  Q
    ||||||||||  ||||||||    
T  6770353 accggttagccattcccttt 6770334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 29683312 - 29683193
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcc-tttttcatacccttaaccagtg-cccggggg 98  Q
    ||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||||||| ||||| ||||| ||| | |||||||||| ||||||||    
T  29683312 gaaactgtttttgactttattataaattaattatacgatttcaatgcattaactactatataatttcctttttttatatctttaaccagtgccccggggg 29683213  T
Q  99 caccggttagcatttccctt 118  Q
    ||||||||||||||||||||    
T  29683212 caccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 36446395 - 36446517
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc-cgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||  ||||||||||||| |||||||    
T  36446395 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttt-atattcttaaccagtgcctcgggggc 36446493  T
Q  100 accggttagcatttcccttttttt 123  Q
    ||| |||| ||||||  |||||||    
T  36446494 accagttaacatttcttttttttt 36446517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19031885 - 19032002
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||  |||||||||||||| |||||||||||||| ||||||| | || ||| || ||    
T  19031885 gaaactgtttttgactttattataaattaattacacaatttcaatgttttaactactatataatttcctttttcatatccttaactaatgcccccggagc 19031984  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  19031985 accggttagcatttccct 19032002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 43286838 - 43286714
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||| |||||||| ||||||||||||||||||||||||||||  ||||||||| |||||| |||||||||||||| |||||||||||| ||| ||| |    
T  43286838 gaaactatttttgactttattataaattaattacataatttcaaaacattaactattatataatttcctttttcatatccttaaccagtgtcccagggac 43286739  T
Q  100 accggttagcatttcccttttttta 124  Q
    | |||||||||||| |||| |||||    
T  43286738 atcggttagcattttccttgtttta 43286714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 38335284 - 38335170
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||||||||| | |||||||||| ||   | |||    
T  38335284 aaactgtttttgactttattataaattaattacacaattacaatgcattaattactatataatttcctttttcatatctttaaccagtgtcccaagacac 38335185  T
Q  102 cggttagcatttccc 116  Q
    |||||||||||||||    
T  38335184 cggttagcatttccc 38335170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8472984 - 8473070
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaacca 87  Q
    ||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| |||||| |||||||||| ||| |||||||||    
T  8472984 gaaactgtttttgactttattataaattaattacacaattttaatgcattaactattatataatttccttttttatatccttaacca 8473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 26228293 - 26228187
Alignment:
Q  17 ttattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccggttagcatttcc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||  |||||||||||||  ||||||  |||||||||||| ||    
T  26228293 ttattataaattaattacataatttcaatgcattaactactatataatttcattttttatctccttaaccagtgcttcggggg--ccggttagcattacc 26228196  T
Q  116 cttttttta 124  Q
    ||| |||||    
T  26228195 cttgtttta 26228187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 48383181 - 48383294
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||   ||||| ||| |||||||| | |||||||||||| |||||| ||    
T  48383181 gaaactgtttttgactttattatcaattaattacattatttcaatacattaactttcatataattttctttttcacatccttaaccagtgccccgggagc 48383280  T
Q  100 accggttagcattt 113  Q
    ||||||||||||||    
T  48383281 accggttagcattt 48383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41730424 - 41730303
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcatta---actactatatagtttcctttttcatacccttaaccagtg-cccggg 96  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||||   ||||||||||| |||| |||||||||  ||||||| ||| ||| ||    
T  41730424 gaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattactactatataatttcttttttcatattcttaacccgtgcccctgg 41730325  T
Q  97 ggcaccggttagcatttccctt 118  Q
    |||||||||||  |||||||||    
T  41730324 ggcaccggttaagatttccctt 41730303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 15282591 - 15282672
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt 89  Q
    |||||||| ||||||||||||||||||| |||||||||  ||||||||||||||| ||| |||||||||| |||||||||||    
T  15282591 tttttgactttattataaattaattacacaatttcaatatattaactactatataattttctttttcatatccttaaccagt 15282672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 19011108 - 19011180
Alignment:
Q  43 aatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttcc 115  Q
    |||||||||||||||||||| |||||||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  19011108 aatgcattaactactatataatttcctttttcatatccttaacccgtgccccgggacaccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 39497416 - 39497340
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaa 84  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| ||| |||||||||| ||||||    
T  39497416 tttttgactttattataaattaattatataattttaatgcattaactactatataattttctttttcatatccttaa 39497340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 12307029 - 12306915
Alignment:
Q  5 ctgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccg 103  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||| ||| ||||||| || | ||||| || | ||| | |||||||    
T  12307029 ctgtttttgactttattataaattaattacacaatttcaatgtattaactac-atataattttctttttcgtatcattaactagagccccagaggcaccg 12306931  T
Q  104 gttagcatttcccttt 119  Q
    ||||||||||||||||    
T  12306930 gttagcatttcccttt 12306915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 37315339 - 37315409
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttccttttt 73  Q
    ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37315339 aaactgtctttgacttt-ttataaattaattacataatttcaatgcattaactactatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 47532748 - 47532857
Alignment:
Q  8 tttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccggtt 106  Q
    |||||||| ||||||| | ||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||| |||| | |||| | ||||||||    
T  47532748 tttttgactttattatca-ttaattacacaatttcaatgcattaactactatataattttctttttcatatccttaa-cagtactccggagacaccggtt 47532845  T
Q  107 agcatttccctt 118  Q
    ||||||||||||    
T  47532846 agcatttccctt 47532857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 50128242 - 50128325
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaa 84  Q
    ||||||| |||| || ||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||||||| ||||||    
T  50128242 gaaactgcttttaactttattataaattaattacacaatttcaatgcattaactactatgtaattttctttttcatatccttaa 50128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 30217877 - 30217763
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcc--tttttcatacccttaaccagtgcccgggggc 99  Q
    ||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||| | || || ||  ||||||||| ||||| ||||||||| || ||    
T  30217877 aaactatttttgactttattataaattaattaaataatttaaatgcattaactactctctaattccctttttttcatatccttagccagtgccc-ggagc 30217779  T
Q  100 accggttagcatttcc 115  Q
    | ||||||||||||||    
T  30217778 atcggttagcatttcc 30217763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 45449314 - 45449426
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||| ||||||| ||||||||| |||||||||  |||| |||||||||||||||||||| ||| |||||| ||| | ||||||| | ||| ||||||    
T  45449314 gaaactgcttttgactttattataatttaattacactattttaatgcattaactactatataattttcttttttatatctttaaccaataccccggggca 45449413  T
Q  101 ccggttagcattt 113  Q
     | ||||||||||    
T  45449414 tcagttagcattt 45449426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 23473550 - 23473648
Alignment:
Q  17 ttattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttc 114  Q
    ||||||||||||||||| | ||||||||| |||||||| ||||||| | |||||||||||| ||||||||| || ||| |||||| | |||||||||||    
T  23473550 ttattataaattaattatacaatttcaatacattaactgctatataatctcctttttcatatccttaaccaatgccccaggggcatcagttagcatttc 23473648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 39912368 - 39912469
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttccctt 118  Q
    |||||||||||| ||| ||||||||||||||||||| |||||| ||||| |||| ||| |||||| ||||| |||| | || ||||||| ||||||||||    
T  39912368 ttataaattaatcacacaatttcaatgcattaactagtatataatttccctttttatatccttaatcagtgccccgagtgcgccggttaacatttccctt 39912467  T
Q  119 tt 120  Q
    ||    
T  39912468 tt 39912469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 28481940 - 28481844
Alignment:
Q  17 ttattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccc-gggggcaccggttagcatttcc 115  Q
    ||||||||||||||||||| ||||| |||||||    |||| |||| |||||||||||||| |||||||||| ||||  | |||||||||||||||||||    
T  28481940 ttattataaattaattacacaattttaatgcat----tactgtataatttcctttttcatatccttaaccagggcccaagaggcaccggttagcatttcc 28481845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 35700739 - 35700836
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccctt 118  Q
    |||||||||||||||| |||||||||| |||||||||| |||| ||||||||||  || |||||||||||  || ||| |||| |||| ||||||||||    
T  35700739 ttataaattaattacacaatttcaatgtattaactactgtataatttcctttttagtatccttaaccagtatcc-gggacaccagttaacatttccctt 35700836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 3838856 - 3838936
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg 90  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||  ||  |||||||||||    
T  3838856 ttttgacatt-ttataaattaattacacaattttaatgcattaactattatataatttcctttttagtatgcttaaccagtg 3838936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 52431688 - 52431636
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatata 62  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  52431688 ttttgacatt-ttataaattaattacacaatttcaatgcattaactactatata 52431636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 10976004 - 10976092
Alignment:
Q  33 acataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc-cgggggcaccggttagcatttccctttt 120  Q
    ||||||||| |||||||||||||||||||| | |||||||||||| ||||||| |||||| | | | |||||| |||||||||| ||||    
T  10976004 acataattttaatgcattaactactatataatctcctttttcatatccttaacaagtgcctcagagacaccggctagcatttccttttt 10976092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 39081898 - 39081803
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 116  Q
    |||||||||||||| | ||||||||| ||||||||| |||||| |||| |||||  ||  |||||||||||||| ||  ||||||||||||||||||    
T  39081898 ttataaattaattataaaatttcaatacattaactagtatataatttcatttttagtatgcttaaccagtgccc-ggaacaccggttagcatttccc 39081803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 37503311 - 37503260
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttccttt 71  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  37503311 ttataaattaattacacaatttcaatgtattaactactatataatttccttt 37503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 28726013 - 28726094
Alignment:
Q  39 tttcaatgcattaactactatatagtttcctttttcat-acccttaaccagtgccc-gggggcaccggttagcatttccctt 118  Q
    |||||||||| ||| ||  ||||| |||||||||| || | ||||||||||||||| |||||||||||||||||||||||||    
T  28726013 tttcaatgcaataattaacatataatttccttttttattatccttaaccagtgccccgggggcaccggttagcatttccctt 28726094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 52749713 - 52749600
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccgg 104  Q
    ||||||| || ||||| |||||| | || | ||||||||| ||||||||| |||||| |||||||||||||| | ||||||| || |||| ||  | |||    
T  52749713 tgtttttaactttattgtaaatttagtatacaatttcaatacattaactattatataatttcctttttcatatctttaaccaatgccccgcggatatcgg 52749614  T
Q  105 ttagcatttccctt 118  Q
    ||||||||||||||    
T  52749613 ttagcatttccctt 52749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 19011057 - 19011095
Alignment:
Q  21 tataaattaattacataatttcaatgcattaactactat 59  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  19011057 tataaattaattacacaatttcaatgcattaactactat 19011095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 9413987 - 9414062
Alignment:
Q  39 tttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttc 114  Q
    ||||||| || ||| |||| |||| ||| |||||| ||| | ||||||| ||||| ||||||||||||||||||||    
T  9413987 tttcaattcaataattactgtataattttctttttaatatctttaaccaatgccccggggcaccggttagcatttc 9414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 38595860 - 38595939
Alignment:
Q  39 tttcaatgcattaactactatatagtttcctttttcat-acccttaaccagtgccc-gggggcaccggttagcatttccc 116  Q
    |||||||||| ||| ||  ||||| ||||| |||| || | ||||||||||||||| |||||||||||||||||||||||    
T  38595860 tttcaatgcaataattaacatataatttccctttttattatccttaaccagtgccccgggggcaccggttagcatttccc 38595939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 14350315 - 14350271
Alignment:
Q  80 cttaaccagtgcccgggggcaccggttagcatttcccttttttta 124  Q
    |||||||||||||| ||||||||||||||||   |||||||||||    
T  14350315 cttaaccagtgccccggggcaccggttagcaggacccttttttta 14350271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14881049 - 14881081
Alignment:
Q  1 gaaactgtttttgacattattataaattaatta 33  Q
    ||||||||||||||| |||||||||||||||||    
T  14881049 gaaactgtttttgactttattataaattaatta 14881081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 53755 - 53872
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  53755 gaaactatttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggc 53854  T
Q  100 accggttagcatttccct 117  Q
    ||||||||||||||||||    
T  53855 accggttagcatttccct 53872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 23077 - 22954
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggc 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  23077 gaaactgtttttgactttattataaattaattacacaatttcaatgtattaattactatataatttcctttttcatatccttaaccagtgctccgggggc 22978  T
Q  100 accggttagcatttcccttttttt 123  Q
    ||||||||||||||||||| ||||    
T  22977 accggttagcatttcccttgtttt 22954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 6180 - 6300
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  6180 gaaactgtttttgactttattataatttaattacacaattccaatgcattaactactatatagtttcctttttcatatccttaaccagtgccccaggggc 6279  T
Q  100 accggttagcatttccctttt 120  Q
    |||||||||||||||| ||||    
T  6280 accggttagcatttccttttt 6300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 408 - 292
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| |||||| ||| ||||||||||  |||||||||||||| ||||||    
T  408 gaaactgtttttgactttattataaatttattacacaatttcaatgcattaactattatataattttctttttcatatgcttaaccagtgccctggggca 309  T
Q  101 ccggttagcatttccct 117  Q
    |||||||| ||||||||    
T  308 ccggttaggatttccct 292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7967 - 8066
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  7967 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccgggggca 8066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7404 - 7305
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    |||||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  7404 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccgggggca 7305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 116320 - 116202
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    |||||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||| ||| |||||||||    
T  116320 gaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatctttaacctgtgccccgggggc 116221  T
Q  100 accggttagcatttccctt 118  Q
    |||||||||||||| ||||    
T  116220 accggttagcattttcctt 116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11040 - 11155
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| ||||||||  ||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||||||| || ||||||    
T  11040 gaaactgtttttgactttattatagtttaattacacaatttcaatgcattaactaatatataatttcctttttcatatccttaaccagtgtcc-ggggca 11138  T
Q  101 ccggttagcatttccct 117  Q
    || ||||||||||||||    
T  11139 ccagttagcatttccct 11155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 793 - 677
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggca 100  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| | |||||| |||| | |||||||    
T  793 aaacagtttttgactttattataaattaattacacaatttcaatggattaactactatataatttcctttttcatatctttaacccgtgctctgggggca 694  T
Q  101 ccggttagcatttccct 117  Q
    ||| |||||||||||||    
T  693 ccgattagcatttccct 677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15012 - 14896
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||| |||| ||||| ||| | |||||||||| ||||||| |    
T  15012 gaaactgtttttgactttattataaattaactacacaatttcagtgcattaactactatataatttctttttttatatctttaaccagtgccccggggac 14913  T
Q  100 accggttagcatttccc 116  Q
    |||||||||||||||||    
T  14912 accggttagcatttccc 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 95662 - 95777
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcc-cgggggcaccggtta 107  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| || |||||| ||||||||||||||  |||||||||| || |||||||||||||||    
T  95662 ttttgactttattataaattaattacataatttcaattcattaattattatataatttcctttttcatattcttaaccagtacctcgggggcaccggtta 95761  T
Q  108 gcatttcccttttttt 123  Q
    |||||| |||| ||||    
T  95762 gcattttccttatttt 95777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 68360 - 68478
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggc 99  Q
    ||||||| |||| || ||||||||| ||| ||||| ||||| |||||||||||||||||||| |||| ||||||||| |||||||||||| |||||||||    
T  68360 gaaactgattttaactttattataatttatttacacaattttaatgcattaactactatataatttcatttttcatatccttaaccagtgccccgggggc 68459  T
Q  100 accggttagcatttccctt 118  Q
    ||| |||||||||||||||    
T  68460 accagttagcatttccctt 68478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 146976 - 147093
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccag-tgcccgggggca 100  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||| ||   ||| || |||    
T  146976 aaactgtttttgactttattatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaactagaaccccaggagca 147075  T
Q  101 ccggttagcatttccctt 118  Q
    ||||||||||||||||||    
T  147076 ccggttagcatttccctt 147093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 933 - 825
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgc-ccgggggcaccggtta 107  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||| ||||  ||||||| ||    
T  933 ttttgactttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaactagtgctccggaagcaccggcta 834  T
Q  108 gcatttccc 116  Q
    |||||||||    
T  833 gcatttccc 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 69341 - 69248
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgg 95  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||| ||||||| |||||||||    
T  69341 aaactgcttttgactttattataaattaattacataattttaatgtattaactactatataatttactttttcatatccttaacgagtgcccgg 69248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 33770 - 33866
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 116  Q
    |||||||||||||||| |||||||||| |||||||| |||||| ||||| |||| |||  |||||| ||||| | | ||||  | ||||||||||||    
T  33770 ttataaattaattacacaatttcaatgtattaactattatataatttccattttaatatacttaacaagtgctccgaggcatggattagcatttccc 33866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 53421 - 53522
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcaccggt 105  Q
    |||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||| |||||||||||| | ||| ||| ||||    
T  53421 tgtttttgactttattataaattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgtctgggagcaacggt 53520  T
Q  106 ta 107  Q
    ||    
T  53521 ta 53522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 50656 - 50548
Alignment:
Q  9 ttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtg-cccgggggcaccggtta 107  Q
    ||||||| ||||||||||||||||| | ||||||||  |||||||||||||||| |||||||||||||| | |||||||||| ||||| |||||||||||    
T  50656 ttttgactttattataaattaattatacaatttcaaaacattaactactatataatttcctttttcatatctttaaccagtgccccggaggcaccggtta 50557  T
Q  108 gcatttccc 116  Q
     ||||||||    
T  50556 acatttccc 50548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19655 - 19771
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggca 100  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||||||| || |||||| |||| |||||||||  |||||||  ||||| ||||||    
T  19655 gaaactgtttttgactttattataaattcattacacaatttcaatgcattaattattatataatttcttttttcatatgcttaacccatgccctggggca 19754  T
Q  101 ccggttagcatttccct 117  Q
    |||||||  ||||||||    
T  19755 ccggttatgatttccct 19771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 17542 - 17658
Alignment:
Q  2 aaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccgggggcac 101  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||||| |||||||||| ||| |||||||||| || ||| |||||||  ||| ||     
T  17542 aaactgtttttgactttattataaattaatt-cacaatttcaatgcattagctactatataattttctttttcatatccgtaaacagtgcctcgggaca- 17639  T
Q  102 cggttagcatttccctttt 120  Q
    |||||||||||||||||||    
T  17640 cggttagcatttccctttt 17658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41035 - 40959
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcata 77  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  41035 gaaactgtttttgacttcattataaattaattacataatttcaatgcattaactattatataatttcatttttcata 40959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 25829 - 25719
Alignment:
Q  6 tgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagt-gcccgggggcaccgg 104  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||| |||||||||  ||||||||||||| |||||||| ||  ||| | |||||| |    
T  25829 tgtttttgactttattataaattaattacacaatttcaatacattaattactatata-attcctttttcatatccttaacccgtatcccagaggcaccag 25731  T
Q  105 ttagcatttccc 116  Q
    ||||||||||||    
T  25730 ttagcatttccc 25719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10826 - 10771
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaactac 56  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  10826 gaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac 10771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 233969 - 233918
Alignment:
Q  1 gaaactgtttttgacattattataaattaattacataatttcaatgcattaa 52  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||| |||||    
T  233969 gaaactgcttttgactttattataaattaattacacaatttcaatgaattaa 233918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 5136 - 5094
Alignment:
Q  20 ttataaattaattacataatttcaatgcattaactactatata 62  Q
    |||||||||||||||| |||||||||  |||||||||||||||    
T  5136 ttataaattaattacacaatttcaataaattaactactatata 5094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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