View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0639_high_6 (Length: 226)
Name: NF0639_high_6
Description: NF0639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0639_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 8087545 - 8087672
Alignment:
| Q |
10 |
attattctcctaaaatgaaatacacaataaggatttatttactatatgtcatatttgtagtctaacgaacaaggtatacaataaaagtgattgaatataa |
109 |
Q |
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| T |
8087545 |
attattctcctaaaatgaaatacacaataaggatttatttactatatgtcatgtttgtggtctaatgaacaaggtatacaataaaagtgattgaatataa |
8087644 |
T |
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| Q |
110 |
tcatatgtgttagtggcgtgtccgtgtt |
137 |
Q |
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| T |
8087645 |
tcatatgtgttagtggcgtgtcggtgtt |
8087672 |
T |
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