View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0641_low_12 (Length: 484)
Name: NF0641_low_12
Description: NF0641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0641_low_12 |
 | |
|
| [»] chr6 (1 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 396; Significance: 0; HSPs: 25)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 29 - 440
Target Start/End: Complemental strand, 30437224 - 30436813
Alignment:
| Q |
29 |
acaagacctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaagtttcgc |
128 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30437224 |
acaagacctcaaagatgctgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaagtttcgc |
30437125 |
T |
|
| Q |
129 |
cataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgggtgtaactcttaggg |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30437124 |
cataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgggtgtaactcttaggg |
30437025 |
T |
|
| Q |
229 |
aaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaagaaaggattgtccagtt |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
30437024 |
aaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaagaaaagattgtccagtt |
30436925 |
T |
|
| Q |
329 |
tcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgttcaattgatctacaat |
428 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
30436924 |
tcttcttacccttgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtattggaaaaacaactcttgttcaattgatctacaat |
30436825 |
T |
|
| Q |
429 |
gatgttagggtg |
440 |
Q |
| |
|
|||||||||||| |
|
|
| T |
30436824 |
gatgttagggtg |
30436813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 29 - 440
Target Start/End: Complemental strand, 30484827 - 30484401
Alignment:
| Q |
29 |
acaagacctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaa------- |
121 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||| ||| || ||||| || |
|
|
| T |
30484827 |
acaagacctcaaagatgctgtttatgtgctcgatgatatccttgatgagtactcgatcgagtcttgtcgactcagaggatttacctctttcaaaccaaag |
30484728 |
T |
|
| Q |
122 |
--------gtttcgccataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgg |
213 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||| ||||||| ||| |||||||||| | ||||||||||||||||| || |||| |
|
|
| T |
30484727 |
aacatcatgtttcgccatgagattggtaacaggttgaaagagattacaaggaggttagatgatattgctgaaagaaagaacaagttttctctacagacgg |
30484628 |
T |
|
| Q |
214 |
gtgtaactcttagggaaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaaga |
313 |
Q |
| |
|
||| ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
30484627 |
gtgaaactcttagggtaatcccagatcaagtagctgaagggcgccaaaccagctccacccctcttgaatcaaaagcattaggaagagacgatgataaaga |
30484528 |
T |
|
| Q |
314 |
aaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgtt |
413 |
Q |
| |
|
|| ||||||| |||||||||| ||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
30484527 |
aaagattgtcgagtttcttctcacctatgcgaaggactctaacttcatttctgtctatcccattgttggtttaggtggtattggaaaaacaactcttgtt |
30484428 |
T |
|
| Q |
414 |
caattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
30484427 |
caattgatctacaatgatgttagggtg |
30484401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 29 - 440
Target Start/End: Original strand, 30712108 - 30712534
Alignment:
| Q |
29 |
acaagacctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaa------- |
121 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||| |||||||||| ||| || ||||| || |
|
|
| T |
30712108 |
acaagacctcaaagatgctgtttatgtgctcgatgatatccttgatgagtactcgatcgagtcttttcgactgagaggatttacctctttcaaactaaag |
30712207 |
T |
|
| Q |
122 |
--------gtttcgccataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgg |
213 |
Q |
| |
|
|||||||||| |||| ||||||||||| |||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||| || | || |
|
|
| T |
30712208 |
aacatcatgtttcgccatgagattggtaacaggttcaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgg |
30712307 |
T |
|
| Q |
214 |
gtgtaactcttagggaaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaaga |
313 |
Q |
| |
|
||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | | ||||||||| |||||||||| |
|
|
| T |
30712308 |
gtggaactcttagggaaatcccagatcaagtagctgaagggcgccaaaccagctccacccctcttgaatcaaaagcgctgggaagagacaatgataaaga |
30712407 |
T |
|
| Q |
314 |
aaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgtt |
413 |
Q |
| |
|
|| ||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
30712408 |
aaagattgtcgagtttcttctcacccatgcgaaggactctgacttcatttctgtctatcccattgttggtttaggtggtattggaaaaacaactcttgtt |
30712507 |
T |
|
| Q |
414 |
caattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
30712508 |
caattgatctacaatgatgttagggtg |
30712534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 29 - 440
Target Start/End: Original strand, 30337205 - 30337631
Alignment:
| Q |
29 |
acaagacctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaa------- |
121 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||| ||||||||||| ||| || ||||| || |
|
|
| T |
30337205 |
acaagacctcaaagatgctgtttatgtgctcgatgatatccttgatgagtactcgatcgagtcttgtcgactgagaggatttacctctttcaaaccaaag |
30337304 |
T |
|
| Q |
122 |
--------gtttcgccataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgg |
213 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| || | || |
|
|
| T |
30337305 |
aacatcaagtttcgccatgagatcggtaacaggttgaaagagattacaaggaggttagataatattgctgaacgtaagaacaagttttctctacagatgg |
30337404 |
T |
|
| Q |
214 |
gtgtaactcttagggaaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaaga |
313 |
Q |
| |
|
||| |||||||||||||| ||||||||||| |||||||||||||||||| |||||| | |||| |||||||||| ||| |||| | ||||||||| |
|
|
| T |
30337405 |
gtggaactcttagggaaatcccagatcaagtagctgaagggcgccaaaccggctccattattgctgaaccaaaagtgtttggacgagaagttgataaaga |
30337504 |
T |
|
| Q |
314 |
aaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgtt |
413 |
Q |
| |
|
|| |||||| |||||||||| |||| ||||||||||||||||| |||| ||||||||| | ||||||||||||||| | |||||||||||||||||| |
|
|
| T |
30337505 |
aaagattgttgagtttcttctcacccaagcgaaggactctgacttcctttccgtctatcccatagttggtttaggtggtgttggaaaaacaactcttgtt |
30337604 |
T |
|
| Q |
414 |
caattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
30337605 |
caattggtctacaatgatgttagggtg |
30337631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 29 - 440
Target Start/End: Complemental strand, 30061798 - 30061372
Alignment:
| Q |
29 |
acaagacctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaa------- |
121 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||| || ||||| || |
|
|
| T |
30061798 |
acaagacctcaaagatggtgtttatgtgctcgatgatatccttgatgagtactcgatcaagtcttgtcgactgagaggatttacctctttcaaaccaaag |
30061699 |
T |
|
| Q |
122 |
--------gtttcgccataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgg |
213 |
Q |
| |
|
|||||||||| |||| ||||||||||| |||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||| || | || |
|
|
| T |
30061698 |
aacatcatgtttcgccatgagattggtaacaggttcaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgg |
30061599 |
T |
|
| Q |
214 |
gtgtaactcttagggaaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaaga |
313 |
Q |
| |
|
||| ||||||||||||| ||||||||||| |||||||||||||||||| |||||| | |||| |||||||||| ||| |||| | ||||||||| |
|
|
| T |
30061598 |
gtggcactcttagggaaatcccagatcaagtagctgaagggcgccaaaccggctccattattgctgaaccaaaagtgtttggacgagaagttgataaaga |
30061499 |
T |
|
| Q |
314 |
aaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgtt |
413 |
Q |
| |
|
|| |||||| |||||||||| |||| || | |||||||||||| |||| ||||||||| | ||||||||||||||| | |||||||||||||||||| |
|
|
| T |
30061498 |
aaagattgttgagtttcttctcacccaagcaagggactctgacttcctttccgtctatcccatagttggtttaggtggtgttggaaaaacaactcttgtt |
30061399 |
T |
|
| Q |
414 |
caattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
30061398 |
caattggtctacaatgatgttagggtg |
30061372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 133 - 440
Target Start/End: Original strand, 30676087 - 30676394
Alignment:
| Q |
133 |
agatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgggtgtaactcttagggaaag |
232 |
Q |
| |
|
||||||| |||||||| |||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||| || | ||||| |||||||||||||| |
|
|
| T |
30676087 |
agatcggcaacaggttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgggtggaactcttagggaaat |
30676186 |
T |
|
| Q |
233 |
cccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaagaaaggattgtccagtttctt |
332 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||| | | |||| |||||||||| ||| |||| | |||| |||||| ||||||| |||||||| |
|
|
| T |
30676187 |
cccagatcaagtagctgaagggcgccaaaccggctcaattattgctgaatcaaaagtgtttggacgagaagttgatcaagaaaagattgtcgagtttctt |
30676286 |
T |
|
| Q |
333 |
cttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgttcaattgatctacaatgatg |
432 |
Q |
| |
|
|| |||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30676287 |
ctcacccatgcgaaggactctgacttcatttctgtctatcccatttttggtttaggtggtattggaaaaacaactcttgttcaattgatcttcaatgatg |
30676386 |
T |
|
| Q |
433 |
ttagggtg |
440 |
Q |
| |
|
|||||||| |
|
|
| T |
30676387 |
ttagggtg |
30676394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 29 - 440
Target Start/End: Complemental strand, 30751072 - 30750646
Alignment:
| Q |
29 |
acaagacctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaa------- |
121 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| |||||| ||||||||||| || || ||||| || |
|
|
| T |
30751072 |
acaagacctcaaagatgctgtttatgtgctcgatgatatccttgatgagtactcgattaagtcttgtcgactgagaggatgtacctctttcaaaccaaag |
30750973 |
T |
|
| Q |
122 |
--------gtttcgccataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgg |
213 |
Q |
| |
|
|||||||||| |||| ||||||||||| |||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||| || | || |
|
|
| T |
30750972 |
aacatcatgtttcgccatgagattggtaacaggttaaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgg |
30750873 |
T |
|
| Q |
214 |
gtgtaactcttagggaaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaaga |
313 |
Q |
| |
|
||| |||||||||||||| ||||||||||| |||||||||||||||||| |||||| | |||| |||||||||| ||| |||| | ||||||||| |
|
|
| T |
30750872 |
gtggaactcttagggaaatcccagatcaagtagctgaagggcgccaaaccggctccattattgctgaaccaaaagtgtttggacgagaagttgataaaga |
30750773 |
T |
|
| Q |
314 |
aaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgtt |
413 |
Q |
| |
|
|| ||||| |||||||||| |||| || | |||||||||||| |||| ||||||||| | ||||||||||||||| | |||||||||||||||||| |
|
|
| T |
30750772 |
aaagattgctgagtttcttctcacccaagcaagggactctgacttcctttccgtctatcccatagttggtttaggtggtgttggaaaaacaactcttgtt |
30750673 |
T |
|
| Q |
414 |
caattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
30750672 |
caattggtctacaatgatgttagggtg |
30750646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 122 - 440
Target Start/End: Complemental strand, 29873492 - 29873174
Alignment:
| Q |
122 |
gtttcgccataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgggtgtaact |
221 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||| ||| | |||| | | |
|
|
| T |
29873492 |
gtttcgccttgagatcggcaacaggttgaaagagattacaaggagattggatgatattgctgatagtaagaacaagttttttctacgggagggtactatt |
29873393 |
T |
|
| Q |
222 |
cttagggaaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaagaaaggattg |
321 |
Q |
| |
|
||| ||||||| || || ||| |||||| |||| ||||||||||||| | ||||| ||||||| || ||| |||| ||||||||||||| ||||| |
|
|
| T |
29873392 |
gttaaggaaagctcaaatgaagtagctgaatggcgtcaaaccagctccattattgttgaaccaaaagtatttggacgagaagatgataaagaaaagattg |
29873293 |
T |
|
| Q |
322 |
tccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgttcaattgat |
421 |
Q |
| |
|
| |||||||||| |||| |||| |||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||| | |
|
|
| T |
29873292 |
ttgagtttcttctcacccaagcgagggactctgacttcctttccgtctatcccattgttggtttaggtggtattggaaaaacaactctcgttcaattggt |
29873193 |
T |
|
| Q |
422 |
ctacaatgatgttagggtg |
440 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
29873192 |
ctacaatgatgttagggtg |
29873174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 36 - 435
Target Start/End: Original strand, 30241080 - 30241482
Alignment:
| Q |
36 |
ctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaagtttcgccataaga |
135 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| || ||| | |||||||||||| ||| |
|
|
| T |
30241080 |
ctcaaagatgttgtttatgtgctcgatgatatccttgatgagtgctcgatcaagtctagtcgactgagaggattaacctctctcaagtttcgccatgaga |
30241179 |
T |
|
| Q |
136 |
tcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacggg---tgtaactcttagggaaag |
232 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||| ||||||||| | | ||| ||||||| ||| || || || |||| || ||||||| |
|
|
| T |
30241180 |
tcggtaacaggttggaagagattaacgggaggttggatgatattgctgataggaggaagaagttttttctgcaggaaggtactggaactgttcgggaaag |
30241279 |
T |
|
| Q |
233 |
cccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaagaaaggattgtccagtttctt |
332 |
Q |
| |
|
|||| || | | |||||| |||| ||||||||| | | | |||| |||||||||| ||| |||| || |||||| | | |||| ||||||||||| |
|
|
| T |
30241280 |
cccaaatgacgtagctgaatggcgtcaaaccagcgctattattactgaaccaaaagtgtttggacgagaagacgataaaaagaagattatccagtttctt |
30241379 |
T |
|
| Q |
333 |
cttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgttcaattgatctacaatgatg |
432 |
Q |
| |
|
|| |||| || |||||||| ||||| |||| ||||||||||| |||| ||||||||| | |||||||| |||||| |||||| | |||||||||||| |
|
|
| T |
30241380 |
ctcacccaagcaaaggactccgacttcctttccatctatcccgtttttgggttaggtggtcttggaaaaaccactcttcttcaatcggtctacaatgatg |
30241479 |
T |
|
| Q |
433 |
tta |
435 |
Q |
| |
|
||| |
|
|
| T |
30241480 |
tta |
30241482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 36 - 440
Target Start/End: Complemental strand, 29854730 - 29854311
Alignment:
| Q |
36 |
ctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaa-------------- |
121 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| ||| ||| ||| ||| || ||||| || |
|
|
| T |
29854730 |
ctcaaagatgctgtttatgtgctcgatgatatccttgatgagtgttcaatcaagtctggtcaacttagaggattaacctctttcaaaccaaagaacatca |
29854631 |
T |
|
| Q |
122 |
-gtttcgccataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgggtgtaac |
220 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||| ||| |||||| ||||||||| ||||||||||||||| ||| | |||| | |
|
|
| T |
29854630 |
tgtttcgccatgagatcggcaacaggttgaaagagattacaaggaaattggatgatattgctgatagtaagaacaagttttttctacgggagggtactat |
29854531 |
T |
|
| Q |
221 |
tcttagggaaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaagaaaggatt |
320 |
Q |
| |
|
| ||| ||||||| || || ||| |||||| |||| ||||||||||||| | |||| |||||||||| ||| |||| ||||||||||||| |||| |
|
|
| T |
29854530 |
tgttaaggaaagctcaaatgaagtagctgaatggcgtcaaaccagctccattattgctgaaccaaaagtgtttggacgagaagatgataaagaaaagatt |
29854431 |
T |
|
| Q |
321 |
gtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgttcaattga |
420 |
Q |
| |
|
|| |||||||||| |||| ||| |||||| ||||| |||| ||||||||| || |||||||||||||| | ||||||||||||||| |||||||| |
|
|
| T |
29854430 |
gttgagtttcttctcacccaaacgagggactcagacttcctttccgtctatcccatttttggtttaggtggtgttggaaaaacaactcttcttcaattgg |
29854331 |
T |
|
| Q |
421 |
tctacaatgatgttagggtg |
440 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
29854330 |
tctacaatgatgttagggtg |
29854311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 286 - 440
Target Start/End: Complemental strand, 30401228 - 30401074
Alignment:
| Q |
286 |
aagtgttaggaagagacgatgataaagaaaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggttt |
385 |
Q |
| |
|
||||||| ||| || | ||||||||||||| |||| | |||||||||| |||| ||||| |||||||||||| |||| ||||| ||| |||||||||| |
|
|
| T |
30401228 |
aagtgtttggacgaaaagatgataaagaaaagatttttgagtttcttctcacccatgcgagggactctgacttcctttccgtctaccccattgttggttt |
30401129 |
T |
|
| Q |
386 |
aggtggtatcggaaaaacaactcttgttcaattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
||||||||| || ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30401128 |
aggtggtattggtaaaacaactcttgttcaattggtctacaatgatgttagggtg |
30401074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 298 - 440
Target Start/End: Complemental strand, 30207664 - 30207522
Alignment:
| Q |
298 |
gagacgatgataaagaaaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcgg |
397 |
Q |
| |
|
|||| ||||||||||| | |||| || |||||||||| |||| |||| |||||| ||||| |||| ||||||||| ||||||||||||||||| | || |
|
|
| T |
30207664 |
gagaagatgataaagagaagattatcgagtttcttctcacccaagcgagggactccgacttcctttccgtctatcccattgttggtttaggtggtgttgg |
30207565 |
T |
|
| Q |
398 |
aaaaacaactcttgttcaattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
30207564 |
aaaaacaactcttgttcaattggtctacaatgatgctagggtg |
30207522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 440
Target Start/End: Original strand, 30330192 - 30330315
Alignment:
| Q |
317 |
gattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgttcaa |
416 |
Q |
| |
|
||||||| |||||||||| |||| |||| |||| ||||||| |||| |||||||| | ||||||||||| ||||| |||||||||||| |||||| | |
|
|
| T |
30330192 |
gattgtcaagtttcttctcacccaagcgagggacactgacttcctttccatctatcccatagttggtttaggaggtattggaaaaacaactattgttcga |
30330291 |
T |
|
| Q |
417 |
ttgatctacaatgatgttagggtg |
440 |
Q |
| |
|
|||||| || ||||| |||||||| |
|
|
| T |
30330292 |
ttgatccacgatgatattagggtg |
30330315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 30675968 - 30676031
Alignment:
| Q |
29 |
acaagacctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtct |
92 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||| |
|
|
| T |
30675968 |
acaagacctcaaagatgctgtttatgtgctcgatgatatccttgatgagtattcaatcaagtct |
30676031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 29873593 - 29873525
Alignment:
| Q |
36 |
ctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgaga |
104 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| ||| ||| ||| |
|
|
| T |
29873593 |
ctcaaagatgttgtttatgtgctcgatgatatccttgatgagtgctcgatcaagtctggtcaacttaga |
29873525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 30401496 - 30401440
Alignment:
| Q |
36 |
ctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtct |
92 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
30401496 |
ctcaaagatgctgtttatgtgctcgatgatatccttgatgagtgttcgatcgagtct |
30401440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 17417620 - 17417699
Alignment:
| Q |
361 |
tttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgttcaattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
|||| ||||||||| | ||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||||||| |
|
|
| T |
17417620 |
tttcagtctatcccatagttgggttaggtggtattggtaaaacaactctagctcaattggtctacaatgatgttagggtg |
17417699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 325 - 432
Target Start/End: Complemental strand, 17984013 - 17983906
Alignment:
| Q |
325 |
agtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgttcaattgatcta |
424 |
Q |
| |
|
|||||||||| |||| |||| | ||||||||| |||| ||||||||| ||||||| ||||||||| | |||||||||||||||| ||||||| |||| |
|
|
| T |
17984013 |
agtttcttctcacccaagcgaggttctctgacttcctttccgtctatcccattgttgggttaggtggtgttggaaaaacaactcttgctcaattggtcta |
17983914 |
T |
|
| Q |
425 |
caatgatg |
432 |
Q |
| |
|
||| |||| |
|
|
| T |
17983913 |
caacgatg |
17983906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 30207941 - 30207885
Alignment:
| Q |
36 |
ctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtct |
92 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||| |
|
|
| T |
30207941 |
ctcaaagatgctgtttatgtgctcgatgatatccttgatgagtgctcgatcgagtct |
30207885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 418
Target Start/End: Original strand, 30520589 - 30520709
Alignment:
| Q |
298 |
gagacgatgataaagaaaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcgg |
397 |
Q |
| |
|
|||| ||||||||||| | ||||||| |||||||||| |||| || |||| ||||||| | |||| ||||||| ||||||| ||||||||||| || |
|
|
| T |
30520589 |
gagaagatgataaagagaagattgtcgagtttcttctcacccaagcaaagggctctgacctcctttccatctatccaattgttggcttaggtggtattgg |
30520688 |
T |
|
| Q |
398 |
aaaaacaactcttgttcaatt |
418 |
Q |
| |
|
||||||||||||| |||||| |
|
|
| T |
30520689 |
gaaaacaactcttgctcaatt |
30520709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 418
Target Start/End: Original strand, 30560929 - 30561049
Alignment:
| Q |
298 |
gagacgatgataaagaaaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcgg |
397 |
Q |
| |
|
|||| ||||||||||| | ||||||| |||||||||| |||| || |||| ||||||| | |||| ||||||| ||||||| ||||||||||| || |
|
|
| T |
30560929 |
gagaagatgataaagagaagattgtcgagtttcttctcacccaagcaaagggctctgacctcctttccatctatccaattgttggcttaggtggtattgg |
30561028 |
T |
|
| Q |
398 |
aaaaacaactcttgttcaatt |
418 |
Q |
| |
|
||||||||||||| |||||| |
|
|
| T |
30561029 |
gaaaacaactcttgctcaatt |
30561049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 30401395 - 30401317
Alignment:
| Q |
122 |
gtttcgccataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttt |
200 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||||||||||| | || |||||| ||||||||| ||||||||| ||| |
|
|
| T |
30401395 |
gtttcgccgtcagatcggcaacaggttgaaagagattacaagaagattggatgatattgctgatattaagaacaaattt |
30401317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 17417355 - 17417416
Alignment:
| Q |
36 |
ctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcg |
97 |
Q |
| |
|
|||||||||| |||||||||||| ||||| || ||||||||||| || ||| ||||| |||| |
|
|
| T |
17417355 |
ctcaaagatgttgtttatgtgctagatgatattcttgatgagtgctcaatcgagtctggtcg |
17417416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 30207815 - 30207762
Alignment:
| Q |
147 |
ttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttt |
200 |
Q |
| |
|
||||||||||||||| ||||||| ||| |||||||||| |||| ||||||||| |
|
|
| T |
30207815 |
ttgaaagagattacaaggaggttagatgatattgctgaaagtaaaaacaagttt |
30207762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 30329529 - 30329590
Alignment:
| Q |
37 |
tcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcga |
98 |
Q |
| |
|
||||||||||| | |||||||| ||||| |||||||||||||| | |||| ||||| ||||| |
|
|
| T |
30329529 |
tcaaagatgatatatatgtgcttgatgatatccttgatgagtgcttgatcgagtctggtcga |
30329590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 29 - 440
Target Start/End: Complemental strand, 26708743 - 26708332
Alignment:
| Q |
29 |
acaagacctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaagtttcgc |
128 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
26708743 |
acaagacctcaaagatgttgtatatgtgctcgatgacatccttgatgaatgctcgatcaagtctagtcgactgaaaaaattcacctctttaaagtttcgc |
26708644 |
T |
|
| Q |
129 |
cataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgggtgtaactcttaggg |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
26708643 |
cataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctacagacgggtggaactcttaggg |
26708544 |
T |
|
| Q |
229 |
aaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaagaaaggattgtccagtt |
328 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| |||| |
|
|
| T |
26708543 |
aaagcccatatcaagtagctgaagggcgccaaaccagctccacccctcttgaaacaaaagcgttgggaagagacgatgataaagaaaagattgtcgagtt |
26708444 |
T |
|
| Q |
329 |
tcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgttcaattgatctacaat |
428 |
Q |
| |
|
|||||| |||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
26708443 |
tcttctcacccatgcgaaggactctgacttcatttctgtctatcccattgttggcttaggtggtattggaaaaacaactcttgttcagttgatctacaac |
26708344 |
T |
|
| Q |
429 |
gatgttagggtg |
440 |
Q |
| |
|
|||||||||||| |
|
|
| T |
26708343 |
gatgttagggtg |
26708332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 29 - 432
Target Start/End: Original strand, 20295262 - 20295680
Alignment:
| Q |
29 |
acaagacctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgactgagaaaattcacatctttaaa------- |
121 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||| ||||||||||||| |||||| ||||| ||||||||||| ||| | ||||| || |
|
|
| T |
20295262 |
acaagacctcaaagatgctgtttatgtgctcggtgatatccttgatgagtactcgatcgagtctggtcgactgagaggatttaactctttcaaaccaatg |
20295361 |
T |
|
| Q |
122 |
--------gtttcgccataagatcggtaacaggttgaaagagattacagggaggttggatcgtattgctgaacgtaagaacaagttttctctccatacgg |
213 |
Q |
| |
|
|||||||||| ||||||||| |||||| |||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||| || | || |
|
|
| T |
20295362 |
aacatcgcgtttcgccatgagatcggtagcaggtttaaagagattacaaggaggttagatgatattgctgaaagtaagaacaagttttctctacagatgg |
20295461 |
T |
|
| Q |
214 |
gtgtaactcttagggaaagcccagatcaagctgctgaagggcgccaaaccagctccacccctcttgaaacaaaagtgttaggaagagacgatgataaaga |
313 |
Q |
| |
|
||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| | |
|
|
| T |
20295462 |
gtggaactcttagggaaatcccagatcaagtagctgaagggcgccaaaccagctccacccctcttgaatcaaaagcattgggaagagacgatgataaaaa |
20295561 |
T |
|
| Q |
314 |
aaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttaggtggtatcggaaaaacaactcttgtt |
413 |
Q |
| |
|
|| ||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
20295562 |
aaagattgtcgagtttcttctcacccatgcgaaggactctgacttcatttctgtctatcccattgttggtttaggtggtattggaaaaacaactcttgtt |
20295661 |
T |
|
| Q |
414 |
caattgatctacaatgatg |
432 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
20295662 |
caattagtctacaatgatg |
20295680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 376 - 436
Target Start/End: Complemental strand, 52353023 - 52352963
Alignment:
| Q |
376 |
ttgttggtttaggtggtatcggaaaaacaactcttgttcaattgatctacaatgatgttag |
436 |
Q |
| |
|
||||||||||||||||| | || ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
52353023 |
ttgttggtttaggtggtgttggtaaaacaactcttgttcaattggtctacaatgatgttag |
52352963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 52353380 - 52353316
Alignment:
| Q |
36 |
ctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgact |
100 |
Q |
| |
|
|||||||||| |||||| || |||||||| ||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
52353380 |
ctcaaagatgctgtttacgttctcgatgatatccttgatgaatgttcgatcaaatctagtcgact |
52353316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 13617689 - 13617647
Alignment:
| Q |
350 |
ctctgactttatttctgtctatcccgttgttggtttaggtggt |
392 |
Q |
| |
|
|||||||||| |||||| ||||||| ||||||||||||||||| |
|
|
| T |
13617689 |
ctctgactttctttctgactatcccattgttggtttaggtggt |
13617647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 283 - 440
Target Start/End: Original strand, 25292896 - 25293053
Alignment:
| Q |
283 |
caaaagtgttaggaagagacgatgataaagaaaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttgg |
382 |
Q |
| |
|
||||||| || ||| |||| ||||||||||| | || |||| ||||||||||||||| || | |||||||||||| |||| ||| ||||| ||||||| |
|
|
| T |
25292896 |
caaaagtatttggacgagaagatgataaagagaagactgtcgagtttcttcttacccaagcaagggactctgacttcctttccgtccatcccattgttgg |
25292995 |
T |
|
| Q |
383 |
tttaggtggtatcggaaaaacaactcttgttcaattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
25292996 |
tttaggtggtgttggaaaaacaactcttgttcaattggtctacaatgatgttagggtg |
25293053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 25292634 - 25292698
Alignment:
| Q |
36 |
ctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgact |
100 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||||||||||||| | |||||| ||||||||||| |
|
|
| T |
25292634 |
ctcaaagatgttgtatatgtgctcgatgatatccttgatgagtgattgatcaaatctagtcgact |
25292698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 66; Significance: 6e-29; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 283 - 440
Target Start/End: Original strand, 7580668 - 7580825
Alignment:
| Q |
283 |
caaaagtgttaggaagagacgatgataaagaaaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttgg |
382 |
Q |
| |
|
|||| ||||| ||| |||| ||||||||||| |||||||| |||||||||| |||| |||| |||||| ||||| |||| |||||||| ||||||| |
|
|
| T |
7580668 |
caaaggtgtttggacgagaagatgataaagagaggattgttgagtttcttctcacccaagcgagggactcggacttcctttccgtctatccaattgttgg |
7580767 |
T |
|
| Q |
383 |
tttaggtggtatcggaaaaacaactcttgttcaattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||||| ||||||| |||| ||||||| |
|
|
| T |
7580768 |
tttaggtggtgttggaaaaacaactcttgctcaattggtctacaacgatgatagggtg |
7580825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 289 - 440
Target Start/End: Complemental strand, 7100572 - 7100421
Alignment:
| Q |
289 |
tgttaggaagagacgatgataaagaaaggattgtccagtttcttcttacccctgcgaaggactctgactttatttctgtctatcccgttgttggtttagg |
388 |
Q |
| |
|
|||| ||| |||| ||||||||||| | |||||| |||||||||| |||| || |||||||||||||| | || ||||||||| |||| |||||||| |
|
|
| T |
7100572 |
tgtttggacgagaagatgataaagagaagattgttgagtttcttctcacccaagcaaaggactctgacttcctatccgtctatcccattgtcggtttagg |
7100473 |
T |
|
| Q |
389 |
tggtatcggaaaaacaactcttgttcaattgatctacaatgatgttagggtg |
440 |
Q |
| |
|
|||| | ||||||||||||||| ||||||| | |||||||||| ||||||| |
|
|
| T |
7100472 |
tggtgttggaaaaacaactctttctcaattggtttacaatgatgatagggtg |
7100421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 7580415 - 7580479
Alignment:
| Q |
36 |
ctcaaagatgatgtttatgtgctcgatgacatccttgatgagtgttcgatcaagtctagtcgact |
100 |
Q |
| |
|
|||||||||| || |||||||| ||||| |||||||||||||||| ||||| || |||||||| |
|
|
| T |
7580415 |
ctcaaagatgcggtgtatgtgcttgatgatatccttgatgagtgtttaatcaaatccagtcgact |
7580479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 437 - 484
Target Start/End: Complemental strand, 7547294 - 7547247
Alignment:
| Q |
437 |
ggtgtgtgtagaagaagagggagcagctccccttctcaacattttttc |
484 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
7547294 |
ggtgtgtgtagaagaagagggagcaactccccttctctacattttttc |
7547247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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