View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0641_low_50 (Length: 301)

Name: NF0641_low_50
Description: NF0641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0641_low_50
NF0641_low_50
[»] chr4 (47 HSPs)
chr4 (1-277)||(31918629-31918905)
chr4 (9-277)||(6382343-6382611)
chr4 (9-277)||(5902685-5902951)
chr4 (1-276)||(21423611-21423884)
chr4 (30-277)||(44317312-44317559)
chr4 (1-277)||(7608720-7608994)
chr4 (1-277)||(47550424-47550698)
chr4 (1-240)||(11027822-11028060)
chr4 (1-277)||(55826694-55826968)
chr4 (1-277)||(11122940-11123212)
chr4 (83-240)||(48459312-48459469)
chr4 (9-240)||(4766419-4766652)
chr4 (3-240)||(42774512-42774749)
chr4 (53-240)||(39046755-39046940)
chr4 (116-272)||(43893092-43893247)
chr4 (10-277)||(32585247-32585513)
chr4 (83-237)||(47239495-47239649)
chr4 (83-240)||(31752287-31752444)
chr4 (30-215)||(15987372-15987556)
chr4 (9-237)||(19534213-19534440)
chr4 (1-237)||(37348873-37349108)
chr4 (32-201)||(53906427-53906596)
chr4 (9-241)||(1724416-1724647)
chr4 (91-240)||(42299630-42299779)
chr4 (15-240)||(425586-425811)
chr4 (32-238)||(28695251-28695456)
chr4 (30-277)||(6482106-6482352)
chr4 (9-240)||(37107170-37107399)
chr4 (1-237)||(7985231-7985468)
chr4 (29-240)||(12825568-12825777)
chr4 (3-228)||(9230034-9230262)
chr4 (92-237)||(32596294-32596438)
chr4 (9-237)||(39188273-39188499)
chr4 (101-241)||(26564681-26564820)
chr4 (8-74)||(43893005-43893071)
chr4 (9-221)||(29755456-29755668)
chr4 (87-169)||(13015550-13015632)
chr4 (157-237)||(13015361-13015446)
chr4 (9-221)||(13770581-13770792)
chr4 (152-226)||(39375180-39375253)
chr4 (154-230)||(29527693-29527768)
chr4 (16-70)||(6268300-6268354)
chr4 (25-68)||(52602873-52602916)
chr4 (10-68)||(24475146-24475204)
chr4 (1-42)||(16216978-16217019)
chr4 (1-68)||(568144-568212)
chr4 (1-68)||(11172695-11172763)
[»] chr2 (32 HSPs)
chr2 (1-277)||(30846689-30846965)
chr2 (1-277)||(36128176-36128452)
chr2 (1-277)||(24414202-24414476)
chr2 (1-277)||(13830480-13830755)
chr2 (9-277)||(42798058-42798325)
chr2 (1-277)||(10208500-10208774)
chr2 (30-277)||(9632160-9632405)
chr2 (1-277)||(8916007-8916280)
chr2 (4-240)||(37999232-37999466)
chr2 (31-240)||(10920420-10920628)
chr2 (30-237)||(18106199-18106405)
chr2 (15-240)||(13705467-13705692)
chr2 (1-240)||(45256568-45256806)
chr2 (1-222)||(37472853-37473074)
chr2 (83-240)||(37106525-37106681)
chr2 (1-237)||(7314757-7314994)
chr2 (83-240)||(12193933-12194090)
chr2 (85-236)||(45115386-45115537)
chr2 (30-272)||(44746184-44746427)
chr2 (1-237)||(6027998-6028233)
chr2 (3-190)||(16105370-16105551)
chr2 (101-241)||(31942291-31942430)
chr2 (100-240)||(14540629-14540764)
chr2 (101-241)||(16226832-16226971)
chr2 (3-240)||(19104947-19105182)
chr2 (30-118)||(11008981-11009068)
chr2 (1-59)||(45115325-45115383)
chr2 (31-70)||(31942459-31942499)
chr2 (11-69)||(12286018-12286076)
chr2 (9-59)||(37319694-37319744)
chr2 (33-74)||(14540251-14540294)
chr2 (150-230)||(38342657-38342736)
[»] chr7 (57 HSPs)
chr7 (1-277)||(35074217-35074493)
chr7 (1-277)||(18125298-18125572)
chr7 (1-277)||(16865918-16866192)
chr7 (1-237)||(25905377-25905612)
chr7 (1-240)||(45885871-45886109)
chr7 (1-237)||(7779758-7779992)
chr7 (30-277)||(17851632-17851877)
chr7 (1-240)||(30650379-30650618)
chr7 (4-237)||(44794136-44794367)
chr7 (16-236)||(37182036-37182258)
chr7 (1-240)||(41741555-41741793)
chr7 (88-275)||(24753011-24753196)
chr7 (1-237)||(39316742-39316979)
chr7 (83-240)||(45708968-45709125)
chr7 (1-237)||(44986008-44986242)
chr7 (19-240)||(45379871-45380093)
chr7 (116-277)||(21702522-21702682)
chr7 (83-237)||(38139902-38140056)
chr7 (1-222)||(43507181-43507402)
chr7 (1-240)||(37579012-37579249)
chr7 (87-240)||(44734463-44734616)
chr7 (101-240)||(37196104-37196243)
chr7 (29-237)||(25980026-25980234)
chr7 (1-185)||(38152649-38152834)
chr7 (108-240)||(17885320-17885452)
chr7 (1-201)||(10072237-10072438)
chr7 (1-237)||(18825981-18826214)
chr7 (83-193)||(3227696-3227806)
chr7 (4-277)||(12980126-12980400)
chr7 (1-240)||(5376835-5377072)
chr7 (156-237)||(44658558-44658639)
chr7 (1-237)||(26622701-26622935)
chr7 (1-240)||(16078762-16079000)
chr7 (119-240)||(39456119-39456240)
chr7 (87-237)||(41103487-41103640)
chr7 (158-240)||(16811635-16811717)
chr7 (100-237)||(3920386-3920522)
chr7 (4-237)||(23328362-23328593)
chr7 (110-277)||(2630643-2630809)
chr7 (9-240)||(27850432-27850660)
chr7 (1-74)||(21702428-21702501)
chr7 (125-230)||(46127296-46127400)
chr7 (1-193)||(26004673-26004865)
chr7 (117-240)||(24425246-24425367)
chr7 (154-240)||(26004578-26004663)
chr7 (1-70)||(46127437-46127507)
chr7 (184-237)||(3227055-3227108)
chr7 (1-70)||(24752782-24752850)
chr7 (10-68)||(2632245-2632304)
chr7 (1-123)||(17884981-17885103)
chr7 (1-70)||(17885195-17885265)
chr7 (1-57)||(41103392-41103449)
chr7 (29-70)||(3920315-3920357)
chr7 (154-240)||(25783013-25783098)
chr7 (1-68)||(43218009-43218078)
chr7 (9-58)||(23475610-23475659)
chr7 (201-237)||(38152835-38152871)
[»] chr1 (46 HSPs)
chr1 (1-274)||(20774376-20774649)
chr1 (1-277)||(28297677-28297953)
chr1 (1-277)||(34610818-34611092)
chr1 (29-240)||(42439776-42439987)
chr1 (1-275)||(24710602-24710875)
chr1 (1-277)||(29936161-29936435)
chr1 (29-277)||(49250843-49251090)
chr1 (1-277)||(36187290-36187566)
chr1 (3-277)||(24236831-24237103)
chr1 (27-277)||(51421629-51421877)
chr1 (3-240)||(50426761-50426997)
chr1 (12-237)||(5180800-5181025)
chr1 (9-240)||(17134699-17134930)
chr1 (1-240)||(34060126-34060364)
chr1 (1-240)||(45866291-45866530)
chr1 (1-240)||(17092065-17092304)
chr1 (84-277)||(23966699-23966892)
chr1 (1-240)||(40087569-40087802)
chr1 (30-185)||(23493497-23493651)
chr1 (93-237)||(42707939-42708083)
chr1 (32-240)||(3628093-3628300)
chr1 (1-237)||(39616046-39616283)
chr1 (90-237)||(18354189-18354336)
chr1 (89-277)||(19572582-19572768)
chr1 (3-217)||(13020434-13020648)
chr1 (30-241)||(44615581-44615791)
chr1 (1-241)||(44792750-44792988)
chr1 (135-227)||(16408824-16408916)
chr1 (1-237)||(29871394-29871628)
chr1 (100-240)||(35936923-35937062)
chr1 (104-241)||(49741112-49741248)
chr1 (15-277)||(12494767-12495029)
chr1 (87-240)||(9982996-9983148)
chr1 (19-241)||(34673387-34673610)
chr1 (100-240)||(16433270-16433406)
chr1 (32-163)||(13390224-13390355)
chr1 (101-232)||(44632250-44632380)
chr1 (166-226)||(2514677-2514736)
chr1 (191-277)||(23490841-23490926)
chr1 (103-231)||(38733838-38733965)
chr1 (197-240)||(13390353-13390396)
chr1 (17-70)||(49742195-49742249)
chr1 (170-235)||(24159994-24160058)
chr1 (9-67)||(13692337-13692395)
chr1 (7-68)||(17516150-17516212)
chr1 (1-61)||(35937101-35937161)
[»] chr8 (34 HSPs)
chr8 (3-277)||(32302806-32303079)
chr8 (9-276)||(28977185-28977450)
chr8 (1-277)||(24927693-24927967)
chr8 (1-274)||(2075907-2076180)
chr8 (9-275)||(4230791-4231055)
chr8 (5-240)||(24870130-24870363)
chr8 (3-193)||(31325011-31325199)
chr8 (32-240)||(29108928-29109137)
chr8 (1-240)||(17220461-17220699)
chr8 (83-237)||(45235890-45236044)
chr8 (26-237)||(27932180-27932392)
chr8 (83-234)||(39445680-39445830)
chr8 (1-240)||(1063253-1063489)
chr8 (1-240)||(11255114-11255349)
chr8 (9-241)||(1012369-1012600)
chr8 (1-241)||(17469000-17469238)
chr8 (1-240)||(34139189-34139429)
chr8 (88-201)||(40248492-40248605)
chr8 (1-133)||(34301367-34301498)
chr8 (137-237)||(34776945-34777045)
chr8 (9-145)||(34776214-34776349)
chr8 (1-241)||(24568683-24568921)
chr8 (100-237)||(34021321-34021456)
chr8 (100-221)||(35215347-35215467)
chr8 (101-241)||(43113731-43113870)
chr8 (1-237)||(36132026-36132259)
chr8 (101-237)||(20399435-20399571)
chr8 (101-235)||(29089554-29089685)
chr8 (10-68)||(8030869-8030928)
chr8 (1-48)||(20399380-20399427)
chr8 (26-70)||(5858768-5858812)
chr8 (10-74)||(35215229-35215293)
chr8 (138-237)||(14186205-14186299)
chr8 (1-59)||(15174158-15174217)
[»] chr3 (44 HSPs)
chr3 (10-277)||(44953505-44953770)
chr3 (1-241)||(23547077-23547316)
chr3 (1-277)||(44252485-44252765)
chr3 (1-240)||(17146256-17146494)
chr3 (1-277)||(29284079-29284354)
chr3 (1-277)||(44179071-44179344)
chr3 (1-277)||(49579808-49580082)
chr3 (3-282)||(49025428-49025704)
chr3 (29-240)||(52572381-52572591)
chr3 (31-277)||(44106862-44107107)
chr3 (30-276)||(39655344-39655589)
chr3 (1-240)||(43582321-43582560)
chr3 (1-240)||(52197896-52198137)
chr3 (1-277)||(7469848-7470122)
chr3 (30-277)||(39728444-39728689)
chr3 (1-240)||(29842051-29842290)
chr3 (1-237)||(44639019-44639253)
chr3 (83-277)||(44172452-44172644)
chr3 (95-240)||(10823799-10823944)
chr3 (1-237)||(20086753-20086988)
chr3 (9-237)||(22535950-22536180)
chr3 (4-237)||(23580574-23580806)
chr3 (1-277)||(34154160-34154432)
chr3 (89-240)||(6738500-6738651)
chr3 (1-237)||(34025703-34025933)
chr3 (83-240)||(48390923-48391079)
chr3 (3-232)||(48306650-48306878)
chr3 (1-240)||(4557411-4557649)
chr3 (29-240)||(19111508-19111716)
chr3 (9-240)||(53631653-53631886)
chr3 (1-233)||(31126908-31127139)
chr3 (4-240)||(54316890-54317126)
chr3 (1-240)||(830765-830991)
chr3 (104-241)||(4016149-4016285)
chr3 (87-240)||(30682651-30682803)
chr3 (31-240)||(42758144-42758356)
chr3 (163-240)||(23154170-23154246)
chr3 (100-218)||(34119501-34119618)
chr3 (100-241)||(41937107-41937247)
chr3 (30-70)||(1722732-1722772)
chr3 (1-68)||(2487515-2487583)
chr3 (31-116)||(23154243-23154327)
chr3 (154-235)||(14208298-14208377)
chr3 (1-44)||(23329905-23329948)
[»] chr6 (25 HSPs)
chr6 (1-277)||(3483993-3484267)
chr6 (1-277)||(32853588-32853862)
chr6 (1-240)||(2367070-2367308)
chr6 (1-237)||(10142627-10142861)
chr6 (30-273)||(27534457-27534698)
chr6 (1-237)||(10188182-10188418)
chr6 (4-237)||(24225447-24225677)
chr6 (30-277)||(5863453-5863698)
chr6 (30-277)||(12141159-12141403)
chr6 (5-240)||(12309329-12309554)
chr6 (9-237)||(12678203-12678431)
chr6 (140-277)||(27738654-27738790)
chr6 (1-221)||(14244992-14245210)
chr6 (1-239)||(14254704-14254939)
chr6 (100-277)||(14505929-14506104)
chr6 (101-240)||(14032400-14032538)
chr6 (9-189)||(32052808-32052988)
chr6 (9-220)||(14410959-14411171)
chr6 (119-240)||(24602962-24603082)
chr6 (29-241)||(30816029-30816240)
chr6 (111-201)||(32532417-32532507)
chr6 (100-237)||(7393996-7394132)
chr6 (1-240)||(11762190-11762427)
chr6 (170-240)||(32053000-32053070)
chr6 (7-68)||(18908621-18908683)
[»] chr5 (51 HSPs)
chr5 (31-276)||(5908760-5909003)
chr5 (4-277)||(22694972-22695243)
chr5 (9-277)||(40517559-40517824)
chr5 (32-277)||(4920601-4920844)
chr5 (3-277)||(42987550-42987820)
chr5 (1-240)||(3564835-3565070)
chr5 (1-240)||(13402110-13402348)
chr5 (1-240)||(30996341-30996578)
chr5 (1-240)||(15889955-15890189)
chr5 (3-240)||(20973592-20973828)
chr5 (84-277)||(35311649-35311840)
chr5 (4-203)||(10126855-10127053)
chr5 (83-240)||(17853399-17853555)
chr5 (83-240)||(4582944-4583101)
chr5 (1-237)||(12834684-12834921)
chr5 (1-240)||(28045396-28045638)
chr5 (1-240)||(12866658-12866897)
chr5 (6-240)||(6369442-6369678)
chr5 (1-240)||(27302842-27303080)
chr5 (83-240)||(1218582-1218737)
chr5 (83-237)||(29246061-29246215)
chr5 (30-240)||(6156025-6156237)
chr5 (1-237)||(33862294-33862527)
chr5 (137-240)||(6092625-6092728)
chr5 (1-237)||(38006579-38006815)
chr5 (9-237)||(3572977-3573203)
chr5 (1-145)||(6093307-6093450)
chr5 (30-240)||(35194096-35194304)
chr5 (5-241)||(12447130-12447364)
chr5 (37-237)||(2984929-2985126)
chr5 (15-237)||(27088462-27088682)
chr5 (100-237)||(30115326-30115462)
chr5 (30-240)||(2412833-2413041)
chr5 (91-219)||(8453500-8453627)
chr5 (1-68)||(20633903-20633971)
chr5 (1-68)||(20650017-20650085)
chr5 (15-210)||(42717769-42717957)
chr5 (33-235)||(18206793-18206995)
chr5 (1-68)||(12712802-12712871)
chr5 (1-68)||(18116805-18116873)
chr5 (1-68)||(43523481-43523549)
chr5 (1-59)||(12235932-12235991)
chr5 (182-237)||(33420440-33420494)
chr5 (1-68)||(23045290-23045358)
chr5 (1-68)||(34258973-34259041)
chr5 (159-230)||(2681096-2681166)
chr5 (27-66)||(15564427-15564466)
chr5 (1-68)||(12774066-12774135)
chr5 (10-66)||(8453651-8453707)
chr5 (154-230)||(20634055-20634130)
chr5 (154-230)||(20650169-20650244)
[»] scaffold0189 (1 HSPs)
scaffold0189 (1-276)||(4002-4275)
[»] scaffold1630 (1 HSPs)
scaffold1630 (1-180)||(1367-1545)
[»] scaffold0519 (1 HSPs)
scaffold0519 (1-240)||(10046-10279)
[»] scaffold0095 (1 HSPs)
scaffold0095 (83-208)||(32668-32792)
[»] scaffold0007 (1 HSPs)
scaffold0007 (32-240)||(197433-197639)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-201)||(14290-14487)
[»] scaffold0294 (1 HSPs)
scaffold0294 (5-234)||(14525-14751)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-241)||(33139-33376)
[»] scaffold0135 (1 HSPs)
scaffold0135 (3-228)||(35900-36128)
[»] scaffold0027 (1 HSPs)
scaffold0027 (100-240)||(6249-6388)
[»] scaffold0097 (2 HSPs)
scaffold0097 (101-218)||(33427-33543)
scaffold0097 (1-70)||(33327-33398)
[»] scaffold0022 (1 HSPs)
scaffold0022 (100-237)||(90440-90576)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-68)||(56195-56263)
[»] scaffold0008 (2 HSPs)
scaffold0008 (7-68)||(67476-67540)
scaffold0008 (7-68)||(75319-75383)
[»] scaffold0198 (1 HSPs)
scaffold0198 (4-68)||(21018-21083)


Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 31918905 - 31918629
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||||||||||||||||||| ||| ||| ||  ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
31918905 tccccgatgggttcgggtatccccgccccattcctttccccgcattgaataatttttttaataaaaaatataagttttttttgcatccccaagagcaacg 31918806  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
31918805 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 31918706  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||    
31918705 aattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttc 31918629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 277
Target Start/End: Complemental strand, 6382611 - 6382343
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||        | ||||||||||||||||||||||||    
6382611 gggttcgggtatccccgccccatccccgtccccgcattgaataatttttttagtaaaaaatataagttttttttgtatccccaagagcaacgttgtaata 6382512  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
6382511 cattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 6382412  T
209 aataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    || |||||||||||||||||||||||||| |||       |||||||||||||||||| ||||||||||    
6382411 aacaaaataacataacatatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttc 6382343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 9 - 277
Target Start/End: Complemental strand, 5902951 - 5902685
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
5902951 gggttcgggtatccccgccccatctccgtccccgcattgaataatttttttaataaaaaatataagttttttt-gcatccccaagagcaacgttgtaata 5902853  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
5902852 cattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 5902753  T
209 aataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    || ||||||| ||||||||||||||||||||||       |||||||||||||||||| ||||||||||    
5902752 aacaaaataagataacatatcaacataaagtag-ttttttacatttgggacgggtttgggtatgggttc 5902685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 21423611 - 21423884
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    |||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||    
21423611 tccccgataggttcgggtatccctgccccatccccgtccctgcattgaataatttttttaataaaaaatataagttttttt-gcatccccaagagcaacg 21423709  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
21423710 ttgtaatacattatccaacaataaattcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 21423809  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggtt 276  Q
    |||||||||| ||||||| ||||||||||||||||||||||       |||||||||||||||||| |||||||||    
21423810 aattatcaaacaaaataatataacatatcaacataaagtag-ttttttacatttgggacgggtttgtgtatgggtt 21423884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 277
Target Start/End: Original strand, 44317312 - 44317559
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||| ||||    
44317312 atccccgtccccgcattgaataatttttttaataaaaaatataagttttttttgcatccccaagagcaacgttgtaatacattatccaacaataaactca 44317411  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
44317412 ctttcacatttgttagacaaaattatttagttgatcctttaaatatcaatcgtagtttttattaacatgacaattatcaaacaaaataacataacatatc 44317511  T
230 aacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||||||||       |||||||||||||||||| ||||||||||    
44317512 aacataaagtagtttttttacatttgggacgggtttgggtatgggttc 44317559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 7608720 - 7608994
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
7608720 tccccgaggggttcgggtatccccgcaccatccccgtccccgcattgaataatttttttaataaaaaatataagttttttt-gcatccccaagagcaacg 7608818  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
7608819 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgacagtttttattaacatgac 7608918  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||||||||| |||||       |||||||||||||||||| ||||||||||    
7608919 aattatcaaacaaaataacataacatatcaacatagagtag-ttttttacatttgggacgggtttgggtatgggttc 7608994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 47550698 - 47550424
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| || |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||         ||||||||||||||||||    
47550698 tccccgacggattcgggtatccccgccccatccccgtccccgcattgaata-tttttttaataaaaaatagaatttttttttgcatccccaagagcaacg 47550600  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
47550599 ttgtaatacattatccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgac 47550500  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||||||||||| ||        |||||||||||||||||| ||||||||||    
47550499 aattatcaaacaaaataacataacatatcaacataaaata-attttttacatttgggacgggtttgggtatgggttc 47550424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 11027822 - 11028060
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||    
11027822 tccccgacaggttcgggtatccccgcctcatccccgtccccgcattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacg 11027920  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
11027921 ttgtaatatattatccaacaataagatcactttcacatttgttagacaaaatgatttagttgatcctttaaatataaatagtagtttttattaacatgac 11028020  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||||||||||||| ||||||||    
11028021 aattatcaaacaaaataacataacatatcaatataaagta 11028060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 55826968 - 55826694
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||||||||    
55826968 tccccgacgggttcgggtatccccgctccatccccgtccccgcattgaataatttttttaataaaaa-tataagttttttt-gcatccccaagagcaacg 55826871  T
101 ttgtaatacattatccaacaataagctc--acttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
    ||||||||||||||||||||||||||||  ||||| |||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||| ||    
55826870 ttgtaatacattatccaacaataagctctcactttcacatctgtcagacaaaattat--agttgatcctttaaatatcaatggtagtttttattaacgtg 55826773  T
199 acaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||||||  |||||||||    
55826772 acaattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttggatatgggttc 55826694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 11123212 - 11122940
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||||| || ||| |||||||||||||||||||||||||  ||||||         |||||||||||||||||    
11123212 tccccgacgggttcgggtatccccgccccatcctcgaccc-gcattgaataatttttttaataaaa--tataagtttttttgtcatccccaagagcaacg 11123116  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
     ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
11123115 ctgtaatacattattcaacaataaactcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtactttttattaacatgac 11123016  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||| ||| ||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||    
11123015 aattataaaacaaaataacaaaacatatcaacataaagtag-ttttttacatttgggacgggtttgagtatgggttc 11122940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 48459312 - 48459469
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
48459312 gcatctccaagagcaacgttgtaatacattatccaacaatatgctcactttaacattttttagacaaaatgatttagttgatcctttaaatatcaatggt 48459411  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
48459412 agtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagta 48459469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 4766652 - 4766419
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataat-ttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaat 107  Q
    |||||||||||||| |||||||||||| | ||||||| ||||||  ||||||||||||||||| |||        |||||||||| ||||||||||||||    
4766652 gggttcgggtatccttgcctcatccccattcccgcatcgaataaacttttttaataaaaaatagaagttttttttgcatccccaaaagcaacgttgtaat 4766553  T
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtag-tttttattaacatgacaattat 206  Q
    |||||||||||||||| | | ||||| ||||||||||||   ||| |||||||| |||||||||||||||||| ||| ||||||||||||||||||||||    
4766552 acattatccaacaatatgtttactttaacatttgttagaggtaatgatttagtttatcctttaaatatcaatgatagttttttattaacatgacaattat 4766453  T
207 caaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||||||||||||||||||||||||||    
4766452 caaataaaataacataacatatcaacataaagta 4766419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 240
Target Start/End: Original strand, 42774512 - 42774749
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgt 101  Q
    ||||| |||||||||||||||  |||||||| | |||||| || ||||||||||||| ||||||||||| ||         |||||||||| ||||||||    
42774512 cccgacgggttcgggtatcccaacctcatcctcatccccgtatcgaataattttttttaataaaaaatagaa-atttttttgcatccccaaaagcaacgt 42774610  T
102 tgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgaca 201  Q
    |||||||||||||||||||||| | ||| ||| ||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
42774611 tgtaatacattatccaacaatatgttcattttaacatttgttagaaggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgaca 42774710  T
202 attatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||| |||||||||| ||||||||||||||||||    
42774711 attatcaaacaaaataacatgacatatcaacataaagta 42774749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 39046755 - 39046940
Alignment:
53 tttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaat 152  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||  |||    
39046755 tttttttaataaaaaatataagttttttt-gcatccccaagagcaacgttgtaatacattatccaacaatatgctcattttaacatttgttagacggaat 39046853  T
153 tatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
     |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
39046854 gatttagttaatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagta 39046940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 116 - 272
Target Start/End: Original strand, 43893092 - 43893247
Alignment:
116 caacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaa 215  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
43893092 caacaataagctcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 43893191  T
216 taacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatg 272  Q
    ||||||||||||||||||||||||||       |||||||||||||||||| |||||    
43893192 taacataacatatcaacataaagtag-ttttttacatttgggacgggtttgggtatg 43893247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 277
Target Start/End: Original strand, 32585247 - 32585513
Alignment:
10 ggttcgggtatccctgcctcatccccgtccccgcattgaataa--tttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaat 107  Q
    |||||||||||||  |||||||||||||||||||||||||||   |||||||||||||||||| | |        ||||||| ||||||||| |||||||    
32585247 ggttcgggtatccacgcctcatccccgtccccgcattgaatatattttttttaataaaaaatagatgtttttt--gcatccc-aagagcaacattgtaat 32585343  T
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatg-gtagtttttattaacatgacaattat 206  Q
    |||||||| ||||||| ||||||||| ||| |||||||||  ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||    
32585344 acattatctaacaatacgctcactttaacaattgttagacggaatgatttagttgatcctttaaatatcaatgattagtttttattaacatgacaattat 32585443  T
207 caaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||| |||||||||  |||||| |||||||||||        |||||||||||||||||| ||||||||||    
32585444 caaacaaaataacaagacatataaacataaagta-agtttttacatttgggacgggtttgggtatgggttc 32585513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 47239649 - 47239495
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    |||||| ||||||||||||||||| |||||||||| ||||| ||||||||| ||||||| || |  |||| ||||||||||||||||||||||||||| |    
47239649 gcatcctcaagagcaacgttgtaaaacattatccagcaatatgctcactttaacatttgataaatgaaatgatttagttgatcctttaaatatcaatgat 47239550  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
47239549 agtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaa 47239495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 31752287 - 31752444
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    |||||| ||||||||||||||||| |||||||||| ||||| ||||||||| ||||||| |||||  ||| |||||||||||| ||||||||||| || |    
31752287 gcatcctcaagagcaacgttgtaaaacattatccagcaatatgctcactttaacatttgatagacggaatgatttagttgatcttttaaatatcattgtt 31752386  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
31752387 agtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagta 31752444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 30 - 215
Target Start/End: Complemental strand, 15987556 - 15987372
Alignment:
30 atccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctc 128  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||| |||||||||| |||  |||    
15987556 atccctgtccccacattgaataattttttttaataaaaaatataagttttttt-gcatccccaagagcaacgttgtaatatattatccaactatactctc 15987458  T
129 acttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaa 215  Q
    ||||  |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
15987457 actta-acatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 15987372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 19534213 - 19534440
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataattttt-ttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaat 107  Q
    ||||| ||||||| |  |||||||||| ||||||||||||||||||||| ||||||||||||| |||         || |||  |||| || ||||||||    
19534213 gggtttgggtatctccacctcatccccatccccgcattgaataatttttattaataaaaaatagaagtttttttt-caacccttagagaaatgttgtaat 19534311  T
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatc 207  Q
     ||||||| ||||||| ||||||||| |||||||||||||  | | ||||||||| ||||||| ||||||||||||||||||| ||||| ||||||||||    
19534312 ccattatctaacaatatgctcactttaacatttgttagaccgattgatttagttgctcctttagatatcaatggtagttttta-taacacgacaattatc 19534410  T
208 aaataaaataacataacatatcaacataaa 237  Q
    ||| |||||||||| |||||||||||||||    
19534411 aaacaaaataacatgacatatcaacataaa 19534440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 37348873 - 37349108
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatt-tttttaataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||| |||          ||||| | ||| ||     
37348873 tccccgacgggttcgggtatccccgcctcatccccgtccccgcattgaataactgtttttaataaaaaatagaagtttttttgaaatcccta-gagaaat 37348971  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||| ||||| ||||||||| | |||||||||||  | | ||||||||| ||||||||||||||| ||||||||||| ||||  ||    
37348972 gttgtaatgcattatccagcaatatgctcactttaagatttgttagaccgattaatttagttgctcctttaaatatcaacggtagttttta-taacgcga 37349070  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
     |||||||||| ||||||||||  ||||||||||||||    
37349071 gaattatcaaacaaaataacatggcatatcaacataaa 37349108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 32 - 201
Target Start/End: Complemental strand, 53906596 - 53906427
Alignment:
32 ccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcac 130  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||        ||||||||||||||||||||||||||||| ||||||||||| | ||||    
53906596 ccccatccccgcattgaataattttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgttgtaatacataatccaacaatacgttcac 53906498  T
131 ttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgaca 201  Q
    ||| ||||||||||||   ||| ||||||||||||| |||||||||||| |||||||||||||||||||||    
53906497 tttaacatttgttagaaggaatgatttagttgatccattaaatatcaatagtagtttttattaacatgaca 53906427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 241
Target Start/End: Complemental strand, 1724647 - 1724416
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaat 107  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||        ||| |||| |||| ||  ||  |||    
1724647 gggtttgggtatccccgcctcatccccgtccccacattgaataattttttttaataaaaaatagaagttttttt-gcaacccctagagaaatattaaaat 1724549  T
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatc 207  Q
     ||||||||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||   ||||||||    
1724548 gcattatccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaattatc 1724450  T
208 aaataaaataacataacatatcaacataaagtag 241  Q
     || |||||||||| |||||||||||||||||||    
1724449 taacaaaataacatgacatatcaacataaagtag 1724416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 42299630 - 42299779
Alignment:
91 aagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagttttta 190  Q
    |||||||| ||||||||||| |||||||||||| | ||||||| |||||||||||| |  || ||||||||| || ||||||||||||  ||||||||||    
42299630 aagagcaatgttgtaatacaatatccaacaatatgttcactttaacatttgttagagaggatgatttagttgctcatttaaatatcaacagtagttttta 42299729  T
191 ttaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||| ||||||||||||| ||||||||||  |||||||||||||||||    
42299730 ttaacaagacaattatcaaacaaaataacatggcatatcaacataaagta 42299779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 425586 - 425811
Alignment:
15 gggtatccctgcctcatccccgtccccgcattgaataatttttt-taataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacatta 113  Q
    ||||||||| | |||||||||||||| | ||||||||||||||| || ||||||||| |||          |  ||| |||| || ||||||||||||||    
425586 gggtatccccgtctcatccccgtccctgtattgaataattttttatattaaaaaatagaagttttttttctaatccctagagaaatgttgtaatacatta 425685  T
114 tccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataa 213  Q
    |||| ||||| | ||||||| | |||||||||||  | | ||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| ||    
425686 tccagcaatatgttcactttaagatttgttagaccgattgatttagttgttcttttaaatatcaatggtagttttta-taacatgacaattatcaaacaa 425784  T
214 aataacataacatatcaacataaagta 240  Q
    ||||||||  |||||||||||||||||    
425785 aataacatggcatatcaacataaagta 425811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 238
Target Start/End: Complemental strand, 28695456 - 28695251
Alignment:
32 ccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcact 131  Q
    |||||||| || ||||| || ||||||||||||||||||||||        ||| || ||||||||| |||| ||| ||||||||||||||| ||||| |    
28695456 ccccgtcctcgaattgagtattttttttaataaaaaatataagttttttt-gcagcctcaagagcaatgttgcaatgcattatccaacaatacgctcatt 28695358  T
132 ttta-catttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    |||| ||||||||| ||  ||| ||||||||| |||||||||||| |||| |||||||||| ||| |||||||||||||||||||||||||  |||||||    
28695357 tttaacatttgttaaaccgaatgatttagttgctcctttaaatattaatgatagtttttat-aacgtgacaattatcaaataaaataacattgcatatca 28695259  T
231 acataaag 238  Q
    ||||||||    
28695258 acataaag 28695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 30 - 277
Target Start/End: Complemental strand, 6482352 - 6482106
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnn-gcatccccaagagcaacgttgtaatacattatccaacaataagctc 128  Q
    ||||||||||||||||||||||||||||||||||||||||| |||         | | |||| |||| ||  |||||||| |||||| ||||||| | ||    
6482352 atccccgtccccgcattgaataatttttttaataaaaaatagaagtttttttttgtaacccctagagaaattttgtaataaattatc-aacaatatgttc 6482254  T
129 acttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatat 228  Q
    ||||| |||||||||||||  | | ||||||||  ||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||  |||||    
6482253 actttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgttagttttta-taacacgacaattatcaaacaaaataacatggcatat 6482155  T
229 caacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||| ||||| |||        ||||||||||||||||| ||||||||||    
6482154 caatataaattagtttttttgcatttgggacgggtttgggtatgggttc 6482106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 240
Target Start/End: Original strand, 37107170 - 37107399
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    ||||||||||||||| |||| ||||||||||   ||||||||| |||||||||||||||||| |||        ||| |||| | |  || ||||||||     
37107170 gggttcgggtatccccgccttatccccgtcctgccattgaatattttttttaataaaaaatagaagttttttt-gcaacccctataaaaatgttgtaatg 37107268  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
    ||||||||| ||||| ||||| ||| | |||||| ||||  | | ||||||||| | ||||||||| |||||||||||||||| |||||| |||||||||    
37107269 cattatccagcaatatgctcattttaatatttgtcagaccgattgatttagttgcttctttaaataccaatggtagtttttat-aacatggcaattatca 37107367  T
209 aataaaataacataacatatcaacataaagta 240  Q
    || |||||||||| ||||||||||||||||||    
37107368 aacaaaataacatgacatatcaacataaagta 37107399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 7985468 - 7985231
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaata-at-ttttttaataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    ||||||| ||||||||||||||| ||| ||||| ||||| ||||||||||| || ||||||||||||||||| |||         || |||  |||  ||    
7985468 tccccgacgggttcgggtatccccgccccatcctcgtcctcgcattgaatatatattttttaataaaaaatagaagttttttta-caacccatagataaa 7985370  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
     |||||||| ||||||||| |||||   ||||||| ||||||||||||| || | ||||||||| || |||||||||||| ||||||||||  ||||| |    
7985369 tgttgtaatgcattatccatcaatattttcactttaacatttgttagaccaattgatttagttgctcatttaaatatcaacggtagttttttataacacg 7985270  T
199 acaattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||||| |||||||||| || ||||||||||||    
7985269 acaattatcaaacaaaataacatgacttatcaacataaa 7985231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 12825777 - 12825568
Alignment:
29 catccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctc 128  Q
    |||| |||| ||||||||||||||||||||||||| |||||| |||        ||| |||| |||| || |||||||| ||||||| |||||||  |||    
12825777 catctccgtgcccgcattgaataatttttttaatataaaatagaagttttttt-gcaacccctagagaaatgttgtaatgcattatctaacaatatcctc 12825679  T
129 acttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatat 228  Q
    ||||| | |||| |||||| || | ||||||||| ||||||||||||||||  ||||||||| ||||| || |||||||||| |||||||||| | ||||    
12825678 actttaatatttattagaccaattgatttagttgctcctttaaatatcaattttagttttta-taacacgataattatcaaacaaaataacatgatatat 12825580  T
229 caacataaagta 240  Q
    ||||||||||||    
12825579 caacataaagta 12825568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 228
Target Start/End: Original strand, 9230034 - 9230262
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaa-tataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||| |||||||||||| || || ||||| || ||||||||||||||||||||||| ||||||||| ||||||        ||| |||| |||| || |    
9230034 cccgacgggttcgggtattcccgcttcatctccatccccgcattgaataatttttttgaataaaaaaatataagttttatt-gcaacccctagagaaatg 9230132  T
101 ttgtaatacattatccaacaataagctcactttta-catttgttagacaaaattatttagttgat--cctttaaatatcaatggtagtttttattaacat 197  Q
     ||||||  |||||||||||||| | ||||||||| ||||||||||||  | | ||||||||| |  |||||||||||||||||||||||||| |||||     
9230133 atgtaatgtattatccaacaatatgttcacttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagttttta-taacac 9230231  T
198 gacaattatcaaataaaataacataacatat 228  Q
    |||| |||||||| |||||||||| ||||||    
9230232 gacagttatcaaacaaaataacatgacatat 9230262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 32596438 - 32596294
Alignment:
92 agagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttat 191  Q
    ||||||| | |||||||||||||| ||||||| ||||||||| | |||||||||||  ||| ||||||||| ||||| |||||| |||| |||||||||     
32596438 agagcaatgctgtaatacattatctaacaatatgctcactttaaaatttgttagacttaatgatttagttgttccttcaaatattaatgctagttttta- 32596340  T
192 taacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||||||||||||  |||| ||||   |||||||||||||    
32596339 taacatgacaattatcaaaccaaatgacatggtatatcaacataaa 32596294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 39188273 - 39188499
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaat 107  Q
    ||||||| ||||||| || |||||||  || |||||||||||||||||||| |||||||||||||||        ||| |||  |||| || ||||||||    
39188273 gggttcgagtatccccgcttcatcccgatctccgcattgaataattttttttaataaaaaatataagttttttt-gcaacccatagagaaatgttgtaat 39188371  T
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatc 207  Q
     ||| | ||||||||| | ||||||| ||||||||||||   | | ||||||||  | |||||||||| |||||||||||||  ||||| |||| |||||    
39188372 gcataacccaacaatatgttcactttaacatttgttagaacgattgatttagttttttctttaaatataaatggtagttttt--taacacgacagttatc 39188469  T
208 aaataaaataacataacatatcaacataaa 237  Q
    ||| |||||||||| |||||||||||||||    
39188470 aaacaaaataacatgacatatcaacataaa 39188499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 241
Target Start/End: Original strand, 26564681 - 26564820
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||||||||||| | ||||||| ||||||||| |||  | | ||||||||| ||| ||||||||||||| ||||||||| ||||| | |    
26564681 ttgtaatgcattatccaacaatatgttcactttaacatttgtttgaccgattgatttagttgttccgttaaatatcaatgatagttttta-taacacggc 26564779  T
201 aattatcaaataaaataacataacatatcaacataaagtag 241  Q
    | |||||||| ||| |||||| |||||||||||||||||||    
26564780 agttatcaaacaaactaacatgacatatcaacataaagtag 26564820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 43893005 - 43893071
Alignment:
8 tgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataag 74  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
43893005 tgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatataag 43893071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 29755668 - 29755456
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataa-tttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaat 107  Q
    |||||||| |||||| ||| |||||| |||| |||||||||||| |||||||||||||||||  |||        ||| |||  |||| || ||||||||    
29755668 gggttcggatatccccgccccatccctgtcctcgcattgaataaatttttttaataaaaaattgaagttttttttgcaacccttagagaaatgttgtaat 29755569  T
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatc 207  Q
     |||||||||||||||  |||| ||| ||||||||||||   | | ||||||||  | |||||||||||||||||||| |||| ||||| |  |||||||    
29755568 gcattatccaacaatatactcattttaacatttgttagatcgattgatttagttacttctttaaatatcaatggtagtgttta-taacacggtaattatc 29755470  T
208 aaataaaataacat 221  Q
    ||| ||||||||||    
29755469 aaacaaaataacat 29755456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 13015632 - 13015550
Alignment:
87 ccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatccttt 169  Q
    |||||||||||| ||||||||||||||||||| |||| | ||||||| |||| ||||||||  ||| ||||||||| ||||||    
13015632 ccccaagagcaatgttgtaatacattatccaataatatgttcactttaacatctgttagaccgaataatttagttgctccttt 13015550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 13015446 - 13015361
Alignment:
157 tagttgatcctttaaatatcaatggtagttttt-----attaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||| ||||||||||||||||||||||||||     || || |||| |||||||||| |||||||||| |||||||||||||||    
13015446 tagttgctcctttaaatatcaatggtagtttttataacatgaaaatgaaaattatcaaacaaaataacatgacatatcaacataaa 13015361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 13770792 - 13770581
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    ||||||||||||||| |||  ||||  ||||| | ||||||||||||||||||||||||||| |||        ||| |||  | |   |  |||||||     
13770792 gggttcgggtatccccgcccgatccatgtccctgaattgaataatttttttaataaaaaatagaagttttttttgcaacccataaatatatattgtaatg 13770693  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
     |||||||||||||| | ||||||| ||||||||| |||  | | ||||||||| ||||| |||||| |||||| ||||||| ||||| |  ||||||||    
13770692 tattatccaacaatatgttcactttaacatttgtttgaccgattgatttagttgctccttcaaatattaatggtcgttttta-taacacggtaattatca 13770594  T
209 aataaaataacat 221  Q
    || ||||||||||    
13770593 aacaaaataacat 13770581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 39375180 - 39375253
Alignment:
152 ttatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacat 226  Q
    ||||||||||| |||||||||||| | |||||||||||| ||||| | ||||||||||| |||||||||| ||||    
39375180 ttatttagttgttcctttaaatattagtggtagttttta-taacacggcaattatcaaacaaaataacatgacat 39375253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 29527693 - 29527768
Alignment:
154 atttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    ||||||||| |||||||| ||||||||  |||| |||| | ||||||||||||||||| |||||||||| |||||||    
29527693 atttagttgctcctttaactatcaatgaaagttcttat-atcatgacaattatcaaatcaaataacatagcatatca 29527768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 6268300 - 6268354
Alignment:
16 ggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaata 70  Q
    |||||||| ||||||||||| ||||| ||||||||  ||||||||||||||||||    
6268300 ggtatccccgcctcatccccatccccacattgaatcctttttttaataaaaaata 6268354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 52602873 - 52602916
Alignment:
25 gcctcatccccgtccccgcattgaataatttttttaataaaaaa 68  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||    
52602873 gcctcatccccgtacccgcaatgaatcatttttttaataaaaaa 52602916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 24475204 - 24475146
Alignment:
10 ggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaa 68  Q
    |||||||||||||| ||||||| |||  ||| ||| || ||||||||||||||||||||    
24475204 ggttcgggtatccccgcctcatacccaaccctgcagtggataatttttttaataaaaaa 24475146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16217019 - 16216978
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccg 42  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||    
16217019 tccccgacgggttcgggtatccccgccccatccccgtccccg 16216978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 568144 - 568212
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    ||||| ||| |||||||||| ||  || ||||||||||| |||| ||||| ||||||||||||||||||    
568144 tccccaatgagttcgggtattcccaccacatccccgtcctcgcagtgaatcaatttttttaataaaaaa 568212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11172695 - 11172763
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| ||  || |||||| ||||||| | ||||| ||||||||||||||||||    
11172695 tccccaatgggttcgggtattcccaccgcatccctgtccccgtagtgaatcaatttttttaataaaaaa 11172763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 30846689 - 30846965
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
30846689 tccccgacgggttcgggtatccccgccccatccccgtcctcgcattgaataatttttttaataaaaaatataagttttttttgcatccccaagagcaacg 30846788  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
30846789 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 30846888  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| ||||||||||||||||||||||||||||||       ||| |||||||||||||| ||||||||||    
30846889 aattatcaaacaaaataacataacatatcaacataaagtagtttttttacaattgggacgggtttgggtatgggttc 30846965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 36128452 - 36128176
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| |||||| |||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||        ||||||||||||||||||    
36128452 tccccgacgggttcaggtatccccgccccatccccgtctctgcattgaataatttttttaataaaaaatataagttttttttgcatccccaagagcaacg 36128353  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
36128352 ttgtaatacattatccaacaataagttcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 36128253  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||    
36128252 aattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttc 36128176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 24414476 - 24414202
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||    
24414476 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacg 24414378  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
24414377 ttgtaatacattatctaacaataagctcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgac 24414278  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||    
24414277 aattatcaaacaaaataacataacatatcaacataaagtag-ttttttacatttgggacgggtttgggtatgggttc 24414202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 13830480 - 13830755
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||    
13830480 tccccgacgggttcgggtatccccgccccatccccatccccgcattgaataatttttttaataaaaaatagaagttttttttgcatccccaagagcaacg 13830579  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
13830580 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttatttacatgac 13830679  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||    
13830680 aattatcaaacaaaataacataacatatcaacataaagta-attttttacatttgggacaggtttgagtatgggttc 13830755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 9 - 277
Target Start/End: Complemental strand, 42798325 - 42798058
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    ||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||    
42798325 gggttcgggtatccacgccccatccccgtccccacattgaataatttttttaataaaaaatagaagtttttta-gcatccccaagagcaacgttgtaata 42798227  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
42798226 cattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 42798127  T
209 aataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    || |||||||||||||||||||||||||||||        ||||||||||| |||||| ||||||||||    
42798126 aacaaaataacataacatatcaacataaagtaatttttttacatttgggacaggtttgtgtatgggttc 42798058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 10208774 - 10208500
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||||| | |||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||    
10208774 tccccgacgggttcgggtatccccgccccatcctcttccccgcattgaataatttttttaataaaaaatagaaggtttttt-gcatccccaagagcaacg 10208676  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
10208675 ttgtaatacattatccaacaataaactcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgac 10208576  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| ||||||||||||||||| |||||||||||        ||||||||||| |||||||||||||||||    
10208575 aattatcaaacaaaataacataacatattaacataaagta-attttttacatttgggactggtttgagtatgggttc 10208500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 30 - 277
Target Start/End: Original strand, 9632160 - 9632405
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    |||||||||||||||||||||||||||||| || |||||||||||        ||||||||||||| |||||||||||||||||||||||||||||||||    
9632160 atccccgtccccgcattgaataatttttttgatgaaaaatataagttttttt-gcatccccaagagaaacgttgtaatacattatccaacaataagctca 9632258  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
9632259 ctttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaaaataacataacatatc 9632358  T
230 aacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||||||||       |||||||||||||||||| ||||||||||    
9632359 aacataaagtag-ttttttacatttgggacgggtttgggtatgggttc 9632405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 8916280 - 8916007
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||  |||||| ||||| |||||||||| |||||||||||||||||| |||        ||||||| ||||||||||    
8916280 tccccgacgggttcgggtatccccgctccatccctgtccctgcattgaata-tttttttaataaaaaatagaagttttttt-gcatccctaagagcaacg 8916183  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
8916182 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaataatttagttaatcctttaaatatcaatggtagtttttattaacatgac 8916083  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||    
8916082 aattatcaaacaaaataacataacatatcaacataaaata-attttttacatttgggacgggtttgagtatgggttc 8916007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 37999232 - 37999466
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttg 103  Q
    |||| ||||||||||||||| ||| ||||||||| |||||||||||||||||||| ||||||||||| |||        |||||||||||||||||||||    
37999232 ccgacgggttcgggtatccccgccccatccccgttcccgcattgaataatttttt-aataaaaaatagaagttttttt-gcatccccaagagcaacgttg 37999329  T
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    ||||||||| || ||| |||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
37999330 taatacattttctaactataatctcactttcacatttgttagacaaaatgatttagttgattctttaaatatcaatggtagtttttattaacatgacaat 37999429  T
204 tatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||| |||||||||||||||||||||||||||||    
37999430 tatcaaacaaaataacataacatatcaacataaagta 37999466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 31 - 240
Target Start/End: Original strand, 10920420 - 10920628
Alignment:
31 tccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcac 130  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||        |||||||||| ||||||||||||||||||||||||||||||| |||||    
10920420 tccccgtccctgcattgaataatttttttattaaaaaatagaagtttttta-gcatccccaatagcaacgttgtaatacattatccaacaataacctcac 10920518  T
131 ttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
10920519 tttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatca 10920618  T
231 acataaagta 240  Q
    ||||||||||    
10920619 acataaagta 10920628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 30 - 237
Target Start/End: Complemental strand, 18106405 - 18106199
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||| |||    
18106405 atccccgtctccgcattgaataatttttttaataaaaaatagaa-atttttttgcatccccaagagcaacgttgtaatacattatccaacaataagttca 18106307  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||    
18106306 ctttcacatttgttagacaaaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatgtatc 18106207  T
230 aacataaa 237  Q
    ||||||||    
18106206 aacataaa 18106199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 13705692 - 13705467
Alignment:
15 gggtatccctgcctcatccccgtccccgcattgaataattttttt--aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacatt 112  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||  ||||||||||| |||        | |||||||||||||||||||||||||||     
13705692 gggtatccccgcctcatccccatccccgcattgaataatttttttttaataaaaaata-aagttatttt-gtatccccaagagcaacgttgtaatacatc 13705595  T
113 atccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaata 212  Q
    ||||||||||| ||||||||| |||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
13705594 atccaacaatacgctcactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaaca 13705495  T
213 aaataacataacatatcaacataaagta 240  Q
    ||||||||| ||||||||||||||||||    
13705494 aaataacatgacatatcaacataaagta 13705467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 45256568 - 45256806
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||||||||| |||||||||  || |||||||||||||||||||||||||||||||||||||||  | |||        |||| || ||||||||||    
45256568 tccccgatgggtttgggtatccccaccccatccccgtccccgcattgaataatttttttaataaaaatcagaagttttttt-gcattcctaagagcaacg 45256666  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||| |||||||| |||||||| | ||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||||||||    
45256667 ttgtagtacattattcaacaatacgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgac 45256766  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||  ||||||||| ||||||||    
45256767 aattatcaaacaaaataacaagacatatcaaaataaagta 45256806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 37473074 - 37472853
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtcccc-gcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    ||||||| |||||||||||||||  |  ||||||| ||||| | || ||||||||||||| ||||||||||| |||        ||||||||||||| ||    
37473074 tccccgacgggttcgggtatccccactccatccccatcccccgtatcgaataattttttttaataaaaaatagaagtgtttt--gcatccccaagagaaa 37472977  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
37472976 cgttgtaatacattatccaacaatatgctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatg 37472877  T
199 acaattatcaaataaaataacata 222  Q
    |||||||||||| |||||||||||    
37472876 acaattatcaaacaaaataacata 37472853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 37106525 - 37106681
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||    
37106525 gcatccctaagagcaacgttgtaatacattatccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggt 37106624  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||    
37106625 agtttttattaacatgacaattatcaaacaaaataacat-atatatcaacataaagta 37106681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 7314994 - 7314757
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatt-tttttaataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| |||||||||||||||  || ||| ||| |||||| || |||||||| |||||||||||||||| |||        |||||| ||||||||||    
7314994 tccccgacgggttcgggtatccccaccccattcccatccccgtatcgaataattgtttttaataaaaaataaaagttttttttgcatcctcaagagcaac 7314895  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    ||||||| |||||||||||||||| || |||||| ||||||| |||||  ||| ||||||||||||||||||||||||||| ||||||||||||||||||    
7314894 gttgtaaaacattatccaacaatatgcccactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatga 7314795  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
     | |||||||| |||||||||| |||||||||||||||    
7314794 tatttatcaaacaaaataacatgacatatcaacataaa 7314757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 12194090 - 12193933
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    |||||| |||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||  ||| || ||||||||||||||||||||||||||    
12194090 gcatcctcaagagcaacgttgtaatacattatccaacaatatgttcactttaacatttgttagacggaatgatgtagttgatcctttaaatatcaatggt 12193991  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||    
12193990 agtttttattaacatgataattatcaaacaaaataacatgacatatcaacataaagta 12193933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 45115386 - 45115537
Alignment:
85 atccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtag 184  Q
    ||||||| ||||||| ||||||||||||||| ||||||| ||||||||| |||||| ||||||||||| ||||| |||||||||||||||||||||||||    
45115386 atccccatgagcaacattgtaatacattatcaaacaatacgctcactttaacatttattagacaaaatgatttaattgatcctttaaatatcaatggtag 45115485  T
185 tttttattaacatgacaattatcaaataaaataacataacatatcaacataa 236  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
45115486 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataa 45115537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 44746427 - 44746184
Alignment:
30 atccccgtccccgcattgaataatt-tttttaataaaaaatataagnnnnnnnn-gcatccccaagagcaacgttgtaatacattatccaacaataagct 127  Q
    ||||||||||||||||||||||||| |||||||||||||| | |||         |||||||||||||||| |||||||||||||||||||||||| |||    
44746427 atccccgtccccgcattgaataattctttttaataaaaaagagaagtttttttttgcatccccaagagcaatgttgtaatacattatccaacaatatgct 44746328  T
128 cacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacata 227  Q
    |||| | |||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||||| | ||| ||||| |||||||||||||||||  ||||    
44746327 cactctaacatttgttagacggaataatttatttgctcctttaaatatcaatgatagtttttataaccattacaatgatcaaataaaataacatggcata 44746228  T
228 tcaacataaagtagnnnnnnnacatttgggacgggtttgagtatg 272  Q
    |||| ||||||| |       ||||||||||||||||||||||||    
44746227 tcaagataaagt-gattttctacatttgggacgggtttgagtatg 44746184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 6028233 - 6027998
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||||| ||||| |||||||||||  ||||||||||||||||| |||         || |||| |||| || |    
6028233 tccccgacgggttcgggtatccccgccccatcctcgtcctcgcattgaatatattttttaataaaaaatagaagttttttta-caacccctagagaaatg 6028135  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||||| |||||  |||||||| ||||||||||||| || | ||||||||| ||||||||||||||||| ||||||||  ||||| |||    
6028134 ttgtaatgcattatccatcaatattctcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatgatagttttttataacacgac 6028035  T
201 aattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| ||||||||||  | ||||||||||||    
6028034 aattatcaaacaaaataacatggcttatcaacataaa 6027998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 16105370 - 16105551
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgt 101  Q
    ||||| ||||||||||||||||||| ||||||||      ||||||||||||||||| ||||| ||||| |||        |||||||||||||||||||    
16105370 cccgacgggttcgggtatccctgccccatccccg------cattgaataattttttttaataacaaatagaagttttttt-gcatccccaagagcaacgt 16105462  T
102 tgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagttttta 190  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| ||| ||||||||||||  | |||||||||||||| ||||||    
16105463 tgtaatacattatcaaacaatacgctcactttaacatttgttagacataatgatttagttgatctgtgaaatatcaatggtaattttta 16105551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 101 - 241
Target Start/End: Complemental strand, 31942430 - 31942291
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||||||||||| | ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||||||||||||| ||||| |||    
31942430 ttgtaatgcattatccaacaatatgttcactttaacatttgttagaccgactgatttagttgctcctttaaatatcaatggtagttttta-taacacgac 31942332  T
201 aattatcaaataaaataacataacatatcaacataaagtag 241  Q
    |||||||||| ||||||||||  ||||||| ||||||||||    
31942331 aattatcaaacaaaataacatggcatatcagcataaagtag 31942291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 14540629 - 14540764
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||||  | | ||||||||| |||||||||||||    |||||||||| ||||| ||    
14540629 gttgtaatgcattatccagcaatatgctcactttaacatttgttagactgattgatttagttgctcctttaaatatc----gtagttttta-taacacga 14540723  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
14540724 caattatcaaacaaaataacatgacatatcaacataaagta 14540764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 241
Target Start/End: Complemental strand, 16226971 - 16226832
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||  ||||||||||||||   ||||||| |||||| |||||| || | ||||||||| |  |||||||||||||||||||||||| ||||| |||    
16226971 ttgtaatgtattatccaacaatatattcactttaacatttcttagaccaattgatttagttgctaatttaaatatcaatggtagttttta-taacacgac 16226873  T
201 aattatcaaataaaataacataacatatcaacataaagtag 241  Q
    ||||||||||||||||||||| ||| |||||||| ||||||    
16226872 aattatcaaataaaataacatgacaaatcaacatgaagtag 16226832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 240
Target Start/End: Complemental strand, 19105182 - 19104947
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgt 101  Q
    ||||| ||||||||||||||| |||  |||||||||||| ||||||||| ||||||| |||||||||||||||        ||| ||||  ||| || ||    
19105182 cccgacgggttcgggtatccccgccaaatccccgtccccacattgaatatttttttttaataaaaaatataagtttttt--gcaaccccttgagaaatgt 19105085  T
102 tgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgaca 201  Q
    ||||||||||| |  | ||||| ||||||||| |||||||||||||  |   ||||||||| || |||||||||| || |||||||||| ||||| | ||    
19105084 tgtaatacattgtttagcaatatgctcactttaacatttgttagaccgatcgatttagttgctcttttaaatatcgatagtagttttta-taacacggca 19104986  T
202 attatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||| ||| |||||||||| |||  |||||||||||||    
19104985 attattaaacaaaataacatgacacgtcaacataaagta 19104947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 11009068 - 11008981
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaa 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||        | ||||| ||||||||||||||||||||||||||||    
11009068 atccccgttcccgcattgaataatttttttaataaaaaatataag-tttttttgtatccctaagagcaacgttgtaatacattatccaa 11008981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 45115325 - 45115383
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt 59  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||    
45115325 tccccgacgggttcgggtatccccgcctcatccccatccccgcattgaataattttttt 45115383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 31942499 - 31942459
Alignment:
31 tccccgtccccgcattgaataattt-ttttaataaaaaata 70  Q
    ||||||||||||||||||||||||| |||||||||||||||    
31942499 tccccgtccccgcattgaataattttttttaataaaaaata 31942459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 12286076 - 12286018
Alignment:
11 gttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaat 69  Q
    ||||||||||||||| ||||||||| | ||||   ||||| ||||||||||||||||||    
12286076 gttcgggtatccctgtctcatccccatacccgtcgtgaatcatttttttaataaaaaat 12286018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 37319694 - 37319744
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt 59  Q
    |||||||||||||||  || ||||||| ||||| |||||||||||||||||    
37319694 gggttcgggtatccccaccccatccccctccccacattgaataattttttt 37319744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 14540251 - 14540294
Alignment:
33 cccgtccccgcattgaataat--ttttttaataaaaaatataag 74  Q
    ||||||||||||||||||| |  |||||||||||||||||||||    
14540251 cccgtccccgcattgaatattacttttttaataaaaaatataag 14540294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 38342736 - 38342657
Alignment:
150 aattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    |||||||  |||| |||||||| ||||||||  |||| |||| | ||||||||||||||||  ||||||||| ||||||||    
38342736 aattattcggttgctcctttaactatcaatgaaagttcttat-atcatgacaattatcaaaccaaataacatgacatatca 38342657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 35074217 - 35074493
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| |    
35074217 tccccgacgggttcgggtatccccgccccatcctcgtccccgcattgaataatttttttaataaaaaatataagttttttttgcatccccaagagcaatg 35074316  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
35074317 ttgtaatgcattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 35074416  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||    
35074417 aattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttc 35074493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 18125572 - 18125298
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||        |||||| |||||||||||    
18125572 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataagaaatataagttttttt-gcatcctcaagagcaacg 18125474  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
18125473 ttgtaatatattatccaacaataagctcactttcacatttgttagacaaaattatttagttgattctttaaatatcaatggtagtttttattaacatgac 18125374  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||| ||||| ||||    
18125373 aattatcaaacaaaataacataacatatcaacataaagtag-ttttttacatttgggacgggtttgggtatgcgttc 18125298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 16865918 - 16866192
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| |||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||    
16865918 tccccgacgggttcgggtatccccaccccatccccgtccccgcattgaataatttttttaataaaaaatagaagttttttaa-catccccaagagcaacg 16866016  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||| |    
16866017 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaatgatttagttaatcatttaaatatcaatgatagtttttattaacatggc 16866116  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||    
16866117 aattatcaaacaaaataacataacatatcaacataaagta-attttttacatttgggacgggtttgggtatgggttc 16866192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 25905377 - 25905612
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| || ||||||||||||  || ||||||||||| ||||||||||| |||||||||||||||||| |||        ||||||||||||||||||    
25905377 tccccgacggattcgggtatcccctccccatccccgtcctcgcattgaatattttttttaataaaaaataaaagttttttt-gcatccccaagagcaacg 25905475  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
25905476 ttgtaatacattatccaacaataagctcaccttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 25905575  T
201 aattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| ||||||||||||||||||||||||||    
25905576 aattatcaaacaaaataacataacatatcaacataaa 25905612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 45886109 - 45885871
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||||| |||        ||||| ||||||||||||    
45886109 tccccgacgggttcgggtatccccgccccatcaccgtccccgcattgaataatttttttattaaaaaataaaagtttttta-gcatctccaagagcaacg 45886011  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| |    
45886010 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaatgattaagttgatcctttaaatatcaatgatagtttttattaacatggc 45885911  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||||||||||||||||||||||    
45885910 aattatcaaacaaaataacataacatatcaacataaagta 45885871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 7779758 - 7779992
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaa-tataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||| ||| |||||| |||||||||||||||| |||||||||||||||| || |||        |||||||||||||||||    
7779758 tccccgacgggttcgggtatccccgccacatccc-gtccccgcattgaata-tttttttaataaaaaaatagaagtcttttt-gcatccccaagagcaac 7779854  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
7779855 gttgtaatacattatccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatga 7779954  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||| ||||||||||||||||||||||||||    
7779955 caattatcaaacaaaataacataacatatcaacataaa 7779992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 30 - 277
Target Start/End: Original strand, 17851632 - 17851877
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    ||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||| |||||||    
17851632 atccccgtccccgcattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgttgtaatacattatccaacaaaaagctca 17851730  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
17851731 ctttcacatttattagataaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatc 17851830  T
230 aacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||||||||       |||||||||| ||||||| ||||||||||    
17851831 aacataaagtag-ttttttacatttgggatgggtttgggtatgggttc 17851877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 30650379 - 30650618
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttt-taataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||||||||||||||||| || ||||||||| |||        ||||||||||||||||     
30650379 tccccgacgggttcgggtatccccgccccatcaccgtccccgcattgaataattttttatattaaaaaatagaagtttttta-gcatccccaagagcaat 30650477  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
30650478 gttgtaatacattatcaaacaataaactcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgg 30650577  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||| |||||||||||||||||||||||||||||    
30650578 caattatcaaacaaaataacataacatatcaacataaagta 30650618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 44794367 - 44794136
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttg 103  Q
    |||| |||||| ||| |||| ||| |||||||||||| |||||||||| ||||||||||||||| || |||        |||||||||||||||||||||    
44794367 ccgaagggttcaggtgtccccgccccatccccgtccctgcattgaata-tttttttaataaaaagtagaagttttttt-gcatccccaagagcaacgttg 44794270  T
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||||||||| ||||||||||||    
44794269 taatacattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcatttaagtatcaatggtagtttttagtaacatgacaat 44794170  T
204 tatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||| ||||||||||||||||||||||||||    
44794169 tatcaaacaaaataacataacatatcaacataaa 44794136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 37182036 - 37182258
Alignment:
16 ggtatccctgcctcatccccgtccccgcattgaataa--tttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacatta 113  Q
    |||||||| ||||||||||| ||||||||| ||||||  |||||||||||||||||| |||        | |||||||||||||||||||||||||||||    
37182036 ggtatccccgcctcatccccatccccgcatcgaataaattttttttaataaaaaatagaagttttttttgtatccccaagagcaacgttgtaatacatta 37182135  T
114 tccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataa 213  Q
    |||||||||| | ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
37182136 tccaacaatatgttcactttaacatttgttagacacaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37182235  T
214 aataacataacatatcaacataa 236  Q
    |||||||| ||||||||||||||    
37182236 aataacatgacatatcaacataa 37182258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 41741793 - 41741555
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| || |||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||        |||||||||||| |||||    
41741793 tccccgacggattcgggtatccccgcctcatccccatccccgcatcgaataatttttttaataaaaaatagaagttttttt-gcatccccaagaacaacg 41741695  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||  ||| ||||| ||||||| ||||||||||||||||||||||||||||||||     
41741694 ttgtaatacattatccaacaatatgctcactttaacatttgttagacgtaatgatttaattgatccgttaaatatcaatggtagtttttattaacatgat 41741595  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||| ||||||||  ||||||||    
41741594 aattatcaaacaaaataacatgacatatcagtataaagta 41741555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 24753011 - 24753196
Alignment:
88 cccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagttt 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
24753011 cccaagagcaacgttgtaatacattatccaacaataagctcactttcacatttgttagacaaaataatttagttgat-ctttaaatatcaatggtagttt 24753109  T
188 ttattaacatgacaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggt 275  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||        |||||||||||||||||| ||||||||    
24753110 ttattaacatgacaattatcaaacaaaataacataacatatcaacataaaata-attttttacatttgggacgggtttgggtatgggt 24753196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 39316742 - 39316979
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||| ||| ||||||| ||||||||| ||||| ||||||| ||||||||||| |||        ||||||||| |||||||    
39316742 tccccgacgggttcgggtatccccgccccatccccttccccgcatcgaatatttttttttaataaaaaataaaagttttttttgcatccccatgagcaac 39316841  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||  ||| ||||| | ||||||| ||||||||||||||||||||||||||||||    
39316842 gttgtaatacattatccaccaatatgctcactttaacatttgttagacgtaatgatttaatcgatccttcaaatatcaatggtagtttttattaacatga 39316941  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||| |||||||||| |||||||||||||||    
39316942 caattatcaaacaaaataacatgacatatcaacataaa 39316979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 45709125 - 45708968
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
45709125 gcatccccaagagcaacattgtaatacattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggt 45709026  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    | |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
45709025 aatttttattaatatgacaattatcaaacaaaataatataacatatcaacataaagta 45708968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 44986242 - 44986008
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| |||||||||||||||  || ||||||| |||||| || ||||||||||||| || |||||||| |||        ||||||| |||||||||    
44986242 tccccgacgggttcgggtatccccaccccatccccatccccgtatcgaataattttttttaacaaaaaataaaagtttttt--gcatccctaagagcaac 44986145  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
44986144 gttgtaatacattatccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatga 44986045  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||| |||||||||| |||||||||||||||    
44986044 caattatcaaacaaaataacat-acatatcaacataaa 44986008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 45379871 - 45380093
Alignment:
19 atccctgcctcatccccgtccccgcattgaataattttttt--aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatcc 116  Q
    ||||| ||||||| ||||| | |||||||||||||||||||  ||||||||||| |||        |||||||||||||||| ||| |||||||| ||||    
45379871 atccccgcctcattcccgttctcgcattgaataatttttttttaataaaaaatagaagttatttt-gcatccccaagagcaatgttataatacatcatcc 45379969  T
117 aacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaat 216  Q
    ||||||| ||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
45379970 aacaatacgctcactttaacatttgttagacgaactgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaat 45380069  T
217 aacataacatatcaacataaagta 240  Q
    ||||| |||| |||||||||||||    
45380070 aacatgacatgtcaacataaagta 45380093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 116 - 277
Target Start/End: Original strand, 21702522 - 21702682
Alignment:
116 caacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaa 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
21702522 caacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatataaatggtagtttttattaacatgacaattatcaaacaaaa 21702621  T
216 taacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||||||||||||||||||||||       |||||||||||||||| | ||||||||||    
21702622 taacataacatatcaacataaagtag-ttttttacatttgggacgggttggggtatgggttc 21702682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 38140056 - 38139902
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||| |    
38140056 gcatccccaagagtaacgttgtaatacattatccaacaatacgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgat 38139957  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
38139956 agtttttattaacatgacaattatcaaacaaaataacatgacatatcaatataaa 38139902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 43507181 - 43507402
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    |||||||  ||||||||||||||  |  ||||||| |||||  || ||||||||||||| ||||||||||| |||        |||||||||||||||||    
43507181 tccccgacaggttcgggtatccccactccatccccatccccatatcgaataattttttttaataaaaaatagaagttttttt-gcatccccaagagcaac 43507279  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||  ||| |||||||||||| |||||||||||||||||||||||||||| ||||    
43507280 gttgtaatacattatccaacaatatgctcactttaaaatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaatatga 43507379  T
200 caattatcaaataaaataacata 222  Q
    ||||||||||| |||||||||||    
43507380 caattatcaaacaaaataacata 43507402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 37579012 - 37579249
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||        ||| ||||  ||| || |    
37579012 tccccgacgggttcgggtatccctgccccatccccgtccccgcattgaataatttttttaataaaaaatagaagttttttt-gcaacccctggagaaatg 37579110  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||| | ||||| ||||||||| ||||||||||||   | | ||||||||| || |||||||||||||| || ||||||| ||||||||    
37579111 ttgtaatacattatctagcaatatgctcactttaacatttgttagatggattgatttagttgctcatttaaatatcaatgataatttttat-aacatgac 37579209  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| ||||||||||  |||| ||||||||||||    
37579210 aattatcaaacaaaataacatggcatagcaacataaagta 37579249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 44734616 - 44734463
Alignment:
87 ccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtt 186  Q
    |||||||||||||||||||||| |||||||| ||||| |||| |||| | |||||||||||  ||| ||||| ||||||||| ||||||||||| |||||    
44734616 ccccaagagcaacgttgtaatatattatccaccaatatgctcgctttaatatttgttagacgtaatgatttaattgatccttcaaatatcaatgatagtt 44734517  T
187 tttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
44734516 tttattaacatgacaattatcaaataaaataacatgacatatcaacataaagta 44734463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 101 - 240
Target Start/End: Complemental strand, 37196243 - 37196104
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||  ||| |||||||||||| |||| |||||||||||||||||||||||||||||    
37196243 ttgtaatacattatccaataatacgctcactttaacatttgttagacggaatgatttagttgatcttttatatatcaatggtagtttttattaacatgac 37196144  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    | |||||||| |||||||||||||||||||||||||||||    
37196143 agttatcaaacaaaataacataacatatcaacataaagta 37196104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 237
Target Start/End: Complemental strand, 25980234 - 25980026
Alignment:
29 catccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagct 127  Q
    ||||||| ||||| ||||||||||||||||| || |||||||| |||        ||||||||||||||||| ||||||||||||||||||||||| ||     
25980234 catccccatccccacattgaataattttttttaagaaaaaatagaagttttttg-gcatccccaagagcaacattgtaatacattatccaacaatacgca 25980136  T
128 cacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacata 227  Q
    |||||| |||||||||||||  ||| ||||| || ||||||||||||||||||  ||||||||||||||||| |||||||||| |||||||||| ||||     
25980135 cactttaacatttgttagacggaatgatttatttaatcctttaaatatcaatgtaagtttttattaacatgataattatcaaacaaaataacatgacatt 25980036  T
228 tcaacataaa 237  Q
    ||||||||||    
25980035 tcaacataaa 25980026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 38152649 - 38152834
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataa--tttttttaataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    ||||||||||||| ||||||||| ||| |||||||||||| ||||||||||   |||||||||||||||||| |||        ||||||||||||||||    
38152649 tccccgatgggtttgggtatccccgccccatccccgtcccggcattgaatatattttttttaataaaaaatagaagttatttt-gcatccccaagagcaa 38152747  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagt 185  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||  ||| ||||||||||||||||| ||||||||||||||    
38152748 cgttgtaatacatcatccaacaatacgctcactttaacatttgttagacggaatgatttagttgatcctttagatatcaatggtagt 38152834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 17885320 - 17885452
Alignment:
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatc 207  Q
    |||||||||||||||| | ||||||| ||||||| ||||   ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
17885320 acattatccaacaatatgttcactttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtagtttttattgacatgacaattatc 17885419  T
208 aaataaaataacataacatatcaacataaagta 240  Q
    ||| |||||||||| ||||||||||||||||||    
17885420 aaacaaaataacatgacatatcaacataaagta 17885452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 10072237 - 10072438
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| |||||||||||||||  || ||||||  |||||| || ||||||||||||| |||||||||| |||        ||||||||||||||||||    
10072237 tccccgacgggttcgggtatccccaccccatccctatccccgtatcgaataatttttttgataaaaaatagaagttttttt-gcatccccaagagcaacg 10072335  T
101 ttgtaa-tacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtag-tttttattaacatg 198  Q
    |||||| ||||||||||||| ||| ||||||||| ||||||||||| |  ||| |||||||||||| ||||| |||||||||||| ||||||||||||||    
10072336 ttgtaaatacattatccaacgatatgctcactttaacatttgttaggcggaatgatttagttgatcatttaattatcaatggtagttttttattaacatg 10072435  T
199 aca 201  Q
    |||    
10072436 aca 10072438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 18826214 - 18825981
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||  |||        ||| || | |||| || |    
18826214 tccccgacgggtttgggtatccc-gccccatccccgtccctgcattgaataatttttttaataaaaaattgaagttttttt-gcaacctctagagaaatg 18826117  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||| |||||| |||| ||||||||| |||||||||||||  | | ||||||||| || |||| ||||||||||||||||||| ||||| |||    
18826116 ttgtaatgcatcatccaataatatgctcactttaacatttgttagaccgattgatttagttgttcttttatatatcaatggtagttttta-taacacgac 18826018  T
201 aattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| ||||||||||  ||||||||| ||||    
18826017 aattatcaaacaaaataacatggcatatcaacgtaaa 18825981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 3227806 - 3227696
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    ||||| ||| ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||  ||| |||||||||||||||||||||||||||||    
3227806 gcatctccatgagcaacgttgtaatacattatccaacaatatgctcacttcaacatttgttagacggaatgatttagttgatcctttaaatatcaatggt 3227707  T
183 agtttttatta 193  Q
    |||||||||||    
3227706 agtttttatta 3227696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 277
Target Start/End: Original strand, 12980126 - 12980400
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttt-tttaataaaaaatata-agnnnnnnnngcatccccaagagcaacgt 101  Q
    |||| ||||||||||||||| |||  |||| | |||||||||||||||||||| |||||||||||| | | |         ||| |||| |||| || ||    
12980126 ccgacgggttcgggtatccccgcccaatcctcatccccgcattgaataattttatttaataaaaaaaaaagaagcttttttgcaacccctagagaaatgt 12980225  T
102 tgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgaca 201  Q
    |||||| ||||||||||||||| | ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| || |    
12980226 tgtaatgcattatccaacaatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagttttta-taacacgaaa 12980324  T
202 attatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||||| ||||||||||  |||||||||||||| ||         ||||||||||||||||| ||||||||||    
12980325 attatcaaacaaaataacatggcatatcaacataaaatattttttttgcatttgggacgggtttgggtatgggttc 12980400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 5376835 - 5377072
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||| ||||||| ||  ||||||  |||||||||||||||||| ||||||||||||||| |||        |||  || | ||| || |    
5376835 tccccgacgggttcgagtatccccgctccatccctctccccgcattgaataattcttttaataaaaaatagaagttttttttgcaatccta-gagaaatg 5376933  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| |||| |||||||||| ||||| ||| |||||||||| ||  | | ||||||||| |||||||||||||| |||||||||||| ||||| |||    
5376934 ttgtaatgcattgtccaacaatatgctcattttaacatttgttaaaccgattgatttagttgctcctttaaatatcattggtagttttta-taacacgac 5377032  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| ||||| |||| | ||||||||||||||||    
5377033 aattatcaaacaaaattacatgatatatcaacataaagta 5377072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 44658639 - 44658558
Alignment:
156 ttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
44658639 ttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaa 44658558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 26622701 - 26622935
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||||| |||||||  |||| ||||| |||||||||||||||| |||        ||| |||  |||| || |    
26622701 tccccgacgggttcgggtatccccgccccatcctcgtccccatattgtataatgtttttaataaaaaatagaagttttttt-gcaacccttagagaaatg 26622799  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||| | ||||| || ||| || ||||||||| ||| || | ||||| ||| ||||||||||||||||||||||||||| |||||  ||    
26622800 ttgtaatgcattatcaagcaatatgcgcacattgacatttgtttgaccaattgatttaattgctcctttaaatatcaatggtagttttta-taacacaac 26622898  T
201 aattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| ||||||||||  ||||||||||||||    
26622899 aattatcaaacaaaataacatggcatatcaacataaa 26622935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 16078762 - 16079000
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttt--taataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||  ||| |||| ||||||  |||||||||||| |||        ||| |||| |||| ||    
16078762 tccccgacgggttcgggtatccccgccccatctccgtcccca-atttaatatttttttcttaataaaaaatagaagttttttt-gcaacccctagagaaa 16078859  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
     |||||||| ||||||||||||||| | ||||||| |||||| ||||||  | | ||||||||  ||||||||||||||| ||||||||||| ||||| |    
16078860 tgttgtaattcattatccaacaatatgttcactttaacattttttagaccgattgatttagtttctcctttaaatatcaagggtagttttta-taacacg 16078958  T
199 acaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||| ||||||||||  ||||||||| |||||||    
16078959 acaattatcaaacaaaataacatggcatatcaacgtaaagta 16079000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 240
Target Start/End: Complemental strand, 39456240 - 39456119
Alignment:
119 caataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataa 218  Q
    ||||| ||||||||| |||||||||||||  ||| ||||| |||||||||  ||||||||||||| ||||||||| |||| ||||||||||| |||||||    
39456240 caatatgctcactttaacatttgttagacgtaatgatttaattgatccttccaatatcaatggtaatttttattaccatggcaattatcaaacaaaataa 39456141  T
219 cataacatatcaacataaagta 240  Q
    ||| ||||||||||||||||||    
39456140 catgacatatcaacataaagta 39456119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 41103487 - 41103640
Alignment:
87 ccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaat---atcaatggta 183  Q
    |||||| ||||||||| || |||||||| ||| |||| |  |||||| |||||||||||||  ||| ||||||||||||||||||||   ||||||||||    
41103487 ccccaacagcaacgttatagtacattattcaataatacgtccactttaacatttgttagacggaatgatttagttgatcctttaaatatcatcaatggta 41103586  T
184 gtttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
     ||| |||||||||||||||||||||| |||||||||  | |||||||||||||    
41103587 atttgtattaacatgacaattatcaaacaaaataacaagagatatcaacataaa 41103640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 16811635 - 16811717
Alignment:
158 agttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
16811635 agttgatcttttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataatatatcaacataaagta 16811717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 3920386 - 3920522
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||| |  |||| ||||| ||| |||||||||||||  | | ||||||||| ||||||||||||||||||||||||||| |||||||     
3920386 gttgtaatgcattatcaagaaatacgctcattttaacatttgttagaccgattcatttagttgttcctttaaatatcaatggtagttttta-taacatgg 3920484  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||| ||||||||||  ||||||||||||||    
3920485 caattatcaaacaaaataacatggcatatcaacataaa 3920522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 23328362 - 23328593
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttg 103  Q
    |||| ||||||||||||||| |||||||||| ||||| ||||| |||| |||||||||||||||||| |||        ||| || | |||| || ||||    
23328362 ccgacgggttcgggtatccccgcctcatccctgtccctgcattcaatattttttttaataaaaaatagaagttttttt-gcaacctctagagaaatgttg 23328460  T
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    |||| |||||||||  |||| |||||||||  ||||| ||||||  | | ||||||||  ||||||||||||||||| || |||||| || || ||||||    
23328461 taatgcattatccagtaatatgctcactttagcatttattagaccgattgatttagttattcctttaaatatcaatgataattttta-tagcacgacaat 23328559  T
204 tatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||| |||||||||  |||| ||||||||||    
23328560 tatcaaacaaaataacaagacatgtcaacataaa 23328593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 277
Target Start/End: Complemental strand, 2630809 - 2630643
Alignment:
110 attatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaa 209  Q
    |||||||||||||| | ||||||| ||||||| |||||  | | ||||||||| || |||||||||||||||||||||||| ||| | | ||||||||||    
2630809 attatccaacaatatgttcactttaacatttgatagaccgattgatttagttgctcatttaaatatcaatggtagttttta-taatacggcaattatcaa 2630711  T
210 ataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    | ||||||||||  ||||||||||||||||||        |||| |||||||||||| ||||||||||    
2630710 acaaaataacatggcatatcaacataaagtagtttttttgcattcgggacgggtttgggtatgggttc 2630643  T

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Target: chr7; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 27850660 - 27850432
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    ||||| ||||||| | ||| ||||||||||||||||||||||||||||||| |  ||||||| |||        ||| | || | || || ||| ||||     
27850660 gggtttgggtatctccgccccatccccgtccccgcattgaataattttttttaataaaaataaaagttttttt-gcaactcctatagaaatgttctaatg 27850562  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
    ||||||||||||||| ||||| ||| ||||||||||||   | | ||||||||| |||||||||||||||||  ||||||||| |||| |||||||||||    
27850561 cattatccaacaatatgctca-tttaacatttgttagatcgattgatttagttgctcctttaaatatcaatgaaagtttttat-aacacgacaattatca 27850464  T
209 aataaaataacataacatatcaacataaagta 240  Q
    || |||||||||| |||||||| | |||||||    
27850463 aacaaaataacatgacatatcatcgtaaagta 27850432  T

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Target: chr7; HSP #41
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21702428 - 21702501
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataag 74  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
21702428 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatataag 21702501  T

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Target: chr7; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 46127400 - 46127296
Alignment:
125 gctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataac 224  Q
    ||||||||| |||||||||||||  | | ||||||||| ||||||||||||||||||||||| ||| ||||| |||||| |||||| |||||||||| ||    
46127400 gctcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagttatta-taacacgacaatgatcaaacaaaataacatgac 46127302  T
225 atatca 230  Q
    ||||||    
46127301 atatca 46127296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 26004865 - 26004673
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| || |||||||||||  ||| || |||  ||||  ||||||||  |||||||||||||||||| |||        |||  ||| |||| || |    
26004865 tccccgacggattcgggtatccacgccccagccctctccctacattgaattttttttttaataaaaaatagaagttatttttgcaaaccctagagaaatg 26004766  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttatta 193  Q
    |||||||  |||||||||||||| ||||| ||| |||||||||||||  | | ||||||| | ||||||||||||||||||||||||||||||    
26004765 ttgtaattaattatccaacaatatgctcattttaacatttgttagaccgattgatttagtcgctcctttaaatatcaatggtagtttttatta 26004673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 24425246 - 24425367
Alignment:
117 aacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaat 216  Q
    ||||||| ||||||||| |||||||||||||    | ||||| ||| ||||||||||||||||||||||||||| ||||| || |||||||||| | |||    
24425246 aacaatatgctcactttaacatttgttagaccggttgatttatttg-tcctttaaatatcaatggtagttttta-taacacgataattatcaaacagaat 24425343  T
217 aacataacatatcaacataaagta 240  Q
    |||||  |||||||||||| ||||    
24425344 aacatggcatatcaacatatagta 24425367  T

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Target: chr7; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 26004663 - 26004578
Alignment:
154 atttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||| | ||||||||||||||||| |||||||||| || | ||||||||||||| ||||||||||  |||||||||||||||||    
26004663 atttagtcgctcctttaaatatcaatgatagtttttat-aagaagacaattatcaaacaaaataacatggcatatcaacataaagta 26004578  T

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Target: chr7; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46127507 - 46127437
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttt-taataaaaaata 70  Q
    |||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||    
46127507 tccccgatgggttcaggtattcccgccccatccccgtccccgcattgaataattttttgtaataaaaaata 46127437  T

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Target: chr7; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 3227108 - 3227055
Alignment:
184 gtttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
3227108 gtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaa 3227055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24752782 - 24752850
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaata 70  Q
    ||||||| |||||| |||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||    
24752782 tccccgacgggttcaggtatccctgccccatccctgtccccgcattaaat-atttttttaataaaaaata 24752850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 2632304 - 2632245
Alignment:
10 ggttcgggtatccctgcctcatccccgtccccgcattgaataattt-ttttaataaaaaa 68  Q
    |||||||||||||| ||| |||||||||||| |||||||||||||| |||||||||||||    
2632304 ggttcgggtatccccgccccatccccgtccctgcattgaataattttttttaataaaaaa 2632245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 17884981 - 17885103
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataa-tttttttaataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||| |||||||||  |||||||| | |||||| || |||||| |||||||||||||||||| |||        |||||| ||||||||||    
17884981 tccccgacgggtttgggtatccccacctcatcctcatccccgtatcgaataattttttttaataaaaaatagaag-tttttttgcatcctcaagagcaac 17885079  T
100 gttgtaatacattatccaacaata 123  Q
    ||||||  ||||||||||||||||    
17885080 gttgtataacattatccaacaata 17885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17885195 - 17885265
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataa-tttttttaataaaaaata 70  Q
    ||||||| ||||| |||||||||  |||||||||| |||||| || |||||| ||||||||||||||||||    
17885195 tccccgacgggtttgggtatccccacctcatccccatccccgtatcgaataattttttttaataaaaaata 17885265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41103392 - 41103449
Alignment:
1 tccccgatgggttcgggtatccctgcctcat-ccccgtccccgcattgaataattttt 57  Q
    ||||||||||||| |||||||||  || ||| ||||||||||||||||||||||||||    
41103392 tccccgatgggtttgggtatccccaccccattccccgtccccgcattgaataattttt 41103449  T

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Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 3920315 - 3920357
Alignment:
29 catccccgtccccgcattgaataat-ttttttaataaaaaata 70  Q
    ||||||||||||||||||||||||| | |||||||||||||||    
3920315 catccccgtccccgcattgaataatatattttaataaaaaata 3920357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 25783098 - 25783013
Alignment:
154 atttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||| ||||||||||||  ||| ||||||||| |||||   ||||||||||| ||||||| || | |||| |||||||||||    
25783098 atttagttgctcctttaaatattgatgatagttttta-taacactgcaattatcaaacaaaataatatgagatattaacataaagta 25783013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43218009 - 43218078
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat--aatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| || |||||||||||| || |||| |||||  | ||||||||||||||||    
43218009 tccccaatgggttcgggtattcccgcctcatccccgcccacgcagtgaatcaattttttttaataaaaaa 43218078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 23475659 - 23475610
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttt 58  Q
    ||||||||||||||| ||||||||| | |||||||| |||||| ||||||    
23475659 gggttcgggtatccccgcctcatcctcatccccgcagtgaatattttttt 23475610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 38152835 - 38152871
Alignment:
201 aattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| |||||||||| |||||||||||||||    
38152835 aattatcaaacaaaataacatgacatatcaacataaa 38152871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 20774376 - 20774649
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
20774376 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatataagttttttttgcatccccaagagcaacg 20774475  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
20774476 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaataaaagtttttattaacatgac 20774575  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatggg 274  Q
    |||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||    
20774576 aattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatggg 20774649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 28297677 - 28297953
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||        ||||||||||||||||||    
28297677 tccccgacgggttcgggtatccccgccccatccctgtccccgcattgaataatttttttagtaaaaaatataagttttttttgcatccccaagagcaacg 28297776  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
28297777 ttgtaatacattgtccaacaataagctcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgac 28297876  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||||||||||| |||       |||||||||||||||||| ||||||||||    
28297877 aattatcaaacaaaataacataacatatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttc 28297953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 34610818 - 34611092
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||        ||||||||||||||||||    
34610818 tccccgacgggttcgggtatccctgccccatccccgtccccacattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacg 34610916  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
34610917 ttgtaatatattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcttttaaatatcaatggtagtttttattaacatgac 34611016  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| ||||||| ||||||||||||||||||||||       |||||||||||||||||| ||||||||||    
34611017 aattatcaaacaaaataatataacatatcaacataaagtag-tattttacatttgggacgggtttgggtatgggttc 34611092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 42439987 - 42439776
Alignment:
29 catccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| |||        ||||||||| ||||||||||||||||||||||||||||||||||||    
42439987 catccccgtccccgcattgaataatttttttaataaaaaatagaagttttgtttgcatccccatgagcaacgttgtaatacattatccaacaataagctc 42439888  T
129 acttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatat 228  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
42439887 actttaacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatat 42439788  T
229 caacataaagta 240  Q
    ||||||||||||    
42439787 caacataaagta 42439776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 24710602 - 24710875
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaa-gagcaac 99  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||         |||||||||| |||||||    
24710602 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatagaa-ttttttttgcatccccaaagagcaac 24710700  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
24710701 gttgtaatacattatccaacaataagctcattttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatga 24710800  T
200 caattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggt 275  Q
    ||||||||||| ||||||||||||  |||||||||||||||        |||||||||||||||||||||||||||    
24710801 caattatcaaacaaaataacataatgtatcaacataaagta-attttttacatttgggacgggtttgagtatgggt 24710875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 29936161 - 29936435
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||| ||||||| |||||||||||||||||||||||||||||| |||        ||||| |||||||||||     
29936161 tccccgacgggttcgggtatccccgccccattcccgtcctcgcattgaataatttttttaataaaaaatagaagttttttt-gcatctccaagagcaaca 29936259  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
29936260 ttataatacattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgac 29936359  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||| ||| |||||||||| ||||||||||||||||||        |||||||||||||||||| ||||||||||    
29936360 aattataaaaaaaaataacattacatatcaacataaagta-attttttacatttgggacgggtttgggtatgggttc 29936435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 29 - 277
Target Start/End: Complemental strand, 49251090 - 49250843
Alignment:
29 catccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| |||        |||||| |||||||||||||||||||||||||||||||||||||||    
49251090 catccccgtccccgcattgaataatttttttaataaaaaatagaagttttttttgcatccacaagagcaacgttgtaatacattatccaacaataagctc 49250991  T
129 acttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatat 228  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||    
49250990 actttcacatttgttagacaaaataatttagttgatcttttaaatatcaatgatagtttttatcaacatgacaattatcaaacaaaatagcataacatat 49250891  T
229 caacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||||||       |||||||||||||||||| ||||||||||    
49250890 caacataaagtag-ttttttacatttgggacgggtttgggtatgggttc 49250843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 36187566 - 36187290
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt--aataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    |||||||||| ||||||||||||  || ||||||||||||||||||||||| |||||||  ||||||||||| |||        ||||||||||||||||    
36187566 tccccgatggattcgggtatccccaccccatccccgtccccgcattgaatattttttttttaataaaaaatagaagttttttt-gcatccccaagagcaa 36187468  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
36187467 cgttgtaatacattatccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatg 36187368  T
199 acaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||||| |||||||||||||||||||||||||| ||        |||||||||||||||||| ||||||||||    
36187367 acaattatcaaacaaaataacataacatatcaacataaaata-actttttacatttgggacgggtttgggtatgggttc 36187290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 3 - 277
Target Start/End: Complemental strand, 24237103 - 24236831
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgtt 102  Q
    ||||| |||||||||||||||  || |||| |||||||||||||||||| |||||||||||||||||| |||        |||| ||||| |||||||||    
24237103 cccgacgggttcgggtatccccaccccatcgccgtccccgcattgaata-tttttttaataaaaaatagaagttttttttgcatgcccaaaagcaacgtt 24237005  T
103 gtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaa 202  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
24237004 gtaatacattatccaacaataagtccactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaa 24236905  T
203 ttatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||| |||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||    
24236904 ttatcaaacaaaataacataacatatcaacataaaata-attttttacatttgggacgggtttgagtatgggttc 24236831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 27 - 277
Target Start/End: Original strand, 51421629 - 51421877
Alignment:
27 ctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagc 126  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||| |||||||||||    
51421629 ctcatccccgtccccgcattgaataatttttttaataaaaaatagaaggttttta-gcatcctcaagagcaacgttgtaatacattatacaacaataagc 51421727  T
127 tcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacat 226  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
51421728 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatagcaatggtagtttttattaacatggcaattatcaaacaaaataacataacat 51421827  T
227 atcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||||| ||||        |||||||||||||||||| ||||||||||    
51421828 atcaacatagagta-attttttacatttgggacgggtttgggtatgggttc 51421877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 3 - 240
Target Start/End: Complemental strand, 50426997 - 50426761
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgt 101  Q
    ||||| |||||||||||||||  |||||||||| |||||| || ||||||||||||| ||||||||||| |||        |||||||||||||||||||    
50426997 cccgacgggttcgggtatccccacctcatccccatccccgtatcgaataatttttttcaataaaaaatagaagtttttt--gcatccccaagagcaacgt 50426900  T
102 tgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgaca 201  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||||  ||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
50426899 tgtaatacattatccaacaatatgctcactttaacatttgtaagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgaca 50426800  T
202 attatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||| |||||||||| ||||||||||||||||||    
50426799 attatcaaacaaaataacatgacatatcaacataaagta 50426761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 5180800 - 5181025
Alignment:
12 ttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaataca 110  Q
    ||||||||||||  | |||||||| |||||| || ||||||||||||| ||||||||||| |||        ||||||||||||||||||||||||||||    
5180800 ttcgggtatccccacttcatccccatccccgtatcgaataattttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgttgtaataca 5180898  T
111 ttatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaa 210  Q
    ||||||||||||| ||||||||| | ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
5180899 ttatccaacaatatgctcactttaaaatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaa 5180998  T
211 taaaataacataacatatcaacataaa 237  Q
     |||||||||| |||||||||||||||    
5180999 caaaataacatgacatatcaacataaa 5181025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 240
Target Start/End: Original strand, 17134699 - 17134930
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaat 107  Q
    |||||||| ||||||  || ||||||| |||||| || ||||||||||||| ||||||||||| |||        ||||| |||||||||||||||||||    
17134699 gggttcggatatccccaccccatccccatccccgtatcgaataattttttttaataaaaaatagaagttttttt-gcatcaccaagagcaacgttgtaat 17134797  T
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatc 207  Q
    ||||||| |||||||| | ||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
17134798 acattattcaacaatatgttcactttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatc 17134897  T
208 aaataaaataacataacatatcaacataaagta 240  Q
    ||| |||||||||| ||||||||||||||||||    
17134898 aaacaaaataacatgacatatcaacataaagta 17134930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 34060364 - 34060126
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    |||| ||||||||||||||||||  || ||||||| |||||| || ||||||||||||| ||||||||||| |||        |||||||||||| ||||    
34060364 tccctgatgggttcgggtatccccaccccatccccatccccgtatcgaataattttttttaataaaaaataaaagttttttt-gcatccccaagatcaac 34060266  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
34060265 gttgtaattcattatccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggttgtttttattaacatga 34060166  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
34060165 caattatcaaacaaaataacat-acatatcaacataaagta 34060126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 45866530 - 45866291
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| || ||||||||||||  |||||||||| |||||| || ||||| ||||||| ||||||||||| |||        |||||||||||| ||||    
45866530 tccccgacggattcgggtatccccacctcatccccatccccgtatcgaatatttttttttaataaaaaatagaagttttttt-gcatccccaagatcaac 45866432  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||||||||| | ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
45866431 gttgtaatgcattatccaacaatatgttcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatga 45866332  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
     |||||||||| |||||||||| ||||||||||||||||||    
45866331 taattatcaaacaaaataacatgacatatcaacataaagta 45866291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 17092304 - 17092065
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| |||||||||||||||  |  ||||||| |||||| || ||||||||||||| ||||||||||| |||        |||||||||||||||||    
17092304 tccccgacgggttcgggtatccccactccatccccatccccgtatcgaataattttttttaataaaaaatagaagttttttt-gcatccccaagagcaac 17092206  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
     ||||||||||||||||||||||| | ||||||| |||||| |||||   ||| ||||||||||||||||||||||||||| ||||||||||||||||||    
17092205 tttgtaatacattatccaacaatatgttcactttaacatttattagatggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatga 17092106  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
17092105 caattatcaaacaaaataacatgacatatcaacataaagta 17092065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 84 - 277
Target Start/End: Original strand, 23966699 - 23966892
Alignment:
84 catccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggta 183  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||   ||| ||||||||||| |||||||||||||| |||    
23966699 catcctcaagagcaacgttgtaacacattatccaacaatatgctcactttaacatttgttagatggaatgatttagttgatactttaaatatcaatagta 23966798  T
184 gtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
23966799 gtttttataaacatgacaattatcaaacaaaataacataacatatcaacataaagtaatttttttacatttgggacgggtatgagtatgggttc 23966892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 40087802 - 40087569
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaa-taaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||| ||| |||||||||      || ||||||||||||||| ||||||||| |||        ||||||| |||||||||    
40087802 tccccgacgggttcgggtatccccgccccatccccgt------atcgaataatttttttaaataaaaaatagaagttctttt-gcatccctaagagcaac 40087710  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
     |||||||||| |||||||||||| ||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
40087709 tttgtaatacagtatccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatga 40087610  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||| |||||||||| | ||||||||||||||||    
40087609 caattatcaaacaaaataacatgatatatcaacataaagta 40087569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 23493651 - 23493497
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||    
23493651 atccccgtccccgcattgaataatttttttaataaaaaatataagttttttt-gcatccccgagagcaacgttgtaatacattatccaacaataagctca 23493553  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagt 185  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
23493552 cttccacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagt 23493497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 42708083 - 42707939
Alignment:
93 gagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttatt 192  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||||    
42708083 gagcaacgttgtaatacattatccaacaatatgctcactttaacatctgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttatt 42707984  T
193 aacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    
42707983 aacatgacaattatcaaacaaaataacatgacatatcaacataaa 42707939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 240
Target Start/End: Complemental strand, 3628300 - 3628093
Alignment:
32 ccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcact 131  Q
    |||| |||||||||  |||||||||||||||||||| || |||        |||||||||||| || | ||||||||||||||||||||||| |||||||    
3628300 ccccatccccgcatcaaataatttttttaataaaaactagaagttttttt-gcatccccaagaacagctttgtaatacattatccaacaatatgctcact 3628202  T
132 tttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaa 231  Q
    || |||||||||||||  ||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
3628201 ttaacatttgttagacgtaatgatttagttgatccgttaaatattaatggtagtttttattaacatgataattatcaaacaaaataacatgacatatcaa 3628102  T
232 cataaagta 240  Q
    |||||||||    
3628101 cataaagta 3628093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 39616046 - 39616283
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaa-tataagnnnnnnnngcatccccaagagcaa 98  Q
    ||||||| |||||||| ||||||  || ||||||| |||||| || ||||||||||||| ||||||||| || |||        ||||||||||||||||    
39616046 tccccgacgggttcggctatccccaccccatccccatccccgtatcgaataattttttttaataaaaaaatagaagctttttt-gcatccccaagagcaa 39616144  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||||||  ||| |||||  ||||| ||||||||||||||||| ||||||||||||||    
39616145 cgttgtaatacattatccaacaatatgctcactttaacatctgttagacggaatgatttaactgatcatttaaatatcaatggtaatttttattaacatg 39616244  T
199 acaattatcaaataaaataacataacatatcaacataaa 237  Q
    | ||||| |||| |||||||||| |||||||||||||||    
39616245 ataattagcaaacaaaataacatgacatatcaacataaa 39616283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 90 - 237
Target Start/End: Complemental strand, 18354336 - 18354189
Alignment:
90 caagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagttttt 189  Q
    ||||||||||||||||| | |||||||||||||| | ||||||| ||||||| |||||  ||| |||||||||||| |||||||||||||||||||||||    
18354336 caagagcaacgttgtaaaatattatccaacaatatgttcactttaacatttgatagacggaatgatttagttgatcttttaaatatcaatggtagttttt 18354237  T
190 attaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||    
18354236 attaacatgacaattatcaaacaaaataacatgacatatcaacataaa 18354189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 89 - 277
Target Start/End: Complemental strand, 19572768 - 19572582
Alignment:
89 ccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttt 188  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||  ||| ||||| ||||||||| || ||||||||||||||||    
19572768 ccaagagcaacgttgtaatacattatccaccaatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaa-tatcaatggtagtttt 19572670  T
189 tattaacatgacaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||||||| ||        ||||||||||||||| |||||||||||||    
19572669 tattaacatggcaattatcaaacaaaataacatgacatatcaacataaaata-attttttacatttgggacgggtatgagtatgggttc 19572582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 13020434 - 13020648
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatt-tttttaataaaaaa-tataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || |||          ||   |||||||||||    
13020434 cccgacgggttcgggtatccc-gcctcatccccgtccccgcattgaataattgtttttaataaaaaaataaaagtttcttttt-attttcaagagcaacg 13020531  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    || |||||||||||| |||||||  | |||||| | |||||||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
13020532 ttataatacattatcgaacaatacacccactttaatatttgttagacggaatgatttagttgatactttaaatatcaatggtagtttttattaacatgac 13020631  T
201 aattatcaaataaaata 217  Q
    |||||||||| ||||||    
13020632 aattatcaaacaaaata 13020648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 241
Target Start/End: Complemental strand, 44615791 - 44615581
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    ||||||||||||||||||||||||||||||||||||||||| |||        ||| |||| |||| ||  |||||||| |||||||||||||| | |||    
44615791 atccccgtccccgcattgaataatttttttaataaaaaatagaagttttttttgcaacccctagagaaattttgtaataaattatccaacaatatgttca 44615692  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||||||||||  | | ||||||||  ||||||||||||||||  ||||||||| ||||| ||||||||||||| ||||||||||  ||||||    
44615691 ctttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagttttta-taacacgacaattatcaaacaaaataacatggcatatc 44615593  T
230 aacataaagtag 241  Q
    || |||||||||    
44615592 aagataaagtag 44615581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 44792750 - 44792988
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| |||||||||||| ||  |  ||||||||| |||||||||||||||||||||||||| ||||| |||        ||| |||| |||| ||      
44792750 tccccgacgggttcgggtattcccactccatccccgttcccgcattgaataatttttttaataacaaatagaagttttttt-gcaacccctagagaaatt 44792848  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||| |||||||||||||| | ||||||| |||||||||||||  | | ||||||||  ||||||||||||||||  ||||||||| ||||| |||    
44792849 ttgtaataaattatccaacaatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagttttta-taacacgac 44792947  T
201 aattatcaaataaaataacataacatatcaacataaagtag 241  Q
    |||||||||| ||||||||||  |||||||| |||||||||    
44792948 aattatcaaacaaaataacatggcatatcaagataaagtag 44792988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 16408824 - 16408916
Alignment:
135 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacata 227  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
16408824 acatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacata 16408916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 29871628 - 29871394
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaa-taaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| |||||||| |||||| |||||||| | |||||| ||||||||||||||||||| || |||||| |||        ||| |||| |||| ||     
29871628 tccccgacgggttcggatatccccgcctcatctc-gtccccacattgaataatttttttaaatataaaatagaagttttttt-gcaacccctagagaaat 29871531  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| |||||| || ||||| ||||| ||| | |||||||||||  | | || |||||| ||||||||||||||||||||||||||| |||||||     
29871530 gttgtaatgcattattcagcaatatgctcattttaatatttgttagaccgattgatgtagttgctcctttaaatatcaatggtagttttta-taacatgg 29871432  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
     |||||||||| |||||||||| |||||||||||||||    
29871431 gaattatcaaacaaaataacatgacatatcaacataaa 29871394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 35937062 - 35936923
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||| | ||||| ||||||||| ||||||||||||| || | ||||||||| ||||||||||||||||||||||||||  ||||| |     
35937062 gttgtaatgcattatcgagcaatatgctcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatggtagttttt-gtaacacgg 35936964  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
     |||||||||| |||||||||| ||||||||||||||||||    
35936963 aaattatcaaacaaaataacatgacatatcaacataaagta 35936923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 49741248 - 49741112
Alignment:
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    |||| ||||||||||||||| | ||||||| |||||||||| ||  | ||||||||||| |||||||||||||||| |||||||||| |||||   ||||    
49741248 taatgcattatccaacaatatgttcactttaacatttgttaaaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacatcaat 49741150  T
204 tatcaaataaaataacataacatatcaacataaagtag 241  Q
    ||||||| ||||||||||||||||| ||||||||||||    
49741149 tatcaaacaaaataacataacatattaacataaagtag 49741112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 277
Target Start/End: Original strand, 12494767 - 12495029
Alignment:
15 gggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnn-gcatccccaagagcaacgttgtaatacatt 112  Q
    ||||||||| ||||||||||| ||| ||||||||||| ||||||| ||||||||||| |||         ||| |||  |||| ||  ||||||| ||||    
12494767 gggtatccccgcctcatccccatcctcgcattgaatatttttttttaataaaaaatagaagtttttttttgcaacccttagagaaatattgtaatgcatt 12494866  T
113 atccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaata 212  Q
    ||||||||||| | ||||||| |||||||||||||  |   ||||||||| |||||||||||||| |||||||||||| ||||| | ||||||| ||| |    
12494867 atccaacaatatgttcactttaacatttgttagaccgataaatttagttgctcctttaaatatcagtggtagttttta-taacacgccaattataaaaca 12494965  T
213 aaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||  ||| |||||||| |||||       |||||||||||||||||| ||||||||||    
12494966 aaataacatgtcatgtcaacatatagtag-ttttctacatttgggacgggtttgggtatgggttc 12495029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 9983148 - 9982996
Alignment:
87 ccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtt 186  Q
    |||| |||| || ||||||||  |||||||| ||||| ||||||||| |||||||||||||  | | ||||||||| |||||| ||||||||||||||||    
9983148 cccctagagaaatgttgtaatgtattatccagcaatatgctcactttaacatttgttagaccgattaatttagttgctcctttgaatatcaatggtagtt 9983049  T
187 tttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    || | |||||||| |||||||||| |||||||||| | |||| |||||||||||    
9983048 ttga-taacatgagaattatcaaacaaaataacatgatatattaacataaagta 9982996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 34673610 - 34673387
Alignment:
19 atccctgcctcatccccgtccccgcattgaataat-ttttttaataaaaaatataagnnnnnnnn-gcatccccaagagcaacgttgtaatacattatcc 116  Q
    ||||| ||| |||| |||||||||||||||||||| ||||||||||||||||| |||         |||  ||| | || || |||||||| |||||||     
34673610 atccccgccacatctccgtccccgcattgaataatattttttaataaaaaatagaagtttttttttgcaaaccctaaagaaatgttgtaatgcattatca 34673511  T
117 aacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaat 216  Q
    |  |||| ||||| ||| |||||||||||||    | ||||||||| ||||||||||||||||||||||||||| ||||| | ||||||||||| |||||    
34673510 agaaatacgctcattttaacatttgttagaccggttgatttagttgctcctttaaatatcaatggtagttttta-taacacggcaattatcaaacaaaat 34673412  T
217 aacataacatatcaacataaagtag 241  Q
    |||||  ||||||||||||||||||    
34673411 aacatggcatatcaacataaagtag 34673387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 16433406 - 16433270
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||| |  |||| ||||||||| | ||||||||||| || | ||||||||| ||||||||||||||||||||||||||||    |  |    
16433406 gttgtaatgcattatctagtaatatgctcactttaatatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttat----aata 16433311  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
16433310 caattatcaaacaaaataacatgacatatcaacataaagta 16433270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 163
Target Start/End: Original strand, 13390224 - 13390355
Alignment:
32 ccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcac 130  Q
    |||| ||||||||| ||||||||||||| ||||||||||| |||        ||||| | ||||||||| ||||||||||||||||||||||| ||||||    
13390224 ccccatccccgcatcgaataattttttttaataaaaaatagaagttttttt-gcatcactaagagcaactttgtaatacattatccaacaatatgctcac 13390322  T
131 ttttacatttgttagacaaaattatttagttga 163  Q
    ||| ||||||||||||| |||| ||||||||||    
13390323 tttaacatttgttagacgaaatgatttagttga 13390355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 44632380 - 44632250
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||  |||||| ||||||| | ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |||    
44632380 ttgtaatgtattatcgaacaatatgatcactttaacatttgttagacctattgatttagttgctcctttaaatatcaatgatagttttta-taacacgac 44632282  T
201 aattatcaaataaaataacataacatatcaac 232  Q
    |||| ||||| ||||||| ||  |||||||||    
44632281 aattgtcaaacaaaataatatggcatatcaac 44632250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 2514677 - 2514736
Alignment:
166 ctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacat 226  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||| ||||    
2514677 ctttaaatatcaatggtagtttttatt-acacggcaattatcaaacaaaataacatgacat 2514736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 23490926 - 23490841
Alignment:
191 ttaacatgacaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||| |||       |||||||||||||||||  ||||||||||    
23490926 ttaagatgacaattatcaaacaaaataacataacatatccacataaattag-ttttttacatttgggacgggttttggtatgggttc 23490841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 38733838 - 38733965
Alignment:
103 gtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaa 202  Q
    |||||||||||||||||||||   | ||||| ||||||  | ||| | || || | |||| | |||||||||||||||  | ||||||| ||||||||||    
38733838 gtaatacattatccaacaatatatttactttaacatttcattgaccagatgatatggttgcttctttaaatatcaatgacaatttttat-aacatgacaa 38733936  T
203 ttatcaaataaaataacataacatatcaa 231  Q
    ||||||||  |||||||||| ||||||||    
38733937 ttatcaaaccaaataacatagcatatcaa 38733965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 13390353 - 13390396
Alignment:
197 tgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
13390353 tgacaattatcaaacaaaataacatgacatatcaacataaagta 13390396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 49742249 - 49742195
Alignment:
17 gtatccctgcctcatccccgtccccgcattgaataattt-ttttaataaaaaata 70  Q
    ||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||    
49742249 gtatccccgccccatccccgtccccacattgaataattttttttaataaaaaata 49742195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 24160058 - 24159994
Alignment:
170 aaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacata 235  Q
    |||||||||||  | ||||||| || |||||||||||||||| ||||||||| |||||||||||||    
24160058 aaatatcaatgacaatttttat-aatatgacaattatcaaatcaaataacatgacatatcaacata 24159994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 13692337 - 13692395
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaa 67  Q
    |||||||||||| || |||||| |||| |||||||| || ||| |||||||||||||||    
13692337 gggttcgggtattcccgcctcaaccccatccccgcagtggatattttttttaataaaaa 13692395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 17516150 - 17516212
Alignment:
7 atgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    |||||||||||||| || | ||||| |||||||||||| ||||| |||||||||||| |||||    
17516150 atgggttcgggtattcccggctcattcccgtccccgcagtgaatcaatttttttaatgaaaaa 17516212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35937161 - 35937101
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaa 61  Q
    ||||||| ||||||||||||||| | | | |  ||||||||||||| ||||||||||||||    
35937161 tccccgacgggttcgggtatccccgacccgtatccgtccccgcattaaataatttttttaa 35937101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 3 - 277
Target Start/End: Original strand, 32302806 - 32303079
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgtt 102  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||        ||||||||||||||||||||    
32302806 cccgacgggttcgggtatccccgccccatccccgtccccgcattgaataaattttttagtaaaaaatataagttttttt-gcatccccaagagcaacgtt 32302904  T
103 gtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaa 202  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
32302905 gtaatacattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaa 32303004  T
203 ttatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||| |||||||||||||||||||||||||| |||       |||||||||||||||||| ||||||||||    
32303005 ttatcaaacaaaataacataacatatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttc 32303079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 9 - 276
Target Start/End: Complemental strand, 28977450 - 28977185
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
28977450 gggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatataagttttttt-gcatccccaagagcaacgttgtaata 28977352  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
28977351 cattatccaacaataagttcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatca 28977252  T
209 aataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggtt 276  Q
    || ||||||||||||||||||||||||||||||       |||||||||||||||||| || ||||||    
28977251 aacaaaataacataacatatcaacataaagtag-ttttttacatttgggacgggtttgggtgtgggtt 28977185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 24927693 - 24927967
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||        ||||| || |||||||||    
24927693 tccccgacgggttcgggtatccctgtctcatcctcgtccccgcattgaataatttttttaataaaaaatataagttttttt-gcatctccgagagcaacg 24927791  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
24927792 ttgtaatacattatccaacaataagcccactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgac 24927891  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||| |||||||||||       |||||||||||||||||| ||||||||||    
24927892 aattatcaaacaaaataacataacatatccacataaagtag-ttttttacatttgggacgggtttgggtatgggttc 24927967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 2076180 - 2075907
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnn-gcatccccaagagcaac 99  Q
    ||||||| |||||||| |||| | ||| |||||||||| |||||||||| || ||||||||||||||||| |||         |||||||||||||||||    
2076180 tccccgacgggttcggttatctccgccccatccccgtctccgcattgaagaacttttttaataaaaaatagaagttttttattgcatccccaagagcaac 2076081  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
2076080 gttgtaatacatcatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatga 2075981  T
200 caattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatggg 274  Q
    ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||||| |||||||    
2075980 caattatcaaacaaaataacataacatatcaacataaagta-attttttacatttgggacgggtttgggtatggg 2075907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 4231055 - 4230791
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    ||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||||| || ||         ||||||||||||||||||||||||||    
4231055 gggttcgggtatccccgccccatccctgtctccgcattgaataatttttttaataaaaattagaa-atttttttgcatccccaagagcaacgttgtaata 4230957  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
4230956 cattatccaacaataagctcacttttacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatca 4230857  T
209 aataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggt 275  Q
    || ||||||||||||  |||||||||||||||        |||||||||||||||||| ||||||||    
4230856 aacaaaataacataatgtatcaacataaagta-attttttacatttgggacgggtttgggtatgggt 4230791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 24870363 - 24870130
Alignment:
5 cgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgt 104  Q
    ||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| |||        ||||| |||||| |||||||||    
24870363 cgatgggtttgggtatcaccgcctcatcctcgtccccgcattgaataatttttttaataaaaaatagaagttatttt-gcatctccaagaccaacgttgt 24870265  T
105 aatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaatt 204  Q
    ||||||| || ||||||||  |||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
24870264 aatacatcattcaacaatacactcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtag-ttttattaacatgacaatt 24870166  T
205 atcaaataaaataacataacatatcaacataaagta 240  Q
    |||||| ||| |||||| ||||||||||||||||||    
24870165 atcaaacaaattaacatgacatatcaacataaagta 24870130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 31325011 - 31325199
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgtt 102  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||    
31325011 cccgacgggttcgggtatccccgcctcatccccgttcccgcattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgtt 31325109  T
103 gtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttatta 193  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
31325110 gtaatacattatcccacaataagctcactttcacatttgttagacaaaatgatttagttgat-ctttaaatatcaatggtagtttttatta 31325199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 32 - 240
Target Start/End: Complemental strand, 29109137 - 29108928
Alignment:
32 ccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcac 130  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||||| | ||||| ||||||    
29109137 ccccatccccgcatcgaataattttttttaataaaaaatataagttttttttgcatccccaagagcaacgttgtaatacattatctaccaatatgctcac 29109038  T
131 ttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    ||| |||||||||||||  ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||    
29109037 tttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataatatgacatatca 29108938  T
231 acataaagta 240  Q
    ||||||||||    
29108937 acataaagta 29108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 17220461 - 17220699
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt--aataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    ||||||||||||||||||  ||||||| ||| ||| ||| ||||| |||||||||||||  ||||||||||| |||        |||||||||| |||||    
17220461 tccccgatgggttcgggt--ccctgccccattcccatcctcgcatcgaataatttttttttaataaaaaatagaagttttttt-gcatccccaaaagcaa 17220557  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
    |||| |||||||||||||| ||||| ||||||||| |||||||||||||  ||| ||||| ||||||||| |||||||||||||||||||||||||||||    
17220558 cgttataatacattatccaccaatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatg 17220657  T
199 acaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
17220658 acaattatcaaacaaaataacatgacatatcaacataaagta 17220699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 45235890 - 45236044
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||    
45235890 gcatccccaagagcaatgttgtaatacattatccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggt 45235989  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
45235990 agtttttattaacatgataattatcaaacaaaataacataacatatcaacataaa 45236044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 27932180 - 27932392
Alignment:
26 cctcatccccgtccccgcattgaataattt-ttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataa 124  Q
    |||||||| | |||||  || ||||||||| ||||||||||||||| |||        ||||||||||||| ||||||||||||||||||||| ||||      
27932180 cctcatcctcatccccatatcgaataatttattttaataaaaaatagaagttttttttgcatccccaagagtaacgttgtaatacattatccaccaatgt 27932279  T
125 gctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataac 224  Q
    ||||||||| |||||||||||||  ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||    
27932280 gctcactttaacatttgttagacgtaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgac 27932379  T
225 atatcaacataaa 237  Q
    |||||||||||||    
27932380 atatcaacataaa 27932392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 39445830 - 39445680
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||| ||||| ||||| | |||||||||||||||    
39445830 gcatccccaagagcaacgttgtaatacattatccaacaatatgctcactttaacatttgttagacggaatgatttaattgat-cattaaatatcaatggt 39445732  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacat 234  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||||    
39445731 agtttttattaacatgacaattatcaaacaaaataacatgacatatctacat 39445680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 1063253 - 1063489
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt--aataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    |||||||||||||||||||||||  || |||||||    ||||||||||||||||||||  ||||||||  | |||        ||||| ||||||||||    
1063253 tccccgatgggttcgggtatccccaccccatcccc----ccgcattgaataatttttttttaataaaaatcaaaagttttttt-gcatcaccaagagcaa 1063347  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
    ||||||| |||||||| |||||||| | ||||||| |||||||||||||  ||| |||||||||||| ||||||||||||||||| ||||||| ||||||    
1063348 cgttgtagtacattattcaacaatacgttcactttaacatttgttagacggaatgatttagttgatcgtttaaatatcaatggtaatttttatcaacatg 1063447  T
199 acaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||| |||||||||  ||||||||||||||||||    
1063448 acaattatcaaacaaaataacaagacatatcaacataaagta 1063489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 11255349 - 11255114
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| |||||||||||||||   | ||||||| ||| |||||  |||||||||||| ||||||||||| |||        |||||||||||||||||    
11255349 tccccgacgggttcgggtatccccatcccatccccatccacgcatcaaataattttttttaataaaaaatagaagttttttt-gcatccccaagagcaac 11255251  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
     ||||||||||||||||||||||| | ||||||| |||||||||||||  ||| ||||||||||||||||||||    | ||||||||||||||| ||||    
11255250 attgtaatacattatccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaat---gacggtagtttttattaatatga 11255154  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||| |||||||||| ||||||||||| ||||||    
11255153 caattatcaaacaaaataacat-acatatcaacacaaagta 11255114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 9 - 241
Target Start/End: Original strand, 1012369 - 1012600
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaat 107  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| |||        ||| |||| |||| ||  |||||||    
1012369 gggttcgggtatccccgtctcatccccgtccccgcattgaataattttttttaataaaaaatagaagttttttt-gcaacccctagagaaatattgtaat 1012467  T
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatc 207  Q
      |||||||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||||||| |||||| |||||   ||||||||    
1012468 ggattatccaacaatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatggtacttttta-taacacagcaattatc 1012566  T
208 aaataaaataacataacatatcaacataaagtag 241  Q
    ||| ||||||||||  ||||||||||||||||||    
1012567 aaacaaaataacatggcatatcaacataaagtag 1012600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 17469000 - 17469238
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||        ||| || | |||| ||     
17469000 tccccgacgggttcgggtatccctgccccatccccgtccccgcattgaataattttttttaataaaaaatagaagtttttt--gcaacctctagagaaat 17469097  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
     ||||||| ||||||||||||||| | ||||||| | |||| ||||||  | | ||||||||  ||||||||||||||||||||| ||||| ||||| |     
17469098 attgtaatgcattatccaacaatatgttcactttaaaattttttagacccattgatttagtttctcctttaaatatcaatggtagctttta-taacaagg 17469196  T
200 caattatcaaataaaataacataacatatcaacataaagtag 241  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
17469197 caattatcaaacaaaataacatggcatatcaacataaagtag 17469238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 34139189 - 34139429
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattt--ttttaataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||| |||  |||||||||||||||||||         || |||| |||| ||    
34139189 tccccgatgggttcggttatccccgcctcatccacgtccccgcattgaatatttttgttttaataaaaaatataagtttttttttcaacccctagagaaa 34139288  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
     ||| |||| ||||||||||||||| | ||||||| |||||||||||||  | | ||||  ||  ||||||||||||||||||||||||||| ||||| |    
34139289 tgttataatgcattatccaacaatatgttcactttaacatttgttagaccgattgatttgtttactcctttaaatatcaatggtagttttta-taacacg 34139387  T
199 acaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||| ||||||||||    |||||||||||||||    
34139388 acaattatcaaacaaaataacatggtctatcaacataaagta 34139429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 40248605 - 40248492
Alignment:
88 cccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagttt 187  Q
    |||||||||||| |||||||||||||||||||||||  |||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||    
40248605 cccaagagcaacattgtaatacattatccaacaatattctcactttaacatttgttagactgaatgatttagttgatcctttaaatatcaatggtagttt 40248506  T
188 ttattaacatgaca 201  Q
    ||||||||||||||    
40248505 ttattaacatgaca 40248492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 34301498 - 34301367
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||    
34301498 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatagaagttttttaa-catccccaagagcaacg 34301400  T
101 ttgtaatacattatccaacaataagctcacttt 133  Q
    |||||||||||||||||||||||||||||||||    
34301399 ttgtaatacattatccaacaataagctcacttt 34301367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 34776945 - 34777045
Alignment:
137 atttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataa 236  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
34776945 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 34777044  T
237 a 237  Q
    |    
34777045 a 34777045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 34776214 - 34776349
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||        ||||||||||||||||||||||||||    
34776214 gggttcggatatccccgcctcatccccgtccccgcattgaataatttttttattaaaaaatagaagtttttta-gcatccccaagagcaacgttgtaata 34776312  T
109 cattatccaacaataagctcacttttacatttgttag 145  Q
    ||||||||||||||||| ||||||| |||||||||||    
34776313 cattatccaacaataagttcactttcacatttgttag 34776349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 24568683 - 24568921
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaa-taaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| || || |||||||| || |||||||| |||||| ||||||||||||||||||| ||||||||| |||          | |||| |||| ||     
24568683 tccccgacggatttgggtatcc-tggctcatccctgtccccacattgaataatttttttaaataaaaaatagaagtttttttgcaaccccctagagaaat 24568781  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
     || |||| ||||||||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||       
24568782 attctaatgcattatccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacat 24568880  T
200 caattatcaaataaaataacataacatatcaacataaagtag 241  Q
    ||||||||||| |||||||| | |||||||||||||||||||    
24568881 caattatcaaacaaaataac-tgacatatcaacataaagtag 24568921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 34021321 - 34021456
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| | ||||| || |||| ||||||||| ||||||||||||  || | |||| |||| |||||||||||||||| |||||||||| ||  ||||    
34021321 gttgtaatgcgttatctaataatatgctcactttaacatttgttagattaattgatttcgttgctcctttaaatatcaatagtagttttta-tataatga 34021419  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||| |||||||||| |||||||||||||||    
34021420 caattatcaaacaaaataacat-acatatcaacataaa 34021456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 35215347 - 35215467
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||| ||||||| | ||||||| |||||||||||||  | | ||||||||| ||| ||||||||||| ||||||||||| ||||| ||    
35215347 gttgtaatgcattatctaacaatatgttcactttaacatttgttagaccgattgatttagttgctccattaaatatcaagggtagttttta-taacacga 35215445  T
200 caattatcaaataaaataacat 221  Q
    ||||||||||| ||||||||||    
35215446 caattatcaaacaaaataacat 35215467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 101 - 241
Target Start/End: Complemental strand, 43113870 - 43113731
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| || ||||||||| ||   ||||||| |||||||||| ||  | | ||||||||| ||||| ||||||||||| |||||||||| |||| |||    
43113870 ttgtaatgcaatatccaacactatattcactttaacatttgttataccgattgatttagttgctccttcaaatatcaatgatagtttttat-aacacgac 43113772  T
201 aattatcaaataaaataacataacatatcaacataaagtag 241  Q
    ||||||| || ||||||||||||||||||||||| ||||||    
43113771 aattatctaacaaaataacataacatatcaacatgaagtag 43113731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 36132259 - 36132026
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    |||||||  |||||||||||| | ||| ||||| |||||||  ||||||||||||||||||||||||||| |||        ||| |||| |||  ||      
36132259 tccccgacaggttcgggtatctccgccccatcctcgtccccatattgaataatttttttaataaaaaatagaagttttttt-gcaacccctagaaaaata 36132161  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||| ||||| ||||| ||||| ||| ||||||||| |||  | | ||||| ||| | |||||||| | ||||||| |||||| ||||| | |    
36132160 ttgtaatacatcatccagcaatatgctcattttaacatttgtttgaccgattaatttaattgcttctttaaattttaatggtaattttta-taacacggc 36132062  T
201 aattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| |||||||||| |||||| ||||||||    
36132061 aattatcaaacaaaataacatgacatat-aacataaa 36132026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 237
Target Start/End: Original strand, 20399435 - 20399571
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||||| ||| | ||||||||| |||||||||||||  | | |||| |||| ||||||||||||||||| ||||||||| ||||| |||    
20399435 ttgtaatgcattatccagcaagatgctcactttaacatttgttagaccgattgatttggttggtcctttaaatatcaatgctagttttta-taacacgac 20399533  T
201 aattat-caaataaaataacataacatatcaacataaa 237  Q
    ||||||  ||| ||||||||||   |||||||||||||    
20399534 aattatataaaaaaaataacatggtatatcaacataaa 20399571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 235
Target Start/End: Original strand, 29089554 - 29089685
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||||||||||| | | ||||| | |||||||||||  | | ||||||||| ||||||||||||||||| ||| ||||| |||||  |     
29089554 ttgtaatgcattatccaacaatatgtttactttaa-atttgttagacccattaatttagttgctcctttaaatatcaatgatag-ttttaataacacaat 29089651  T
201 aattatcaaataaaataacataacatatcaacata 235  Q
    |||||||||| |||||||||| ||||| |||||||    
29089652 aattatcaaacaaaataacat-acataccaacata 29089685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 8030869 - 8030928
Alignment:
10 ggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||    
8030869 ggttcgggtattcccgcctcatccccgtccccgcactgaatcaatttttttaataaaaaa 8030928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20399380 - 20399427
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattga 48  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||    
20399380 tccccgacgggttcggttatccctgcctcatccccgtccccgcattga 20399427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 5858812 - 5858768
Alignment:
26 cctcatccccgtccccgcattgaataatttttttaataaaaaata 70  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
5858812 cctcatccccgtcctcgcattgaatattttttttaataaaaaata 5858768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 35215229 - 35215293
Alignment:
10 ggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaatataag 74  Q
    ||||||||||||||  | ||||||||||||| ||||||||| |||| |||||||||||||||||||    
35215229 ggttcgggtatccccac-tcatccccgtccctgcattgaataaattcttttaataaaaaatataag 35215293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 14186205 - 14186299
Alignment:
138 tttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| || | ||||||||  ||||||||||||||||||||||     |||||| |||  |||||||| ||||||||||  ||||| ||||||||    
14186205 tttgttagaccaattgatttagttactcctttaaatatcaatggtagt-----ttaacacgactgttatcaaacaaaataacatggcatattaacataaa 14186299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15174217 - 15174158
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aattttttt 59  Q
    ||||| |||||||||||||| || ||| |||||||||||||||| ||||| |||||||||    
15174217 tccccaatgggttcgggtattcccgccccatccccgtccccgcagtgaatcaattttttt 15174158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 8e-98; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 10 - 277
Target Start/End: Complemental strand, 44953770 - 44953505
Alignment:
10 ggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatac 109  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||    
44953770 ggttcgggtatccccgccccatcctcgtccccgcattgaataatttttttaataaaaaataaaagttttttt-gcatccgcaagagcaacgttgtaatac 44953672  T
110 attatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaa 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
44953671 attatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaa 44953572  T
210 ataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    | ||||||||||||||||||||||||||||||       |||||||||||||||||||||||| ||||    
44953571 acaaaataacataacatatcaacataaagtag-ttttttacatttgggacgggtttgagtatgagttc 44953505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 23547316 - 23547077
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
23547316 tccccgacgggttcgggtatccccgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagttttttt-gcatccccaagagcaacg 23547218  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
23547217 ttgtagtacattatccaacaataagctcactttcacatttgttaaacaaaattatttagttgatcctttaaatataaatgctagtttttattaacatgac 23547118  T
201 aattatcaaataaaataacataacatatcaacataaagtag 241  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
23547117 aattatcaaacaaaataacataacatattaacataaagtag 23547077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 44252485 - 44252765
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccg------cattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaaga 94  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||      ||||||||||||||||||||||||||||||||        ||||||||||||    
44252485 tccccgacgggttcgggtatccccgccccatccccgtccccgtccccgcattgaataatttttttaataaaaaatataagttttttt-gcatccccaaga 44252583  T
95 gcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaa 194  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
44252584 gcaatgttgtaatacattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgatagtttttattaa 44252683  T
195 catgacaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||       | |||||||||||||||| ||||||||||    
44252684 catgacaattatcaaacaaaataacataacatatcaacataaagtag-ttttttatatttgggacgggtttgggtatgggttc 44252765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 17146494 - 17146256
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||         |||||||| ||||| |||    
17146494 tccccgatgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatagaa-ttttttttgcatcccccagagcgacg 17146396  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
17146395 ttgtaatacattatccaacaataagctgactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgac 17146296  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||||||||||||||||||||||    
17146295 aattatcaaacaaaataacataacatatcaacataaagta 17146256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 29284079 - 29284354
Alignment:
1 tccccgatgggttcgggtatccctgcctc-atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||||||     
29284079 tccccgacgggttcgggtatccctgccccgacccccgtccccgcattgaataatttttttaataaaaaatataagttttttt-gcatctccaagagcaat 29284177  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
29284178 gttgtaatacattatccaacaataagctcactttcacatttgttaaacaaaattatttagttgatcttttaaatattaatggtagtttttattaacatga 29284277  T
200 caattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||||||| ||||||||||||||||||||||||||||||       |||| ||||||||||||| ||||||||||    
29284278 caattatcaaacaaaataacataacatatcaacataaagtag-ttttttacatctgggacgggtttgggtatgggttc 29284354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 44179071 - 44179344
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    |||||||  |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||    
44179071 tccccgacaggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacg 44179169  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    || |||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
44179170 tt-taatacattatccaacaatacgctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgac 44179268  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||    
44179269 aattatcaaacaaaataacataacatatcaacataaagta-attttttacatttgggacgggtttgggtatgggttc 44179344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 49579808 - 49580082
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||| |||        |||||||  |||||||||    
49579808 tccccgaagggttcgggtatccacgccccatccccgtccccgcattaaataatttttttaataaaaaatagaagtgttttt-gcatcccttagagcaacg 49579906  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
49579907 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgac 49580006  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||| |||||| |||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||||    
49580007 aatcatcaaacaaaataacataacatatcaatataaagta-attttttacatttgggacgggtttgagtatgggttc 49580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 3 - 282
Target Start/End: Original strand, 49025428 - 49025704
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgtt 102  Q
    ||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||    
49025428 cccgacgggttcgggtatccccgccccatccc-gtccccgcattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgtt 49025525  T
103 gtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaa 202  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
49025526 gtaatacattatccaataataagctcactttcacatttattagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacataacaa 49025625  T
203 ttatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttctgatg 282  Q
    |||||||| |||||||||||||||||||||| ||||||        |||||||||||||||||| |||||||||| ||||    
49025626 ttatcaaacaaaataacataacatatcaacacaaagta-attttttacatttgggacgggtttgggtatgggttcggatg 49025704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 29 - 240
Target Start/End: Original strand, 52572381 - 52572591
Alignment:
29 catccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||| |||||||||||||||    
52572381 catccccgtccccgcattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgttgtaatacattttccaacaataagctc 52572479  T
129 acttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatat 228  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
52572480 actttcacatttgttagacaaaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatat 52572579  T
229 caacataaagta 240  Q
     |||||||||||    
52572580 taacataaagta 52572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 31 - 277
Target Start/End: Complemental strand, 44107107 - 44106862
Alignment:
31 tccccgtccccgcattgaataatttttttaataaaaaa-tataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    |||||||||||||||||||||||||||||||||||||| || |||        ||||| |||||||||||||||||||||||||||||||||||| ||||    
44107107 tccccgtccccgcattgaataatttttttaataaaaaaatagaaggtttttt-gcatcaccaagagcaacgttgtaatacattatccaacaataaactca 44107009  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
44107008 ctttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatt 44106909  T
230 aacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||||        |||||||||||||||||||||||||||||    
44106908 aacataaagta-attttttacatttgggacgggtttgagtatgggttc 44106862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 30 - 276
Target Start/End: Complemental strand, 39655589 - 39655344
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaa-tataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctc 128  Q
    |||||||||| || ||||||||||||||||||||||||| || |||        |||||| |||||||||||||||||||||||||||||||||||||||    
39655589 atccccgtcctcgtattgaataatttttttaataaaaaaatagaagttttttt-gcatccgcaagagcaacgttgtaatacattatccaacaataagctc 39655491  T
129 acttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatat 228  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
39655490 actttcacatttgttagagaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatat 39655391  T
229 caacataaagtagnnnnnnnacatttgggacgggtttgagtatgggtt 276  Q
    |||||||||||||       ||||||| |||||||||| |||||||||    
39655390 caacataaagtag-ttttttacatttgagacgggtttgggtatgggtt 39655344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 43582321 - 43582560
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||        |||||||||||| |||||    
43582321 tccccgacgggttcgggtatccccgcctcatccccatccccgcatcgaataatttttttaataaaaaatagaagttttttttgcatccccaagaacaacg 43582420  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||  ||| ||||||||||||| ||||||||||||||||||||||||| ||||||     
43582421 ttgtaatacattatccaacaatatgctcactttaacatttgttagacgtaatgatttagttgatccgttaaatatcaatggtagtttttatttacatgat 43582520  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||| ||||||||| ||||||||    
43582521 aattatcaaacaaaataacatgacatatcaatataaagta 43582560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 52197896 - 52198137
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| |||||||| |||||| ||| |||||||||| |||||||||| ||||||||| ||||||||||| ||         |||||||||||||||||    
52197896 tccccgacgggttcggttatccccgccccatccccgtctccgcattgaagaattttttttaataaaaaatagaattcttttttgcatccccaagagcaac 52197995  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
52197996 gttgtaatacattatcaaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatga 52198095  T
200 caattatcaaataaaat-aacataacatatcaacataaagta 240  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||    
52198096 caattatcaaacaaaataaacatagcatatcaacgtaaagta 52198137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 7470122 - 7469848
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||| ||||||||| ||| ||||||||||| |||||||||||||||||| |  ||||||||||||         ||||    |||||||||    
7470122 tccccgacgggtttgggtatccccgccccatccccgtcctcgcattgaataattttttaataaaaaaatataagattttttc-catctttgagagcaacg 7470024  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
7470023 ttgtaatacattatcaaacaagaagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgac 7469924  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||| |||||||||||       |||||||||||||||||| ||||||||||    
7469923 aattatcaaacaaaataacataacatatccacataaagtag-tgttttacatttgggacgggtttgtgtatgggttc 7469848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 30 - 277
Target Start/End: Original strand, 39728444 - 39728689
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    |||||||||| |||||||||||||||||||||||||||||  |||        |||||||||||||||||||||||||||||||||||||||||||||||    
39728444 atccccgtcctcgcattgaataatttttttaataaaaaatcgaagttttttt-gcatccccaagagcaacgttgtaatacattatccaacaataagctca 39728542  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||  |||||||||||| |||||||||| |||||||    
39728543 ctttcacatttgttagacaaaatgatttagttaatcttttaaatatcaatgatagtttttattaacagaacaattatcaaacaaaataacattacatatc 39728642  T
230 aacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||||        |||||||||||||||||| ||||||||||    
39728643 aacataaagta-attttttacatttgggacgggtttgggtatgggttc 39728689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29842051 - 29842290
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||| | ||| ||||||  |||||| ||| |||| |||||||||||||||||| |||        ||||||| | ||||||||    
29842051 tccccgacgggttcgggtatcgccgccccatccctatccccgtatttaatattttttttaataaaaaatagaagttttttttgcatccctatgagcaacg 29842150  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
29842151 ttgtaatacattatccaacaatatgctcacttcaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgac 29842250  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||| ||| ||||||||||||||    
29842251 aattatcaaacaaaataacatgacaaatcaacataaagta 29842290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 44639019 - 44639253
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| |||||| | |||||| ||| ||||| ||||||| ||||||||| |||||||||||||||||| |||        ||||||||||||||||||    
44639019 tccccgacgggttcagatatccccgccccatcctcgtccccacattgaatattttttttaataaaaaatagaagttttttt-gcatccccaagagcaacg 44639117  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||    
44639118 ttgtaatacattatccaataataaattcactttcacatttgttagataaa-tgatttagttgatcctttaaatatcaatggtagtttttattaacatgac 44639216  T
201 aattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| ||||||||||||||||||||||||||    
44639217 aattatcaaacaaaataacataacatatcaacataaa 44639253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 83 - 277
Target Start/End: Original strand, 44172452 - 44172644
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
44172452 gcatccccaagagcaacgtt-taatacattatccaacaatacgctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggt 44172550  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||    
44172551 agtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagta-attttttacatttgggacgggtttgggtatgggttc 44172644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 10823944 - 10823799
Alignment:
95 gcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaa 194  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
10823944 gcaacgttgtaatacattatccaacaataagttcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaa 10823845  T
195 catgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
10823844 catgacaattatcaaacaaaataacataacatatcaacataaagta 10823799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 20086753 - 20086988
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| |||||||||||||||  || ||||||| |||| | || ||||||||||||| ||||||||||| |||        |||||||||||||||||    
20086753 tccccgacgggttcgggtatccccaccccatccccatccc-gtatcgaataattttttttaataaaaaatagaagttttttt-gcatccccaagagcaac 20086850  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
20086851 gttgtaatacattatccaacaatatgcccactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatga 20086950  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||  |||||||||| |||||||||||||||    
20086951 caattatcaagcaaaataacatgacatatcaacataaa 20086988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 22536180 - 22535950
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatata-agnnnnnnnngcatccccaagagcaacgttgtaa 106  Q
    |||||||||||||||  |  ||||||| |||||| || ||||||||||||| ||||||||||||| |         |||||||||| |||||  || |||    
22536180 gggttcgggtatccccactccatccccatccccgtatcgaataattttttttaataaaaaatatagaattttttttgcatccccaaaagcaatattataa 22536081  T
107 tacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattat 206  Q
    |||||||| |||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
22536080 tacattatacaacaatatgctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattat 22535981  T
207 caaataaaataacataacatatcaacataaa 237  Q
    |||| |||||||||| |||||||||||||||    
22535980 caaacaaaataacatgacatatcaacataaa 22535950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 23580574 - 23580806
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgtt 102  Q
    |||| |||||||||||||||  || ||||||| |||||| |  ||||||||||||| ||||||||||| |||        ||||||||||||||||||||    
23580574 ccgacgggttcgggtatccccaccccatccccatccccgtaacgaataattttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgtt 23580672  T
103 gtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaa 202  Q
    |||||||||||||||||||||  | |||||| |||||||||| ||  ||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
23580673 gtaatacattatccaacaatatccacactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaa 23580772  T
203 ttatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||| |||||||||| |||||||||||||||    
23580773 ttatcaaacaaaataacat-acatatcaacataaa 23580806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 34154160 - 34154432
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnn-gcatccccaagagcaa 98  Q
    ||||||| ||||||||||||||| ||||||||||| |||||  || || |||||||||| ||||||||||| |||         ||||||| ||||||||    
34154160 tccccgacgggttcgggtatccccgcctcatccccatcccct-atcgattaattttttttaataaaaaatagaagtgatcttttgcatccctaagagcaa 34154258  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
    |||||||||| |||||||||||||| | ||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
34154259 cgttgtaatatattatccaacaatatgttcactttaatatttgttagacataatgatttagttgatcctttaaatatcaatggtagtttttattaacatg 34154358  T
199 acaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||||| |||     |||||||||||||||||||||        ||||||||||||||| || ||||||||||    
34154359 acaattatcaaacaaa-----ataacatatcaacataaagtaatttttttacatttgggacgggtatgggtatgggttc 34154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 89 - 240
Target Start/End: Complemental strand, 6738651 - 6738500
Alignment:
89 ccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttt 188  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||| ||| ||||| |||||||||  ||||||||||||||||||    
6738651 ccaagagcaacgttgtaatacattatccaccaatatgctcactttaacatctgttagacataatgatttaattgatccttccaatatcaatggtagtttt 6738552  T
189 tattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
6738551 tattaacatggcaattatcaaacaaaataacatgacatatcaacataaagta 6738500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 34025703 - 34025933
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||| ||| |||||||||      || ||||||||||||| ||||||||||| |||        |||||| ||||| ||||    
34025703 tccccgacgggttcgggtatccccgccccatccccgt------atcgaataattttttttaataaaaaatagaagttttttt-gcatcctcaagaacaac 34025795  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    ||||||| |||||||||||||||| |||| |||| ||||||| ||||   ||| |||||||||||||||||||||||||||||| |||||||||||||||    
34025796 gttgtaaaacattatccaacaatatgctccctttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatga 34025895  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||| |||||||||| |||||||||||||||    
34025896 caattatcaaacaaaataacatgacatatcaacataaa 34025933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 48391079 - 48390923
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    ||||||| | || ||||| |||||||||||||||||||||| | ||||||  |||||||||||||  ||| |||||||||||| ||||||||||||||||    
48391079 gcatccctatgaacaacgctgtaatacattatccaacaatatgttcacttcaacatttgttagacggaatgatttagttgatcttttaaatatcaatggt 48390980  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
48390979 agttttt-ttaacatgacaattatcaaacaaaataacatgacatatcaacataaagta 48390923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 48306878 - 48306650
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatt-tttttaat-aaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||| |||||| |||||||| |||||||||  |||||| |||||||||||| |||||||| |||||||| |||         | | |||||| ||||||    
48306878 cccgacgggttcaggtatccccgcctcatccatgtccccacattgaataattgtttttaatgaaaaaataaaagtttttt---ctttcccaagcgcaacg 48306782  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||| ||||||| ||||||||| | |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||||||||||||    
48306781 ttgtaatacattatcgaacaatacgctcactttaatatttgttagacggaatgatttagttgatactttaaatatcaatgatagtttttattaacatgac 48306682  T
201 aattatcaaataaaataacataacatatcaac 232  Q
    |||||||||| ||| |||||| ||| ||||||    
48306681 aattatcaaacaaattaacatgacaaatcaac 48306650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 4557649 - 4557411
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||| ||||||| | ||| ||||||||||||| ||||||||||||||||| |||||||||||||||        ||| |||| | || ||     
4557649 tccccgacgggtttgggtatctccgccccatccccgtccccacattgaataattttttttaataaaaaatataagttttttt-gcaacccctaaagaaat 4557551  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
     || |||| ||||||||||||||| | ||||||| |||||||||||||  | ||||||||||| |||||||||||||||| |||||||||| |||||       
4557550 attctaatgcattatccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagttttta-taacacat 4557452  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
4557451 caattatcaaacaaaataacatgacatatcaacataaagta 4557411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 240
Target Start/End: Original strand, 19111508 - 19111716
Alignment:
29 catccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||        ||| ||||  ||| || |||||||| ||||||||||||||| | ||    
19111508 catccccgtccccgcattgaatattttttttaataaaaaatagaagttttttt-gcaacccctggagaaatgttgtaatgcattatccaacaatatgatc 19111606  T
129 acttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatat 228  Q
    ||||| |||||||||| || || | ||||||||  ||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||| ||||||    
19111607 actttaacatttgttataccaattgatttagttactcctttaaatatcaatggtagttttta-taacacgaaaattatcaaacaaaataacatgacatat 19111705  T
229 caacataaagta 240  Q
     |||||||||||    
19111706 -aacataaagta 19111716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 240
Target Start/End: Original strand, 53631653 - 53631886
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatt----tttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgt 104  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| ||    |||||||||||||||| |||        ||| |||  |||| || |||||    
53631653 gggttcgggtatccccgcctcatccacatccccgcattgaatatttgttttttttaataaaaaatagaagttttttt-gcaacccttagagaaatgttgt 53631751  T
105 aatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaatt 204  Q
    ||| ||||||||||||||| |||||||||  ||||||||||||  |   ||||||||| ||||||||||||||||||||||||||| ||||| | |||||    
53631752 aatgcattatccaacaatatgctcactttatcatttgttagaccgatcgatttagttgctcctttaaatatcaatggtagttttta-taacacggcaatt 53631850  T
205 atcaaataaaataacataacatatcaacataaagta 240  Q
    |||||| ||||||||||  |||||||||||||||||    
53631851 atcaaacaaaataacatggcatatcaacataaagta 53631886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 31127139 - 31126908
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaa-taaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||| ||| ||||| ||||| |||||||||||||||||| || ||||||||| |||        | | |||| |||| ||     
31127139 tccccgacgggttcgggtatccccgccccatcctcgtcctcgcattgaataattttttaaaataaaaaatagaagttttttt-gaaacccctagagaaat 31127041  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||| |||||||||| ||||||||| ||| | ||    
31127040 gttgtaatgcattatccaacaatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagttttta-taatacga 31126942  T
200 caattatcaaataaaataacataacatatcaaca 233  Q
    ||||||||||| ||||||||||  ||||||||||    
31126941 caattatcaaacaaaataacatggcatatcaaca 31126908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 54316890 - 54317126
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataat-ttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgtt 102  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| |||        |||  ||| | || || |||    
54316890 ccgacgggttcgggtatccccgccacatccccttccccgcattgaataatattttttaataaaaaatagaagttttgtttgcaaaccctatagaaatgtt 54316989  T
103 gtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaa 202  Q
    ||||| ||||||| |  ||||  || | ||| ||||||||||||||   | ||||||||| |||||||||||||||| |||||||||| ||||| | |||    
54316990 gtaatgcattatcaagaaatacacttattttaacatttgttagacatgttgatttagttgctcctttaaatatcaatagtagttttta-taacacggcaa 54317088  T
203 ttatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||| ||||||||||  |||||||||||||||||    
54317089 ttatcaaacaaaataacatggcatatcaacataaagta 54317126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 830765 - 830991
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||| ||||||||| ||| ||||| |||||||||||| |||| |||||||||||||||||| ||             |||| |||| || |    
830765 tccccgacgggtttgggtatccccgccacatcctcgtccccgcatttaatattttttttaataaaaaatagaaa------------cccctagagaaatg 830852  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||| ||||| |||||| || |||||| |||||| || | ||||||||  ||||| ||||||||||| ||||||||| ||| | | |    
830853 ttgtaatacattatccagcaatatgctcacgttaacattttttagaccaattgatttagtttctccttaaaatatcaatgatagttttta-taagacggc 830951  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| ||||||||||| ||||| |||||||||||    
830952 aattatcaaacaaaataacatagcatattaacataaagta 830991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 4016285 - 4016149
Alignment:
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    |||| ||||||||||||||| | ||||||| |||||||||||||  | ||||||||||| ||||||||||||| || |||||||||| |||||   ||||    
4016285 taatgcattatccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcgatagtagttttta-taacacatcaat 4016187  T
204 tatcaaataaaataacataacatatcaacataaagtag 241  Q
    ||||||| |||||||||| |||||||||||||| ||||    
4016186 tatcaaacaaaataacatgacatatcaacataaggtag 4016149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 240
Target Start/End: Original strand, 30682651 - 30682803
Alignment:
87 ccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtt 186  Q
    |||| |||| || ||||| || ||||||| | ||||| | ||||||| ||||||||||||   ||| ||||| ||| ||||||||||||||||| |||||    
30682651 cccctagaggaatgttgtgatgcattatctagcaatatgttcactttaacatttgttagaacgaatgatttaattgctcctttaaatatcaatgatagtt 30682750  T
187 tttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||    
30682751 ttta-taacatgaccattatcaaacaaaataacatgacatatcaacataaagta 30682803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 240
Target Start/End: Original strand, 42758144 - 42758356
Alignment:
31 tccccgtccccgcattgaataat-ttttttaataaaaaatataagnnnnnnnn---gcatccccaagagcaacgttgtaatacattatccaacaataagc 126  Q
    ||||||||||||||||||||||| |||||||||||||||||||||           |||  ||| |||| || |||||||| ||||||| |  |||| ||    
42758144 tccccgtccccgcattgaataatattttttaataaaaaatataagtttttttttttgcaaaccctagagaaatgttgtaatgcattatcaagaaatacgc 42758243  T
127 tcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacat 226  Q
    ||| ||| |||||||||||||    | ||||| ||| ||||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||  |||    
42758244 tcattttaacatttgttagaccggttgatttaattgctcctttaaatatcaatgatagtttttat-aacatggcaattatcaaacaaaataacatggcat 42758342  T
227 atcaacataaagta 240  Q
    ||||||||||||||    
42758343 atcaacataaagta 42758356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 23154246 - 23154170
Alignment:
163 atcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
23154246 atcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagta 23154170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 34119501 - 34119618
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||  | | ||||||||| || ||| |||||||||| ||||||||| ||||| ||    
34119501 gttgtaatgcattatccaacaatatgctcactttaacatttgttagaccgattgatttagttgctcatttcaatatcaatgttagttttta-taacacga 34119599  T
200 caattatcaaataaaataa 218  Q
    ||||||||||| |||||||    
34119600 caattatcaaacaaaataa 34119618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 41937247 - 41937107
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||||||| | ||||||||| |||||||||||||  | | ||||||||| || ||| |||||||||| |||| |||| ||||| ||    
41937247 gttgtaatgcattatccaacaacatgctcactttaacatttgttagaccgattgatttagttgttcatttcaatatcaatgttagtcttta-taacacga 41937149  T
200 caattatcaaataaaataacataacatatcaacataaagtag 241  Q
    ||||||||||| ||||||| || |||| |||||| |||||||    
41937148 caattatcaaacaaaataatatgacatgtcaacacaaagtag 41937107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 1722732 - 1722772
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaata 70  Q
    |||||||||||| ||||||||||||||||||||||||||||    
1722732 atccccgtcccctcattgaataatttttttaataaaaaata 1722772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2487515 - 2487583
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| ||  || |||||||||||||||| ||||| ||||||||||||||||||    
2487515 tccccaatgggttcgggtattcccaccacatccccgtccccgcactgaatcaatttttttaataaaaaa 2487583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 23154327 - 23154243
Alignment:
31 tccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatcc 116  Q
    ||||| |||||| || |||||||||||||||||||||||| |||        ||||||||||||||||||||||||| ||||||||    
23154327 tccccatccccgtatcgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgttgtaatgcattatcc 23154243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 14208298 - 14208377
Alignment:
154 atttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacata 235  Q
    |||| |||| |||||||||||||||||  | ||||||| ||||||||||||||||||  ||||||||||  |||||||||||    
14208298 attttgttgctcctttaaatatcaatgaca-tttttat-aacatgacaattatcaaaccaaataacatagtatatcaacata 14208377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23329905 - 23329948
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgca 44  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||    
23329905 tccccaatgggttcgggtattcctgccccatccccgtccccgca 23329948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 5e-96; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 3484267 - 3483993
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||        |||||||| |||||||||    
3484267 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaacaatttttttaataaaaaatataagttttttt-gcatccccgagagcaacg 3484169  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
3484168 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgac 3484069  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||| ||| |||||||||||||||||| |||||||||||       |||||||||||||||||| ||||||||||    
3484068 aattatgaaacaaaataacataacatatccacataaagtag-ttttttacatttgggacgggtttgggtatgggttc 3483993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 32853588 - 32853862
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||    
32853588 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaataaaaaatagaagttttttaa-catccccaagagcaacg 32853686  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |    
32853687 ttgtaatacattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatggc 32853786  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||| |||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||    
32853787 aattatcaaacaaaataacataacatatcaacataaagta-attttttacatttgggacgggtttgggtatgggttc 32853862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 2367070 - 2367308
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||        |||||||||||||||||     
2367070 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaataattttttaaataaaaaatagaagtttttta-gcatccccaagagcaaca 2367168  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
2367169 ttgtaatacattatccaacaataagctcactttaacatttgttagacaaaatgatttagtttatcctttaaatatcaatggtagtttttattaacatgac 2367268  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||||||||||| ||||||||||    
2367269 aattatcaaacaaaataacataacatatccacataaagta 2367308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 10142861 - 10142627
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| |||||| |||||||||||||||| |||||||||||||||||| |||        ||||||||||||||||||    
10142861 tccccgacgggttcgggtatccccgccccatccctgtccccgcattgaata-tttttttaataaaaaatagaagttttttt-gcatccccaagagcaacg 10142764  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
10142763 ttgtaatacattatccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgac 10142664  T
201 aattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| ||||||||||||||||||||||||||    
10142663 aattatcaaacaaaataacataacatatcaacataaa 10142627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 30 - 273
Target Start/End: Original strand, 27534457 - 27534698
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    |||||||||| ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| |||    
27534457 atccccgtcctcgcattgaataatttttttaataaaaaatataagttttttt-gcatccccaagagcaacgttgtaatacattatccaacaataagttca 27534555  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
27534556 ctttcacatttgttagacaaaattatttagttgattctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatc 27534655  T
230 aacataaagtagnnnnnnnacatttgggacgggtttgagtatgg 273  Q
    ||||||||||||       |||||||||||||||||| ||||||    
27534656 aacataaagtag-ttttttacatttgggacgggtttgggtatgg 27534698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 10188418 - 10188182
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnn-gcatccccaagagcaac 99  Q
    ||||||| | ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||  ||         |||||||||||||||||    
10188418 tccccgacgagttcgggtatccccgccccatccccgtccccgcattgaata-tttttttaataaaaaataacagtttttttttgcatccccaagagcaac 10188320  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
10188319 attgtaatacattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatga 10188220  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||| || |||||||||||| |||||||||||||    
10188219 caattatcgaacaaaataacataatatatcaacataaa 10188182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 24225447 - 24225677
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttg 103  Q
    |||| ||||||||||||||| ||| ||||| |||| |||||||||||| |||||||||||||||||| |||        ||||||||||||||||| |||    
24225447 ccgacgggttcgggtatccccgccccatcctcgtctccgcattgaata-tttttttaataaaaaatagaagttttttt-gcatccccaagagcaactttg 24225544  T
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    |||||| ||||  ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
24225545 taatac-ttatttaacaataagctgactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 24225643  T
204 tatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||| ||||||||||||||||||||||||||    
24225644 tatcaaacaaaataacataacatatcaacataaa 24225677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 30 - 277
Target Start/End: Complemental strand, 5863698 - 5863453
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    |||||||||||| ||||||||| |||||||||||||||||| |||        ||||||||||||||| |||||||||||||||||||| ||||| ||||    
5863698 atccccgtccccacattgaata-tttttttaataaaaaatagaagttttttttgcatccccaagagcatcgttgtaatacattatccaataataaactca 5863600  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
5863599 ctttcacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaaaataacataacatatc 5863500  T
230 aacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||| ||        |||||||||||||||||| ||||||||||    
5863499 aacataaaata-tttttttacatttgggacgggtttgggtatgggttc 5863453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 30 - 277
Target Start/End: Original strand, 12141159 - 12141403
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    |||||||||||||||||||||| |||||||||||||||||| |||        ||||||||||||||||||| |||||||||||| ||||||||| ||||    
12141159 atccccgtccccgcattgaata-tttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgtagtaatacattattcaacaataaactca 12141256  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||    
12141257 ctttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgttagtttttattaagatgacaattatcaaacaaaataacataacgtatc 12141356  T
230 aacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||| ||        |||||||||||||||||| ||||||||||    
12141357 aacataaaata-attttttacatttgggacgggtttgggtatgggttc 12141403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 12309329 - 12309554
Alignment:
5 cgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgt 104  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||        |||||||||||||||| |||||    
12309329 cgatggattcgggtatccccgcctcatccccgtccccgcattgaataa-ttttttaataaaaaatagaag-tttttttgcatccccaagagcaa-gttgt 12309425  T
105 aatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaatt 204  Q
    ||| ||||||| || |||| | | ||||| ||||||||||||| |||| ||||| |||  |||||||||||||||| |||       ||| |||||||||    
12309426 aattcattatcaaataatatgtttactttaacatttgttagacgaaatgatttaattgcccctttaaatatcaatgatag-------taatatgacaatt 12309518  T
205 atcaaataaaataacataacatatcaacataaagta 240  Q
    |||||| |||||||||| ||||||||||||||||||    
12309519 atcaaacaaaataacatgacatatcaacataaagta 12309554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 12678431 - 12678203
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataa--tttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaa 106  Q
    ||||||||||||||||||||||||||| |||| ||||||||||   ||||||||||||||||| ||||        ||| |||| |||| || |||||||    
12678431 gggttcgggtatccctgcctcatccccatccctgcattgaatatattttttttaataaaaaatgtaagtttttcttgcaacccctagagaaatgttgtaa 12678332  T
107 tacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattat 206  Q
    | ||||||||| ||||| ||||||||| || ||| ||||||  | | ||||||||| ||||||||||||||||| || ||||||| |||| |||||||||    
12678331 tgcattatccagcaatatgctcactttaac-tttattagaccgattgatttagttgctcctttaaatatcaatgataatttttat-aacacgacaattat 12678234  T
207 caaataaaataacataacatatcaacataaa 237  Q
    |||| |||||||||| ||||||||| |||||    
12678233 caaacaaaataacatgacatatcaatataaa 12678203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 140 - 277
Target Start/End: Original strand, 27738654 - 27738790
Alignment:
140 tgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagt 239  Q
    ||||| ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
27738654 tgttaaacataatgatttagttgctcctttaaatatcaatggtagtttttattaacatgacaattatcatacaaaataacataacatatcaacataaagt 27738753  T
240 agnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |        |||||||||||||||||| ||||||||||    
27738754 a-attttttacatttgggacgggtttgggtatgggttc 27738790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14244992 - 14245210
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||||||||||||||||||| |||||||| || || | |||||||||||||||||||||||||||||||||        ||| || | |||| ||      
14244992 tccccgatgggttcgggtatccccgcctcatctccatctctgcattgaataatttttttaataaaaaatataag-tttttttgcagccgctagagaaata 14245090  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||| | ||||| | ||||||| |||||| ||||||  ||| ||||||| | |||||||||||| |||||||||||||| ||||| |||    
14245091 ttgtaatacattatctagcaatatgttcactttaacatttattagaccgaatgatttagtcgctcctttaaatattaatggtagttttta-taacacgac 14245189  T
201 aattatcaaataaaataacat 221  Q
    |||| ||||| ||||||||||    
14245190 aattttcaaacaaaataacat 14245210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 14254704 - 14254939
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||        ||| || | || | ||      
14254704 tccccgacgggttcgggtatccctgcctcatccccgtctctgcattgaataatttttttaataaaaaatataag--ttttttgcagccgctagggaaata 14254801  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||| | ||||| | | ||||| |||||| ||||||  ||| ||||| | | ||||||||||||||||| ||||||||| |||||   |    
14254802 ttgtaatacattatctagcaatatgttgactttaacatttattagaccgaatgatttaatcgctcctttaaatatcaatgatagttttta-taacacatc 14254900  T
201 aattatcaaataaaataacataacatatcaacataaagt 239  Q
    || | ||||| |||||||||| |||||||||||||||||    
14254901 aaatttcaaacaaaataacatgacatatcaacataaagt 14254939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 100 - 277
Target Start/End: Original strand, 14505929 - 14506104
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||| |||||||||| ||||||||| ||||| ||    
14505929 gttgtaatgcattatccaacaatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagttttta-taacacga 14506027  T
200 caattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||||||| |||||||| | ||||||||||| |||||||        |||||||||||||||| |||||||||||    
14506028 caattatcaaacaaaataacgtgacatatcaacacaaagtagttttctg-catttgggacgggtttaagtatgggttc 14506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 14032400 - 14032538
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    |||||||  |||||||||||||| ||||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| |||||  ||    
14032400 ttgtaatgaattatccaacaatatgctcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagttttta-taacacaac 14032498  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||| ||||||||||||||||||    
14032499 aattatcaaacaaaataacatgacatatcaacataaagta 14032538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 32052808 - 32052988
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataattttttta-ataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaat 107  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||||  | |||||||| |||         |||||||||||||||| |||||||    
32052808 gggttccggtatccccgcctcatccccgtccccacattgaataatttttttttaaaaaaaatagaagttttttga-catccccaagagcaacattgtaat 32052906  T
108 acattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagttttt 189  Q
    ||||||||| |||||| || |||||| |||||||||||||  ||| ||||| || ||||||||||||||||||  |||||||    
32052907 acattatcctacaatacgcacactttaacatttgttagacggaatgatttatttaatcctttaaatatcaatgtaagttttt 32052988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 14411171 - 14410959
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnn--gcatccccaagagcaacgttgtaa 106  Q
    ||||| ||||||||| |||||||| | |||||||||||||||||||||||| |||||||||| |||          ||| |||| | || || |||||||    
14411171 gggtttgggtatccccgcctcatctctgtccccgcattgaataatttttttgataaaaaatagaagtatttttttagcaacccctaaagaaatgttgtaa 14411072  T
107 tacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattat 206  Q
    |  |||||||| ||||| ||||||||| |||||||||||||  | | ||||||||  ||||||||||||||||| | ||||||| ||||| |||||||||    
14411071 tgtattatccagcaatatgctcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgatggttttta-taacacgacaattat 14410973  T
207 caaataaaataaca 220  Q
    |||| |||||||||    
14410972 caaacaaaataaca 14410959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 119 - 240
Target Start/End: Complemental strand, 24603082 - 24602962
Alignment:
119 caataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataa 218  Q
    ||||| ||||||||| |||||||||||||  | | ||||||||| ||||||||||||||||||||||||||| ||||| | ||||||||||| |||||||    
24603082 caatatgctcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagttttta-taacacgtcaattatcaaacaaaataa 24602984  T
219 cataacatatcaacataaagta 240  Q
    |||  || ||||||||||||||    
24602983 catggcacatcaacataaagta 24602962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 30816029 - 30816240
Alignment:
29 catccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagct 127  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||| |||        ||| |||| |||| ||  |||||  | |||||||||||||| |      
30816029 catccccatccccgcattgaataattttttttaattaaaaatagaagttttttttgcaacccctagagaaatattgtatga-attatccaacaatatgta 30816127  T
128 cacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacata 227  Q
    |||||| |||||||||||||  | | |||||| || |||||||||| |||||||||||||||| ||||| | |||||||| || |||||||||| |||||    
30816128 cactttaacatttgttagaccgattgatttaggtgctcctttaaatgtcaatggtagttttta-taacacggcaattatccaacaaaataacatcacata 30816226  T
228 tcaacataaagtag 241  Q
    ||||||||||||||    
30816227 tcaacataaagtag 30816240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 32532417 - 32532507
Alignment:
111 ttatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgaca 201  Q
    |||||||| |||| ||||||||| |||||||||||||  ||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
32532417 ttatccaataatatgctcactttaacatttgttagacggaatgatttagttggtcctttaaatatcattggtagtttttattaacatgaca 32532507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 7394132 - 7393996
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||||||||| | ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |     
7394132 gttgtaatgcattatccaacaatatgttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacgg 7394034  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
     |||||||||| ||||||| || | ||| |||||||||    
7394033 taattatcaaacaaaataatatgatataccaacataaa 7393996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 11762190 - 11762427
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||  | ||| ||||||| |||| ||||||||| |||||||| ||||||||||| |||        ||| |||  |||| ||     
11762190 tccccgacgggttcgggtatttccgccccatccccatccc-gcattgaatgattttttttaataaaaaatagaagttctttt-gcaacccttagagaaat 11762287  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||| ||||| ||| | ||| |||  |||||||   ||| ||||||||| |||| |||||||||||||||||||||| ||||| ||    
11762288 gttgtaatgcattatccagcaatatgcttattttaacaaatgttagatccaataatttagttgctcctataaatatcaatggtagttttta-taacacga 11762386  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||  || ||||||||||  |||||||||||||||||    
11762387 caattatataacaaaataacatggcatatcaacataaagta 11762427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 32053000 - 32053070
Alignment:
170 aaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||| ||  ||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||    
32053000 aaatatcattgtaagtttttattaacatgataattatcaaacaaaataacatgacatatcaacataaagta 32053070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 18908621 - 18908683
Alignment:
7 atgggttcgggtatccctgcctcatccccgtccccgcattgaa-taatttttttaataaaaaa 68  Q
    ||||||| |||||| || ||| |||||||||||||||| |||| |||| ||||||||||||||    
18908621 atgggtttgggtattcccgccccatccccgtccccgcaatgaattaatatttttaataaaaaa 18908683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 31 - 276
Target Start/End: Complemental strand, 5909003 - 5908760
Alignment:
31 tccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcac 130  Q
    ||||| ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||    
5909003 tccccatccccgcattgaataatttttttaataaaaaatataagtttttat-gcatccccaagagcaacgttgtaatacattatccaacaataagctcac 5908905  T
131 ttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
5908904 tttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatca 5908805  T
231 acataaagtagnnnnnnnacatttgggacgggtttgagtatgggtt 276  Q
    ||||||||||        |||||||||||||||||| |||||||||    
5908804 acataaagta-attttttacatttgggacgggtttgggtatgggtt 5908760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 4 - 277
Target Start/End: Complemental strand, 22695243 - 22694972
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttg 103  Q
    |||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||    
22695243 ccgacgggttcgggtatccccgccccatccccgtcctcgcattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagagcaacgttg 22695145  T
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
22695144 taatacattatccaacaataagctcactttcacatttgttagacaaaatgatatagttgatcctttaaatatcaatggtagtttttattaacatgacaat 22695045  T
204 tatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||| |||||||||| ||||||||||||||| ||        |||||||||||||||||| ||||||||||    
22695044 tatcaaacaaaataacattacatatcaacataaaata-attttttacatttgggacgggtttgggtatgggttc 22694972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 9 - 277
Target Start/End: Original strand, 40517559 - 40517824
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    ||||||||||||||| ||| |||||| |||||||||||||||| |||||||||||||||||| |||        ||||| ||||||||||||||||||||    
40517559 gggttcgggtatccccgccccatccctgtccccgcattgaata-tttttttaataaaaaatagaagttttttt-gcatctccaagagcaacgttgtaata 40517656  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
     |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
40517657 tattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 40517756  T
209 aataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    || |||||||||||||||||||||||||| ||        || ||||||||||||||||||||||||||    
40517757 aacaaaataacataacatatcaacataaaata-attttttacctttgggacgggtttgagtatgggttc 40517824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 32 - 277
Target Start/End: Original strand, 4920601 - 4920844
Alignment:
32 ccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcact 131  Q
    ||||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||| ||||||||||||    
4920601 ccccgtccccgcattgaataatttttttaataaaaaatagaagttttttaa-catccccaagagcaacgttgtaatacattatccaataataagctcact 4920699  T
132 tttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaa 231  Q
    || |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
4920700 ttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaa 4920799  T
232 cataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||||        |||||||||||||||||| ||||||||||    
4920800 cataaagta-attttttacatttgggacgggtttgggtatgggttc 4920844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 277
Target Start/End: Complemental strand, 42987820 - 42987550
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgtt 102  Q
    ||||| ||||||||||||||  ||| ||||| |||||||||||||||||  ||||||||||||||||||||         |||||| |||||||||||||    
42987820 cccgacgggttcgggtatcctcgccccatcctcgtccccgcattgaata--ttttttaataaaaaatataa-ttttttttgcatcctcaagagcaacgtt 42987724  T
103 gtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaa 202  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
42987723 gtaatacattatccaacaataacctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaa 42987624  T
203 ttatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    |||||||| |||||||||||||||||||||||||| ||        |||||||||||||||||| ||||||||||    
42987623 ttatcaaacaaaataacataacatatcaacataaaata-attttttacatttgggacgggtttgggtatgggttc 42987550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 3565070 - 3564835
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| |||||||| ||||||  |||||||||| |||||| || |||||||||||||||||||||||| |||        |||| ||||||||||| |    
3565070 tccccgacgggttcggatatccccacctcatccccatccccgtatcgaataatttttttaataaaaaatagaagttttt---gcattcccaagagcaatg 3564974  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||||||    
3564973 ttgtaatacattatccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgac 3564874  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||| ||||||||||||||||||    
3564873 aattatcaaacaaaataacat-acatatcaacataaagta 3564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 13402348 - 13402110
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    |||||||||||||||||||||||  ||  |||||| |||||| || ||||||||||||| ||||||||||| |||        ||||||||||||||||     
13402348 tccccgatgggttcgggtatccccaccctatccccatccccgtatcgaataattttttttaataaaaaatagaagttttttt-gcatccccaagagcaat 13402250  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||    
13402249 gttgtaatacattatccaacaatatgctcattttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatagtagtttttattaacatga 13402150  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
13402149 caattatcaaacaaaataacat-acatatcaacataaagta 13402110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 30996341 - 30996578
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||        |||||||||||| |||||    
30996341 tccccgacggattcgggtatccctgccccatctccgtccccgcattgaataatttttttaataaaaaatagaagttttttt-gcatccccaagaacaacg 30996439  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    | |||||||||||| |||||||| ||||||||| ||||| |||||||  ||| ||||| ||||||||||||||||||| |||||||||||||||||||||    
30996440 tagtaatacattattcaacaatacgctcactttaacatt-gttagacggaatgatttatttgatcctttaaatatcaacggtagtttttattaacatgac 30996538  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| ||||||||||  ||||||||| |||||||    
30996539 aattatcaaacaaaataacatggcatatcaacttaaagta 30996578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 15889955 - 15890189
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    ||||||| ||||||||||||||||||| ||||||||      ||| ||||||||||||| ||||||||||| |||        |||||||||||||||||    
15889955 tccccgacgggttcgggtatccctgccccatccccg------catcgaataattttttttaataaaaaatagaagttttttttgcatccccaagagcaac 15890048  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||||||||||||| ||||| | ||||||| |||||||||||||  ||||||||| ||||||||| ||||||||||||||||||| ||||| ||||    
15890049 gttgtaatacattatccaccaatatgttcactttaacatttgttagacgtaattatttaattgatccttcaaatatcaatggtagttttcattaatatga 15890148  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||||||||||||| ||||||||||||||||||    
15890149 caattatcaaataaaataacatgacatatcaacataaagta 15890189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 240
Target Start/End: Complemental strand, 20973828 - 20973592
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatt-tttttaataaaaaa-tataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||          || |||||||||||||    
20973828 cccgacgggttcgggtatccctgccccatccccgtccccgcattgaataattgtttttaataaaaaaatataagtttttta---attcccaagagcaacg 20973732  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||| ||||||| ||||||||| | |||| ||||||  ||| ||||||||||| ||||| |||||||||||||||||||||||||||||    
20973731 ttgtaatacattatcgaacaatacgctcactttaatattttttagacggaatgatttagttgatactttacatatcaatggtagtttttattaacatgac 20973632  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||| ||| ||||||||||||||||||    
20973631 aattatcaaacaaaataccatgacatatcaacataaagta 20973592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 84 - 277
Target Start/End: Original strand, 35311649 - 35311840
Alignment:
84 catccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggta 183  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||    
35311649 catccccaagagcaacgttgtaatacattatccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggta 35311748  T
184 gtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggttc 277  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||        ||||||||||||||| |||||||||||||    
35311749 gtttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaaata-attttttacatttgggacgggtatgagtatgggttc 35311840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 10126855 - 10127053
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttg 103  Q
    |||| ||||| ||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| |||        |||||||||||| ||| ||||    
10126855 ccgacgggtttgggtatccccgcctcatcctcgtccccgcattgaata-tttttttaataaaaaatagaagttttttttgcatccccaagaccaatgttg 10126953  T
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
10126954 taatacgttatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcttttaaatatcaatggtagtttttattaacatgacaat 10127053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 17853555 - 17853399
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||    
17853555 gcatccccaagagcaacgttgtaatacattatccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggt 17853456  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
17853455 agtttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagta 17853399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 4582944 - 4583101
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    |||||| ||||||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||  ||| |||||||||||||||||||||||||||||    
4582944 gcatcctcaagagcaacgttgtaaaacattatccaacaatatgctcactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatggt 4583043  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
4583044 agtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagta 4583101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 12834921 - 12834684
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt--aataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    ||||||||||||||||||||||| ||| ||||||  ||||||||| |||||||||||||  ||||||||||| |||        ||||||||||||||||    
12834921 tccccgatgggttcgggtatccccgccccatccca-tccccgcatcgaataatttttttttaataaaaaatagaagttttttt-gcatccccaagagcaa 12834824  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
    | ||||||||||||||||| ||||| ||||||||| |||||||||||||  ||  ||||| |||||| || |||||||||||||||||||||||||||||    
12834823 cattgtaatacattatccaccaatatgctcactttaacatttgttagacgtaacgatttaattgatcattcaaatatcaatggtagtttttattaacatg 12834724  T
199 acaattatcaaataaaataacata-acatatcaacataaa 237  Q
    |||||||||||| ||||||||||| |||||||||||||||    
12834723 acaattatcaaacaaaataacatagacatatcaacataaa 12834684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 28045396 - 28045638
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaatataagnnnnnnnn-gcatccccaagagcaa 98  Q
    ||||||| |||||||||||||||  || ||||||| ||||||||| |||| || ||||||||||||||||| |||         ||||||||||||||||    
28045396 tccccgacgggttcgggtatccccaccacatccccatccccgcatcgaattaacttttttaataaaaaatagaagtttttttttgcatccccaagagcaa 28045495  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagttttta-ttaacat 197  Q
    |||| |||||||||||||||||||| | ||||||| |||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||| |||||||    
28045496 cgttataatacattatccaacaatatgttcactttaacatttgttagacgtaatgatttagttgatcctttaaatatcaatgatagtttttatttaacat 28045595  T
198 gacaattatcaaataaaataacataacatatcaacataaagta 240  Q
     |||||||| ||| |||||||||| ||||||||||||||||||    
28045596 aacaattataaaacaaaataacatgacatatcaacataaagta 28045638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 12866897 - 12866658
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaac 99  Q
    |||||||||||||||| |||||| ||| ||||||  ||||||||| ||||||||||||| ||||||||||| |||        |||||||||||||||||    
12866897 tccccgatgggttcggatatccccgccccatccca-tccccgcatcgaataattttttttaataaaaaatagaagttttttt-gcatccccaagagcaac 12866800  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
     ||||||||| ||||||| ||||| ||||||||| |||||||||||||  ||  ||||| |||||| || ||||||||||||||||||||||||||||||    
12866799 attgtaatacgttatccaccaatatgctcactttaacatttgttagacgtaacaatttaattgatcattcaaatatcaatggtagtttttattaacatga 12866700  T
200 caattatcaaataaaataacata-acatatcaacataaagta 240  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
12866699 caattatcaaacaaaataacatagacatatcaacataaagta 12866658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 6 - 240
Target Start/End: Original strand, 6369442 - 6369678
Alignment:
6 gatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaa-cgttg 103  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||||| |||        |||||||||||||||| |||||    
6369442 gatgggttcgggtatccccgcctcatccccatccccgcattaaataattttttttaataaaaaatagaagttttttttgcatccccaagagcaaacgttg 6369541  T
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    ||||||||||||||||| ||  | |||||| |||||||||||||  ||| |||||||||||| |||||| ||||| ||||||||| |||||||||| |||    
6369542 taatacattatccaacagtacacccactttaacatttgttagacggaatgatttagttgatcttttaaacatcaacggtagttttcattaacatgataat 6369641  T
204 tatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||| |||||||||  ||  ||||||||||||||    
6369642 tatcaaacaaaataacacgacgcatcaacataaagta 6369678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 27303080 - 27302842
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt--aataaaaaatataagnnnnnnnngcatccccaagagcaa 98  Q
    ||||||| ||||||||||||||| ||| ||||||  ||||||||| |||||||||||||  |||||||||||||||         |||||||||||||||    
27303080 tccccgacgggttcgggtatccccgccccatccctatccccgcatcgaataatttttttttaataaaaaatataagcttttttttcatccccaagagcaa 27302981  T
99 cgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatg 198  Q
     |||||||||||||||||||||||| | ||||||| ||||||||||||   ||| ||||||||||||||||||||||||||||||     || |||||||    
27302980 tgttgtaatacattatccaacaatatgatcactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggta---cgtagtaacatg 27302884  T
199 acaattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||||| |||||||||| |||||| |||||||||||    
27302883 acaattatcaaacaaaataacatgacatattaacataaagta 27302842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 1218582 - 1218737
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    |||||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||    
1218582 gcatccccaagagcaacgttgtaatatattattcaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggt 1218681  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||    
1218682 agttttt-ttaacatgacaattatcaaacaaaataacat-acaaatcaacataaagta 1218737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 29246215 - 29246061
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||  ||| ||||| ||||| | |||||||||||||||    
29246215 gcatccccaagaacaatgttgtaatacattatccaacaatatgctcactttaacatttgttagacggaatgatttaattgattcattaaatatcaatggt 29246116  T
183 agtttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    ||| ||||||||||| |||||||||||| |||||||||| ||||| |||||||||    
29246115 agtgtttattaacataacaattatcaaacaaaataacatgacataccaacataaa 29246061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 6156237 - 6156025
Alignment:
30 atccccgtccccgcattgaataatt-tttttaataaaaaa-tataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagct 127  Q
    ||||||||||||||||| ||||||| |||||||||||||| || |||        ||||||||||| |||||||||||||| |||||| || |||| |||    
6156237 atccccgtccccgcatttaataattctttttaataaaaaaatagaagttatttttgcatccccaagggcaacgttgtaatagattatctaaaaatatgct 6156138  T
128 cacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacata 227  Q
    |||||| |||||||||||||  ||| ||||| ||| ||||||||||||||||| || ||||||||| |||||||||||||||| ||||||||||  ||||    
6156137 cactttaacatttgttagacggaatgatttatttgctcctttaaatatcaatgatattttttattaccatgacaattatcaaacaaaataacatgtcata 6156038  T
228 tcaacataaagta 240  Q
    | |||||||||||    
6156037 taaacataaagta 6156025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 33862527 - 33862294
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||          ||| ||||||||| ||      
33862527 tccccgacgggttcgggtatccccgccccatccccgtccccgcattgaataatttttttaatgaaaaa-atagattttttttgcaaccccaagagaaata 33862429  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||||||||||| | ||||||| ||||||||||| |  | | ||||||||| || ||||||||||||| ||||||||||  ||||||||    
33862428 ttgtaatgcattatccaacaatatgttcactttaacatttgttag-cccattgatttagttggtcatttaaatatcaatcgtagttttta-caacatgac 33862331  T
201 aattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| ||||||||||  ||||||||||||||    
33862330 aattatcaaacaaaataacatggcatatcaacataaa 33862294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 6092728 - 6092625
Alignment:
137 atttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataa 236  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
6092728 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 6092629  T
237 agta 240  Q
    ||||    
6092628 agta 6092625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 38006815 - 38006579
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaa---taaaaaatataagnnnnnnnngcatccccaagagca 97  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||   ||||||||| |||        ||| ||||| ||| |    
38006815 tccccgatgggtttgggtatccccgccccatccccgtccccgcattgaataatttttttaaaaataaaaaatagaagtttttct-gcaacccca-gagaa 38006718  T
98 acgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacat 197  Q
    | |||| ||| ||||||||||||||| ||||  ||| ||| ||||||||| || | ||||||||| ||||||||||||||||||| ||||||| ||| |     
38006717 atgttgcaatgcattatccaacaatatgctcgttttaacaattgttagaccaattgatttagttgctcctttaaatatcaatggtggttttta-taatac 38006619  T
198 gacaattatcaaataaaataacataacatatcaacataaa 237  Q
    ||| ||||||||| |||||||||| |||||| ||||||||    
38006618 gactattatcaaacaaaataacatgacatattaacataaa 38006579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 3572977 - 3573203
Alignment:
9 gggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaata 108  Q
    |||||| |||||||| | | ||||| |||| ||||||||||||||| ||||||||||||||| | |        ||| |||  |||| || ||||||||     
3572977 gggttcaggtatccccgtcccatcctcgtcgccgcattgaataattgttttaataaaaaatagatgtgttttt-gcaacccatagagaaatgttgtaatg 3573075  T
109 cattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatca 208  Q
    ||||||||| ||||| ||||||||| |||||||||||||  | | ||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||    
3573076 cattatccagcaatatgctcactttaacatttgttagaccgattgatttagttgctcctttgaatatcaatggtagttttta-taacacgacaattatca 3573174  T
209 aataaaataacataacatatcaacataaa 237  Q
    || | |||||||| |||||||||||||||    
3573175 aacagaataacatgacatatcaacataaa 3573203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 6093450 - 6093307
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||        |||| |||||||||||||    
6093450 tccccgacgggttcggatatccccgcctcatccccgtccccgcattgaataatttttttattaaaaaatagaag-ttttttagcattcccaagagcaacg 6093352  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttag 145  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||    
6093351 ttgtaatacattatccaacaataagttcactttcacatgtgttag 6093307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 35194304 - 35194096
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||        ||| |||| |||| || |||||||| ||||||||| ||||| | |||    
35194304 atccccgtccccgcattgaatattttttataataaaaaatagaagttttttt-gcaacccctagagaaatgttgtaatgcattatccagcaatatgttca 35194206  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| |||||| |||||| || | |||||||| || ||||||||||||||||||||||||| |||||   ||||||||||| ||||||||||| |||||     
35194205 ctttaacattttttagaccaattgatttagtttattctttaaatatcaatggtagttttta-taacacagcaattatcaaacaaaataacatagcatatt 35194107  T
230 aacataaagta 240  Q
    |||||||||||    
35194106 aacataaagta 35194096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 12447130 - 12447364
Alignment:
5 cgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttt-tttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttg 103  Q
    ||||||||||  ||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| |||        ||| ||||  | | ||  |||    
12447130 cgatgggttcaagtatccccgccccatccccgtccccgcattgaataattttatttaataaaaaatagaagtttttt--gcaaccccttgtgaaatattg 12447227  T
104 taatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaat 203  Q
    |||| |||||||||||||||   ||||||| ||||||||||||   | | |||||  || |||||||||||||||||||||||||||| |||| ||||||    
12447228 taatgcattatccaacaatatattcactttaacatttgttagatcgattgatttaactgctcctttaaatatcaatggtagtttttat-aacacgacaat 12447326  T
204 tatcaaataaaataacataacatatcaacataaagtag 241  Q
    ||||||| |||||||||| |||||| ||||||||||||    
12447327 tatcaaacaaaataacatgacatattaacataaagtag 12447364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 37 - 237
Target Start/End: Original strand, 2984929 - 2985126
Alignment:
37 tccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttac 136  Q
    ||||||||||||||||||||||||||||||||||||||        ||| |||  |||  || ||||||||  ||||||| |||||| ||||||||| |     
2984929 tccccgcattgaataatttttttaataaaaaatataagtttttct-gcaacccttagaa-aatgttgtaatgtattatccgacaatatgctcactttaat 2985026  T
137 atttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatcaacataa 236  Q
    |||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||| ||||||||| ||||    
2985027 atttgttagaccgattgatttagttgctcctttaaatatcaatgatagttttta-taacacaacaattatcaaataaaataacatgacatatcaatataa 2985125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 27088682 - 27088462
Alignment:
15 gggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacatta 113  Q
    ||||||||| ||| ||||| | ||||||||||||||||||||||| |||||||||||||||        ||| ||   |||  ||  ||||||| |||||    
27088682 gggtatccccgccccatcctcatccccgcattgaataattttttttaataaaaaatataagatttttt-gcaacctttagaaaaattttgtaatgcatta 27088584  T
114 tccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataa 213  Q
    |||| ||||| ||| ||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||| ||    
27088583 tccagcaatatgcttactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagttttta-taacataacaattatcaaacaa 27088485  T
214 aataacataacatatcaacataaa 237  Q
    |||||||| |||||||||||||||    
27088484 aataacat-acatatcaacataaa 27088462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 30115326 - 30115462
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||  |   ||||||||| |||||||||||| |||||| ||||||| ||||| |     
30115326 gttgtaatgcattatccaacaatatgctcactttaacatttgttagactgatcgatttagttgctcctttaaatataaatggtggttttta-taacacgg 30115424  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||||||| ||||||||||| ||||||||||||||    
30115425 caattatcaaacaaaataacatagcatatcaacataaa 30115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 2413041 - 2412833
Alignment:
30 atccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctca 129  Q
    ||||||| ||||||||||||||||||||| ||||||||||   |         ||| |||| |||| || |||||| | ||||||||||||||| |||||    
2413041 atccccgcccccgcattgaataatttttt-aataaaaaattagatgttttttcgcaacccctagagaaatgttgtagtgcattatccaacaatatgctca 2412943  T
130 cttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatc 229  Q
    |||| | |||||||||||  | | ||||||||| |||||||||||||||| |||||||||| | |||  |||||||||||| |||||||||| |||||||    
2412942 ctttaatatttgttagaccgattaatttagttgctcctttaaatatcaattgtagttttta-tgacacaacaattatcaaacaaaataacatgacatatc 2412844  T
230 aacataaagta 240  Q
    || ||||||||    
2412843 aatataaagta 2412833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 8453627 - 8453500
Alignment:
91 aagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagttttta 190  Q
    |||||||| ||| |||| |||| ||||  |||| ||||| ||| ||||||||| |||  ||| ||||||||  |||||||||||||||||||| ||||||    
8453627 aagagcaatgttataatgcattctccagtaatatgctcattttaacatttgtttgaccgaatgatttagttactcctttaaatatcaatggtaattttta 8453528  T
191 ttaacatgacaattatcaaataaaataac 219  Q
     ||||||||||||||| ||| ||||||||    
8453527 -taacatgacaattattaaacaaaataac 8453500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20633903 - 20633971
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||    
20633903 tccccgatgggttcgggtattcctgcatcatccccgtccccgcagtgaatcaattttttcaataaaaaa 20633971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20650017 - 20650085
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||    
20650017 tccccgatgggttcgggtattcctgcatcatccccgtccccgcagtgaatcaattttttcaataaaaaa 20650085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 42717957 - 42717769
Alignment:
15 gggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattat 114  Q
    ||||||||| | | ||||| | |||||||||||||||| |||||||||||||||||||||          | |||| |||  || |||||||||||||||    
42717957 gggtatccccgtcacatcctcatccccgcattgaataacttttttaataaaaaatataagtttttttacta-cccctagataaatgttgtaatacattat 42717859  T
115 ccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaa 210  Q
    ||| ||||||     |||| |||||||||||||    | ||||||||  ||||||||||||||||| ||||||||| ||||| |||||||||||||    
42717858 ccagcaataa-----ctttaacatttgttagaccggttgatttagtttctcctttaaatatcaatgatagttttta-taacacgacaattatcaaa 42717769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 235
Target Start/End: Original strand, 18206793 - 18206995
Alignment:
33 cccgtccccgcattgaataatttttttaa-taaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcact 131  Q
    ||||||||||||||||||||||||||||| ||||||||  |||        ||| |||  |||| || |||||||| ||||||| |  |||| || ||||    
18206793 cccgtccccgcattgaataatttttttaaataaaaaattgaagttttttt-gcaacccttagagaaatgttgtaatgcattatctagaaatatgcccact 18206891  T
132 tttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac-aattatcaaataaaataacataacatatca 230  Q
    || | |||||||||||  | | ||||||||| |||||||||||||| | |||||||||| ||||| | | |||||| ||| ||||||||||  |||||||    
18206892 ttaatatttgttagaccgattgatttagttgctcctttaaatatcattagtagttttta-taacacggcaaattattaaacaaaataacatggcatatca 18206990  T
231 acata 235  Q
    |||||    
18206991 acata 18206995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12712871 - 12712802
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaa--taatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| ||||||||||||||||||||| | ||||  |||||||||| ||||||||    
12712871 tccccaatgggttcgggtattcctgcctcatccccgtccccgtagtgaatctaatttttttgataaaaaa 12712802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18116873 - 18116805
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaa-taatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| ||  ||||||||||||||||||| |||| |||| ||||||||||||||    
18116873 tccccaatgggttcgggtattcccacctcatccccgtccccgcagtgaattaatatttttaataaaaaa 18116805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43523481 - 43523549
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaa-taatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| ||  ||||||||||||||||||| |||| |||| ||||||||||||||    
43523481 tccccaatgggttcgggtattcccacctcatccccgtccccgcagtgaattaatatttttaataaaaaa 43523549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12235932 - 12235991
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aattttttt 59  Q
    ||||| |||||||||||||| || |||||||||||||||||||| ||||| |||||||||    
12235932 tccccaatgggttcgggtatacccgcctcatccccgtccccgcactgaatcaattttttt 12235991  T

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Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 33420494 - 33420440
Alignment:
182 tagtttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 237  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||    
33420494 tagtttttat-aacacgacaattatcaaataaaataacatgacatatcaatataaa 33420440  T

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Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23045358 - 23045290
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| || ||| ||||||| |||||||| || || ||||||||||||||||||    
23045358 tccccaatgggttcgggtattcccgccccatccccatccccgcaatggatcaatttttttaataaaaaa 23045290  T

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Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34258973 - 34259041
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| || |||||||| |||| ||||||  |||| ||||||||||||||||||    
34258973 tccccaatgggttcgggtattcccgcctcatctccgttcccgcagggaatcaatttttttaataaaaaa 34259041  T

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Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 2681096 - 2681166
Alignment:
159 gttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    ||||||||||||| ||||||||  |||| |||||  ||||||||||||||||  ||||||||| ||||||||    
2681096 gttgatcctttaactatcaatgaaagttcttattt-catgacaattatcaaaccaaataacatgacatatca 2681166  T

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Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 15564427 - 15564466
Alignment:
27 ctcatccccgtccccgcattgaataatttttttaataaaa 66  Q
    |||||||||||| || ||||||||||||||||||||||||    
15564427 ctcatccccgtctccacattgaataatttttttaataaaa 15564466  T

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Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12774135 - 12774066
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaa--taatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| || ||||||||||||||| || | ||||  |||||||||| ||||||||    
12774135 tccccaatgggttcgggtattcccgcctcatccccgtcctcgtagtgaatctaatttttttgataaaaaa 12774066  T

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Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 8453707 - 8453651
Alignment:
10 ggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaa 66  Q
    ||||||||||||||  || |||||||| |||| |||||||||||||||| | |||||    
8453707 ggttcgggtatccccaccacatccccgcccccacattgaataattttttaattaaaa 8453651  T

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Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 20634055 - 20634130
Alignment:
154 atttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    |||| |||| |||||||| ||||||||  |||| |||| | ||||||||||||||||  ||||||||| ||||||||    
20634055 atttggttgttcctttaactatcaatgaaagttcttat-atcatgacaattatcaaaccaaataacatgacatatca 20634130  T

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Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 20650169 - 20650244
Alignment:
154 atttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    |||| |||| |||||||| ||||||||  |||| |||| | ||||||||||||||||  ||||||||| ||||||||    
20650169 atttggttgttcctttaactatcaatgaaagttcttat-atcatgacaattatcaaaccaaataacatgacatatca 20650244  T

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Target: scaffold0189 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 4002 - 4275
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||| |||        |||||||||||||||| |    
4002 tccccgatgggttcgggtacccccgccccatccccgtccccgcattgaataatttttttaatgaaaaatagaagttttttt-gcatccccaagagcaa-g 4099  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||   ||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
4100 ttgtaatacattatccaacaatatgttcactttaacatttgttagatggaatgatttagttgctcctttaaatatcaatgatagtttttattaacatgac 4199  T
201 aattatcaaataaaataacataacatatcaacataaagtagnnnnnnnacatttgggacgggtttgagtatgggtt 276  Q
    |||||||||| |||||||||| ||||||||||||||||||        |||||||||||| ||||| |||||||||    
4200 aattatcaaacaaaataacatgacatatcaacataaagtattttttttacatttgggacgagtttgggtatgggtt 4275  T

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Target: scaffold1630 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 1367 - 1545
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnn-gcatccccaagagcaac 99  Q
    ||||||| ||||||||  ||||| || | ||||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||    
1367 tccccgacgggttcgg--atccccgcttaatccccgtccccgcattgaataatttttttaataaaaaatagaagtttttttttgcatccccaagagcaac 1464  T
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatg 180  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
1465 gttgtaatatattatccaacaataagctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatg 1545  T

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Target: scaffold0519 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 10046 - 10279
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| |||||||||||||||   | ||||||| ||| |||||  ||||||||||||||| ||||||| |||         ||||||||||||||||     
10046 tccccgacgggttcgggtatccccatcccatccccatccacgcatcaaataatttttttaattaaaaatagaagctttttc--catccccaagagcaaca 10143  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||  ||| ||||||||||||||||||||    | ||||||||||||||| |||||    
10144 ttgtaatacattatccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaat---gacggtagtttttattaatatgac 10240  T
201 aattatcaaataaaataacataacatatcaacataaagta 240  Q
    |||||||||| |||||||||| ||||||||||| ||||||    
10241 aattatcaaacaaaataacat-acatatcaacacaaagta 10279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 32792 - 32668
Alignment:
83 gcatccccaagagcaacgttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggt 182  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||| ||||| ||||| | |||||||||| ||||    
32792 gcatccccaagagcaacgttgtaatacattatccaacaatatgctcactttaacatttgttagacggaatgatttaattgat-cattaaatatcactggt 32694  T
183 agtttttattaacatgacaattatca 208  Q
    ||||||||||| |||||| |||||||    
32693 agtttttattaccatgaccattatca 32668  T

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Target: scaffold0007 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 240
Target Start/End: Complemental strand, 197639 - 197433
Alignment:
32 ccccgtccccgcattgaataa-tttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgtaatacattatccaacaataagctcac 130  Q
    ||||||||||||||||||||| |||||||||||||||||| |||        ||| |||| |||| |||||| |||| ||||||||| ||| | ||||||    
197639 ccccgtccccgcattgaataaatttttttaataaaaaatagaagtttttt--gcaacccctagagaaacgttataatgcattatccagcaaaatgctcac 197542  T
131 ttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaataaaataacataacatatca 230  Q
    ||| | |||||||||||  | | ||||||||| ||||||||||||||||||||||||||| ||||| |  |||||||||| ||||||||||  |||||||    
197541 tttaatatttgttagaccgattgatttagttgctcctttaaatatcaatggtagttttta-taacaaggtaattatcaaacaaaataacatggcatatca 197443  T
231 acataaagta 240  Q
    ||||||||||    
197442 acataaagta 197433  T

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Target: scaffold0014 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 14487 - 14290
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaatataagnnnnnnnngcatccccaagagcaacgt 101  Q
    ||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||| |||        ||| |||| |||| ||  |    
14487 cccgacgggttcgggtatccccgccccatccccgtcctcgcattgaataattttttttaataaaaaatagaagttttttt-gcaacccctagagaaatat 14389  T
102 tgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgaca 201  Q
    ||||||  |||||||||||||| | ||||||| |||||||||||||  | | ||||| ||| ||||||||||||||||||||||||||| ||||||||||    
14388 tgtaatgaattatccaacaatatgttcactttaacatttgttagaccgattgatttaattgttcctttaaatatcaatggtagttttta-taacatgaca 14290  T

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Target: scaffold0294 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 14525 - 14751
Alignment:
5 cgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacgttgt 104  Q
    ||||||||| | |||||||| || ||||||||||||||||| |||||||||||||||||||||||| |||        ||| ||| |  |  || |||||    
14525 cgatgggtttgagtatccctaccccatccccgtccccgcatcgaataatttttttaataaaaaatagaagctttttt-gcaaccctataaa-aatgttgt 14622  T
105 aatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaatt 204  Q
    ||| ||||||||| ||||| ||||||||| |||||||||| ||  | | ||||||||| |||||||||||||||||||||||||||  ||||  | ||||    
14623 aatgcattatccagcaatatgctcactttaacatttgttaaaccgattgatttagttgctcctttaaatatcaatggtagttttta-caacacaataatt 14721  T
205 atcaaataaaataacataacatatcaacat 234  Q
    |||||| ||||||| ||| |||||||||||    
14722 atcaaacaaaataatatatcatatcaacat 14751  T

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Target: scaffold0036 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 33139 - 33376
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataatttttttaataaaaaatataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||||| || ||||||||||||  || ||||||| ||||||||||||||||||||||||||||||| || |||        ||| |||  |||| ||      
33139 tccccgacggattcgggtatccccaccacatccccatccccgcattgaataatttttttaataaaaa-tagaagttttttt-gcaacccgtagagaaata 33236  T
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||||||||||| | | ||||| ||| |||||||||  | | ||||||||| |||||||||||||||| |||||||||| |||||  ||    
33237 ttgtaatgcattatccaacaatatgtttactttaacaattgttagaccgattgatttagttgttcctttaaatatcaatcgtagttttta-taacacaac 33335  T
201 aattatcaaataaaataacataacatatcaacataaagtag 241  Q
    ||||| |||| ||||||||||  ||| ||||||||||||||    
33336 aattaccaaacaaaataacatggcatgtcaacataaagtag 33376  T

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Target: scaffold0135 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 228
Target Start/End: Original strand, 35900 - 36128
Alignment:
3 cccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattttttt-aataaaaaa-tataagnnnnnnnngcatccccaagagcaacg 100  Q
    ||||| |||||||||||| || || ||||| || ||||||||||||||||||||||| ||||||||| ||||||        ||| |||| |||| || |    
35900 cccgacgggttcgggtattcccgcttcatctccatccccgcattgaataatttttttgaataaaaaaatataagttttatt-gcaacccctagagaaatg 35998  T
101 ttgtaatacattatccaacaataagctcactttta-catttgttagacaaaattatttagttgat--cctttaaatatcaatggtagtttttattaacat 197  Q
     ||||||  |||||||||||||| | ||||||||| ||||||||||||  | | ||||||||| |  |||||||||||||||||||||||||| |||||     
35999 atgtaatgtattatccaacaatatgttcacttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagttttta-taacac 36097  T
198 gacaattatcaaataaaataacataacatat 228  Q
    |||| |||||||| |||||||||| ||||||    
36098 gacagttatcaaacaaaataacatgacatat 36128  T

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Target: scaffold0027 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 6249 - 6388
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||| ||||| | ||||||| ||||||||||||   | | ||||||||| |||||||||| ||||||||| |||||| || || ||    
6249 gttgtaatgcattatccagcaatatgttcactttaacatttgttagatcgattgatttagttgctcctttaaatttcaatggtaattttta-tagcacga 6347  T
200 caattatcaaataaaataacataacatatcaacataaagta 240  Q
    ||| ||||||| ||||||||||  |||||||||||||||||    
6348 caactatcaaacaaaataacatggcatatcaacataaagta 6388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 33427 - 33543
Alignment:
101 ttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgac 200  Q
    ||||||| ||||||||||||||| | ||||||| | |||||||| ||  | | ||||| ||| | ||||||||||||||||||||||||| ||||| ||     
33427 ttgtaatgcattatccaacaatatgttcactttaatatttgttacaccgactgatttaattgcttctttaaatatcaatggtagttttta-taacacgaa 33525  T
201 aattatcaaataaaataa 218  Q
    ||||||||||| ||||||    
33526 aattatcaaatcaaataa 33543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33327 - 33398
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaata--atttttttaataaaaaata 70  Q
    ||||||| ||||||||||||||| ||  |||||||||||| ||||||||||   ||||||||||||||||||    
33327 tccccgacgggttcgggtatccccgctccatccccgtccctgcattgaatagtttttttttaataaaaaata 33398  T

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Target: scaffold0022 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 90440 - 90576
Alignment:
100 gttgtaatacattatccaacaataagctcacttttacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatga 199  Q
    |||||||| ||||||||| |||||  |||||||| | |||||||||||  | | ||||| ||| ||||||||||||||||||| | ||||| |||||       
90440 gttgtaatgcattatccagcaatatactcactttaatatttgttagaccgattgatttatttgctcctttaaatatcaatggttg-ttttaataacacat 90538  T
200 caattatcaaataaaataacataacatatcaacataaa 237  Q
    ||||||| ||| ||||||||||  ||||||||||||||    
90539 caattattaaacaaaataacatggcatatcaacataaa 90576  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 56263 - 56195
Alignment:
1 tccccgatgggttcgggtatccctgcctcatccccgtccccgcattgaat-aatttttttaataaaaaa 68  Q
    ||||| |||||||||||||| || |||  ||||||||||||||| ||||| ||||| ||||||||||||    
56263 tccccaatgggttcgggtattcccgcccaatccccgtccccgcagtgaatcaatttatttaataaaaaa 56195  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 67476 - 67540
Alignment:
7 atgggttcgggtatccctgcctcatccccgtccccgcattgaataa---tttttttaataaaaaa 68  Q
    |||||||||||||  || |||||||||||||||||||| ||||| |   ||||||||||||||||    
67476 atgggttcgggtaaacccgcctcatccccgtccccgcagtgaatcaatttttttttaataaaaaa 67540  T

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Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 75319 - 75383
Alignment:
7 atgggttcgggtatccctgcctcatccccgtccccgcattgaataa---tttttttaataaaaaa 68  Q
    |||||||||||||  || |||||||||||||||||||| ||||| |   ||||||||||||||||    
75319 atgggttcgggtaaacccgcctcatccccgtccccgcagtgaatcaatttttttttaataaaaaa 75383  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 21083 - 21018
Alignment:
4 ccgatgggttcgggtatccctgcctcatccccgtccccgcattgaataattt-ttttaataaaaaa 68  Q
    |||||| ||||||||||||| | ||||||||| ||||  || |||||||||| |||||||||||||    
21083 ccgatgagttcgggtatccccgactcatccccatccctacaatgaataatttattttaataaaaaa 21018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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