View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0641_low_56 (Length: 283)
Name: NF0641_low_56
Description: NF0641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0641_low_56 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 39 - 267
Target Start/End: Original strand, 41362199 - 41362427
Alignment:
| Q |
39 |
taaatatgtattgagcgggagtgagttcgaatcattagtgtaaaataattgtgaagaacgaggaattcgtattttccacaattcatttgagactcactac |
138 |
Q |
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| T |
41362199 |
taaatatgtattgagcgggagtgagttcgaatcattagtgtaaaataattgtgaagaacgaggaattcgtattttccacaattcatttgagactcactac |
41362298 |
T |
|
| Q |
139 |
aatagttgtaggcttttgaagaataatgaaattaatgtgcaaactttaaagtatgaagataaaataggaaatagaaacattattaactttaaataatagc |
238 |
Q |
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| T |
41362299 |
aatagttgtaggcttttgaagaataatgaaattaatgtgcaaactttaaagtatgaagataaaataggaaatagaaacattattaactttaaataatagc |
41362398 |
T |
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| Q |
239 |
atgatgcgtagcaacacaagtaatagcaa |
267 |
Q |
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| T |
41362399 |
atgatgcgtagcaacacaagtaatagcaa |
41362427 |
T |
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