View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0642_high_9 (Length: 336)
Name: NF0642_high_9
Description: NF0642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0642_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 29 - 325
Target Start/End: Complemental strand, 9422744 - 9422454
Alignment:
| Q |
29 |
aaaatataatatattaaaaactaacaatctaagcacacaagatgccaagatgaattacaaaattattaagtacaaaaacagcaacgatgcatctacattc |
128 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||| | ||||| ||||||||||| |
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| T |
9422744 |
aaaatataatatattaaaaactaacaatctaagcacacaagatgccaagatgaattacaaaaaac---agcactaaaaga---acgattcatctacattc |
9422651 |
T |
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| Q |
129 |
attttgaatataaagtcactcataaacatctgagtgattgattactcgattgatagaaattatatgaaattttcttaaccttgaacttaatccaagtcca |
228 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |
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| T |
9422650 |
attttacatataaagtcactcataaacatctgagtgattgattactcgattgatagaaattatatgaaatttttttaaccttggacttaatccaagtcca |
9422551 |
T |
|
| Q |
229 |
aaccaaaaatttgtccatatctaaaaatgtgcgagtcaaataatcttgattaccaaagactgtataattccgatgcttctaaatcgatcaaattcat |
325 |
Q |
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||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
9422550 |
aaccaaaaatttgtccatatctaaaaatgtgtgaatcaaataatcttgattaccaaagaccgtataattccgatgcttctaaatcgatcaaattcat |
9422454 |
T |
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