View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0644_low_1 (Length: 374)

Name: NF0644_low_1
Description: NF0644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0644_low_1
NF0644_low_1
[»] chr7 (43 HSPs)
chr7 (8-232)||(1655107-1655331)
chr7 (248-358)||(36208173-36208283)
chr7 (248-353)||(22343361-22343466)
chr7 (248-353)||(41915741-41915846)
chr7 (248-358)||(7389389-7389499)
chr7 (248-358)||(19329842-19329952)
chr7 (248-361)||(3434562-3434675)
chr7 (253-358)||(3784000-3784105)
chr7 (248-353)||(38044197-38044302)
chr7 (246-352)||(4999510-4999616)
chr7 (248-358)||(8080373-8080483)
chr7 (248-353)||(8238212-8238318)
chr7 (248-358)||(38267040-38267150)
chr7 (248-353)||(7727906-7728011)
chr7 (249-366)||(35522877-35522994)
chr7 (248-357)||(36361904-36362013)
chr7 (248-358)||(38837217-38837327)
chr7 (248-358)||(18207180-18207289)
chr7 (248-358)||(35137533-35137643)
chr7 (253-358)||(3694372-3694477)
chr7 (248-357)||(19436178-19436287)
chr7 (248-353)||(32564421-32564526)
chr7 (248-357)||(36362026-36362135)
chr7 (248-358)||(10343553-10343663)
chr7 (247-353)||(40846108-40846214)
chr7 (248-358)||(41423682-41423792)
chr7 (248-355)||(12310906-12311011)
chr7 (248-355)||(35468848-35468955)
chr7 (248-343)||(46374807-46374902)
chr7 (248-358)||(21234401-21234511)
chr7 (248-358)||(39255914-39256023)
chr7 (248-358)||(40957707-40957817)
chr7 (253-358)||(2318233-2318338)
chr7 (248-358)||(26296644-26296754)
chr7 (248-358)||(46033791-46033901)
chr7 (253-358)||(32951483-32951588)
chr7 (248-304)||(31735884-31735940)
chr7 (248-358)||(11044188-11044288)
chr7 (289-358)||(27744299-27744368)
chr7 (278-360)||(16374812-16374894)
chr7 (254-318)||(31513410-31513473)
chr7 (274-318)||(40237042-40237085)
chr7 (254-318)||(43317566-43317629)
[»] chr2 (39 HSPs)
chr2 (248-357)||(26891495-26891604)
chr2 (248-358)||(9058480-9058590)
chr2 (248-358)||(10249372-10249482)
chr2 (248-358)||(33436090-33436200)
chr2 (253-352)||(28863460-28863559)
chr2 (248-358)||(17819994-17820104)
chr2 (248-358)||(32505638-32505748)
chr2 (247-353)||(38732353-38732459)
chr2 (248-358)||(40613892-40614002)
chr2 (248-358)||(40701478-40701588)
chr2 (253-358)||(19930810-19930915)
chr2 (248-353)||(43490121-43490226)
chr2 (254-358)||(3439985-3440089)
chr2 (247-358)||(17473019-17473130)
chr2 (248-366)||(7465717-7465835)
chr2 (248-358)||(13438343-13438453)
chr2 (248-358)||(28381645-28381755)
chr2 (248-353)||(45097730-45097835)
chr2 (266-353)||(2997482-2997569)
chr2 (248-355)||(33436211-33436318)
chr2 (248-358)||(30915463-30915573)
chr2 (248-357)||(5574479-5574588)
chr2 (291-358)||(3737986-3738053)
chr2 (248-358)||(20700815-20700925)
chr2 (248-358)||(42257193-42257303)
chr2 (248-353)||(27864704-27864809)
chr2 (248-353)||(13365351-13365458)
chr2 (248-358)||(4060685-4060795)
chr2 (253-358)||(41575142-41575248)
chr2 (248-358)||(15428730-15428840)
chr2 (248-358)||(38273132-38273242)
chr2 (248-330)||(38882832-38882913)
chr2 (248-358)||(36168836-36168946)
chr2 (248-352)||(2533124-2533227)
chr2 (298-353)||(3034978-3035033)
chr2 (248-313)||(17823784-17823849)
chr2 (274-318)||(11825588-11825631)
chr2 (274-318)||(34895675-34895718)
chr2 (254-318)||(43114680-43114743)
[»] chr1 (38 HSPs)
chr1 (248-353)||(5958995-5959100)
chr1 (248-353)||(50590995-50591100)
chr1 (248-358)||(2581915-2582025)
chr1 (248-358)||(8346378-8346488)
chr1 (248-358)||(9474866-9474976)
chr1 (248-358)||(27564725-27564835)
chr1 (248-358)||(32813247-32813357)
chr1 (248-358)||(3000319-3000429)
chr1 (248-358)||(38632311-38632421)
chr1 (248-353)||(41608488-41608593)
chr1 (249-358)||(44453980-44454089)
chr1 (253-366)||(44548358-44548471)
chr1 (248-352)||(48716278-48716382)
chr1 (248-358)||(38595154-38595264)
chr1 (248-358)||(47452310-47452420)
chr1 (248-358)||(51898673-51898783)
chr1 (248-358)||(50630458-50630568)
chr1 (248-358)||(6260870-6260980)
chr1 (248-357)||(45044551-45044660)
chr1 (248-353)||(47748443-47748547)
chr1 (247-358)||(43131-43242)
chr1 (248-358)||(37649198-37649308)
chr1 (248-358)||(41758805-41758915)
chr1 (248-358)||(49811517-49811627)
chr1 (253-358)||(11152368-11152472)
chr1 (253-361)||(26274437-26274545)
chr1 (248-348)||(48489308-48489400)
chr1 (248-361)||(26440734-26440847)
chr1 (278-352)||(13414791-13414865)
chr1 (248-358)||(23597081-23597191)
chr1 (248-357)||(37926429-37926538)
chr1 (286-353)||(44332366-44332433)
chr1 (248-358)||(3302523-3302633)
chr1 (252-318)||(34340069-34340134)
chr1 (274-318)||(35003417-35003460)
chr1 (274-318)||(44112800-44112843)
chr1 (274-318)||(45705948-45705991)
chr1 (274-318)||(48119751-48119794)
[»] chr8 (33 HSPs)
chr8 (248-353)||(16383377-16383482)
chr8 (248-358)||(504111-504221)
chr8 (248-358)||(15258919-15259029)
chr8 (248-353)||(34307216-34307321)
chr8 (247-358)||(12831046-12831157)
chr8 (255-358)||(14547929-14548032)
chr8 (248-358)||(15197333-15197443)
chr8 (248-358)||(23122587-23122697)
chr8 (248-358)||(40423933-40424043)
chr8 (248-353)||(24307788-24307893)
chr8 (248-358)||(1179930-1180040)
chr8 (248-353)||(32032725-32032829)
chr8 (248-357)||(38229429-38229537)
chr8 (248-355)||(10284624-10284731)
chr8 (248-358)||(34012286-34012396)
chr8 (248-358)||(37038479-37038589)
chr8 (253-358)||(5957835-5957940)
chr8 (248-353)||(16056396-16056501)
chr8 (248-353)||(17443825-17443930)
chr8 (248-358)||(4854853-4854963)
chr8 (247-353)||(30479469-30479575)
chr8 (248-358)||(43414571-43414681)
chr8 (248-352)||(15048178-15048281)
chr8 (267-358)||(8841422-8841513)
chr8 (248-358)||(44507077-44507187)
chr8 (248-329)||(24307629-24307710)
chr8 (250-358)||(10621077-10621185)
chr8 (248-330)||(14055610-14055692)
chr8 (253-358)||(9122200-9122295)
chr8 (248-357)||(20074933-20075034)
chr8 (248-358)||(42221515-42221625)
chr8 (248-303)||(25838197-25838252)
chr8 (274-318)||(35181639-35181682)
[»] chr6 (23 HSPs)
chr6 (248-353)||(15508019-15508124)
chr6 (248-353)||(15990037-15990142)
chr6 (248-353)||(30341355-30341460)
chr6 (248-358)||(17598554-17598664)
chr6 (255-358)||(32869685-32869788)
chr6 (253-358)||(22880648-22880753)
chr6 (248-358)||(31976248-31976358)
chr6 (248-353)||(31953025-31953130)
chr6 (248-358)||(6209455-6209565)
chr6 (248-353)||(4231548-4231653)
chr6 (248-358)||(11427616-11427728)
chr6 (253-352)||(28536484-28536581)
chr6 (246-357)||(29857825-29857936)
chr6 (260-358)||(31109390-31109488)
chr6 (248-357)||(31110752-31110859)
chr6 (248-352)||(15832577-15832681)
chr6 (252-353)||(9379707-9379808)
chr6 (248-358)||(12732482-12732592)
chr6 (292-358)||(30870058-30870124)
chr6 (248-325)||(22422041-22422118)
chr6 (253-358)||(23128117-23128222)
chr6 (265-318)||(31109147-31109199)
chr6 (274-318)||(33242526-33242569)
[»] chr5 (31 HSPs)
chr5 (248-353)||(3921260-3921365)
chr5 (248-358)||(6679698-6679808)
chr5 (248-353)||(2252163-2252268)
chr5 (253-352)||(18520880-18520979)
chr5 (248-358)||(28177775-28177885)
chr5 (247-358)||(35943882-35943993)
chr5 (248-358)||(2740274-2740384)
chr5 (248-358)||(35785199-35785309)
chr5 (248-358)||(36732932-36733042)
chr5 (248-358)||(40145407-40145517)
chr5 (255-351)||(13811659-13811755)
chr5 (248-352)||(42414298-42414402)
chr5 (248-358)||(33149628-33149738)
chr5 (248-366)||(39688879-39688997)
chr5 (248-348)||(14831814-14831914)
chr5 (248-357)||(26720516-26720625)
chr5 (248-357)||(26990265-26990374)
chr5 (247-352)||(33825320-33825425)
chr5 (248-358)||(15409600-15409710)
chr5 (292-358)||(21370048-21370114)
chr5 (253-306)||(36875645-36875698)
chr5 (248-357)||(31008988-31009097)
chr5 (252-311)||(10356638-10356698)
chr5 (248-358)||(20073506-20073616)
chr5 (248-306)||(38296203-38296261)
chr5 (268-353)||(16327921-16328006)
chr5 (263-353)||(25831302-25831390)
chr5 (266-327)||(10227915-10227976)
chr5 (271-352)||(39557513-39557594)
chr5 (296-360)||(31132392-31132456)
chr5 (274-318)||(32473328-32473371)
[»] chr3 (39 HSPs)
chr3 (251-358)||(26754698-26754805)
chr3 (248-358)||(11907371-11907481)
chr3 (248-358)||(53982011-53982121)
chr3 (247-353)||(14623834-14623940)
chr3 (248-358)||(33644200-33644310)
chr3 (252-358)||(52629304-52629410)
chr3 (248-358)||(54868885-54868995)
chr3 (253-358)||(31456694-31456799)
chr3 (248-351)||(27714888-27714991)
chr3 (248-358)||(8076393-8076503)
chr3 (248-358)||(17470405-17470515)
chr3 (248-358)||(26141522-26141632)
chr3 (248-358)||(49607414-49607524)
chr3 (253-358)||(30801723-30801828)
chr3 (248-358)||(24699944-24700054)
chr3 (248-358)||(48375696-48375806)
chr3 (248-353)||(45058548-45058652)
chr3 (248-358)||(11347912-11348022)
chr3 (248-358)||(33118841-33118951)
chr3 (248-358)||(47531865-47531975)
chr3 (248-353)||(35536626-35536731)
chr3 (253-353)||(13898050-13898150)
chr3 (253-361)||(48587078-48587186)
chr3 (270-353)||(36331324-36331407)
chr3 (248-357)||(11095346-11095453)
chr3 (248-358)||(41080709-41080817)
chr3 (248-358)||(41189754-41189864)
chr3 (248-358)||(20764905-20765015)
chr3 (251-353)||(42823114-42823216)
chr3 (248-358)||(51419350-51419460)
chr3 (248-358)||(1758446-1758558)
chr3 (248-353)||(8956762-8956867)
chr3 (248-319)||(36331407-36331478)
chr3 (248-351)||(35093585-35093688)
chr3 (252-353)||(25395328-25395429)
chr3 (248-313)||(36707459-36707524)
chr3 (253-358)||(25407137-25407243)
chr3 (266-318)||(4190191-4190242)
chr3 (274-318)||(9434247-9434290)
[»] chr4 (43 HSPs)
chr4 (248-358)||(6034044-6034154)
chr4 (248-358)||(41236347-41236457)
chr4 (248-358)||(50052418-50052528)
chr4 (248-353)||(19670711-19670816)
chr4 (248-353)||(32766958-32767063)
chr4 (248-358)||(48183039-48183149)
chr4 (248-357)||(11511453-11511562)
chr4 (248-353)||(47986208-47986313)
chr4 (248-353)||(50813887-50813992)
chr4 (248-353)||(55475191-55475296)
chr4 (247-330)||(55079732-55079815)
chr4 (248-358)||(480437-480547)
chr4 (248-358)||(29239886-29239996)
chr4 (266-353)||(17983738-17983825)
chr4 (248-358)||(42044357-42044467)
chr4 (248-358)||(54473523-54473633)
chr4 (248-356)||(3481654-3481762)
chr4 (248-358)||(24995097-24995207)
chr4 (248-358)||(28480258-28480368)
chr4 (248-358)||(28481133-28481243)
chr4 (248-358)||(28482008-28482118)
chr4 (248-358)||(29234235-29234345)
chr4 (248-358)||(48647716-48647826)
chr4 (248-358)||(50526161-50526271)
chr4 (248-353)||(29547954-29548059)
chr4 (248-358)||(31910192-31910302)
chr4 (248-353)||(29977885-29977990)
chr4 (248-353)||(44536741-44536845)
chr4 (248-353)||(8343158-8343263)
chr4 (248-353)||(18924490-18924595)
chr4 (256-353)||(29589735-29589831)
chr4 (248-313)||(40574779-40574844)
chr4 (248-352)||(23608235-23608339)
chr4 (289-358)||(56300155-56300224)
chr4 (292-366)||(41823926-41824000)
chr4 (252-358)||(53352556-53352661)
chr4 (292-358)||(18769037-18769103)
chr4 (292-358)||(18769153-18769219)
chr4 (248-306)||(29535377-29535435)
chr4 (274-318)||(712083-712126)
chr4 (274-318)||(19880077-19880120)
chr4 (274-318)||(35037128-35037171)
chr4 (274-318)||(55272310-55272353)
[»] scaffold0018 (1 HSPs)
scaffold0018 (264-353)||(152514-152603)
[»] scaffold0316 (1 HSPs)
scaffold0316 (248-357)||(17058-17163)
[»] scaffold0237 (1 HSPs)
scaffold0237 (246-357)||(4027-4138)
[»] scaffold1268 (1 HSPs)
scaffold1268 (248-358)||(919-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (248-358)||(919-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (248-358)||(10099-10209)
[»] scaffold0110 (1 HSPs)
scaffold0110 (248-356)||(8855-8963)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 1655331 - 1655107
Alignment:
Q  8 tgttagaattttaaaagaattaactttaaggtcaagtacaaccgatattactgacattgttaggttgaatatctttgatggtgtcctagattcaaagacg 107  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1655331 tgttagaattttaaaagaattaactttaaggtcaggtacaaccgataataccgacattgttaggttgaatatctttgatggtgtcctagattcaaagacg 1655232  T
Q  108 acactaaaaattttgaaggaagctaccatnnnnnnnntgaaggaagttttgattgattatttttacaaacatccaagatcgtccctttgattttaagtgt 207  Q
    |||||| ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1655231 acactataaattttgaaggaagctaccataaaaaaaacgaaggaagttttgattgattatttttacaaacatccaagatcgtccctctgattttaagtgt 1655132  T
Q  208 catataaataatgaatttggtgctc 232  Q
    |||||||||||||||||||||||||    
T  1655131 catataaataatgaatttggtgctc 1655107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 36208173 - 36208283
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||||||||||||||||||||||||||| ||||||    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttc 36208272  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  36208273 tctttcctctc 36208283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 22343361 - 22343466
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||| ||||||| ||||||| ||| ||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttc 22343460  T
Q  348 tctttc 353  Q
    ||||||    
T  22343461 tctttc 22343466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 41915741 - 41915846
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 41915840  T
Q  348 tctttc 353  Q
    ||||||    
T  41915841 tctttc 41915846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 7389389 - 7389499
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  7389489 tcttttctctc 7389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 19329842 - 19329952
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| ||  ||| |||||||| ||||||||||| ||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  19329942 tcttttctctc 19329952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 361
Target Start/End: Original strand, 3434562 - 3434675
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||| || |||| ||||| || ||||||||||| ||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  348 tctttcctctcttc 361  Q
    ||||| ||||||||    
T  3434662 tcttttctctcttc 3434675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 3784000 - 3784105
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| || |||| ||||| || ||||||||||| |||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3784099  T
Q  353 cctctc 358  Q
     |||||    
T  3784100 tctctc 3784105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 38044197 - 38044302
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| | ||| ||||||| ||||||| ||| ||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  348 tctttc 353  Q
    ||||||    
T  38044297 tctttc 38044302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 352
Target Start/End: Complemental strand, 4999616 - 4999510
Alignment:
Q  246 tggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattt 345  Q
    |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| | || |||| |||||||| |||||| |||| ||    
T  4999616 tggagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactt 4999517  T
Q  346 tctcttt 352  Q
    |||||||    
T  4999516 tctcttt 4999510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 8080483 - 8080373
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||| ||| ||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  8080383 tcttttctctc 8080373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 8238212 - 8238318
Alignment:
Q  248 gagttatgatacatagacaccct-taggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    ||||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||| ||||||||| ||||| ||||||| ||||||| ||| |||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacacttt 8238311  T
Q  347 ctctttc 353  Q
    |||||||    
T  8238312 ctctttc 8238318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 38267040 - 38267150
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||| ||| |||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  38267140 tcttttctctc 38267150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 7727906 - 7728011
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||  |||| ||||| ||||||||||||||| ||||||| ||||||| ||| ||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 7728005  T
Q  348 tctttc 353  Q
    | ||||    
T  7728006 tgtttc 7728011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 366
Target Start/End: Original strand, 35522877 - 35522994
Alignment:
Q  249 agttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttct 348  Q
    |||||||||||||||||| ||||| |||||||||||||  || ||||||||||||||| |||||| |||| ||| |||| || ||||||||||| |||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  349 ctttcctctcttcatctc 366  Q
    |||| |||||||| ||||    
T  35522977 cttttctctcttcttctc 35522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 36362013 - 36361904
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||| || |||| ||||||||  |||||||||| ||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  36361913 tcttttctct 36361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 38837217 - 38837327
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttg-acacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    |||| |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||||| || |||| |||||||| ||||||||||| |||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacc-cttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38837315  T
Q  347 ctctttcctctc 358  Q
    |||||| |||||    
T  38837316 ctcttttctctc 38837327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 18207180 - 18207289
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || ||| |||| || ||| ||||  |||||||||| ||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttc 18207278  T
Q  348 tctttcctctc 358  Q
    |||||| ||||    
T  18207279 tctttcatctc 18207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 35137533 - 35137643
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||| |||||||||||||||||||||||||||  |||||||||||||||||| || ||| || |||| |||||||| |||||| |||| ||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  35137633 tcttttctctc 35137643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 3694372 - 3694477
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||| ||| ||||||||||||| |||||||||| || ||||||||||||||| |||||| || |||||||||| || ||||||||||| |||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttt 3694471  T
Q  353 cctctc 358  Q
     |||||    
T  3694472 tctctc 3694477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 19436287 - 19436178
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| ||||||||| |||||||||| |||||||||||||||||| |||||| || |||| ||||| || ||| ||||||| ||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  19436187 tcttttctct 19436178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 32564526 - 32564421
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||||| |||||||||||  || ||||||| ||||||  ||| ||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  348 tctttc 353  Q
    ||||||    
T  32564426 tctttc 32564421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 357
Target Start/End: Original strand, 36362026 - 36362135
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||| |||||| |  |||||||||||||||||| |||||| || |||| ||||||||  |||||||||| ||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  36362126 tcttttctct 36362135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 10343663 - 10343553
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||  || |   |||||| ||||| | ||||| ||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacacatgtttccgtggactctgcagacgcacactttc 10343564  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  10343563 tctttcctctc 10343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 40846214 - 40846108
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||| || |||||| || || ||||||| ||||||  ||| |||    
T  40846214 ggagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacacttt 40846115  T
Q  347 ctctttc 353  Q
    |||||||    
T  40846114 ctctttc 40846108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 41423682 - 41423792
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| | |||| ||| |||||||||||||||||  ||||||||| |||||||||||||| || || || | ||||||| ||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  348 tctttcctctc 358  Q
    |||||| ||||    
T  41423782 tctttcatctc 41423792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 12310906 - 12311011
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||||||||||||||||||||||||||| |||| |  ||| || | ||| ||||||| |||||||||||||| ||||| |||| |||||||||||||     
T  12310906 gagttatgatacatagacacccttaggtggaaatata--tctggatatccatacaaaaatctgacatgtggtcacgtggatcctgaacaagcacatttta 12311003  T
Q  348 tctttcct 355  Q
    ||||||||    
T  12311004 tctttcct 12311011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 35468955 - 35468848
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||| |||||||||| |  |||||||||||| ||||| || | |||||  |||||||||||||||||| |||| ||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttc 35468856  T
Q  348 tctttcct 355  Q
    ||||||||    
T  35468855 tctttcct 35468848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 46374902 - 46374807
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacat 343  Q
    ||||||||||||||||||| ||||||||||||| |||||  || ||||||||||||||| |||||| |||| ||  ||||||| ||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacat 46374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 21234401 - 21234511
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||||||| |||||||||  ||||||| ||||||||||  ||||| || | ||  || |||| ||||||||||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  348 tctttcctctc 358  Q
    |||| ||||||    
T  21234501 tcttacctctc 21234511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 39256023 - 39255914
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||| |||||| |||| || |||||| |  |||||| ||| ||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggactccacacaagaacactttc 39255925  T
Q  348 tctttcctctc 358  Q
    |||||| ||||    
T  39255924 tctttcatctc 39255914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 40957707 - 40957817
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||| |||||||||||||||||   |||| ||||||||||||| |||||| || |||| ||||| || | ||||||||| ||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttc 40957806  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  40957807 tcttttctctc 40957817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 2318338 - 2318233
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||||||  ||| || |||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||  || ||||| | |||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T
Q  353 cctctc 358  Q
    | ||||    
T  2318238 catctc 2318233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 26296644 - 26296754
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||||||| ||||| |||  || ||| ||||| ||||| |||| | |||| ||| ||||||| |||||||| |||||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttc 26296743  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  26296744 tcttttctctc 26296754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 46033901 - 46033791
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||| |  ||||||||||||||||||  || ||||||||| ||||| |||||| |||||||  || || | ||||||||| ||||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttc 46033802  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  46033801 tcttttctctc 46033791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 32951588 - 32951483
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    ||||||||||||||| ||||| || ||||||| |  || ||| ||||||||||| || ||| || |||| |||||||| ||||||||||| |||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 32951489  T
Q  353 cctctc 358  Q
     |||||    
T  32951488 tctctc 32951483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 31735884 - 31735940
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaa 304  Q
    ||||||||||||||||||| ||||||||||||||||||   || |||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 11044188 - 11044288
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||||||||||| |  |||||||||          |||||| || |||| |||||||| ||||||| ||| ||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacactttc 11044277  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  11044278 tctttcctctc 11044288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 27744368 - 27744299
Alignment:
Q  289 ttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctc 358  Q
    |||| ||||||||||||| ||||||||||| || ||||| ||  || ||||||||||||||| |||||||    
T  27744368 ttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctctatcctctc 27744299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 360
Target Start/End: Complemental strand, 16374894 - 16374812
Alignment:
Q  278 caatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctctt 360  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||||| ||||| |   ||||||||||  ||||||||| ||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctctt 16374812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 31513473 - 31513410
Alignment:
Q  254 tgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||  ||||||||| ||||||||||||||||| ||| | ||||||||  |||||||||||    
T  31513473 tgatacatgtacacccttatgtggcaatacacctctt-acatctacacaaaatcctgacatgtgg 31513410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 40237085 - 40237042
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  40237085 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 40237042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 43317629 - 43317566
Alignment:
Q  254 tgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||  ||||||||  ||||||||||||| ||| ||||||||||||||  |||||||||||    
T  43317629 tgatacatgtacacccttgtgtggcaatacacccctt-acacccacacaaaattctgacatgtgg 43317566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 26891604 - 26891495
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||||||||||||| |||||||||||||||||||||| || |||||||||||||||| |||||||||||||| |||||||  | ||||||||||||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttc 26891505  T
Q  348 tctttcctct 357  Q
    ||||||||||    
T  26891504 tctttcctct 26891495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 9058480 - 9058590
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || ||||||||||||| ||||||||||| ||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  9058580 tcttttctctc 9058590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 10249482 - 10249372
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  10249382 tcttttctctc 10249372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 33436200 - 33436090
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| || ||| || |||| |||||||| ||||||||||| ||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  33436100 tctttcctctc 33436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 352
Target Start/End: Original strand, 28863460 - 28863559
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| |||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 28863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 17820104 - 17819994
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||| |||||||||||| | ||||||||  ||||| |||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  348 tctttcctctc 358  Q
    |||||| ||||    
T  17820004 tctttcatctc 17819994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 32505748 - 32505638
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  348 tctttcctctc 358  Q
    | ||| |||||    
T  32505648 tattttctctc 32505638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 38732353 - 38732459
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    |||||||||||||||| ||||||||| ||| ||||||| | ||||||||||||||||||| ||||||||||||||| ||||||| ||||||| ||| |||    
T  38732353 ggagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacacttt 38732452  T
Q  347 ctctttc 353  Q
    |||||||    
T  38732453 ctctttc 38732459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 40614002 - 40613892
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||| |||| ||  ||||||| ||||||||||| ||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  40613902 tcttttctctc 40613892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 40701478 - 40701588
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || || | |||||||| |||||| |||| ||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  40701578 tcttttctctc 40701588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 19930915 - 19930810
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||| |||||| || ||||||||||||| |||||| |||| |||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttt 19930816  T
Q  353 cctctc 358  Q
     |||||    
T  19930815 tctctc 19930810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 43490121 - 43490226
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| |||     
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttta 43490220  T
Q  348 tctttc 353  Q
    ||||||    
T  43490221 tctttc 43490226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 3439985 - 3440089
Alignment:
Q  254 tgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    |||||| |||||||||||||||||||||||||  || |||||||||||||||| || ||||||| | | |||||||| ||||||||||||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttc 3440084  T
Q  354 ctctc 358  Q
    |||||    
T  3440085 ctctc 3440089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 247 - 358
Target Start/End: Original strand, 17473019 - 17473130
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    ||||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||||| |||||| || |||| ||||| || ||||||||||| |||    
T  17473019 ggagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 17473118  T
Q  347 ctctttcctctc 358  Q
    |||||| |||||    
T  17473119 ctcttttctctc 17473130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 366
Target Start/End: Complemental strand, 7465835 - 7465717
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||||| |||||| || |||| ||||||||  |||||||||| ||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  348 tctttcctctcttcatctc 366  Q
    |||||  ||||||| ||||    
T  7465735 tcttttatctcttcttctc 7465717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 13438343 - 13438453
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||| ||||||| |  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  13438443 tcttttctctc 13438453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 28381755 - 28381645
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| || ||||  ||||| | ||||||||||| ||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  28381655 tcttttctctc 28381645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 45097835 - 45097730
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||| ||||||||||||||||| | ||||||||||| ||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 45097736  T
Q  348 tctttc 353  Q
    ||||||    
T  45097735 tctttc 45097730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 2997569 - 2997482
Alignment:
Q  266 acccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 2997482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 33436211 - 33436318
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||| ||||||||||||| |||||||||||| ||||| |||||| |||  |||||||||  |||||||||||| ||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttc 33436310  T
Q  348 tctttcct 355  Q
    ||||||||    
T  33436311 tctttcct 33436318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 30915463 - 30915573
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||| |||||| ||||| |||||| || |||| |||||||| | ||||||||| ||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  30915563 tcttttctctc 30915573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 5574588 - 5574479
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||| ||||||||||||||||||  |||||||||||| ||||| |||||| || |||| ||||| || ||||||||||| ||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  5574488 tcttttctct 5574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 3737986 - 3738053
Alignment:
Q  291 gacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctc 358  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttctttttcctctc 3738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 20700815 - 20700925
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| ||||| |||||||||||||  ||||| || ||||||||| |||||| || |||| |||||||| ||| ||||||| ||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  20700915 tctttcctctc 20700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 42257193 - 42257303
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| | ||||||||||||||| |  |||||||||||| ||||| |||||| |||| ||  ||||||| ||||||||||| ||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttc 42257292  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  42257293 tcttttctctc 42257303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 27864704 - 27864809
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||| |||||||||||||  |||||| ||||||||||| |||||| ||  ||| |||||||| ||| ||||||| ||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  348 tctttc 353  Q
    ||||||    
T  27864804 tctttc 27864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 13365351 - 13365458
Alignment:
Q  248 gagttatgatacatagacac--ccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattt 345  Q
    ||||||||||||||| ||||  |||||| |||||||| ||| ||||||||||||||||||| ||||||||||  ||| ||||||| ||||||| ||| ||    
T  13365351 gagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactt 13365450  T
Q  346 tctctttc 353  Q
    ||||||||    
T  13365451 tctctttc 13365458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 4060685 - 4060795
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||| |||||| || || | ||||| || ||| ||||||| ||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  348 tctttcctctc 358  Q
    | ||| |||||    
T  4060785 ttttttctctc 4060795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 41575142 - 41575248
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtgga-ccctgcacaagcacattttctctt 351  Q
    |||||||||||||| |||||| ||| ||||||||  ||||||  ||||||||||  ||||||||||||||||||| |||| |||||||||| ||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctt 41575241  T
Q  352 tcctctc 358  Q
    || ||||    
T  41575242 tcatctc 41575248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 15428840 - 15428730
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||| ||||| ||||| ||||||| ||| |||| |||||||||| ||||||||||| |||||  ||||  | ||| |||||||||    
T  15428840 gagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggccatgtaaaccccacgcaaacacattttc 15428741  T
Q  348 tctttcctctc 358  Q
    |||||| ||||    
T  15428740 tctttcatctc 15428730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 38273242 - 38273132
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||||||||||||||||  ||||| ||||||||||||  || ||||||||||||||| |||||| || | ||  ||||||| |||| |||||| ||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttc 38273143  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  38273142 tcttttctctc 38273132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 330
Target Start/End: Complemental strand, 38882913 - 38882832
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccc 330  Q
    |||| |||||||||||||||||||||||||||||| |||  |||||| ||||||||||| |||||| || |||| ||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggaccc 38882832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 36168836 - 36168946
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||| || ||||||| |  || || ||||||||||||  ||||| |||| ||  ||||||| ||||||||| | ||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttc 36168935  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  36168936 tcttttctctc 36168946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 352
Target Start/End: Original strand, 2533124 - 2533227
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||| ||||||||||| |  |||||| ||||||||||| |||||| || | ||  | ||||| ||||||||||| |||     
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacactttt 2533222  T
Q  348 tcttt 352  Q
    |||||    
T  2533223 tcttt 2533227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 353
Target Start/End: Complemental strand, 3035033 - 3034978
Alignment:
Q  298 acacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    ||||||||| ||||||||||||||| ||||||| ||||||| | | ||||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctctttc 3034978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 17823784 - 17823849
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgaca 313  Q
    |||| |||||||||| ||| |||||||||||||||||   ||  ||||||||||||||| ||||||    
T  17823784 gagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgaca 17823849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 11825588 - 11825631
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  11825588 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 11825631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 34895675 - 34895718
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  34895675 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 34895718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 43114743 - 43114680
Alignment:
Q  254 tgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||  ||||||| | ||||||||||||||||| ||||||||||||||  |||||| ||||    
T  43114743 tgatacatgtacaccctcatgtggcaatacacctctt-acacccacacaaaatcctgacaagtgg 43114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 5959100 - 5958995
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| ||| ||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 5959001  T
Q  348 tctttc 353  Q
    ||||||    
T  5959000 tctttc 5958995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 50591100 - 50590995
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  348 tctttc 353  Q
    ||||||    
T  50591000 tctttc 50590995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 2581915 - 2582025
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  348 tctttcctctc 358  Q
    | ||| |||||    
T  2582015 ttttttctctc 2582025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 8346488 - 8346378
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||| |||| |||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||||||||||||||| ||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttc 8346389  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  8346388 tcttttctctc 8346378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 9474976 - 9474866
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| |||||| |||| ||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  9474876 tcttttctctc 9474866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 27564835 - 27564725
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| ||  ||| |||||||| ||||||||||| ||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  27564735 tcttttctctc 27564725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 32813247 - 32813357
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||||||||||||||||  || ||||||||||||||| |||||| |||||||  ||||||| ||||||||||| ||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  32813347 tcttttctctc 32813357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 3000319 - 3000429
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||| |||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| | ||||||||| ||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  3000419 tcttttctctc 3000429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 38632421 - 38632311
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||||| || |||| |||||||| ||||||||||| |||     
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  38632321 tcttttctctc 38632311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 41608593 - 41608488
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||| ||||||| | ||||| ||| ||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  348 tctttc 353  Q
    ||||||    
T  41608493 tctttc 41608488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 44453980 - 44454089
Alignment:
Q  249 agttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttct 348  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||| |||||||||||| | ||||| ||  |||||||||| ||| |    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttttt 44454079  T
Q  349 ctttcctctc 358  Q
    ||||||||||    
T  44454080 ctttcctctc 44454089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 366
Target Start/End: Complemental strand, 44548471 - 44548358
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||||||||||| | |||||||||||||||||  |||| ||||||||||||| |||||| || |||| |||||||| ||||||||||| |||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 44548372  T
Q  353 cctctcttcatctc 366  Q
     |||||||| ||||    
T  44548371 tctctcttcttctc 44548358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 248 - 352
Target Start/End: Complemental strand, 48716382 - 48716278
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||| ||||||||||| |||||| || |||| |||||||| ||||||||||| |||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  348 tcttt 352  Q
    |||||    
T  48716282 tcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 38595154 - 38595264
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||| ||||| |||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| | ||||||||| ||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  38595254 tcttttctctc 38595264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 47452420 - 47452310
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||| || ||| || |||| ||||| || ||||||||||| ||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  47452320 tcttttctctc 47452310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 51898783 - 51898673
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||| || |||| ||||| || ||||||||||| ||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 51898684  T
Q  348 tctttcctctc 358  Q
    | |||||||||    
T  51898683 tatttcctctc 51898673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 50630458 - 50630568
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||| ||||||||||||||||||| |  |||  ||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  50630558 tcttttctctc 50630568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 6260870 - 6260980
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||| ||||| | |||||||||| |||||||| ||  ||||||||| ||||| || ||||||||||| |||||||| ||| ||||||||||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttc 6260969  T
Q  348 tctttcctctc 358  Q
    | |||| ||||    
T  6260970 tatttcttctc 6260980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 45044660 - 45044551
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| |   |||||||||||||||||||  |||||||||| ||||||| ||||||||| | ||  ||||||| |||||| |||||||||    
T  45044660 gagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttc 45044561  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  45044560 tcttttctct 45044551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 47748443 - 47748547
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||||||||| | ||||| ||||||||||| ||| |||| || ||||||| | | ||||    
T  47748443 gagttatgatacataaatacccttaggtggcaatacacc-cttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttc 47748541  T
Q  348 tctttc 353  Q
    ||||||    
T  47748542 tctttc 47748547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 358
Target Start/End: Original strand, 43131 - 43242
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    ||||| ||||||||||||||  |||||| | ||||||| |  |||||||||||||||||| |||||| || |||| |||||| | ||||||||||| |||    
T  43131 ggagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacacttt 43230  T
Q  347 ctctttcctctc 358  Q
    |||||| |||||    
T  43231 ctcttttctctc 43242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 37649198 - 37649308
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| | ||||||||||||||||   |||||||||||||||||| |||||| ||||||| ||| |  | ||||||||||| ||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  348 tctttcctctc 358  Q
     |||| |||||    
T  37649298 ccttttctctc 37649308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 41758805 - 41758915
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||| |||  ||||||||||||  |||||| ||||||||||| |||||| || ||||  ||||||| |||||| |||| ||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttc 41758904  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  41758905 tcttttctctc 41758915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 49811627 - 49811517
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||| ||||||| ||||||||| |||||||||  |||||| ||||||||||| |||||| || | ||| | ||| | ||||||||||| ||||    
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttc 49811528  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  49811527 tcttttctctc 49811517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 11152472 - 11152368
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||| ||||||||||| |||||||||||||||||  | |||| ||||||||||| |||||| || ||||||| ||||| ||||||||||  ||||| |||    
T  11152472 atgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttcttttt 11152374  T
Q  353 cctctc 358  Q
    ||||||    
T  11152373 cctctc 11152368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 26274437 - 26274545
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||||||||||||||||| ||||||||||| |  |||||| ||||| ||||| ||||||  | |||| ||||| |||||||||| ||| ||| |||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttcttt 26274536  T
Q  353 cctctcttc 361  Q
     ||||||||    
T  26274537 tctctcttc 26274545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 348
Target Start/End: Original strand, 48489308 - 48489400
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||||       |||||||||||| || |||| ||||||||||| |||||||||||||| ||||| || ||||||||||||||||    
T  48489308 gagttatgatacatagacac-------tggcaatacacc-ctggacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttc 48489399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 248 - 361
Target Start/End: Original strand, 26440734 - 26440847
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||| |||| ||||||| |||||| || |||||||||  || ||||||||||||||| |||||| |||| ||  |||| || ||| ||||||| ||||    
T  26440734 gagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttc 26440833  T
Q  348 tctttcctctcttc 361  Q
    ||||| ||||||||    
T  26440834 tcttttctctcttc 26440847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 13414791 - 13414865
Alignment:
Q  278 caatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||||||  |||||||||||||||||| || ||| || |||| ||||||||  ||||||||||||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttt 13414865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 23597191 - 23597081
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| | ||||||||||||||||   |||| ||||||| ||||| |||||| |||| || || |||| ||||||| |||| |||     
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacacttta 23597092  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  23597091 tcttttctctc 23597081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 37926538 - 37926429
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||| | | ||||||||||||||| || || ||||||||| ||||| |||||| |||| ||  |||| || | ||||| ||| ||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttc 37926439  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  37926438 tcttttctct 37926429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 44332433 - 44332366
Alignment:
Q  286 ctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    ||||||||||||||| ||||| ||||||||||| | | ||||||| ||||||| | | ||||||||||    
T  44332433 ctcttgacacccacataaaaatctgacatgtggccctatggaccccgcacaagtatactttctctttc 44332366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 3302633 - 3302523
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||| ||| ||||||||| ||||| |   || |||||||||||||||| |||||| ||  |||| |||||||   ||||||||| ||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 3302534  T
Q  348 tctttcctctc 358  Q
    | |||| ||||    
T  3302533 tttttcatctc 3302523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 34340134 - 34340069
Alignment:
Q  252 tatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    |||||||||||||||| ||||||||| ||||||||| ||||   ||||||||||| |||||| ||||    
T  34340134 tatgatacatagacactcttaggtggtaatacacctgttga-tgccacacaaaaatctgacacgtgg 34340069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 35003460 - 35003417
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  35003460 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 35003417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 44112843 - 44112800
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  44112843 gtggcaatacacctctt-acacccacacaaaattctgacatgtgg 44112800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 45705991 - 45705948
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  45705991 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 45705948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 48119794 - 48119751
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  48119794 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 48119751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 16383377 - 16383482
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16383476  T
Q  348 tctttc 353  Q
    ||||||    
T  16383477 tctttc 16383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 504221 - 504111
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || |||| |||||||| |||||||||||  |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  504121 tcttttctctc 504111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 15259029 - 15258919
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||| || ||||| |||||||||| | || |||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  15259029 gagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttc 15258930  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  15258929 tctttcctctc 15258919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 34307216 - 34307321
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| || |||| ||||||| ||| ||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttc 34307315  T
Q  348 tctttc 353  Q
    ||||||    
T  34307316 tctttc 34307321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 247 - 358
Target Start/End: Original strand, 12831046 - 12831157
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    ||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| |||    
T  12831046 ggagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 12831145  T
Q  347 ctctttcctctc 358  Q
    |||||| |||||    
T  12831146 ctcttttctctc 12831157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 14547929 - 14548032
Alignment:
Q  255 gatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcc 354  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||||||| |    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttc 14548028  T
Q  355 tctc 358  Q
    ||||    
T  14548029 tctc 14548032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 15197333 - 15197443
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  15197433 tcttttctctc 15197443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 23122697 - 23122587
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| || |||| |||||||| ||| ||||||| ||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  23122597 tcttttctctc 23122587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 40424043 - 40423933
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||| |||||||||||||||||||||  |||||| ||||||||||| |||||| || ||||||||||||| ||||||||||| ||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  40423943 tcttttctctc 40423933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 24307893 - 24307788
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||| |||||| ||| ||||||| ||||||| ||| ||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttc 24307794  T
Q  348 tctttc 353  Q
    ||||||    
T  24307793 tctttc 24307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 1180040 - 1179930
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||| || ||||||||||  | ||||||||||| ||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  1179940 tcttttctctc 1179930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 32032725 - 32032829
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||| ||| |||| |||||||||| ||| ||||    
T  32032725 gagttatgatacataaacacccttaggtggcaatacatc-cttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttc 32032823  T
Q  348 tctttc 353  Q
    ||||||    
T  32032824 tctttc 32032829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 357
Target Start/End: Original strand, 38229429 - 38229537
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||  |||| ||||||||||||||| | || ||||||||||||||||| |||||||||||||| |||||  ||| ||||||||||||||    
T  38229429 gagttatgatacatgaacactcttaggtggcaatacgc-tcctgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttc 38229527  T
Q  348 tctttcctct 357  Q
    ||||||||||    
T  38229528 tctttcctct 38229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 10284731 - 10284624
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||||||||| ||| ||||||||   ||||||||||||||||||  ||||| || |||| |||||||| ||||||||||| ||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  348 tctttcct 355  Q
    ||||||||    
T  10284631 tctttcct 10284624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 34012396 - 34012286
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||  ||||| || |||| ||||| || ||||||||||| ||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  34012296 tcttttctctc 34012286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 37038479 - 37038589
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||| || |||| ||||| || ||||||||||| ||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 37038578  T
Q  348 tctttcctctc 358  Q
    | |||||||||    
T  37038579 tatttcctctc 37038589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 5957835 - 5957940
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    ||||||||||||||  ||||||||||||||||||  |||||||||||||||||| |||||| || |||| ||||| || |||||| |||| |||||||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctcttt 5957934  T
Q  353 cctctc 358  Q
    ||||||    
T  5957935 cctctc 5957940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 16056501 - 16056396
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||| ||||| ||| ||||||| | ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16056402  T
Q  348 tctttc 353  Q
    ||||||    
T  16056401 tctttc 16056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 17443825 - 17443930
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||||||| |||||||| |||| |||| |||||||||| ||||||||| |||||||||||||  |||||  ||| ||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttc 17443924  T
Q  348 tctttc 353  Q
    ||||||    
T  17443925 tctttc 17443930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 4854963 - 4854853
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||||||||||||||||  || ||||| ||| ||||| |||| |||||| ||  ||||||||||||||||||| ||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttc 4854864  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  4854863 tcttttctctc 4854853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 30479575 - 30479469
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    |||||||||||||||| |||||||||||||||||||||||  |||||| ||||| ||||| |||||||||||  || ||||||  ||||||| ||| |||    
T  30479575 ggagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacacttt 30479476  T
Q  347 ctctttc 353  Q
    |||||||    
T  30479475 ctctttc 30479469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 43414681 - 43414571
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||| |||||| |||||  |||||||||||||||||| || ||| |||||||  |||| || ||||||||||| ||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  43414581 tcttttctctc 43414571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 352
Target Start/End: Complemental strand, 15048281 - 15048178
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| ||||||||||| |||||| || | ||  ||||||| ||||||||||| ||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  348 tcttt 352  Q
    |||||    
T  15048182 tcttt 15048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 8841513 - 8841422
Alignment:
Q  267 cccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctc 358  Q
    ||||||||||||| ||||||  |||||||||||||||||| || ||| || |||| |||||||| ||||||||||| |||||||||||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctc 8841422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 44507187 - 44507077
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||| |||||||   || ||||||||||||||| |||||| || |||| |||||||| | ||||||| | ||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttc 44507088  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  44507087 tcttttctctc 44507077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 24307629 - 24307710
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggacc 329  Q
    ||||||||||||||| ||||||||||||||||||||| |  |||||||||||||||||| |||| |||||| ||| ||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtggccatatggacc 24307710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 250 - 358
Target Start/End: Complemental strand, 10621185 - 10621077
Alignment:
Q  250 gttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctc 349  Q
    ||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||| |||||| || | ||  | || || ||||||||||| ||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  350 tttcctctc 358  Q
    ||| |||||    
T  10621085 ttttctctc 10621077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 330
Target Start/End: Complemental strand, 14055692 - 14055610
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccc 330  Q
    |||||||||||||| |||||||||||||| ||||||||  ||||||| ||||||||||| || |||||| |||| ||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggaccc 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 9122200 - 9122295
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||||||||||||||||||||||||||||||          ||||||||||| ||||||||| |||| ||||| || ||||||||||| |||||||||    
T  9122200 atgatacatagacacccttaggtggcaatacac----------ccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttt 9122289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 20075034 - 20074933
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| ||||||||||||||||||   |||||||||||| |||||  |||        || |||||||||||||||||||| ||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtga--------cacgtggaccctgcacaagcacactttc 20074943  T
Q  348 tctttcctct 357  Q
    ||||||||||    
T  20074942 tctttcctct 20074933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 42221515 - 42221625
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||| ||| ||||||||| |||||||   || |||||||||||||||| |||||| ||  |||| |||||||   ||||||||| ||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 42221614  T
Q  348 tctttcctctc 358  Q
    |||||| ||||    
T  42221615 tctttcatctc 42221625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 303
Target Start/End: Original strand, 25838197 - 25838252
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaa 303  Q
    ||||||||||| ||||| | |||||||||||||||||| | |||||| ||||||||    
T  25838197 gagttatgataaatagatatccttaggtggcaatacactttttgacatccacacaa 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 35181682 - 35181639
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  35181682 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 35181639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 7e-34; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 15508124 - 15508019
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  348 tctttc 353  Q
    ||||||    
T  15508024 tctttc 15508019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 15990142 - 15990037
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15990043  T
Q  348 tctttc 353  Q
    ||||||    
T  15990042 tctttc 15990037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 30341460 - 30341355
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 30341361  T
Q  348 tctttc 353  Q
    ||||||    
T  30341360 tctttc 30341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 17598554 - 17598664
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  17598654 tcttttctctc 17598664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 32869685 - 32869788
Alignment:
Q  255 gatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcc 354  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||||||| |    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttc 32869784  T
Q  355 tctc 358  Q
    ||||    
T  32869785 tctc 32869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 22880753 - 22880648
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||  |||||| || |||| |||||||| ||||||||||| |||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 22880654  T
Q  353 cctctc 358  Q
     |||||    
T  22880653 tctctc 22880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 31976248 - 31976358
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||||||||||||| |||  || ||||||||||||||| |||||| |||||||  || |||| ||||||||||| ||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  31976348 tcttttctctc 31976358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 31953130 - 31953025
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||   ||||| |||| ||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  348 tctttc 353  Q
    ||||||    
T  31953030 tctttc 31953025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 6209565 - 6209455
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||||||||||||   ||||||| |||||||||| ||| || || |||| |||||||| |||| |||||| ||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttc 6209466  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  6209465 tcttttctctc 6209455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 4231548 - 4231653
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||||||| |||| ||| | ||||||||||||||||| |||| |||||||||||||| |||||| |||| ||| ||||||| ||||||| ||| ||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  348 tctttc 353  Q
    ||||||    
T  4231648 tctttc 4231653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 11427616 - 11427728
Alignment:
Q  248 gagttatgatacatagacaccct--taggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattt 345  Q
    |||| ||||||||||||||||||  |||||||||||||| |  |||||||||||||||||| |||||| || |||| ||||| || ||||||||||| ||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 11427715  T
Q  346 tctctttcctctc 358  Q
    ||||||| |||||    
T  11427716 tctcttttctctc 11427728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 352
Target Start/End: Complemental strand, 28536581 - 28536484
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||||||| ||| ||||||||||||||||| | ||||||||||||||||||| ||||||   ||||||||||||||  |||||||||| |||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgaca--cggtcatgtggaccccacacaagcacactttctcttt 28536484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 357
Target Start/End: Original strand, 29857825 - 29857936
Alignment:
Q  246 tggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattt 345  Q
    |||||| |||||||||||||||| |||| ||||||||||||| || ||||||||||||||| |||||| || || | ||||| || ||| ||||||| ||    
T  29857825 tggagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactt 29857924  T
Q  346 tctctttcctct 357  Q
    ||||||| ||||    
T  29857925 tctcttttctct 29857936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 358
Target Start/End: Complemental strand, 31109488 - 31109390
Alignment:
Q  260 atagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctc 358  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||| |||||| || |||| || ||||| ||| ||| ||| ||||||||| |||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctcttttctctc 31109390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 31110859 - 31110752
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||| ||||  |||| |||||| ||   ||  ||||||||||||||||||| ||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcacactttc 31110762  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  31110761 tcttttctct 31110752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 352
Target Start/End: Original strand, 15832577 - 15832681
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||| ||||||| ||||| | |  ||||||||||||||||||  ||||| || |||| ||||| |||||||||  ||||||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttc 15832676  T
Q  348 tcttt 352  Q
    |||||    
T  15832677 tcttt 15832681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 9379808 - 9379707
Alignment:
Q  252 tatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctt 351  Q
    ||||||||||||||| |||||| || ||||||| | ||||||||||| |||||||  ||||| |||| |||||||| |   ||||| |||||||||||||    
T  9379808 tatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctt 9379709  T
Q  352 tc 353  Q
    ||    
T  9379708 tc 9379707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 12732482 - 12732592
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||  |||| ||||||||| |    |||||||||||||||||| |||||| ||||  ||||||| ||  || ||||||||||||    
T  12732482 gagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattttc 12732581  T
Q  348 tctttcctctc 358  Q
    |||||| ||||    
T  12732582 tctttcatctc 12732592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 30870058 - 30870124
Alignment:
Q  292 acacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctc 358  Q
    ||||||| | ||||| || |||||||||||  ||||||| |||||||||||||||||||||||||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttcctctc 30870124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 22422118 - 22422041
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtg 325  Q
    |||| |||||||||||||| ||||||||||||||| | |||||||||| || ||||||  ||||||| ||| ||||||    
T  22422118 gagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgacatatggccatgtg 22422041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 23128222 - 23128117
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||| ||||||||| ||| |||  |||||| |  |||||||||||||||||| |||||| || |||| ||||| ||  |||||||||| |||||||||    
T  23128222 atgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttt 23128123  T
Q  353 cctctc 358  Q
     |||||    
T  23128122 tctctc 23128117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 31109147 - 31109199
Alignment:
Q  265 cacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||| || ||||||||||||||||| ||||||||||||||  |||||||||||    
T  31109147 cacccctatgtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 31109199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 33242569 - 33242526
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  33242569 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 33242526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 3921365 - 3921260
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 3921266  T
Q  348 tctttc 353  Q
    ||||||    
T  3921265 tctttc 3921260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 6679698 - 6679808
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||||| |||||||  ||||||| |||||| |||||||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttc 6679797  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  6679798 tcttttctctc 6679808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 2252268 - 2252163
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 2252169  T
Q  348 tctttc 353  Q
    ||||||    
T  2252168 tctttc 2252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 352
Target Start/End: Complemental strand, 18520979 - 18520880
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| |||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 18520880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 28177775 - 28177885
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||| |||||||  ||||||| |||||| |||| ||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  28177875 tcttttctctc 28177885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 247 - 358
Target Start/End: Complemental strand, 35943993 - 35943882
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||| || || | ||||| ||  |||||||||| |||    
T  35943993 ggagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacacttt 35943894  T
Q  347 ctctttcctctc 358  Q
    ||||||||||||    
T  35943893 ctctttcctctc 35943882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 2740274 - 2740384
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||| || |||| ||||| || ||||||||||| ||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  2740374 tcttttctctc 2740384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 35785199 - 35785309
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || || | ||||| || |||||| |||| ||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  35785299 tcttttctctc 35785309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 36733042 - 36732932
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||  | |||| |||||||| ||||||||||| ||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  36732942 tcttttctctc 36732932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 40145407 - 40145517
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  || ||| ||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  40145507 tcttttctctc 40145517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 255 - 351
Target Start/End: Original strand, 13811659 - 13811755
Alignment:
Q  255 gatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctt 351  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||||||    
T  13811659 gatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 248 - 352
Target Start/End: Complemental strand, 42414402 - 42414298
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||  ||||||||||||||||  |||||||||||||||||| |||||| || ||||||||||||| ||||||||||| |||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  348 tcttt 352  Q
    |||||    
T  42414302 tcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 33149738 - 33149628
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||  ||||| || |||| ||||| || ||||||||||| ||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  33149638 tcttttctctc 33149628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 366
Target Start/End: Complemental strand, 39688997 - 39688879
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||| |||| |||||||||| || |||| ||| ||| ||| ||||    
T  39688997 gagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttc 39688898  T
Q  348 tctttcctctcttcatctc 366  Q
    |||||| ||| ||| ||||    
T  39688897 tctttcttcttttcttctc 39688879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 348
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||| ||||||||||||||||||  |||||||||||| ||||| |||||| || |||| ||||| || ||||||||||| ||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  348 t 348  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 357
Target Start/End: Original strand, 26720516 - 26720625
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||||||||||||||||  || ||||| ||| ||||| |||||| |||| ||  |||| || ||||||||||| ||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  26720616 tcttttctct 26720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 357
Target Start/End: Original strand, 26990265 - 26990374
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||||||||||||||||  || ||||| ||| ||||| |||||| |||| ||  |||| || ||||||||||| ||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  26990365 tcttttctct 26990374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 352
Target Start/End: Complemental strand, 33825425 - 33825320
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    ||||| ||||| ||||||||  |||||||||||||||||  ||||||||||||| ||||| |||||| ||| ||||||| ||| | |||||||||| |||    
T  33825425 ggagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacacttt 33825326  T
Q  347 ctcttt 352  Q
    ||||||    
T  33825325 ctcttt 33825320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 15409710 - 15409600
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||||||| |||||||    |||||||||||||||||| |||||| || | ||  ||||||| ||||||||||| | ||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctc 15409611  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  15409610 tcttttctctc 15409600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 21370048 - 21370114
Alignment:
Q  292 acacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctc 358  Q
    |||||||| |||||| |||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctc 21370114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 36875698 - 36875645
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaa 306  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa 36875645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 357
Target Start/End: Original strand, 31008988 - 31009097
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttg-acacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    ||||||||||||||| ||| ||||||||| |||||||  ||||  ||||||||||||||| |||||| || |||| ||||| || ||||||||||| |||    
T  31008988 gagttatgatacataaacatccttaggtgacaatacat-tcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 31009086  T
Q  347 ctctttcctct 357  Q
    || ||||||||    
T  31009087 ctatttcctct 31009097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 311
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  252 tatgatacatagacacccttaggtggcaataca-cctcttgacacccacacaaaaagctga 311  Q
    ||||||||||||||| ||||||||||||||||| ||  |||||||||||||||||| ||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 20073616 - 20073506
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||| ||||||| | |||| || |||||||||  ||||||| |||| ||||| ||  || |||  || |||||||||||||||||||| ||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  348 tctttcctctc 358  Q
    | |||||||||    
T  20073516 tatttcctctc 20073506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 38296203 - 38296261
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaa 306  Q
    ||||||||||||||||||   |||||||| ||||||||||||| | |||||||||||||    
T  38296203 gagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaa 38296261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 353
Target Start/End: Original strand, 16327921 - 16328006
Alignment:
Q  268 ccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    ||||||||||||||||| |  |||||||||||| ||||| |||||| ||| ||||||| |||   |||||||||| ||| ||||||    
T  16327921 ccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttctttc 16328006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 353
Target Start/End: Original strand, 25831302 - 25831390
Alignment:
Q  263 gacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    |||| ||||| |||||||||||||||  || |  |||| ||||| || ||| ||||||||||||||||  ||||| |||||||||||||||    
T  25831302 gacatccttaagtggcaatacacctc--gagattcacaaaaaaatctaacacgtggtcatgtggaccccacacaaacacattttctctttc 25831390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 10227976 - 10227915
Alignment:
Q  266 acccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtgga 327  Q
    ||||||| ||||||||||| | ||||||||| | ||||||| |||||||||| | |||||||    
T  10227976 acccttatgtggcaatacatcccttgacaccgatacaaaaatctgacatgtgattatgtgga 10227915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 352
Target Start/End: Complemental strand, 39557594 - 39557513
Alignment:
Q  271 taggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    ||||||| |||||||||||| ||| ||||||||||| |||||| ||| |||  |||||||   |||| |||| |||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttt 39557513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 31132392 - 31132456
Alignment:
Q  296 ccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctctt 360  Q
    ||||||||||| |||||| || |||| |||||||| ||||||||| | ||| ||||| |||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttcttttctctctt 31132456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 32473328 - 32473371
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  32473328 gtggcaatacacctctt-acacccacacaaaattctgacatgtgg 32473371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 26754698 - 26754805
Alignment:
Q  251 ttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctct 350  Q
    ||||||| ||||||||||||||||||||||||||||  | |||| ||||||||||| ||||||||||||||  ||||||| |||||||||||||||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T
Q  351 ttcctctc 358  Q
    ||||||||    
T  26754798 ttcctctc 26754805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 11907371 - 11907481
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||||||||||||| ||||||||  ||  |||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttc 11907470  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  11907471 tcttttctctc 11907481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 53982011 - 53982121
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  53982111 tcttttctctc 53982121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 14623940 - 14623834
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||   |||||||||| |||    
T  14623940 ggagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacacttt 14623841  T
Q  347 ctctttc 353  Q
    |||||||    
T  14623840 ctctttc 14623834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 33644200 - 33644310
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  33644300 tcttttctctc 33644310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 52629304 - 52629410
Alignment:
Q  252 tatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctt 351  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| | ||||||||| ||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T
Q  352 tcctctc 358  Q
    | |||||    
T  52629404 ttctctc 52629410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 54868995 - 54868885
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || || | |||||||| |||||| |||| ||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 54868896  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  54868895 tcttttctctc 54868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 31456694 - 31456799
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    ||||||||||||||||| |||| |||||||||||  |||||||||||||||||| |||||| || ||||||||||||| ||||||||||| |||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 31456793  T
Q  353 cctctc 358  Q
     |||||    
T  31456794 tctctc 31456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 248 - 351
Target Start/End: Complemental strand, 27714991 - 27714888
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||| |||||||| ||||||||  |||||||||||||||||| |||||| || ||||||||||||| ||||||||||| ||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  348 tctt 351  Q
    ||||    
T  27714891 tctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 8076393 - 8076503
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||| |||||||||||||||| ||||||  |||||||||||||||||| || ||| || |||| |||||||| ||||||||||| ||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  8076493 tctttcctctc 8076503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 17470405 - 17470515
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||| |||||||||||||||||| || ||||||||||||||| |||||| || |||| ||||||||  |||||||||| ||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  17470505 tcttttctctc 17470515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 26141632 - 26141522
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||||||||||||||||  || ||||||||||||||| |||||| |||||||  |||||||  |||||||||| ||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  26141532 tcttttctctc 26141522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 49607414 - 49607524
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| ||||| ||  |||||||||| ||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttc 49607513  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  49607514 tcttttctctc 49607524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 30801828 - 30801723
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    ||||||||||||||||||||||||  ||||||||  |||| |||||||||||||  |||||||| ||||| |||||||  ||||||||||||||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctcttt 30801729  T
Q  353 cctctc 358  Q
    ||||||    
T  30801728 cctctc 30801723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 24700054 - 24699944
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||| ||||||||||||| |||||||||||| ||||| ||| || |||| || |||||||||| |||| |||| ||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttc 24699955  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  24699954 tctttcctctc 24699944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 48375806 - 48375696
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||||||| |||||||||||||||||| ||||||||| ||  | | ||| ||||||| ||||| ||||||||  ||||||| ||||||||||||||||    
T  48375806 gagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttc 48375707  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  48375706 tctttcctctc 48375696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 45058652 - 45058548
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||  ||| ||||||| ||||||| | | ||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacacc-cttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  348 tctttc 353  Q
    ||||||    
T  45058553 tctttc 45058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 11348022 - 11347912
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||||||| ||||||| |  |||||| ||||||||||| |||||| |||| ||  ||||||||||| ||||||| ||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttc 11347923  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  11347922 tcttttctctc 11347912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 33118951 - 33118841
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||  ||||| || |||| ||||| ||  || || |||| ||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttc 33118852  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  33118851 tctttcctctc 33118841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 47531865 - 47531975
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||| ||||||||||||| || ||| |||||||| || |||||| |||| ||| || |||| ||||||||||| ||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  47531965 tcttttctctc 47531975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 35536626 - 35536731
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| ||||| |||||||||||||  |||||||||||| |||||  ||||| ||||||||||||||| | |||||||||| || |    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcc 35536725  T
Q  348 tctttc 353  Q
    ||||||    
T  35536726 tctttc 35536731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 353
Target Start/End: Complemental strand, 13898150 - 13898050
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||| ||| ||| ||||||||||||||||||| ||||||||||||| ||||| |||||| ||| |||||||||||   |||||||||| |||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T
Q  353 c 353  Q
    |    
T  13898050 c 13898050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 48587186 - 48587078
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctcttt 352  Q
    |||||||||||| |||||||||||||||||||||  |||||||| ||| ||||| |||||| || |||| ||||| || ||||||| ||| |||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt 48587087  T
Q  353 cctctcttc 361  Q
     ||||||||    
T  48587086 tctctcttc 48587078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 353
Target Start/End: Complemental strand, 36331407 - 36331324
Alignment:
Q  270 ttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 36331324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 11095453 - 11095346
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || |||| ||  |||| ||| || |||| ||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactttc 11095356  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  11095355 tcttttctct 11095346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 41080709 - 41080817
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||| | |||| |||||  ||||||||||| |||||| |||| ||||||||||||||||||  |||||||||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc-acacaagcacattttc 41080806  T
Q  348 tctttcctctc 358  Q
    |||||| ||||    
T  41080807 tctttcatctc 41080817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 41189864 - 41189754
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||| ||||||||||||||||| |  |||||||||||| |||||  ||||| |||| ||  ||||||| ||||||||||| ||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  41189764 tcttttctctc 41189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 20765015 - 20764905
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||| ||||||||| |||||||||| |||||||   || ||||||||||||||| |||||| |||| ||  ||||||| | ||||||||| ||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  20764915 tcttttctctc 20764905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 353
Target Start/End: Original strand, 42823114 - 42823216
Alignment:
Q  251 ttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctct 350  Q
    |||||||||||| ||||| ||| |||| |||||||| ||||||||||||| |||||  |||||||||||||| ||||||| ||| ||| | | |||||||    
T  42823114 ttatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctct 42823213  T
Q  351 ttc 353  Q
    |||    
T  42823214 ttc 42823216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 51419460 - 51419350
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| |||||| || ||||||| |  || ||||||||||||||| |||||| |||| ||  | ||||| ||||||||||| ||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  51419360 tcttttctctc 51419350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 1758558 - 1758446
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctc--ttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattt 345  Q
    |||||||||||||||| || || ||||| |||||||||| |  |||||||||||||||||| ||||||| |||| | |||||| |  ||||| |||||||    
T  1758558 gagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacattt 1758459  T
Q  346 tctctttcctctc 358  Q
    |||||||| ||||    
T  1758458 tctctttcatctc 1758446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 8956762 - 8956867
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| ||||| ||||||||||| |  |||||||||||| |||||  ||||| ||| ||||||||||| | |||||||||| || |    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcc 8956861  T
Q  348 tctttc 353  Q
    ||||||    
T  8956862 tctttc 8956867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 36331478 - 36331407
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggt 319  Q
    ||||||||||||||| |||||||||| ||||||| |||| ||||||| ||||||||||| ||| ||||||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgtggt 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 35093585 - 35093688
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||| |||||||||||| | ||||||| ||||||| |  |||||| |||| |||||| |||||||||||||||||| || |   ||||||||| ||||    
T  35093585 gagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactttc 35093684  T
Q  348 tctt 351  Q
    ||||    
T  35093685 tctt 35093688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 25395429 - 25395328
Alignment:
Q  252 tatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctt 351  Q
    ||||||||||| ||| ||||| ||||| ||||| | ||| | ||||||||||||| |||||||||||  || | |||||  ||||| |||||||||||||    
T  25395429 tatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtggctatatagaccccacacaaacacattttctctt 25395330  T
Q  352 tc 353  Q
    ||    
T  25395329 tc 25395328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 36707524 - 36707459
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgaca 313  Q
    |||| |||||||||||| ||||||||||| |||||||||  |||||| ||||||||||| ||||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgaca 36707459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 25407243 - 25407137
Alignment:
Q  253 atgatacatagacacccttaggtggcaatacacctcttgacacccacac-aaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctt 351  Q
    |||||||||| ||| || |||||||||||| ||| |||||||| ||||| ||||| |||||| ||| |||| |||| ||  ||||| |||| ||||||||    
T  25407243 atgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctctt 25407144  T
Q  352 tcctctc 358  Q
    || ||||    
T  25407143 tcatctc 25407137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 4190191 - 4190242
Alignment:
Q  266 acccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||| ||||||||||||||||| ||||||||||||||  |||||||||||    
T  4190191 acccttatgtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 4190242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 9434290 - 9434247
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  9434290 gtggcaatacacctctt-acacccacacaaaattctgacatgtgg 9434247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 6034044 - 6034154
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||| ||||| || ||||||||||| ||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  6034144 tcttttctctc 6034154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 41236347 - 41236457
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  41236447 tcttttctctc 41236457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 50052528 - 50052418
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  50052428 tctttcctctc 50052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 19670816 - 19670711
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 19670717  T
Q  348 tctttc 353  Q
    ||||||    
T  19670716 tctttc 19670711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 32766958 - 32767063
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||| ||||||||||||||| ||| ||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttc 32767057  T
Q  348 tctttc 353  Q
    ||||||    
T  32767058 tctttc 32767063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 48183149 - 48183039
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||| |||||||||||||  |||||||||||||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 48183050  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  48183049 tcttttctctc 48183039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 11511562 - 11511453
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  348 tctttcctct 357  Q
    ||||| ||||    
T  11511462 tcttttctct 11511453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 47986208 - 47986313
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 47986307  T
Q  348 tctttc 353  Q
    ||||||    
T  47986308 tctttc 47986313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 50813992 - 50813887
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| |||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| || |||| ||||||| ||| ||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttc 50813893  T
Q  348 tctttc 353  Q
    ||||||    
T  50813892 tctttc 50813887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 55475191 - 55475296
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||| |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||| ||||||||||| ||| ||| ||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttc 55475290  T
Q  348 tctttc 353  Q
    ||||||    
T  55475291 tctttc 55475296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 55079815 - 55079732
Alignment:
Q  247 ggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccc 330  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||    
T  55079815 ggagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggaccc 55079732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 480547 - 480437
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||| || |||| |||||||| | ||||||||| ||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  480447 tcttttctctc 480437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 29239886 - 29239996
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||| ||||||||||| || ||| || |||| ||||||||  |||||||||| ||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  29239986 tctttcctctc 29239996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 17983825 - 17983738
Alignment:
Q  266 acccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 17983738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 42044467 - 42044357
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttg-acacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacatttt 346  Q
    |||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||| |||||| || |||| |||||||| ||||||||||| |||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatc-cttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 42044369  T
Q  347 ctctttcctctc 358  Q
    |||||| |||||    
T  42044368 ctcttttctctc 42044357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 54473633 - 54473523
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||| || ||| || |||| |||||||| ||||||||||| |||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  54473533 tcttttctctc 54473523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 356
Target Start/End: Original strand, 3481654 - 3481762
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||||| ||||||||||||||||   |||||||||||||||||| ||||||  | |||| ||||||||  |||||||||| ||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  348 tctttcctc 356  Q
    |||||||||    
T  3481754 tctttcctc 3481762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 24995207 - 24995097
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||| || ||||||||||| ||||||||||||  |||||||||||| |||||  ||||| || |||| |||||||| ||||||||||||||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttc 24995108  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  24995107 tcttttctctc 24995097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 28480368 - 28480258
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||| |||| |||||||||| ||||||||| |||||||||||||  ||||| |||| ||||    
T  28480368 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttc 28480269  T
Q  348 tctttcctctc 358  Q
    || ||| ||||    
T  28480268 tccttcatctc 28480258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 28481243 - 28481133
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||| |||| |||||||||| ||||||||| |||||||||||||  ||||| |||| ||||    
T  28481243 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttc 28481144  T
Q  348 tctttcctctc 358  Q
    || ||| ||||    
T  28481143 tccttcatctc 28481133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 28482118 - 28482008
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||| |||| |||||||||| ||||||||| |||||||||||||  ||||| |||| ||||    
T  28482118 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttc 28482019  T
Q  348 tctttcctctc 358  Q
    || ||| ||||    
T  28482018 tccttcatctc 28482008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 29234345 - 29234235
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| ||||||||||||||||||||| ||||||||||||  |||| |||  |||||||| |||||| || |||| |||||||| ||||||||||| ||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  29234245 tcttttctctc 29234235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 48647826 - 48647716
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||| ||||| ||| ||||||||  ||||||||||||| ||||||||| ||||| || ||| ||||||| |||||| | ||||||||||| ||||    
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttc 48647727  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  48647726 tctttcctctc 48647716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 50526271 - 50526161
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||| ||||||| |||||  | ||||||||||  ||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  348 tctttcctctc 358  Q
    | |||||||||    
T  50526171 tatttcctctc 50526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 29548059 - 29547954
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||| ||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||| |||| || ||| ||| ||| |||     
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttt 29547960  T
Q  348 tctttc 353  Q
    ||||||    
T  29547959 tctttc 29547954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 31910192 - 31910302
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||| ||||||||| ||||||||   |||||||||||||||||| ||||||  | | ||  ||||||| ||||||||||| ||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  31910292 tcttttctctc 31910302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 29977885 - 29977990
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||| | | || |||||||||||||||| ||| ||||||||||||||| |||||| || ||||| |||||||  |||||||||| ||||    
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttc 29977984  T
Q  348 tctttc 353  Q
    ||||||    
T  29977985 tctttc 29977990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 44536845 - 44536741
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||||  ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| | |||||  || ||| ||| ||||    
T  44536845 gagttatgatacataaacacttttaggtggcaatacacc-cttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacactttc 44536747  T
Q  348 tctttc 353  Q
    ||||||    
T  44536746 tctttc 44536741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 8343263 - 8343158
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||| ||| ||||||||||||||||| |  |||||||| ||| ||||| ||||||||||| ||| ||||||| ||| ||| | | ||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  348 tctttc 353  Q
    ||||||    
T  8343163 tctttc 8343158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 18924595 - 18924490
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||||||| |||| | ||||||||||||||||||||| ||||| | ||||||||||| |||||||||||  || || || | ||||||| ||| ||||    
T  18924595 gagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacactttc 18924496  T
Q  348 tctttc 353  Q
    ||||||    
T  18924495 tctttc 18924490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 29589831 - 29589735
Alignment:
Q  256 atacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    ||||||| |||||||||| || ||||||||| ||||||||||||||||||| |||| |||||| ||| |||||||  |||||| ||| ||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttc 29589735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 40574779 - 40574844
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgaca 313  Q
    ||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||| ||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 40574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 352
Target Start/End: Original strand, 23608235 - 23608339
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||| |||||||||||||| || |||||||||  |||||||||||||||||| |||||| || |||| ||| || |  |||||||||| ||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttc 23608334  T
Q  348 tcttt 352  Q
    |||||    
T  23608335 tcttt 23608339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 56300224 - 56300155
Alignment:
Q  289 ttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctc 358  Q
    |||||| ||||||||||| ||||||||||||||| || | ||||||||| |||| |||||||||||||||    
T  56300224 ttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctc 56300155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 366
Target Start/End: Original strand, 41823926 - 41824000
Alignment:
Q  292 acacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctcttcatctc 366  Q
    ||||||||||||||| |||||| || ||||  ||||||| ||||||||||| ||||||||| |||||||| ||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctcttcttctc 41824000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 358
Target Start/End: Complemental strand, 53352661 - 53352556
Alignment:
Q  252 tatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctt 351  Q
    |||||||||||||||||||||||| ||||||||    || ||||| ||||||||| |||||| || || | |||||||| ||||||||| | ||||||||    
T  53352661 tatgatacatagacacccttaggt-gcaatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctctt 53352563  T
Q  352 tcctctc 358  Q
    | |||||    
T  53352562 ttctctc 53352556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 18769103 - 18769037
Alignment:
Q  292 acacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctc 358  Q
    ||||||||||||||| |||||||||||||||||  | ||  ||||| ||||||||||||||| ||||    
T  18769103 acacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcatctc 18769037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 18769153 - 18769219
Alignment:
Q  292 acacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttcctctc 358  Q
    ||||||||||||||| |||||| ||||||||||  ||||  |||||  |||||||||||||| ||||    
T  18769153 acacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctctttcatctc 18769219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 29535377 - 29535435
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaa 306  Q
    |||||||||||||||||||  |||||||| ||||||| ||||||  | |||||||||||    
T  29535377 gagttatgatacatagacaatcttaggtgacaatacatctcttggtatccacacaaaaa 29535435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 712126 - 712083
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  712126 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 712083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 19880120 - 19880077
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  19880120 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 19880077  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 35037171 - 35037128
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  35037171 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 35037128  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 55272310 - 55272353
Alignment:
Q  274 gtggcaatacacctcttgacacccacacaaaaagctgacatgtgg 318  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  55272310 gtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 55272353  T

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Target: scaffold0018 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 353
Target Start/End: Original strand, 152514 - 152603
Alignment:
Q  264 acacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttctctttc 353  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| || ||||||  ||| ||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttc 152603  T

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Target: scaffold0316 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 357
Target Start/End: Original strand, 17058 - 17163
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||||||||| ||||||||    ||||| |||||||| | || |||| ||||||||||| ||||||||||||||  ||||||| ||||||||||||||||    
T  17058 gagttatgattcatagaca----taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttc 17153  T
Q  348 tctttcctct 357  Q
    ||||||||||    
T  17154 tctttcctct 17163  T

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Target: scaffold0237 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 357
Target Start/End: Original strand, 4027 - 4138
Alignment:
Q  246 tggagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattt 345  Q
    |||||| |||||||||||||||| |||| ||||||||||||| || ||||||||||||||| |||||| || || | ||||| || ||| ||||||| ||    
T  4027 tggagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactt 4126  T
Q  346 tctctttcctct 357  Q
    ||||||| ||||    
T  4127 tctcttttctct 4138  T

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Target: scaffold1268 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 1029 - 919
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| | |||||||||||||||||  || ||| ||||||||||| |||||| || |||| ||| | || ||||||||||| ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  929 tctttcctctc 919  T

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Target: scaffold1267 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 1029 - 919
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    |||| |||||||||||||| | |||||||||||||||||  || ||| ||||||||||| |||||| || |||| ||| | || ||||||||||| ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  348 tctttcctctc 358  Q
    |||||||||||    
T  929 tctttcctctc 919  T

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Target: scaffold0321 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 10209 - 10099
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||||||||||||| ||||||||||||||| |  |||||| ||||| ||||| |||||| || |||| |||||||  | ||||||||| ||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttc 10110  T
Q  348 tctttcctctc 358  Q
    ||||| |||||    
T  10109 tcttttctctc 10099  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 356
Target Start/End: Complemental strand, 8963 - 8855
Alignment:
Q  248 gagttatgatacatagacacccttaggtggcaatacacctcttgacacccacacaaaaagctgacatgtggtcatgtggaccctgcacaagcacattttc 347  Q
    ||||||||||| ||||||| ||||| ||| ||||||||   |||||| | |||||||||  |||||  | |||| ||||||||  |||||| ||||||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  348 tctttcctc 356  Q
    |||||||||    
T  8863 tctttcctc 8855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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