View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0645_high_8 (Length: 444)
Name: NF0645_high_8
Description: NF0645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0645_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 30 - 303
Target Start/End: Complemental strand, 31802056 - 31801785
Alignment:
| Q |
30 |
acaaccacaccggaataaattatcatagcaagtaaaagggttacttatcacaaatcctattcatatggaactaccagaagtccagaactcattttactca |
129 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
31802056 |
acaaccacaccggaataaattatcataggaagtaaaagggttacttgtcacaaatcctattcgtatggaactaccagaagtccagaactcattttactca |
31801957 |
T |
|
| Q |
130 |
tagaatcacccattagaattagaaaatgcataactatcaaacaaaagaaggnnnnnnnnnctattttcatcccatgaggaaccttaccctttattcaatt |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
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| T |
31801956 |
tagaatcacccattagaattagaaaatgcataactatcaaacaaaagaa-gaaaaaaaaactattttcatcccatgaggaaccttaccctttattcaatt |
31801858 |
T |
|
| Q |
230 |
tccaaaacaaaacacacaataagacttaactggttccactagaacatgcatatttgttttaaacatgttaacca |
303 |
Q |
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|||||||||||| |||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| |
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| T |
31801857 |
tccaaaacaaaatacacaataagactt-attgattccactagaacatgcatatttgttttaaacatgttaacca |
31801785 |
T |
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