View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0645_low_30 (Length: 370)
Name: NF0645_low_30
Description: NF0645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0645_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 28 - 357
Target Start/End: Complemental strand, 28669346 - 28669015
Alignment:
| Q |
28 |
aggtgttgataaggacatgttaatccataaaaataaaaataaagttagaaaatttctgactattcaaagatcataccattcaatcccaacggttgcattg |
127 |
Q |
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| T |
28669346 |
aggtgttgataaggacatgttaatccataaaaataaaaataaagttataaaatttctgactattcaaagatcataccattcaatcccaacggttgcattg |
28669247 |
T |
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| Q |
128 |
tctgtcctaagatcatgtcatggccgttagattatcatcaaacgtgtctttgccgttgttgacagagaaaaataacacannnnnnnacagagagaatctt |
227 |
Q |
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| T |
28669246 |
tctgtcctaagatcatgttatggccgttagattatcatcaaacgtgtctttgccgttgttgacagagaaaaataacacatttttttacagagagaatctt |
28669147 |
T |
|
| Q |
228 |
tgtgagacaacaaccctgacacattcattatcttagcatttctagagagagagnnnnnnn--cagttcaaagtttgttttttgaaattgtgtatgtgaaa |
325 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
28669146 |
tgtgagacaacaaccctgacacattcattatcttagcatttctagagagagagagaaaaaaacagttcaaagtttgttttttgaaattgtgtatgtgaaa |
28669047 |
T |
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| Q |
326 |
ctcaaactgtgcatgtttttatcttacacttc |
357 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
28669046 |
ctcaaactgtgcatgtttttatcttacacttc |
28669015 |
T |
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