View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0645_low_67 (Length: 214)
Name: NF0645_low_67
Description: NF0645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0645_low_67 |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 29662123 - 29662315
Alignment:
| Q |
1 |
ctttctcttgcttgctactgccaccacctgtagtaccctttgcacctgtagctgcaaagactcttcctgttgttggaaccattggcaacatggtgataga |
100 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
29662123 |
ctttctcttgcttgctactgccaccacctgtagtaccctttgcacctgtagctgcaaagactcttcccgttgttggaaccattggcaacatggtgataga |
29662222 |
T |
|
| Q |
101 |
agccattaattctcctagcttaatttgaaaaattatatcaactag-aaactaaaatataatataaattctctttgcctagtgttattgatgat |
192 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29662223 |
agccattaattctcctagcttaatttgaaaaattatatcaactagaaaactaaaatataatataaattctctttgcctagtgttattgatgat |
29662315 |
T |
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