View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0647_high_2 (Length: 481)
Name: NF0647_high_2
Description: NF0647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0647_high_2 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 441; Significance: 0; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 1 - 452
Target Start/End: Original strand, 6275732 - 6276184
Alignment:
| Q |
1 |
agcttgctttcttgtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6275732 |
agcttgctttcttgtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagt |
6275831 |
T |
|
| Q |
101 |
gttcaactcttcttgtctatagtagactaatggaggtggtgtttcacttggaagatatgtctatatttatattttagttaatagtgtcaaattttggaaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6275832 |
gttcaactcttcttgtctatagtagactaatggaggtggtgtttcacttggaagatatgtctatatttatattttagttaatagtgtcaaattttggaaa |
6275931 |
T |
|
| Q |
201 |
atgtaagatatttaagatgtaagataaatatgata-tttttgataattaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaa |
299 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6275932 |
atgtaagatatttaagatgtaagataaatttgatattttttgataattaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaa |
6276031 |
T |
|
| Q |
300 |
tccatgagttgcaaacaaagttgatggttccatggttaggaatatcttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatata |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6276032 |
tccatgagttgcaaacaaagttgatggttccatggttaggaatatcttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatata |
6276131 |
T |
|
| Q |
400 |
aaatgctcctggaattcccatctcactatcccattcaaaatgaactttgtatg |
452 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6276132 |
aaatgctcctggaattcccatctcactatcccattcaaaatgaactttgtatg |
6276184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 1 - 444
Target Start/End: Original strand, 6333160 - 6333601
Alignment:
| Q |
1 |
agcttgctttcttgtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagt |
100 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||| ||||| || |||||||||||||||||||| |
|
|
| T |
6333160 |
agctttctttcttgtcaggatcacccaagtcattgtaaacatcgtagtcatagatcctatccgattctttgcgctcacccgttccatctcctcttaaagt |
6333259 |
T |
|
| Q |
101 |
gttcaactcttcttgtctatagtagactaatggaggtggtgtttcacttggaagatatgtctatatttatattttagttaatagtgtcaaattttggaaa |
200 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||| ||||||||| |||||||| || |||||||||||||||| | ||| ||||||||||||| || |
|
|
| T |
6333260 |
cttcaattcttcttgtctgtagtagactaatggagctggtgtttcgcttggaaggtacgtctatatttatattt-atttatcggtgtcaaattttgagaa |
6333358 |
T |
|
| Q |
201 |
atgtaagatatttaag-atgtaagataaatatgatatttttgataattaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaa |
299 |
Q |
| |
|
|| ||| | | | || |||| | | ||||||||| ||||| | ||||||||||| | |||||| ||||||| ||||| |||||| | |||||||| |
|
|
| T |
6333359 |
atataatttgtattagcatgttaaagaaatatgattttttt--tcattaccttgttcgtaaagaagatgcgtttcgttttatactttttagcattgtaaa |
6333456 |
T |
|
| Q |
300 |
tccatgagttgcaaacaaagttgatggttccatggttaggaatatcttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatata |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
6333457 |
tccatgagttgcaaacaaagttgatggttccatggatgggaatatcttcaagcgtcaaacttacaaggaagaattctcctagcatgaaattttcaatata |
6333556 |
T |
|
| Q |
400 |
aaatgctcctggaattcccatctcactatcccattcaaaatgaac |
444 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6333557 |
aaatgctcctggaattcccatctcactgtcccattcaaaatgaac |
6333601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 14 - 444
Target Start/End: Original strand, 6290497 - 6290924
Alignment:
| Q |
14 |
gtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttct |
113 |
Q |
| |
|
|||||| ||||| | |||||||||||||||||| ||||| || ||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
6290497 |
gtcaggctcacctaaatcattgtagacatcgtaatcatatattctttcccattccttgcgctctcctgttccatctcctcttaaagtcttcaattcttct |
6290596 |
T |
|
| Q |
114 |
tgtctatagtagactaatggaggtggtgtttcacttggaagatatgtctatatttatattttagttaatagtgtcaaattttggaaaatgtaag--atat |
211 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||||||| ||||||||||||| || | | | | |||||| ||||||| || | || |||| |
|
|
| T |
6290597 |
tgtctatagtacactaatggagctggtgtttcacttggaaggtatgtctatattt-taaatcatatgaaggtgtcagattttgggaactatagtttatat |
6290695 |
T |
|
| Q |
212 |
ttaagatgtaagataaatatgatatttttgataattaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaatccatgagttgc |
311 |
Q |
| |
|
|||| ||| |||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||| |
|
|
| T |
6290696 |
ttaacatgcaagataaatatggtatattc----attaccttgttggcaaagaagatgcgttcagttttgtagttttgagcattgtaaatccatgagttgc |
6290791 |
T |
|
| Q |
312 |
aaacaaagttgatggttccatggttaggaatatcttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatataaaatgctcctgg |
411 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||||| || |||||||||||||||||||||| | || || ||||| |||||||||||||||||| |
|
|
| T |
6290792 |
aaacaaagttgatggttccatggttgggaacatcttcaagggtcaaacttacaagaaagaattctctttgcttgcgattcttaatataaaatgctcctgg |
6290891 |
T |
|
| Q |
412 |
aattcccatctcactatcccattcaaaatgaac |
444 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||| |
|
|
| T |
6290892 |
aattcccatgtcactatcccatttaaaatgaac |
6290924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 14 - 444
Target Start/End: Original strand, 6425279 - 6425704
Alignment:
| Q |
14 |
gtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttct |
113 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
6425279 |
gtcaggctcacccaaatcattgtagacatcgtaatcatagatcctttcccattccttgcgctctccttttccatctcctcttaaagtcttcaactcttct |
6425378 |
T |
|
| Q |
114 |
tgtctatagtagactaatggaggtggtgtttcacttggaagatatgtctatatttatattttagttaatagtgtcaaattttggaaaatgtaagatattt |
213 |
Q |
| |
|
||||||||||| || ||||||| ||||||||||||||||| |||||||| ||||||| |||| ||||| |||||| ||||| |||| ||| || |
|
|
| T |
6425379 |
tgtctatagtacaccaatggagccggtgtttcacttggaaggtatgtctacatttata-tttacttaatcatgtcaagttttgagaaataatttatactt |
6425477 |
T |
|
| Q |
214 |
aagatgtaagataaatatgatatttttgataattaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaatccatgagttgcaa |
313 |
Q |
| |
|
|| | | |||||||||| ||| | |||||||||| || || || ||||| ||| ||||||| ||| |||||||| ||| ||||||||| |
|
|
| T |
6425478 |
aactagacaaataaatatgagtttt----tctttaccttgttagcgaaaaagatgcggtcacttttgtattttttgtcattgtaaacccaagagttgcaa |
6425573 |
T |
|
| Q |
314 |
acaaagttgatggttccatggttaggaatatcttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatataaaatgctcctggaa |
413 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||| ||||| ||||| ||||| || | ||| |||||||||||||| ||||||||||||| |
|
|
| T |
6425574 |
acaaagttgatggttccatggtttggaacatcttcaagtgtcaaactcacaaggaagaactcatgttgcaaaaaattctcaatatagaatgctcctggaa |
6425673 |
T |
|
| Q |
414 |
ttcccatctcactatcccattcaaaatgaac |
444 |
Q |
| |
|
||||||| ||||| |||||||||||||||| |
|
|
| T |
6425674 |
ttcccatgtcactgccccattcaaaatgaac |
6425704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 6371291 - 6371472
Alignment:
| Q |
12 |
ttgtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactctt |
111 |
Q |
| |
|
||||| || ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||||||| |||||||||| |
|
|
| T |
6371291 |
ttgtctggttcacccaaatcattgtagacatcgtagtcatagatcctatcccattctttgcgctcacccgttccatctcctcttaaagtcttcaactctt |
6371390 |
T |
|
| Q |
112 |
cttgtctatagtagactaatggaggtggtgtttcacttggaagatatgtctatatttatattttagttaatagtgtcaaattttg |
196 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||| |||| |||||||| |||| ||||| || |||||||||||||||| |
|
|
| T |
6371391 |
cttgtctgtagtagactaatggagctggtgtttcacttagaaggtatgtctacattt---ttttatttcatagtgtcaaattttg |
6371472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 245 - 443
Target Start/End: Original strand, 6322952 - 6323150
Alignment:
| Q |
245 |
attaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaatccatgagttgcaaacaaagttgatggttccatggttaggaatat |
344 |
Q |
| |
|
|||||||||||||| ||||| ||||||| ||||| ||||| | | ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
6322952 |
attaccttgttggcgaagaagatgcgtttcgttttatacttgtcagcactgtaaatccatgagttgcatacaaagttgatggttccatggtttggaatat |
6323051 |
T |
|
| Q |
345 |
cttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatataaaatgctcctggaattcccatctcactatcccattcaaaatgaa |
443 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||| | |||| | |||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |
|
|
| T |
6323052 |
cttcaagtgtcaaacttacaaggaagaattctcgtgtcatgttactctcaatataaaatgctcctggaactcccatgtcactattccattcaaaatgaa |
6323150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 246 - 443
Target Start/End: Original strand, 7460971 - 7461168
Alignment:
| Q |
246 |
ttaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaatccatgagttgcaaacaaagttgatggttccatggttaggaatatc |
345 |
Q |
| |
|
||||||||||||||||||| ||||| || |||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
7460971 |
ttaccttgttggcaaagaagatgcggtccgttttgtactttttagaattgtgaatccatgagttgcaaacaaagttgatggttccatggtttggaacatc |
7461070 |
T |
|
| Q |
346 |
ttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatataaaatgctcctggaattcccatctcactatcccattcaaaatgaa |
443 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| ||| |||| | || ||||||||||| ||||||||||||||||| ||| ||||||| |||||||| |
|
|
| T |
7461071 |
ttcaagtgtcaaactcacaaggaagaattcaccttgcatatagttatcaatataaaaagctcctggaattcccatggtactgtcccattgaaaatgaa |
7461168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 246 - 443
Target Start/End: Original strand, 6353961 - 6354158
Alignment:
| Q |
246 |
ttaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaatccatgagttgcaaacaaagttgatggttccatggttaggaatatc |
345 |
Q |
| |
|
||||||||||||||||||| ||||| || |||||||||||| | |||||||||||||||||||||| ||||||| ||||| ||||||||| |||| ||| |
|
|
| T |
6353961 |
ttaccttgttggcaaagaagatgcggtcggttttgtactttttagaattgtaaatccatgagttgcagacaaagtggatggatccatggtttggaacatc |
6354060 |
T |
|
| Q |
346 |
ttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatataaaatgctcctggaattcccatctcactatcccattcaaaatgaa |
443 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| ||| |||| ||||| || || ||||| ||||| ||||||||||| | ||| |||||||||||||||| |
|
|
| T |
6354061 |
ttcaagtgtcaaactcacaaggaagaattcaccttgcataaaattatcgatgtaaaaagctccgggaattcccatgttactgtcccattcaaaatgaa |
6354158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 6364468 - 6364611
Alignment:
| Q |
20 |
atcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttcttgtcta |
119 |
Q |
| |
|
|||||||| ||||||||||||||| || ||||| || ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
6364468 |
atcacccaaatcattgtagacatcataatcatatattctttcccattccttacgctctccagttccatctcctcttaaagtcttcaattcttcttgtctg |
6364567 |
T |
|
| Q |
120 |
tagtagactaatggaggtggtgtttcacttggaagatatgtcta |
163 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||| |||||||| |
|
|
| T |
6364568 |
tagtagactaaaggagctggtgtttcacttggaaggtatgtcta |
6364611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 6353589 - 6353738
Alignment:
| Q |
14 |
gtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttct |
113 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| ||||| || ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
6353589 |
gtcaggctcacccaaatcattgtagacatcgtaatcatatattctttcccattccttgcgctctccagttccatctcctcttaaagtcttcaattcttct |
6353688 |
T |
|
| Q |
114 |
tgtctatagtagactaatggaggtggtgtttcacttggaagatatgtcta |
163 |
Q |
| |
|
||||| ||||| |||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
6353689 |
tgtctgtagtacactaatggagccggtgtttcacttggaaggtatgtcta |
6353738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 6322603 - 6322766
Alignment:
| Q |
11 |
cttgtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactct |
110 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||| || || ||| || |||| || |||||||||||||||||||| ||||| ||| |
|
|
| T |
6322603 |
cttgtcaggatcacccaagtcattgtaaacatcgtagtcatagattctatcgtgttccttgcgctgacccgttccatctcctcttaaagtcttcaattct |
6322702 |
T |
|
| Q |
111 |
tcttgtctatagtagactaatggaggtggtgtttcacttggaagatatgtctatatttatattt |
174 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
6322703 |
tcttctctatagtagactaatggagctggtgtttcacttggaaggtatgtctatatttttattt |
6322766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7460648 - 7460810
Alignment:
| Q |
1 |
agcttgctttcttgtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagt |
100 |
Q |
| |
|
|||| ||||||| ||| |||||||||| |||||||||||||| || ||||| || || |||||||| || |||||||| |||||||||||||||||||| |
|
|
| T |
7460648 |
agctagctttctggtcgggatcacccaagtcattgtagacatcataatcatatattctgtcccattccttgcgctctcccgttccatctcctcttaaagt |
7460747 |
T |
|
| Q |
101 |
gttcaactcttcttgtctatagtagactaatggaggtggtgtttcacttggaagatatgtcta |
163 |
Q |
| |
|
||||| ||||||||||| ||||| |||||||||| ||||||| |||||||||| |||||||| |
|
|
| T |
7460748 |
cttcaattcttcttgtctgtagtacactaatggagctggtgttgcacttggaaggtatgtcta |
7460810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 246 - 438
Target Start/End: Original strand, 6364716 - 6364911
Alignment:
| Q |
246 |
ttaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaatccatgagttgcaaacaaagttgatggttccatggttaggaatatc |
345 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
6364716 |
ttaccttgttggcaaagaaaatgcgtttagttttgtaatttttagcgttgtaaacccatgagttgcaaacaaagttgatggttccatggtttggaacatc |
6364815 |
T |
|
| Q |
346 |
ttcaagtgttaaacttacaagaaagaatt---ctcctagcatgaaattctcaatataaaatgctcctggaattcccatctcactatcccattcaaa |
438 |
Q |
| |
|
|||||| || || || ||||| ||||||| | ||| ||| |||||||||||||||| ||||||||| ||||||| ||| | ||||||||||| |
|
|
| T |
6364816 |
ttcaagagtcaagctgacaaggaagaattcaccaccttgcagataattctcaatataaaaagctcctggagttcccatgtcattgtcccattcaaa |
6364911 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 6392094 - 6392230
Alignment:
| Q |
23 |
acccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttcttgtctatag |
122 |
Q |
| |
|
||||| ||||||||||||||| || ||||| || || |||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||| |
|
|
| T |
6392094 |
acccaaatcattgtagacatcataatcatatattctgtcccattccttacgctctccagttccatctcctcttaaagtattcaattcttcttgtctgtag |
6392193 |
T |
|
| Q |
123 |
tagactaatggaggtggtgtttcacttggaagatatg |
159 |
Q |
| |
|
|| | |||||||| ||||||||| ||| |||| |||| |
|
|
| T |
6392194 |
tacagtaatggagctggtgtttcccttagaaggtatg |
6392230 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 245 - 420
Target Start/End: Original strand, 6392436 - 6392611
Alignment:
| Q |
245 |
attaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaatccatgagttgcaaacaaagttgatggttccatggttaggaatat |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||| ||||| ||||| | || || |
|
|
| T |
6392436 |
attaccttgttggcaaagaaaatgcgttcagtttggtacttttcagcattgtaaatccatgagttgcaaataaagtttgtggtttcatggctttcaacat |
6392535 |
T |
|
| Q |
345 |
cttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatataaaatgctcctggaattcccat |
420 |
Q |
| |
|
||||||| || ||||| ||||| |||| ||| || || | ||||||| || ||| || ||||||||||||||||| |
|
|
| T |
6392536 |
cttcaagggtcaaactcacaaggaagatttcatcttgcgtaaaattcttaacatagaaagctcctggaattcccat |
6392611 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 245 - 420
Target Start/End: Original strand, 6411576 - 6411751
Alignment:
| Q |
245 |
attaccttgttggcaaagaaaatgcgttcagttttgtactttcgacaattgtaaatccatgagttgcaaacaaagttgatggttccatggttaggaatat |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||| ||||| ||||| | || || |
|
|
| T |
6411576 |
attaccttgttggcaaagaaaatgcgttcagtttggtacttttcagcattgtaaatccatgagttgcaaataaagtttgtggtttcatggctttcaacat |
6411675 |
T |
|
| Q |
345 |
cttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaatataaaatgctcctggaattcccat |
420 |
Q |
| |
|
||||||| || ||||| ||||| |||| ||| || || | ||||||| || ||| || ||||||||||||||||| |
|
|
| T |
6411676 |
cttcaagggtcaaactcacaaggaagatttcatcttgcgtaaaattcttaacatagaaagctcctggaattcccat |
6411751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 6264917 - 6265057
Alignment:
| Q |
11 |
cttgtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactct |
110 |
Q |
| |
|
|||||| || ||||||| ||||||||| ||||| || ||||| | || ||||||||||| ||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
6264917 |
cttgtcggggtcacccaaatcattgtaaacatcataatcataaactctgtcccattctttgcgctcccccgttccatctcctcttaaagtcttcaactct |
6265016 |
T |
|
| Q |
111 |
tcttgtctatagtagactaatggaggtggtgtttcacttgg |
151 |
Q |
| |
|
||||||||||||||| | ||||| |||||||||||||| |
|
|
| T |
6265017 |
aattgtctatagtagacaagtggagcaggtgtttcacttgg |
6265057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 6411258 - 6411394
Alignment:
| Q |
23 |
acccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttcttgtctatag |
122 |
Q |
| |
|
||||| ||||||||||||||| || ||||| || || |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||||| | ||| |
|
|
| T |
6411258 |
acccaaatcattgtagacatcataatcatatattctgtcccataccttacgctctccagttccatctcctcttaaagtcttcaattcttctttgatgtag |
6411357 |
T |
|
| Q |
123 |
tagactaatggaggtggtgtttcacttggaagatatg |
159 |
Q |
| |
|
|| |||||||| |||||| || ||||||||| |||| |
|
|
| T |
6411358 |
tacactaatggttgtggtgcttgacttggaaggtatg |
6411394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 6458303 - 6458400
Alignment:
| Q |
65 |
ttctttacgctctcctgttccatctcctcttaaagtgttcaactcttcttgtctatagtagactaatggaggtggtgtttcacttggaagatatgtct |
162 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| ||| | ||||||||||| |||||| | |||||||| |||||||| |||||||||||| |||| |
|
|
| T |
6458303 |
ttctttgcgctctccagttccatctcctcttagagtctgcaactcttcttctctataatgatttaatggagctggtgtttgacttggaagatacgtct |
6458400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 6452174 - 6452302
Alignment:
| Q |
29 |
atcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttcttgtctatagtagact |
128 |
Q |
| |
|
|||||| || ||||| || || || ||||| ||||||||||| || ||||| |||||||||||||||| | | | ||||||||||| |||| ||| | |
|
|
| T |
6452174 |
atcattataaacatcataatcgtatatcctatcccattctttgcgttctccggttccatctcctcttagattctgcaactcttcttctctaaagtgattt |
6452273 |
T |
|
| Q |
129 |
aatggaggtggtgtttcacttggaagata |
157 |
Q |
| |
|
||||||| |||||||| |||||||||||| |
|
|
| T |
6452274 |
aatggagctggtgtttgacttggaagata |
6452302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 371
Target Start/End: Original strand, 6371579 - 6371658
Alignment:
| Q |
292 |
attgtaaatccatgagttgcaaacaaagttgatggttccatggttaggaatatcttcaagtgttaaacttacaagaaaga |
371 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| || |||| ||| | ||| || ||||| ||||| |||| |
|
|
| T |
6371579 |
attgtaaatccatgagttgcagttaaagttgatggttccatgatttggaacatcattaagggtcaaactcacaaggaaga |
6371658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 42694396 - 42694526
Alignment:
| Q |
29 |
atcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttcttgtctatagtagact |
128 |
Q |
| |
|
||||||||||||||| || |||||||| |||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||| |||||| | |||| |
|
|
| T |
42694396 |
atcattgtagacatcataatcatagattctttcccattctttgcgttctcctgttccatctcctcttaaattgttcaattcttcttctctataatggact |
42694495 |
T |
|
| Q |
129 |
aatggaggtggtgtttcacttggaagatatg |
159 |
Q |
| |
|
||||||| ||||||||||| |||||||||| |
|
|
| T |
42694496 |
aatggagccggtgtttcactaggaagatatg |
42694526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 42687261 - 42687133
Alignment:
| Q |
29 |
atcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttcttgtctatagtagact |
128 |
Q |
| |
|
|||||||||||||||||| || ||||||||||| | || |||||||||||||||||||| |||||| | | ||| ||||||| |||||| | |||| |
|
|
| T |
42687261 |
atcattgtagacatcgtaatcgtagatcctttcatgtaacttgcgctctcctgttccatctccccttaaattttgcaattcttcttctctatacttgact |
42687162 |
T |
|
| Q |
129 |
aatggaggtggtgtttcacttggaagata |
157 |
Q |
| |
|
| ||||| ||||||||||||||||||||| |
|
|
| T |
42687161 |
agtggagatggtgtttcacttggaagata |
42687133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 443
Target Start/End: Original strand, 42694743 - 42694890
Alignment:
| Q |
296 |
taaatccatgagttgcaaacaaagttgatggttccatggttaggaatatcttcaagtgttaaacttacaagaaagaattctcctagcatgaaattctcaa |
395 |
Q |
| |
|
|||||||| |||||||| ||||||| |||| ||||||| || ||||| |||||||| || ||||| ||||| || || || | |||| || |||| | |
|
|
| T |
42694743 |
taaatccaggagttgcatacaaagtagatgcttccatgatttggaatgtcttcaagagtcaaactcacaaggaaaaactcagtttgcataaagttcttga |
42694842 |
T |
|
| Q |
396 |
tataaaatgctcctggaattcccatctcactatcccattcaaaatgaa |
443 |
Q |
| |
|
| ||||||||||| ||||||||||| ||| ||||||||||||||||| |
|
|
| T |
42694843 |
tgtaaaatgctccaggaattcccatgtcatcatcccattcaaaatgaa |
42694890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 9603179 - 9603035
Alignment:
| Q |
18 |
ggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagtgttcaactcttcttgtc |
117 |
Q |
| |
|
|||||||| | ||||||||||||||| || ||||| | |||||||||||||| || | ||| || ||||||||||||| | | | ||| |||||||||| |
|
|
| T |
9603179 |
ggatcaccaagatcattgtagacatcataatcataaactctttcccattcttttcgttgtccagtaccatctcctcttagattttgcaattcttcttgtc |
9603080 |
T |
|
| Q |
118 |
tatagtagactaatggaggtggtgtttcacttggaagatatgtct |
162 |
Q |
| |
|
| |||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
9603079 |
tgtagtagactaatggagctggtgtttgacttggaagatatgtct |
9603035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 36744021 - 36743945
Alignment:
| Q |
24 |
cccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaaagt |
100 |
Q |
| |
|
|||| ||||||||| ||||| || |||||||| || |||||||| | ||||| | ||||||||||||| |||||||| |
|
|
| T |
36744021 |
cccaaatcattgtaaacatcataatcatagattctgtcccattcctcacgctttgctgttccatctccccttaaagt |
36743945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 35722388 - 35722304
Alignment:
| Q |
13 |
tgtcaggatcacccacatcattgtagacatcgtagtcatagatcctttcccattctttacgctctcctgttccatctcctcttaa |
97 |
Q |
| |
|
|||||||||| || | ||||||||||||||| || |||||||| || || ||| |||||||||||| ||||| ||||||||| |
|
|
| T |
35722388 |
tgtcaggatctccaagatcattgtagacatcataatcatagattctgtctgatttcttacgctctccttctccatttcctcttaa |
35722304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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