View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0647_low_15 (Length: 357)

Name: NF0647_low_15
Description: NF0647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0647_low_15
NF0647_low_15
[»] chr8 (38 HSPs)
chr8 (47-345)||(23879041-23879356)
chr8 (45-353)||(24237119-24237428)
chr8 (69-345)||(23216767-23217054)
chr8 (148-345)||(22319818-22320020)
chr8 (92-353)||(25608038-25608317)
chr8 (29-185)||(17264570-17264731)
chr8 (176-310)||(18120222-18120357)
chr8 (104-345)||(23350306-23350554)
chr8 (148-345)||(11600255-11600453)
chr8 (188-324)||(22311295-22311433)
chr8 (35-185)||(22499244-22499399)
chr8 (21-185)||(33170315-33170484)
chr8 (208-345)||(17264771-17264908)
chr8 (69-182)||(23118783-23118902)
chr8 (69-185)||(24554515-24554636)
chr8 (87-184)||(24906055-24906159)
chr8 (116-345)||(19333800-19334052)
chr8 (190-345)||(25293778-25293932)
chr8 (190-345)||(25755767-25755921)
chr8 (92-345)||(45561465-45561744)
chr8 (117-238)||(17500014-17500143)
chr8 (87-185)||(20707918-20708021)
chr8 (284-336)||(23539254-23539306)
chr8 (149-284)||(18263246-18263380)
chr8 (148-185)||(22311238-22311275)
chr8 (86-182)||(7468428-7468534)
chr8 (150-185)||(21233971-21234006)
chr8 (126-290)||(22883941-22884111)
chr8 (69-146)||(18043137-18043213)
chr8 (283-336)||(24622612-24622665)
chr8 (126-233)||(16000334-16000451)
chr8 (281-328)||(17624919-17624966)
chr8 (282-336)||(24382525-24382579)
chr8 (149-182)||(24266189-24266222)
chr8 (149-182)||(29296070-29296103)
chr8 (197-229)||(17124555-17124587)
chr8 (284-336)||(23638154-23638205)
chr8 (284-336)||(24551809-24551861)
[»] chr2 (23 HSPs)
chr2 (31-334)||(45620227-45620539)
chr2 (126-345)||(18533512-18533737)
chr2 (69-353)||(6092564-6092852)
chr2 (252-345)||(29112074-29112166)
chr2 (255-326)||(23614375-23614446)
chr2 (86-233)||(25132348-25132502)
chr2 (252-345)||(20271213-20271306)
chr2 (190-345)||(43640598-43640754)
chr2 (190-328)||(19435721-19435859)
chr2 (148-291)||(25593354-25593498)
chr2 (254-345)||(23170102-23170193)
chr2 (254-345)||(23581359-23581450)
chr2 (28-79)||(20271005-20271056)
chr2 (252-339)||(24839670-24839756)
chr2 (21-185)||(24272112-24272280)
chr2 (281-328)||(23157369-23157416)
chr2 (281-328)||(23568626-23568673)
chr2 (199-245)||(19110875-19110921)
chr2 (252-322)||(19657771-19657839)
chr2 (199-249)||(23172394-23172444)
chr2 (199-249)||(23583651-23583701)
chr2 (149-182)||(19648276-19648309)
chr2 (254-290)||(24272359-24272395)
[»] chr7 (27 HSPs)
chr7 (92-345)||(4072766-4073032)
chr7 (208-345)||(12245944-12246081)
chr7 (69-328)||(21677305-21677585)
chr7 (189-341)||(28718272-28718424)
chr7 (208-343)||(14278670-14278806)
chr7 (213-342)||(14302632-14302762)
chr7 (86-345)||(4482397-4482670)
chr7 (92-345)||(39293918-39294191)
chr7 (21-149)||(17948008-17948136)
chr7 (255-336)||(19065546-19065627)
chr7 (98-185)||(15980465-15980559)
chr7 (213-345)||(3135414-3135547)
chr7 (197-282)||(15305684-15305768)
chr7 (93-182)||(9323001-9323095)
chr7 (175-291)||(4598370-4598485)
chr7 (208-291)||(13460599-13460677)
chr7 (252-345)||(15980303-15980386)
chr7 (254-290)||(3193868-3193904)
chr7 (175-320)||(19381183-19381327)
chr7 (148-185)||(9641239-9641276)
chr7 (190-336)||(16206276-16206424)
chr7 (150-185)||(28388635-28388670)
chr7 (252-290)||(9322893-9322931)
chr7 (284-338)||(16088735-16088789)
chr7 (149-182)||(9058568-9058601)
chr7 (148-225)||(18081209-18081291)
chr7 (247-291)||(13452491-13452535)
[»] chr3 (39 HSPs)
chr3 (69-345)||(15551669-15551957)
chr3 (87-345)||(25106121-25106383)
chr3 (62-345)||(17760577-17760872)
chr3 (62-345)||(19061897-19062192)
chr3 (69-345)||(6817407-6817694)
chr3 (87-345)||(17391132-17391382)
chr3 (32-345)||(15988603-15988930)
chr3 (252-345)||(14182175-14182268)
chr3 (29-185)||(5230551-5230712)
chr3 (253-324)||(40041369-40041441)
chr3 (202-336)||(20419017-20419149)
chr3 (148-345)||(8602486-8602680)
chr3 (252-342)||(31414422-31414511)
chr3 (252-345)||(37918681-37918775)
chr3 (272-345)||(38378055-38378128)
chr3 (21-185)||(43429478-43429648)
chr3 (255-324)||(5230400-5230469)
chr3 (266-345)||(38813179-38813257)
chr3 (25-185)||(17320518-17320684)
chr3 (210-345)||(12950836-12950971)
chr3 (148-291)||(10902661-10902805)
chr3 (21-287)||(11517291-11517558)
chr3 (69-182)||(31416187-31416305)
chr3 (175-291)||(11822618-11822734)
chr3 (148-290)||(41659810-41659951)
chr3 (281-336)||(3295152-3295207)
chr3 (283-336)||(4655436-4655489)
chr3 (149-185)||(14819788-14819824)
chr3 (201-288)||(14968084-14968167)
chr3 (284-338)||(25487602-25487656)
chr3 (149-182)||(6230604-6230637)
chr3 (190-287)||(12490652-12490749)
chr3 (148-182)||(21168649-21168683)
chr3 (149-182)||(4147638-4147671)
chr3 (149-182)||(33371312-33371345)
chr3 (175-278)||(7254432-7254535)
chr3 (197-245)||(30177591-30177639)
chr3 (148-191)||(38378204-38378248)
chr3 (252-284)||(43429368-43429400)
[»] chr6 (23 HSPs)
chr6 (29-345)||(16131329-16131664)
chr6 (257-345)||(23219619-23219708)
chr6 (208-345)||(31163090-31163227)
chr6 (69-345)||(29162684-29162976)
chr6 (197-346)||(4174485-4174636)
chr6 (198-346)||(4230114-4230264)
chr6 (28-345)||(21929512-21929843)
chr6 (25-185)||(22468047-22468214)
chr6 (84-185)||(22595601-22595707)
chr6 (197-336)||(16374231-16374368)
chr6 (93-238)||(23219113-23219268)
chr6 (69-185)||(34965044-34965165)
chr6 (93-182)||(15006584-15006678)
chr6 (69-127)||(15295494-15295552)
chr6 (284-336)||(6777767-6777819)
chr6 (187-291)||(17858215-17858314)
chr6 (254-288)||(17375555-17375589)
chr6 (284-336)||(12478424-12478476)
chr6 (197-233)||(14487460-14487496)
chr6 (150-182)||(31469485-31469517)
chr6 (151-185)||(19852461-19852495)
chr6 (149-182)||(22846314-22846347)
chr6 (254-290)||(19852574-19852610)
[»] chr5 (20 HSPs)
chr5 (199-353)||(20456331-20456484)
chr5 (29-345)||(11963669-11964005)
chr5 (92-345)||(14345432-14345708)
chr5 (29-238)||(11765596-11765811)
chr5 (87-185)||(23236349-23236452)
chr5 (208-343)||(5453075-5453210)
chr5 (25-185)||(19871981-19872147)
chr5 (190-345)||(24227706-24227864)
chr5 (87-190)||(33628208-33628318)
chr5 (208-332)||(3671690-3671814)
chr5 (152-321)||(16837553-16837722)
chr5 (292-353)||(11765512-11765573)
chr5 (252-291)||(19872225-19872264)
chr5 (148-190)||(3420768-3420810)
chr5 (252-290)||(23412256-23412294)
chr5 (149-182)||(24082309-24082342)
chr5 (148-182)||(5623362-5623396)
chr5 (149-182)||(6454900-6454933)
chr5 (284-336)||(10178956-10179007)
chr5 (252-284)||(23236240-23236272)
[»] scaffold0005 (1 HSPs)
scaffold0005 (29-291)||(247625-247896)
[»] chr4 (24 HSPs)
chr4 (29-291)||(14569480-14569751)
chr4 (199-345)||(5372894-5373040)
chr4 (32-345)||(54365855-54366172)
chr4 (58-345)||(15216014-15216313)
chr4 (29-288)||(24236980-24237233)
chr4 (29-290)||(19623872-19624132)
chr4 (214-342)||(9650114-9650243)
chr4 (69-185)||(41919188-41919310)
chr4 (69-290)||(47470166-47470394)
chr4 (21-183)||(50224098-50224266)
chr4 (256-318)||(12136095-12136157)
chr4 (254-332)||(41919030-41919108)
chr4 (86-185)||(10239381-10239485)
chr4 (87-145)||(17378180-17378238)
chr4 (252-345)||(15116071-15116162)
chr4 (111-185)||(12136240-12136318)
chr4 (148-185)||(13595969-13596006)
chr4 (149-185)||(7187872-7187908)
chr4 (284-324)||(19076201-19076241)
chr4 (284-336)||(19855507-19855559)
chr4 (289-328)||(12452676-12452715)
chr4 (149-182)||(41258294-41258327)
chr4 (254-290)||(41258177-41258213)
chr4 (254-290)||(50223991-50224027)
[»] scaffold0808 (1 HSPs)
scaffold0808 (175-333)||(5564-5722)
[»] scaffold0231 (2 HSPs)
scaffold0231 (175-345)||(15116-15286)
scaffold0231 (197-283)||(15705-15787)
[»] scaffold0009 (2 HSPs)
scaffold0009 (29-345)||(256570-256890)
scaffold0009 (126-191)||(98890-98960)
[»] scaffold0017 (1 HSPs)
scaffold0017 (126-327)||(10438-10650)
[»] scaffold1923 (1 HSPs)
scaffold1923 (204-327)||(642-766)
[»] scaffold0468 (1 HSPs)
scaffold0468 (255-345)||(13161-13251)
[»] scaffold0183 (1 HSPs)
scaffold0183 (175-282)||(8602-8709)
[»] chr1 (19 HSPs)
chr1 (25-180)||(33383989-33384151)
chr1 (252-345)||(33395172-33395265)
chr1 (21-182)||(41213602-41213769)
chr1 (266-345)||(78285-78364)
chr1 (126-345)||(20191904-20192128)
chr1 (69-238)||(5770079-5770257)
chr1 (84-191)||(21041919-21042031)
chr1 (93-185)||(20820561-20820660)
chr1 (21-191)||(40555439-40555614)
chr1 (291-345)||(20820768-20820822)
chr1 (117-185)||(40438230-40438304)
chr1 (283-338)||(15807025-15807080)
chr1 (151-291)||(25093045-25093186)
chr1 (84-143)||(40438319-40438377)
chr1 (149-282)||(46143973-46144101)
chr1 (254-291)||(5472220-5472257)
chr1 (254-291)||(40555676-40555713)
chr1 (149-182)||(52397854-52397887)
chr1 (190-261)||(20252265-20252337)
[»] scaffold0090 (2 HSPs)
scaffold0090 (197-328)||(36981-37106)
scaffold0090 (190-345)||(6906-7064)
[»] scaffold0115 (1 HSPs)
scaffold0115 (258-345)||(19631-19719)
[»] scaffold0174 (2 HSPs)
scaffold0174 (254-345)||(22349-22443)
scaffold0174 (151-182)||(772-803)
[»] scaffold0347 (1 HSPs)
scaffold0347 (198-328)||(3595-3724)
[»] scaffold0032 (2 HSPs)
scaffold0032 (93-345)||(121748-122005)
scaffold0032 (149-182)||(106560-106593)
[»] scaffold0601 (1 HSPs)
scaffold0601 (265-345)||(3224-3304)
[»] scaffold0331 (1 HSPs)
scaffold0331 (266-332)||(11641-11706)
[»] scaffold0216 (2 HSPs)
scaffold0216 (252-345)||(22911-23003)
scaffold0216 (148-189)||(23059-23100)
[»] scaffold0004 (2 HSPs)
scaffold0004 (84-185)||(25680-25786)
scaffold0004 (86-182)||(84553-84650)
[»] scaffold0258 (1 HSPs)
scaffold0258 (89-281)||(8386-8596)
[»] scaffold0442 (1 HSPs)
scaffold0442 (86-238)||(1851-2012)
[»] scaffold0028 (1 HSPs)
scaffold0028 (254-328)||(40299-40374)
[»] scaffold0035 (1 HSPs)
scaffold0035 (197-336)||(64277-64415)
[»] scaffold0112 (1 HSPs)
scaffold0112 (101-284)||(11959-12156)
[»] scaffold0299 (1 HSPs)
scaffold0299 (284-336)||(10370-10422)
[»] scaffold0133 (1 HSPs)
scaffold0133 (116-185)||(3650-3725)
[»] scaffold0387 (1 HSPs)
scaffold0387 (149-238)||(2910-3003)
[»] scaffold0148 (1 HSPs)
scaffold0148 (150-185)||(36093-36128)
[»] scaffold0327 (1 HSPs)
scaffold0327 (149-182)||(6835-6868)
[»] scaffold0219 (1 HSPs)
scaffold0219 (149-182)||(25914-25947)
[»] scaffold0282 (1 HSPs)
scaffold0282 (284-336)||(21098-21150)
[»] scaffold0088 (1 HSPs)
scaffold0088 (256-288)||(45432-45464)
[»] scaffold0073 (1 HSPs)
scaffold0073 (254-290)||(55745-55781)
[»] scaffold0205 (2 HSPs)
scaffold0205 (252-291)||(4764-4803)
scaffold0205 (117-176)||(4619-4681)
[»] scaffold0013 (1 HSPs)
scaffold0013 (69-124)||(16689-16744)
[»] scaffold0001 (1 HSPs)
scaffold0001 (150-185)||(141221-141256)
[»] scaffold0613 (1 HSPs)
scaffold0613 (197-243)||(2958-3004)
[»] scaffold0357 (1 HSPs)
scaffold0357 (149-179)||(5923-5953)
[»] scaffold0725 (1 HSPs)
scaffold0725 (148-185)||(7268-7305)
[»] scaffold0335 (1 HSPs)
scaffold0335 (190-247)||(10142-10199)
[»] scaffold0138 (1 HSPs)
scaffold0138 (149-182)||(18824-18857)
[»] scaffold0333 (1 HSPs)
scaffold0333 (284-336)||(4295-4346)


Alignment Details
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 47 - 345
Target Start/End: Original strand, 23879041 - 23879356
Alignment:
Q  47 gacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagact 146  Q
    ||||||||| |||| |||||||||||||| ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  23879041 gacatatgggcaaaatctcaataacataagcaagtccagaataatcaatctagaataatcatacagacagacatcctagatcagagcctactctaagacc 23879140  T
Q  147 caa-------cgataacggagatagctcccgctatccaagcaatcaacaa----------aactaaacctgcacgccatctacccattcatacaaatagg 229  Q
    |||       |||||||| ||||||||||| ||||||||||| ||| |||          |||||| | ||||| || ||||||||||||||||||||||    
T  23879141 caaaagaaaacgataacgtagatagctcccactatccaagcactcaccaagcaagcaacaaactaatcttgcacaccgtctacccattcatacaaatagg 23879240  T
Q  230 taggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatat 329  Q
    |||| ||||||||||| || | | ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||     
T  23879241 taggcggtccaccacaaaccactaggggttagcttcacatcaatcataatcaacataaacaaacataagcattcaaggctttcatacataacacatatac 23879340  T
Q  330 atactcatccctccta 345  Q
    |||  |||||||||||    
T  23879341 ataaccatccctccta 23879356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 45 - 353
Target Start/End: Original strand, 24237119 - 24237428
Alignment:
Q  45 ccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaaga 144  Q
    |||||| |||| |||| |||||| ||||||||    || || ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  24237119 ccgacacatgggcaaaatctcaacaacataaa----tccagcataatcaatctagaatagtcataaagacagacatcctagatcagagcctactctaaga 24237214  T
Q  145 ctcaa-------cgataacggagatagctcccgctatccaagcaatcaacaa---aactaaacctgcacgccatctacccattcatacaaataggtaggt 234  Q
    | |||       |||||||||||||||||| ||||||||| ||| ||| |||   |||||  ||||||| || |||||||||||||||||| ||||||||    
T  24237215 cccaaaagaaaacgataacggagatagctcacgctatccaggcactcaccaagcaaactactcctgcactccgtctacccattcatacaaacaggtaggt 24237314  T
Q  235 ggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatact 334  Q
    |||| |      || | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||     
T  24237315 ggtcaaa-----accattgggggtaagattcacatcaatcataatcaacataaacaaacataaacattcaaagatttcatgcataacacatatacatacc 24237409  T
Q  335 catccctcctatgatacta 353  Q
    |||||||||||| ||||||    
T  24237410 catccctcctataatacta 24237428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 69 - 345
Target Start/End: Original strand, 23216767 - 23217054
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagat 162  Q
    |||||||| || || ||||||| |||||||||||||||||| ||||| |||| |||||||| ||||||| |||||||||      ||||||||| |||||    
T  23216767 aacataaataaatccagaataaacaatctagaataatcataaagacagacatactagatcaaagcctaccctaagactctaaggaaacgataacagagat 23216866  T
Q  163 agctcccgctatccaagcaa-tcaacaaaa-----ctaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtggg 255  Q
    |||||||||||||||||||  ||| | |||     |||| |||||||||| |||||||||||| ||||| ||||||| |||||| |||||| | | ||||    
T  23216867 agctcccgctatccaagcagctcaccgaaagcaaactaatcctgcacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactggg 23216965  T
Q  256 ggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  23216966 ggtaagcttcacatcaatcataatcaacataaacaaacataggcattcaagga-ttcatgcataacacatatacataatcatccctccta 23217054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 148 - 345
Target Start/End: Original strand, 22319818 - 22320020
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaatcaacaaaa-----ctaaacctgcacgccatctacccattcatacaaataggtaggtggtccacc 242  Q
    |||||||||||||||||||||||||||||||||||||| | |||     |||| |||||||||| |||||||||||||| ||| ||||||| || ||| |    
T  22319818 aacgataacggagatagctcccgctatccaagcaatcagcgaaagcaaactaatcctgcacgccgtctacccattcatataaacaggtaggcgg-ccatc 22319916  T
Q  243 acaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccct 341  Q
    | ||| | | |||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  22319917 atagatccactgggggtaagttttacatcaatcataatcaacataaacaaacataagcattcaaggatttcatgcataacacatatatataaccatccct 22320016  T
Q  342 ccta 345  Q
    ||||    
T  22320017 ccta 22320020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 92 - 353
Target Start/End: Original strand, 25608038 - 25608317
Alignment:
Q  92 caatctagaataatcatacagacaaacatcctagatcagagcctac-tctaagactc-----aacgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||||||   ||| ||||||||||||| ||||||| | ||||||||     ||||||||||||||||||||||||||||||||||||||    
T  25608038 caatctagaataatcataagtacatacatcctagatcatagcctacatttaagactccaaaaaacgataacggagatagctcccgctatccaagcaatca 25608137  T
Q  186 acaa--------------aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatc 270  Q
     |||              |||||| | |||||||| |||||||||||||||||| ||||||| ||||||  ||||| | | ||||  |||||||||||||    
T  25608138 ccaagcacaccaaaagcaaactaatcttgcacgccgtctacccattcatacaaacaggtaggcggtccatgacagatccactggg--taagcttcacatc 25608235  T
Q  271 aatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctcctatgatacta 353  Q
    ||||||||||||||||||||||||||| |||| || || |||||||||| |||||||| |||  |||||||||||| ||||||    
T  25608236 aatcataatcaacataaacaaacataagcatttaa-gaattcatgcatagcacatatacataaacatccctcctataatacta 25608317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 17264570 - 17264731
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    ||||| ||||||||  |||||| |||| |||| |||| | |||||||| || || |||||||||||||||||||||||||| ||||| ||||||||||||    
T  17264570 ataaattctccaaatcccgacaaatgggcaaa-tctccacaacataaataaatccagaataatcaatctagaataatcataaagacagacatcctagatc 17264668  T
Q  129 agagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||| |||||||||      ||||||||||||||||||||||||||||||||||||||    
T  17264669 agagcctaccctaagactcaaaggaaacgataacggagatagctcccgctatccaagcaatca 17264731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 310
Target Start/End: Complemental strand, 18120357 - 18120222
Alignment:
Q  176 caagcaatcaacaaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatca 275  Q
    ||||||| ||||||||||||||||||| | | |||| ||||||||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  18120357 caagcaagcaacaaaactaaacctgcatgtcgtctaaccattcatacaaataggtaggcggtccaccacagaccactgggggttagcttcacatcaatca 18120258  T
Q  276 taatcaa-cataaacaaacataaacattcaaggatt 310  Q
    |||||||  |||| ||||||||| ||||||||||||    
T  18120257 taatcaagaataagcaaacataagcattcaaggatt 18120222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 345
Target Start/End: Original strand, 23350306 - 23350554
Alignment:
Q  104 atcatacagacaaacatcctagatcagagcctactctaagactcaac------gataacggagatagctcccgctatccaagcaatcaacaa---aacta 194  Q
    ||||||| || | |||||||| |||||||||||||||||||||||||      |||||||||||||||| ||| |||||||||| ||| |||   |||||    
T  23350306 atcatacggatagacatcctaaatcagagcctactctaagactcaacagaaacgataacggagatagcttccgttatccaagcactcaccaagcaaacta 23350405  T
Q  195 aacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacata----aaca 290  Q
      ||||||| || |||||||||||||| ||| ||||||| | || |   ||      |||||||||||||||||||||||||||||||||||    ||||    
T  23350406 ctcctgcacaccgtctacccattcataaaaa-aggtaggcgctcaaaagcat-----tgggggtaagcttcacatcaatcataatcaacatatgaaaaca 23350499  T
Q  291 aacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||| |||||||||| |||||| |||||||||||| |||| |||||||||||    
T  23350500 aacataagcattcaaggacttcatggataacacatatacatacacatccctccta 23350554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 148 - 345
Target Start/End: Original strand, 11600255 - 11600453
Alignment:
Q  148 aacgataacggagat-agctcccgctatccaagcaatcaacaaaactaaacc-----tgcacgccatctacccattcatacaaataggtaggtggtccac 241  Q
    |||||||||| |||| ||||| ||||||||||||| ||| |||||  ||||      ||||| || |||||||||||||||||| ||||||| |||| |     
T  11600255 aacgataacgaagattagctctcgctatccaagcactcaccaaaagcaaactactcatgcactccgtctacccattcatacaaacaggtaggcggtcaaa 11600354  T
Q  242 cacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccct 341  Q
         || | |||| ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  11600355 -----accactgggagtaagcttcacatcaatcacaatccacataaacaaacataagcattcaaggatttcatgcataacacatatatataaccatccct 11600449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 324
Target Start/End: Original strand, 22311295 - 22311433
Alignment:
Q  188 aaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagt-gggggtaagcttcacatcaatcataatcaacat 285  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||  ||| || |||||| | | | |||||||||||| |||| |||||||||||||||    
T  22311295 aaaactaatcatgcacgccgtctacccattcatacaaacaggtagccggttcatcacagatccactcgggggtaagctttacattaatcataatcaacat 22311394  T
Q  286 aaacaaacataaacattcaaggatttcatgcataacaca 324  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  22311395 aaacaaacataagcattcaaggatttcatgcataacaca 22311433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 22499399 - 22499244
Alignment:
Q  35 tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcc 134  Q
    ||||||||  |||||| |||| |||| |||| | |||||||| || || ||||||| |||||||||||||||||| ||||| |||||||||||||||| |    
T  22499399 tctccaaatcccgacaaatgggcaaa-tctccacaacataaataaatccagaataaacaatctagaataatcataaagacagacatcctagatcagagtc 22499301  T
Q  135 tactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    ||| |||||||||      |||||||||||||||||||||| |||||||||||||||    
T  22499300 taccctaagactcaaaggaaacgataacggagatagctccctctatccaagcaatca 22499244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 185
Target Start/End: Original strand, 33170315 - 33170484
Alignment:
Q  21 acatcatcataaaat-ctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaaca 119  Q
    ||||||||||||||| |||||||  |||||| ||||||||| |||| | |||||||| || || ||||||| |||||||||||||||||| | |||||||    
T  33170315 acatcatcataaaattctccaaatcccgacaaatggacaaa-tctccacaacataaataaatccagaataaacaatctagaataatcataaa-acaaaca 33170412  T
Q  120 tcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||| |||| |||||||||      ||| |||| |||||||||||||| ||||||||||||||    
T  33170413 tcctagatcagagtctaccctaagactctaaggaaacaataatggagatagctcccgatatccaagcaatca 33170484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 17264771 - 17264908
Alignment:
Q  208 tctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaag 306  Q
    ||||| ||| |||||| | ||||||| |||||| |||||| | | ||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  17264771 tctactcatccatacagacaggtaggcggtccatcacagatccactggaggtaagcttcacatcaatcataatcaacataaataaacataggcattcaag 17264870  T
Q  307 gatttcatgcataacacatatatatactcatccctccta 345  Q
    || ||||||||||||||||||| ||| ||| ||||||||    
T  17264871 ga-ttcatgcataacacatatacataatcacccctccta 17264908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 23118902 - 23118783
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagat 162  Q
    |||||||| || || ||||||| |||||||||||||||||| ||| | ||||||||||||||||| ||| |||||||||      |||||||||||||||    
T  23118902 aacataaataaatccagaataaacaatctagaataatcataaagaaagacatcctagatcagagcttaccctaagactctaagtaaacgataacggagat 23118803  T
Q  163 agctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||    
T  23118802 agctcccgctatccaagcaa 23118783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 24554636 - 24554515
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagat 162  Q
    |||||||| || |||| ||| | |||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||      |||||||||||||||    
T  24554636 aacataaataaatctataattaacaatctagaataatcata-agacagacatcctagatcagagcctatcctaagactctaaggaaacgataacggagat 24554538  T
Q  163 agctcccgctatccaagcaatca 185  Q
    |||||||||||||||||||||||    
T  24554537 agctcccgctatccaagcaatca 24554515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 24906055 - 24906159
Alignment:
Q  87 ataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc-------aacgataacggagatagctcccgctatccaag 179  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||||| | |||||||       ||||||||||||||||||||||||||||||||    
T  24906055 ataaacaatctagaataatcataaagacaaatatcctagatcagagcctaccccaagactcaagaggaaacgataacggagatagctcccgctatccaag 24906154  T
Q  180 caatc 184  Q
    |||||    
T  24906155 caatc 24906159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 345
Target Start/End: Complemental strand, 19334052 - 19333800
Alignment:
Q  116 aacatcctagatcagagcctac-tctaagactc-----aacgataacggagatagctcccgctatccaagcaatcaaca-----------------aaac 192  Q
    |||||||||||||||||||||  ||||||||||     |||||||| ||||||||||||||||||||||||||||| ||                 ||||    
T  19334052 aacatcctagatcagagcctaaatctaagactccaagaaacgataatggagatagctcccgctatccaagcaatcaccaagcaactcaccgaaagcaaac 19333953  T
Q  193 taaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
    ||| |||||||  | ||||||||| |||||| | ||||||| | |||| |||||| | | | ||||||| ||||| ||||||||||||||||||||||||    
T  19333952 taatcctgcacttcgtctacccatccatacagacaggtaggcgatccatcacagatccactaggggtaaacttcatatcaatcataatcaacataaacaa 19333853  T
Q  292 acataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
     ||||  |||||||||| ||||||||||||||||||| |||  |||||||||||    
T  19333852 gcataggcattcaagga-ttcatgcataacacatatacataaccatccctccta 19333800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 345
Target Start/End: Original strand, 25293778 - 25293932
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaa 288  Q
    |||||| |||||||  | ||||||||| |||||| | ||||||| |||||| |||||| | | ||||||||||  | |||||||||||||||||||||||    
T  25293778 aactaatcctgcacaacgtctacccat-catacagacaggtaggcggtccatcacagatccactgggggtaagtattacatcaatcataatcaacataaa 25293876  T
Q  289 caaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||| ||||  ||||||||| ||||||||||||||||||| |||  |||||||||||    
T  25293877 caaatataagtattcaagga-ttcatgcataacacatatacataaccatccctccta 25293932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 345
Target Start/End: Original strand, 25755767 - 25755921
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaa 288  Q
    |||||| |||||||  | ||||||||| |||||| | ||||||| |||||| |||||| | | ||||||||||  | |||||||||||||||||||||||    
T  25755767 aactaatcctgcacaacgtctacccat-catacagacaggtaggcggtccatcacagatccactgggggtaagtattacatcaatcataatcaacataaa 25755865  T
Q  289 caaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||| ||||  ||||||||| ||||||||||||||||||| |||  |||||||||||    
T  25755866 caaatataagtattcaagga-ttcatgcataacacatatacataaccatccctccta 25755921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 345
Target Start/End: Complemental strand, 45561744 - 45561465
Alignment:
Q  92 caatctagaataatcatacagacaaacatcctagatcagagcctac-tctaagactc-----aacgataacggagatagctcccgctatccaagcaatca 185  Q
    |||| ||||||||||||| | ||| ||||||||||||||||||||  ||||||||||     ||||||||| ||||||||||||||||||||||| ||||    
T  45561744 caatttagaataatcataaacacagacatcctagatcagagcctaaatctaagactccaagaaacgataacagagatagctcccgctatccaagcgatca 45561645  T
Q  186 acaa-----------------aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcac 267  Q
     |||                 || ||| |||||||  | ||||||||| |||||| | ||||||| |||||| |||||| | | |||||||||||||| |    
T  45561644 ccaagcaactcaccaaaagcaaattaatcctgcacttcgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaagcttcgc 45561545  T
Q  268 atcaatcataatcaaca---taaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    || |||||||||||| |   ||||||||||||| |||||||||| |||||||||| |||||||| |||  |||||||||||    
T  45561544 attaatcataatcaataaaataaacaaacataagcattcaagga-ttcatgcatagcacatatacataaccatccctccta 45561465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 17500014 - 17500143
Alignment:
Q  117 acatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatcaacaa--aactaaacctgcacgccat 208  Q
    ||||||||||||||||||||  |||||| ||      ||||||||||||||||||||||||||||||||||| || |||  |||||| |||||||  | |    
T  17500014 acatcctagatcagagcctatcctaagattctaaggaaacgataacggagatagctcccgctatccaagcaaccaccaagcaactaatcctgcacttcgt 17500113  T
Q  209 ctacccattcatacaaataggtaggtggtc 238  Q
    |||||||| |||||| ||||||||| ||||    
T  17500114 ctacccatccatacagataggtaggcggtc 17500143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 20707918 - 20708021
Alignment:
Q  87 ataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagc 180  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||  ||||||| |      |||||||||||||| |||||||||||||||| |    
T  20707918 ataaacaatctagaataatcata-agacagacatcctagatcagagcctatcctaagacactaaggaaacgataacggagagagctcccgctatccaaac 20708016  T
Q  181 aatca 185  Q
    |||||    
T  20708017 aatca 20708021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 23539254 - 23539306
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  23539254 ataatcaaacataaacattcaaggattacatgcataacacatatacatactca 23539306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 284
Target Start/End: Complemental strand, 18263380 - 18263246
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa-tcaacaa---aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccac 244  Q
    |||||||||||||||||||||||||||||||||| ||| |||   |||||| |||||||  | ||||||||| |||||| | ||||||| ||||          
T  18263380 acgataacggagatagctcccgctatccaagcaactcaccaaagcaactaaccctgcacttcgtctacccatccatacagacaggtaggcggtc-----a 18263286  T
Q  245 agactagtgggggtaagcttcacatcaatcataatcaaca 284  Q
    | || | ||||||||||||  |||||||||||||||||||    
T  18263285 aaaccactgggggtaagctatacatcaatcataatcaaca 18263246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 22311238 - 22311275
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22311238 aacgataacggagatagctcccgctatccaagcaatca 22311275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 7468428 - 7468534
Alignment:
Q  86 aataatcaatctagaataatcatacagacaaacatcctagatca-----gagcctactctaagactc------aacgataacggagatagctcccgctat 174  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||     |||||||  |||||||||      |||||||||||||||||||||| ||||    
T  7468428 aataaacaatctagaataatcata-agacagacatcctagatcaaagccgagcctatcctaagactctaaagaaacgataacggagatagctcccactat 7468526  T
Q  175 ccaagcaa 182  Q
    ||||||||    
T  7468527 ccaagcaa 7468534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 21234006 - 21233971
Alignment:
Q  150 cgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||||||||||||||||||||||||    
T  21234006 cgataacggagatagctcccgctatccaagcaatca 21233971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 290
Target Start/End: Original strand, 22883941 - 22884111
Alignment:
Q  126 atcagagcctactctaagactc-----aacgataacggagat-agctcccgctatccaagcaatcaacaaaactaaac-----ctgcacgccatctaccc 214  Q
    ||||||||||| ||||||||||     ||||||||| ||||| ||||||| ||||||||||| ||| ||||| |||||     |||||| |  |||||||    
T  22883941 atcagagcctaatctaagactctaagaaacgataacagagattagctcccactatccaagcactcaccaaaagtaaactactcctgcactctgtctaccc 22884040  T
Q  215 attcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    ||||||||||| |||||||  ||| |      || | | ||||| |||||||||||||||||||||||||||||||    
T  22884041 attcatacaaacaggtaggcagtcaaa-----accactaggggttagcttcacatcaatcataatcaacataaaca 22884111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 18043213 - 18043137
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagact 146  Q
    |||||||| || || |||| || |||||||||||||||||| ||||| |||||||||||||||| |||| || |||||    
T  18043213 aacataaataaatccagaacaaacaatctagaataatcata-agacagacatcctagatcagagtctaccctgagact 18043137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 24622612 - 24622665
Alignment:
Q  283 cataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    ||||| |||||||||||||||||||||| ||||||||  ||||||| |||||||    
T  24622612 cataatcaaacataaacattcaaggattgcatgcatagtacatatacatactca 24622665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 16000334 - 16000451
Alignment:
Q  126 atcagagcctactctaagactc----aacgataacggaga-tagctcccgctatccaagcaatcaaca-----aaactaaacctgcacgccatctaccca 215  Q
    ||||||||||| ||||||||||    |||||||||||||| ||||| |||||||||||||| ||| ||     ||||||  ||||||| || ||||| ||    
T  16000334 atcagagcctaatctaagactccaagaacgataacggagattagcttccgctatccaagcactcatcaaaaacaaactactcctgcactccgtctacaca 16000433  T
Q  216 ttcatacaaataggtagg 233  Q
    |||||||||| |||||||    
T  16000434 ttcatacaaacaggtagg 16000451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 17624966 - 17624919
Alignment:
Q  281 aacataaacaaacataaacattcaaggatttcatgcataacacatata 328  Q
    ||||||| |||||||||| ||||||| |||||||||||| ||||||||    
T  17624966 aacataatcaaacataaaaattcaagaatttcatgcatagcacatata 17624919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 24382525 - 24382579
Alignment:
Q  282 acataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||||| ||||||||| |||||||| |||||||||||| || ||||| |||||||    
T  24382525 acataatcaaacataagcattcaagtatttcatgcatatcatatatacatactca 24382579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 24266189 - 24266222
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||||||||| ||||||    
T  24266189 acgataacggagatagctcccgctatcaaagcaa 24266222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 29296070 - 29296103
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    |||||| |||||||||||||||||||||||||||    
T  29296070 acgatagcggagatagctcccgctatccaagcaa 29296103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 17124555 - 17124587
Alignment:
Q  197 cctgcacgccatctacccattcatacaaatagg 229  Q
    |||||||||| ||||||||||||||||||||||    
T  17124555 cctgcacgccgtctacccattcatacaaatagg 17124587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 23638154 - 23638205
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| ||||||||| |||||||||| |||||||||| |||||||| |||||||    
T  23638154 ataatcaaacataagcattcaagga-ttcatgcatatcacatatacatactca 23638205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 24551861 - 24551809
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| ||||||||| ||||||||||||||| ||||| ||| |||| |||||||    
T  24551861 ataatcaaacataagcattcaaggatttcaagcatagcacctatacatactca 24551809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 31 - 334
Target Start/End: Complemental strand, 45620539 - 45620227
Alignment:
Q  31 aaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcag 130  Q
    ||||||||||||  ||||||||| | |||| |||| ||||||||||    || || ||||||||||||||||||||||| ||||| ||||||||||||||    
T  45620539 aaaatctccaaatcccgacatatcggcaaaatctctataacataaa----tccagcataatcaatctagaataatcataaagacagacatcctagatcag 45620444  T
Q  131 agcctactctaagactcaa-----cgataacggagatagctcccgctatc-----------caagcaatcaacaaaactaaacctgcacgccatctaccc 214  Q
    |||||||| ||||||||||     ||||||||||||||||||||||||||           ||||||||||||||  |||  ||||||| || |||||||    
T  45620443 agcctactttaagactcaaaagatcgataacggagatagctcccgctatctgagcactccccaagcaatcaacaa--ctactcctgcacaccgtctaccc 45620346  T
Q  215 attcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcat 314  Q
    ||||||||||||||||||| |||||||||||||| | || |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  45620345 attcatacaaataggtaggcggtccaccacagaccactgagggttagcttcacatcaatcataatcaa-ataaacaaacataagcattcaaggatttcat 45620247  T
Q  315 gcataacacatatatatact 334  Q
    |||||||||||||| |||||    
T  45620246 gcataacacatatacatact 45620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 126 - 345
Target Start/End: Original strand, 18533512 - 18533737
Alignment:
Q  126 atcagagcctactctaagactcaa-----cgataacggagat-agctcccgctatccaagcaatcaacaaaactaaa-----cctgcacgccatctaccc 214  Q
    ||||||||||| |||||||||| |     ||||||||||||| | ||||||||||||||||||||| |||||  |||     ||||||| |  |||||||    
T  18533512 atcagagcctaatctaagactccaagaaccgataacggagattaactcccgctatccaagcaatcaccaaaagcaaaatactcctgcactctgtctaccc 18533611  T
Q  215 attcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcat 314  Q
    ||||||||||| ||||||| |||  |      || | |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  18533612 attcatacaaacaggtaggcggttaaa-----accactgggggtaagcttcacatcaatcataatcaacataatcaaacataagcattcaaggatttcat 18533706  T
Q  315 gcataacacatatatatactcatccctccta 345  Q
    |||||||||||||| |||| |||||||||||    
T  18533707 gcataacacatatacatacccatccctccta 18533737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 353
Target Start/End: Original strand, 6092564 - 6092852
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagat 162  Q
    |||||||| || || ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||      |||||||||||||||    
T  6092564 aacataaataaatccagaataaacaatctagaataatcataaagacagacatcctagatcagagcctacccta-gactctaaggaaacgataacggagat 6092662  T
Q  163 agctcccgctatccaagcaa-tcaacaaaa-----ctaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggg 256  Q
    |||||||||||||||||||| ||| |||||     |||| | |||||  | ||||||||| |||| | | || |||| |||| |      || | |||||    
T  6092663 agctcccgctatccaagcaactcaccaaaagcaaactaatcatgcacttcgtctacccatccatatagacagataggcggtcaaa-----accaatgggg 6092757  T
Q  257 gtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctcctatgatacta 353  Q
     ||||||| ||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||||| |||  |||||||||||| ||||||    
T  6092758 -taagctttacatcaatcataatcaacataaacaaacacaggcattcaagga-ttcatgcataacacatatacataaccatccctcctataatacta 6092852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 29112074 - 29112166
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||||||| |||  |||||||||||    
T  29112074 tgggggtaagcttcacatcaatcacaatcaacataaacaaacatagacattcaacga-ttcatgcataacacatatacataaccatccctccta 29112166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 23614446 - 23614375
Alignment:
Q  255 gggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacata 326  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  23614446 gggtaagattcacgtcaatcataatcaacataaacaaatataagcattcaaggatttcatgcataacacata 23614375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 25132348 - 25132502
Alignment:
Q  86 aataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaag 179  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| |||||||  ||||||||       ||||||||||||||||||||||||||||||||    
T  25132348 aataaacaatctagaataatcata-agacagacatcctagatcggagcctatcctaagactgtaaggaaacgataacggagatagctcccgctatccaag 25132446  T
Q  180 caatcaacaa--aactaaacctgcacgccatctacccattcatacaaataggtagg 233  Q
    |||||| |||  |||||| |||||||  | ||||||| | |||||| | |||||||    
T  25132447 caatcaccaagtaactaatcctgcacttcgtctacccttccatacagacaggtagg 25132502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 20271213 - 20271306
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||||||||||||||||||||| ||||| ||  ||||| |||||||||||||||||||| | ||||||| |||| |||||||||||    
T  20271213 tgggggtaagcttcacatcaatcataatcaaacataa-caggcataagcattcaaggatttcatgcatgatacatatacatacccatccctccta 20271306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 345
Target Start/End: Original strand, 43640598 - 43640754
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatc---aacat 285  Q
    |||||| |||||||  | ||||||||| |||||| ||||||||| |||||| |||||| | | ||||  |||||||||||||||||||||||   || ||    
T  43640598 aactaatcctgcacaacgtctacccatccatacagataggtaggcggtccatcacagatccactggg--taagcttcacatcaatcataatcaataaaat 43640695  T
Q  286 aaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||  |||||||||| |||||||||| |||||||| |||  |||||||||||    
T  43640696 aaacaaacataggcattcaagga-ttcatgcatagcacatatacataaccatccctccta 43640754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 19435859 - 19435721
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaa 288  Q
    |||||| |||||||  | ||||||||| |||| | | ||||||| |||||| || ||| | | ||||||||||  | |||| |||||||||||||| |||    
T  19435859 aactaatcctgcacaacgtctacccatccatatagacaggtaggcggtccatcatagatccattgggggtaagtattacataaatcataatcaacaaaaa 19435760  T
Q  289 caaacataaacattcaaggatttcatgcataacacatata 328  Q
    |||| |||| |||||||||| |||||||||||||||||||    
T  19435759 caaatataagcattcaagga-ttcatgcataacacatata 19435721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 291
Target Start/End: Original strand, 25593354 - 25593498
Alignment:
Q  148 aacgataacggagat-agctcccgctatccaagcaatcaacaaaactaaac-----ctgcacgccatctacccattcatacaaataggtaggtggtccac 241  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||  ||||     || ||| || |||||||||||||||||| ||||||| |||| |     
T  25593354 aacgataacagagattagctcctgctatccaagcactcaccaaaagcaaactactcctacactccgtctacccattcatacaaacaggtaggcggtcaaa 25593453  T
Q  242 cacagactagtgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
         || | ||||||||||||||||||||||||||||||||||||||||    
T  25593454 -----accactgggggtaagcttcacatcaatcataatcaacataaacaa 25593498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 23170193 - 23170102
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||| ||||||||||| |||||| | || |||||  |||||||||| |||||||||||||||||| |||||||||||||  |||||||||||    
T  23170193 ggggttagcttcacatcgatcatacttaatcataagtaaacataaac-ttcaaggatttcatgcatgacacatatatataaccatccctccta 23170102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 23581450 - 23581359
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||| ||||||||||| |||||| | || |||||  |||||||||| |||||||||||||||||| |||||||||||||  |||||||||||    
T  23581450 ggggttagcttcacatcgatcatacttaatcataagtaaacataaac-ttcaaggatttcatgcatgacacatatatataaccatccctccta 23581359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 20271005 - 20271056
Alignment:
Q  28 cataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaa 79  Q
    |||||||||||||||| ||||||||||| |||| |||| |||||||||||||    
T  20271005 cataaaatctccaaaacccgacatatgggcaaaatctccataacataaacaa 20271056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 339
Target Start/End: Original strand, 24839670 - 24839756
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatcc 339  Q
    ||||||||||||| |||||||||||||||||||||   ||||| || |||||||||| ||||| ||||  ||||||| |||| |||||    
T  24839670 tgggggtaagctttacatcaatcataatcaacatatgaaaacacaagcattcaagga-ttcatacatattacatataaatacccatcc 24839756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 185
Target Start/End: Original strand, 24272112 - 24272280
Alignment:
Q  21 acatcatcataaaa--tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaac 118  Q
    ||||||||||||||  ||||||||  |||||| ||||  ||| |||| | |||||||| || || | ||||| | ||||||| |||||||| ||||||||    
T  24272112 acatcatcataaaaattctccaaatcccgacaaatgggtaaa-tctctaaaacataaataaatccaaaataaacgatctagagtaatcata-agacaaac 24272209  T
Q  119 atcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    | |||||||||||| |||  ||| |||||      |||||||||||||||||| |||||||||||||||||||    
T  24272210 a-cctagatcagagtctatccta-gactctaaggaaacgataacggagatagcacccgctatccaagcaatca 24272280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 23157369 - 23157416
Alignment:
Q  281 aacataaacaaacataaacattcaaggatttcatgcataacacatata 328  Q
    ||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  23157369 aacataatcaaacataagcattcaaggatttcttgcataacacctata 23157416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 23568626 - 23568673
Alignment:
Q  281 aacataaacaaacataaacattcaaggatttcatgcataacacatata 328  Q
    ||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  23568626 aacataatcaaacataagcattcaaggatttcttgcataacacctata 23568673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 19110875 - 19110921
Alignment:
Q  199 tgcacgccatctacccattcatacaaataggtaggtggtccaccaca 245  Q
    |||||||| ||| ||||||||||||||||||||||  ||||||||||    
T  19110875 tgcacgccgtctgcccattcatacaaataggtaggcagtccaccaca 19110921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 19657771 - 19657839
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataaca 322  Q
    ||||||||||| | |||||| |||||||| ||||||||| |||||  |||||||||| |||||||||||||    
T  19657771 tgggggtaagcattacatca-tcataatccacataaacagacataggcattcaagga-ttcatgcataaca 19657839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 23172444 - 23172394
Alignment:
Q  199 tgcacgccatctacccattcatacaaataggtaggtggtccaccacagact 249  Q
    ||||| || |||||||||||||||||||| ||||| |||| ||||||||||    
T  23172444 tgcacaccgtctacccattcatacaaataagtaggcggtcaaccacagact 23172394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 23583701 - 23583651
Alignment:
Q  199 tgcacgccatctacccattcatacaaataggtaggtggtccaccacagact 249  Q
    ||||| || |||||||||||||||||||| ||||| |||| ||||||||||    
T  23583701 tgcacaccgtctacccattcatacaaataagtaggcggtcaaccacagact 23583651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 19648276 - 19648309
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    |||||| |||||||||||||||||||||||||||    
T  19648276 acgatagcggagatagctcccgctatccaagcaa 19648309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 24272359 - 24272395
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  24272359 ggggtaagctttacatcaatcataatccacataaaca 24272395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 92 - 345
Target Start/End: Complemental strand, 4073032 - 4072766
Alignment:
Q  92 caatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa-----cgataacggagatagctcccgctatccaagcaatcaa 186  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |     |||||||||||| ||||||| ||||||||||| |||     
T  4073032 caatctaaaataatcataaagacatacatcctagatcagagcctactctaagactccaaagaccgataacggagaaagctcccactatccaagcactcac 4072933  T
Q  187 caa---------aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcata 277  Q
    |||         |||||  |||||||||| |||||||||||||||||| ||||||| |||||||||||||| | | ||||| ||||||||||||||||||    
T  4072932 caagaaatcaacaactactcctgcacgccgtctacccattcatacaaacaggtaggcggtccaccacagaccactaggggttagcttcacatcaatcata 4072833  T
Q  278 atcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||    
T  4072832 atcaacataaac-aacataagcattcaagggtttcatgcataacacatatacatacccatccctccta 4072766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 12245944 - 12246081
Alignment:
Q  208 tctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacattcaag 306  Q
    |||||||||||||||||||||||||| ||| |||||||||| | ||||| || |||| ||||||||||||||||| |||||| || ||||||||||||||    
T  12245944 tctacccattcatacaaataggtaggcggtacaccacagaccactggggtta-gcttgacatcaatcataatcaaacataaataatcataaacattcaag 12246042  T
Q  307 gatttcatgcataacacatatatatactcatccctccta 345  Q
    ||| |||||||||||||||||| |||| |||||||||||    
T  12246043 gatctcatgcataacacatatacatacacatccctccta 12246081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 69 - 328
Target Start/End: Complemental strand, 21677585 - 21677305
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaacg------ataacggagat 162  Q
    |||||||| || || ||||||| |||| |||||||||||| ||||||  ||||||||||||||| |||  ||||||||| |||      |||||||||||    
T  21677585 aacataaataaatccagaataaacaatatagaataatcat-cagacaggcatcctagatcagagtctatcctaagactctacggagacgataacggagat 21677487  T
Q  163 agctcccgctatccaagcaatcaacaa----------------aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacag 246  Q
    ||||||||||||||||||||||| |||                |||||| | |||||||  |||||||||||||||||| ||||||| ||||||  ||||    
T  21677486 agctcccgctatccaagcaatcaccaagcaactcaccaaaagcaactaatcatgcacgcagtctacccattcatacaaacaggtaggcggtccattacag 21677387  T
Q  247 a-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatata 328  Q
    | | | ||||||||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||| ||||||||    
T  21677386 atccaatgggggtaagcttcacatcaatcataatcaacataaataaacataggcattcaagga-ttcatgcatagcacatata 21677305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 189 - 341
Target Start/End: Original strand, 28718272 - 28718424
Alignment:
Q  189 aaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataa 287  Q
    ||||||| | |||||||| |||||||||||||||||||||||||| |||||| || ||| | | |||||||||||||||||| |||||||||||||||||    
T  28718272 aaactaatcatgcacgccgtctacccattcatacaaataggtaggcggtccatcatagatccactgggggtaagcttcacattaatcataatcaacataa 28718371  T
Q  288 acaaacataaacattcaaggatttcatgcataacacatatatatactcatccct 341  Q
    |||||||||  |||||||||| |||||||||| |||||||| |||  |||||||    
T  28718372 acaaacataggcattcaagga-ttcatgcatagcacatatacataaccatccct 28718424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 208 - 343
Target Start/End: Complemental strand, 14278806 - 14278670
Alignment:
Q  208 tctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaag 306  Q
    ||||||||| |||| | | |||||||||||||| |||||| | | | |||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  14278806 tctacccatccataaagacaggtaggtggtccatcacagatccactaggggtaagcttcacatcaatcataatcaacataaacaaacataggcattcaag 14278707  T
Q  307 gatttcatgcataacacatatatatactcatccctcc 343  Q
    ||||||||||||||||||| || |||  |||||||||    
T  14278706 gatttcatgcataacacatttacataaccatccctcc 14278670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 213 - 342
Target Start/End: Complemental strand, 14302762 - 14302632
Alignment:
Q  213 ccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacattcaaggattt 311  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||| | |||||||| ||||||| |||| |||||||||  ||||||||||||||||||    
T  14302762 ccattcatacaaataggtaggcggtccaccacagaccactgggggttaacttcacattaatcatattcaagcataaacaattataaacattcaaggattt 14302663  T
Q  312 catgcataacacatatatatactcatccctc 342  Q
    ||||||| ||||||||| |||  ||||||||    
T  14302662 catgcatgacacatatacataaccatccctc 14302632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 345
Target Start/End: Original strand, 4482397 - 4482670
Alignment:
Q  86 aataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaag 179  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||| ||||||  |||||||||      ||||||||||||||||||||||||||||||||    
T  4482397 aataaacaatctagaataatcata-agacagacatcctagatcaaagcctatcctaagactctaatgaaacgataacggagatagctcccgctatccaag 4482495  T
Q  180 caatcaacaa---------------aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagctt 264  Q
    |||||| |||               |||||| |||||||  | ||||||||| |||||| | ||||||| |||| |   ||      |||||||||||||    
T  4482496 caatcaccaagcaactcaccaaagcaactaatcctgcacttcgtctacccatccatacagacaggtaggcggtcgaaatcac-----tgggggtaagctt 4482590  T
Q  265 cacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
     |||||||||||||||||||||||||||||||  |||||||||| |||||||||| |||||||| |||  |||||||||||    
T  4482591 tacatcaatcataatcaacataaacaaacataggcattcaagga-ttcatgcatagcacatatacataaccatccctccta 4482670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 345
Target Start/End: Complemental strand, 39294191 - 39293918
Alignment:
Q  92 caatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa-------cgataacggagatagctcccgctatccaagcaatc 184  Q
    |||||||||||||||||| ||| |  ||||||||||||||||||||  ||||||||||       |||||||||||||||||||||||||||||||||||    
T  39294191 caatctagaataatcataaagataggcatcctagatcagagcctaccataagactcaaaagaaaacgataacggagatagctcccgctatccaagcaatc 39294092  T
Q  185 aacaa-----------------aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcac 267  Q
    | |||                 |||||| | |||||  | ||| |||||||||||||| ||||||| | || |      || | ||||| ||||||||||    
T  39294091 atcaagcaactcaccaaaatcaaactaatcatgcacttcgtctgcccattcatacaaacaggtaggcgatcaaa-----accactggggctaagcttcac 39293997  T
Q  268 atcaatcataatcaacataaacaaacataaaca-ttcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||| |||  |||||||||||    
T  39293996 atcaatcataatcaacataaacaaacataagcatttcaaggatttcatgtataacacatatacataaccatccctccta 39293918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 17948136 - 17948008
Alignment:
Q  21 acatcatcataaaa--tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaac 118  Q
    ||||||||||||||  ||||||||  |||||| |||| |||| |||||| |||||||| || || ||||||| |||||||||||||||||| ||||| ||    
T  17948136 acatcatcataaaaattctccaaatcccgacaaatgggcaaa-tctcaacaacataaataaatccagaataaacaatctagaataatcata-agacagac 17948039  T
Q  119 atcctagatcagagcctactctaagactcaa 149  Q
    ||||||||||||||||||| |||||||||||    
T  17948038 atcctagatcagagcctaccctaagactcaa 17948008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 19065546 - 19065627
Alignment:
Q  255 gggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||| |||||||| |||||||    
T  19065546 gggttagcttcacatcaatcataatcatcataaacaaacataagcatttaaggatttcatgcatatcacatatacatactca 19065627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 15980559 - 15980465
Alignment:
Q  98 agaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggaga-tagctcccgctatccaagcaatca 185  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||      | |||||||||||| ||||||||||||||||||||||||    
T  15980559 agaataatcataaagatagacatcctagatcagagcctactctaagactctaaagaaccgataacggagattagctcccgctatccaagcaatca 15980465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 213 - 345
Target Start/End: Original strand, 3135414 - 3135547
Alignment:
Q  213 ccattcatacaaataggtaggtggtccaccaca-gactagtgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacattcaaggatt 310  Q
    ||||||||||||||||||||| |||| |||| | ||| | |||| || ||||||||| |  ||||||| || |||| |||| ||||| |||| |||||||    
T  3135414 ccattcatacaaataggtaggcggtcaaccaaacgaccactgggagttagcttcacaact-tcataattaagcatagacaagcataagcatttaaggatt 3135512  T
Q  311 tcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||| |||| |||||||||||    
T  3135513 tcatgcataacacatatacatacacatccctccta 3135547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 15305684 - 15305768
Alignment:
Q  197 cctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaa 282  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||||| | ||||||  ||||||||||  |||||||||||    
T  15305684 cctgcacgccgtctacccattcatacagataggtaggcggtccaccacagaccactgggggctagcttcacat-tatcataatcaa 15305768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 9323095 - 9323001
Alignment:
Q  93 aatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||| |||||||||||||| | |||||||||| |||||||||      ||| ||||||||||||||||||| |||||||||||    
T  9323095 aatctagaataatcata-agacaaacatcctaaagcagagcctaccctaagactctaaggaaactataacggagatagctcccgatatccaagcaa 9323001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 4598485 - 4598370
Alignment:
Q  175 ccaagcaatcaacaaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatc 274  Q
    |||||||| |||||||| ||  | |||||||| |||| |||||||||||||||||||||||||| |||| |||| | | ||||| ||||||||||| |||    
T  4598485 ccaagcaagcaacaaaaatactcttgcacgccgtctagccattcatacaaataggtaggtggtcaaccaaagaccact-ggggttagcttcacatc-atc 4598388  T
Q  275 ataatcaa-cataaacaa 291  Q
    ||||| || |||||||||    
T  4598387 ataattaagcataaacaa 4598370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 291
Target Start/End: Original strand, 13460599 - 13460677
Alignment:
Q  208 tctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
    |||||||||||||||||| ||||||| |||| |      |||| ||||||||||||| ||||||||||||||||||||||||||    
T  13460599 tctacccattcatacaaacaggtaggcggtcaaa-----actattgggggtaagctttacatcaatcataatcaacataaacaa 13460677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 15980386 - 15980303
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||||||||||||||| |||||||          |||| |||||||||| |||||||||||||||||| |||| |||||||||||    
T  15980386 tgggggtaagcttcacatcaatcattatcaaca----------taaaaattcaaggatatcatgcataacacatatacatacccatccctccta 15980303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 3193904 - 3193868
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    |||||||||||||||||||||||||||||||||||||    
T  3193904 ggggtaagcttcacatcaatcataatcaacataaaca 3193868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 320
Target Start/End: Original strand, 19381183 - 19381327
Alignment:
Q  175 ccaagcaatcaacaaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccacc-acagactagtgggggtaagcttcacatcaat 273  Q
    |||||||| ||||||| | |  |||||||| |  |||||||||||||||||||||||||||||| ||| |  ||| | |  |||| ||||||||||| ||    
T  19381183 ccaagcaagcaacaaagcaactcctgcacgacgcctacccattcatacaaataggtaggtggtcaaccgaacgaccact-agggttagcttcacatc-at 19381280  T
Q  274 cataatcaa-cataaacaaacataaacattcaaggatttcatgcataa 320  Q
    |||||| || |||||||||| |||| |||||||||| |||||||||||    
T  19381281 cataattaagcataaacaaatataagcattcaagga-ttcatgcataa 19381327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 9641239 - 9641276
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||||||||||||||| |||||||||||||||    
T  9641239 aacgataacggagatagctcccactatccaagcaatca 9641276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 336
Target Start/End: Original strand, 16206276 - 16206424
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccaca-gactagtggggg-taagcttcacatcaatcataatcaacataa 287  Q
    |||||| |||||| ||  |||||||||||||||||||||| ||| |||| | |  | ||| | |||||| | |||||||||||| |||||||||| |||     
T  16206276 aactaatcctgcaagctgtctacccattcatacaaataggcaggcggtcaatcgaacgaccactggggggttagcttcacatca-tcataatcaagatat 16206374  T
Q  288 ac--aaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |   ||| |||| |||||||||||| ||||||||||||||||| |||||||    
T  16206375 aataaaaaataagcattcaaggatt-catgcataacacatatacatactca 16206424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 28388635 - 28388670
Alignment:
Q  150 cgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||||||||| ||||||||||||||    
T  28388635 cgataacggagatagctcccgttatccaagcaatca 28388670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 9322931 - 9322893
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  9322931 tgggggtaagctttacatcaatcataatccacataaaca 9322893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 16088735 - 16088789
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatc 338  Q
    |||| ||||||||| ||||||||||||||||||||| |||| | | |||||||||    
T  16088735 ataatcaaacataagcattcaaggatttcatgcatagcacaaaaacatactcatc 16088789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 9058601 - 9058568
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    |||||| |||||||||||||||||||||||||||    
T  9058601 acgatagcggagatagctcccgctatccaagcaa 9058568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 18081291 - 18081209
Alignment:
Q  148 aacgataacggagat-agctcccgctatccaagcaatcaacaaaa----ctaaacctgcacgccatctacccattcatacaaa 225  Q
    ||||||||||||||| ||||||| ||||||||||| ||| |||||    |||  ||||||| || ||||||||||||||||||    
T  18081291 aacgataacggagattagctcccactatccaagcactcaccaaaagcaactactcctgcactccgtctacccattcatacaaa 18081209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 13452491 - 13452535
Alignment:
Q  247 actagtgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
    |||| ||||| ||| ||| ||||||||||||||||||||||||||    
T  13452491 actactggggataaactttacatcaatcataatcaacataaacaa 13452535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 69 - 345
Target Start/End: Complemental strand, 15551957 - 15551669
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctac-tctaagactc-----aacgataacggagat 162  Q
    |||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||     |||||||||||||||    
T  15551957 aacataaataagtctagaataaacaatctagaataatcataaagacaaacatcctagatcagagcctaaatctaagactccaagaaacgataacggagat 15551858  T
Q  163 agctcccgctatccaagcaat----caacaa-aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggg 256  Q
    |||||||| |||||||||||     |||||| |||||| | | |||  | ||||||||| |||||| | ||||||| |||||| |||||| | |  ||||    
T  15551857 agctcccggtatccaagcaactcaccaacaacaactaatcatacacttcgtctacccatccatacagacaggtaggcggtccatcacagatccacagggg 15551758  T
Q  257 gtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||  |||||||||||    
T  15551757 gtaagcttcacatcaatcataatcaacataaacaaacataggcattcaaggatttcatgcataacacatatacataaccatccctccta 15551669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 87 - 345
Target Start/End: Complemental strand, 25106383 - 25106121
Alignment:
Q  87 ataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa-------cgataacggagatagctcccgctatccaag 179  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||       |||||||| |||||| |||| |||||||||    
T  25106383 ataatcaatctagaataatcacaaagacaaacatcctagatcagagcctactctaagactcaaaagaaaacgataacgaagatagatccctctatccaag 25106284  T
Q  180 caatcaacaa---aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcat 276  Q
    || ||| |||   |||||  ||||||| || |||||||||||| ||||| ||||||| |||| |      |||| | |||||||||||||||||||||||    
T  25106283 cactcaccaagcaaactactcctgcactccgtctacccattcacacaaacaggtaggcggtcaaa-----actactaggggtaagcttcacatcaatcat 25106189  T
Q  277 aatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  25106188 aatcaacataaacaaatataagcattcaagga-ttcatgcataacacatatacataatcatccctccta 25106121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 62 - 345
Target Start/End: Complemental strand, 17760872 - 17760577
Alignment:
Q  62 tctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa------cgataa 155  Q
    |||||| |||||||| || || | ||||| |||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||| |      ||||||    
T  17760872 tctcaacaacataaataaatccataataaacaatctagaataatcataaagacagacatcctagatcagagcctagcctaagactctaaggaagcgataa 17760773  T
Q  156 cggagatagctcccgctatccaagcaa-tcaacaaaa-----ctaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-c 248  Q
    || |||||||||||||||| ||||||| ||| |||||     |||| |||||||||| ||||||||||||||||||||||||   |||||| |||||| |    
T  17760772 cgaagatagctcccgctatgcaagcaactcaccaaaaacaaactaatcctgcacgccgtctacccattcatacaaataggtaaccggtccatcacagatc 17760673  T
Q  249 tagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
     | | |||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||| |||||||| |||  |||||||||||    
T  17760672 cactaggggtaagcttcacatcaatcataatcaacatgaacaaacataggcattcaagga-ttcatgcatatcacatatacataaccatccctccta 17760577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 62 - 345
Target Start/End: Complemental strand, 19062192 - 19061897
Alignment:
Q  62 tctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa------cgataa 155  Q
    |||||| |||||||| || || | ||||| |||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||| |      ||||||    
T  19062192 tctcaacaacataaataaatccataataaacaatctagaataatcataaagacagacatcctagatcagagcctagcctaagactctaaggaagcgataa 19062093  T
Q  156 cggagatagctcccgctatccaagcaa-tcaacaaaa-----ctaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-c 248  Q
    || |||||||||||||||| ||||||| ||| |||||     |||| |||||||||| ||||||||||||||||||||||||   |||||| |||||| |    
T  19062092 cgaagatagctcccgctatgcaagcaactcaccaaaaacaaactaatcctgcacgccgtctacccattcatacaaataggtaaccggtccatcacagatc 19061993  T
Q  249 tagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
     | | |||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||| |||||||| |||  |||||||||||    
T  19061992 cactaggggtaagcttcacatcaatcataatcaacatgaacaaacataggcattcaagga-ttcatgcatatcacatatacataaccatccctccta 19061897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 69 - 345
Target Start/End: Complemental strand, 6817694 - 6817407
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagat 162  Q
    |||||||| || || | ||||| |||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||      |||||||| ||||||    
T  6817694 aacataaataaatccaaaataaacaatctagaataatcataaagactgacatcctagatcagagcctaccctaagactctaagcaaacgataatggagat 6817595  T
Q  163 agctcccgctatccaagcaa-tcaacaaaa----ctaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggg 256  Q
    |||||| |||||||||| || ||| |||||    |||| |||||||||| |||||||||||||||||| ||||||| |||||| || ||| | | | |||    
T  6817594 agctccagctatccaagaaactcaccaaaagcaactaatcctgcacgccgtctacccattcatacaaacaggtaggcggtccatcaaagatccactaggg 6817495  T
Q  257 gtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||||||| |||||||| |||  |||||||||||    
T  6817494 gtaagcttcacatcaatcataatcaacataaataaacataggcattcaaggattt-atgcatagcacatatacataaccatccctccta 6817407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 87 - 345
Target Start/End: Original strand, 17391132 - 17391382
Alignment:
Q  87 ataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaacgataacggagatagctcccgctatccaagcaatca- 185  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    |||||||||       ||||||||||||||| |||     
T  17391132 ataatcaatctcgaataatcataaagacaaacatcctagatcagagcctactctaagact----gataacgga-------cccgctatccaagcactcac 17391220  T
Q  186 ----acaa---aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataa 278  Q
        ||||   |||||  | |||||  | |||||||||||||||||| |||||||||||| |      || | | |||||||||||||||||||||||||    
T  17391221 cgaaacaagcaaactactcatgcacttcgtctacccattcatacaaacaggtaggtggtcaaa-----accactaggggtaagcttcacatcaatcataa 17391315  T
Q  279 tcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  17391316 tcaacattaacaaacataagcattcaaggatttcatgcataacacatatacatactcatccttccta 17391382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 32 - 345
Target Start/End: Original strand, 15988603 - 15988930
Alignment:
Q  32 aaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcaga 131  Q
    |||||||||||| ||| ||||||| |||| |||| |||||| |||    || || |||| |||||||||||||||||| || || |||||||||||||||    
T  15988603 aaatctccaaaacccgtcatatgggcaaaatctccataacacaaa----tccagcataaacaatctagaataatcataaaggcagacatcctagatcaga 15988698  T
Q  132 gcctactctaagactcaa-------cgataacggagatagctcccgctatccaagcaatcaacaa-----------------aactaaacctgcacgcca 207  Q
    |||||| ||| |||||||       |||||||||||||||||||| ||||||||||||||| |||                 |||||| |||||||  |     
T  15988699 gcctaccctatgactcaaaagaaaacgataacggagatagctcccactatccaagcaatcaccaagaaactcaccgaaagcaaactaatcctgcacttcg 15988798  T
Q  208 tctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaagg 307  Q
    |||||||||||||||||| ||||||| |||| |      || | ||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  15988799 tctacccattcatacaaacaggtaggcggtcaaa-----accactgggggtaagctttacatcaatcataatcaacataagcaaatataaacattcaagg 15988893  T
Q  308 atttcatgcataacacatatatatactcatccctccta 345  Q
    | ||||||||||||||||||| |||  |||||||||||    
T  15988894 a-ttcatgcataacacatatacataaccatccctccta 15988930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 14182268 - 14182175
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  14182268 tgggggttagcttcacatcaatcataatcaacataaacaaacataagcattcaaggatttcatgcataacacatatacatactcatccctccta 14182175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 5230712 - 5230551
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    ||||||||||||||  |||||| ||||  ||| |||| | |||||||| || | |||||||| |||||||||||||||||| ||||| ||||||||||||    
T  5230712 ataaaatctccaaatcccgacaaatgggtaaa-tctccacaacataaataaatatagaataaacaatctagaataatcataaagacagacatcctagatc 5230614  T
Q  129 agagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||| |||||||||      |||||||| |||||||||||||| ||||||||||||||    
T  5230613 agagcctaccctaagactcaaaggaaacgataatggagatagctcccgttatccaagcaatca 5230551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 40041441 - 40041369
Alignment:
Q  253 gggggtaagcttcacatcaatcataatcaacataaacaaacataaaca-ttcaaggatttcatgcataacaca 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40041441 gggggtaagcttcacatcaatcataatcaacataaacaaacataaacatttcaaggatttcatgcataacaca 40041369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 20419017 - 20419149
Alignment:
Q  202 acgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatc-aacataaacaaacataaaca 300  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| | | ||| | ||||||||||| ||||||||| |||| |||||| ||||||||    
T  20419017 acgccgtctacccattcatacaaataggtaggcggtccaccacagaccactagggct-agcttcacatc-atcataatcaaacacaaacaatcataaaca 20419114  T
Q  301 ttcaaggatttcatgcataacacatatatatactca 336  Q
    || ||||| ||||||||||||||||||| |||||||    
T  20419115 tttaagga-ttcatgcataacacatatacatactca 20419149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 345
Target Start/End: Original strand, 8602486 - 8602680
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaatcaacaaa---actaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccac 244  Q
    |||||||||||||||||||||||||||  ||||||||| |||    ||||| |||||||  | ||||||||| |||||| | ||||||  |||| |        
T  8602486 aacgataacggagatagctcccgctataaaagcaatcaccaagcagactaatcctgcacttcgtctacccatccatacagacaggtagacggtcaaa--- 8602582  T
Q  245 agactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctcct 344  Q
      || | ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||| |||||||| |||  ||||||||||    
T  8602583 --accactgggggtaagctttacatcaatcataatcaacataaacaaacataggcattcaagga-ttcatgcatatcacatatacataaccatccctcct 8602679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 31414511 - 31414422
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctc 342  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| |||  ||||||||    
T  31414511 tgggggtaagctttacatcaatcataatcaacataaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctc 31414422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 37918775 - 37918681
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaaca-ttcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| || |||||  ||||||||||||||||||||| |||  |||||||||||    
T  37918775 tgggggtaagctttacatcaatcataatcaacataaacaaacataagcatttcaataatttcatgcataacacatatacataaccatccctccta 37918681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 38378128 - 38378055
Alignment:
Q  272 atcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  |||||||||||    
T  38378128 atcataatcaacataaacaaacataagcattcaaggatttcatgcataacacatatacataaacatccctccta 38378055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 43429648 - 43429478
Alignment:
Q  21 acatcatcataaaa--tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaac 118  Q
    ||||||||||||||  ||||||||  || ||| |||| |||| |||| | |||||||| || || ||||||| ||||||||||||||| || ||||| ||    
T  43429648 acatcatcataaaaattctccaaatcccaacaaatgggcaaa-tctccacaacataaataaatccagaataaacaatctagaataatctta-agacatac 43429551  T
Q  119 atcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||||||| |||||||||      ||| |||||||||||| |||||| ||||||||||||||    
T  43429550 atcctagatcagagcctaccctaagactctaaggaaacaataacggagatatctcccgatatccaagcaatca 43429478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 5230469 - 5230400
Alignment:
Q  255 gggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacaca 324  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  5230469 gggtaaactttacatcaatcataatcaacataaacaaacataagcattcaaggatttcatgcatcacaca 5230400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 266 - 345
Target Start/End: Complemental strand, 38813257 - 38813179
Alignment:
Q  266 acatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| |||  |||||||||||    
T  38813257 acatcaatcataatcaacataaacaaatataagcattcaagga-ttcatgcataacacatatacataaccatccctccta 38813179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 17320684 - 17320518
Alignment:
Q  25 catcataaaa--tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcc 122  Q
    ||||||||||  ||||||||  |||||| |||| |||| |||| | |||||||| || || | ||||| |||||||||||||||||| ||||| ||||||    
T  17320684 catcataaaaattctccaaatcccgacaaatgggcaaa-tctccacaacataaataaatccaaaataaacaatctagaataatcata-agacagacatcc 17320587  T
Q  123 tagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||| ||| |||||      ||||| ||||||||||||||||  ||||||||||||||    
T  17320586 tagatcagagcctaccctaggactctaaggaaacgacaacggagatagctcccaatatccaagcaatca 17320518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 345
Target Start/End: Original strand, 12950836 - 12950971
Alignment:
Q  210 tacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaagga 308  Q
    |||||||  ||||| | ||||||| |||||| |||||| | | ||||||||||  | ||||||||||||||||||||||||||| |||| ||||||||||    
T  12950836 tacccatctatacagacaggtaggcggtccatcacagatccactgggggtaagtattacatcaatcataatcaacataaacaaatataagcattcaagga 12950935  T
Q  309 tttcatgcataacacatatatatactcatccctccta 345  Q
     |||||||||||| |||||| |||  ||||| |||||    
T  12950936 -ttcatgcataacccatatacataaccatccatccta 12950971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 291
Target Start/End: Original strand, 10902661 - 10902805
Alignment:
Q  148 aacgataacggagat-agctcccgctatccaagcaatcaacaaaactaaac-----ctgcacgccatctacccattcatacaaataggtaggtggtccac 241  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||  ||||     |||||  || |||||||||||||||||| ||||||| |||| |     
T  10902661 aacgataacggagattagctcccgctatccaagcactcaccaaaagcaaactactcctgcattccgtctacccattcatacaaacaggtaggcggtcaaa 10902760  T
Q  242 cacagactagtgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
         || | ||||||||||||||| ||||||||||||||||||||||||    
T  10902761 -----accactgggggtaagcttcatatcaatcataatcaacataaacaa 10902805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 287
Target Start/End: Complemental strand, 11517558 - 11517291
Alignment:
Q  21 acatcatcataaaa-tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaaca 119  Q
    |||||||||||||| |||||||   ||||||||||| ||||  ||||| ||||   | ||||| || ||||| ||||||||||||||||  | ||| |||    
T  11517558 acatcatcataaaaatctccaagtcccgacatatgggcaaaaactcaacaaca---ataattc-agcataattaatctagaataatcatggaaacagaca 11517463  T
Q  120 tcctagatcagagcctactctaagactc-------aacgataacggagatagctcccgctatccaagca---atcaacaaaactaaacctgcacgccatc 209  Q
    |||||||| ||||||||| |||||||||       |||||||||||||||||||||| | |||||||||   | ||| |||||||  | |||||  | ||    
T  11517462 tcctagatgagagcctaccctaagactcaaaagaaaacgataacggagatagctcccaccatccaagcactcaccaagaaaactactcatgcacttcgtc 11517363  T
Q  210 tacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataa 287  Q
    |||||||||||||||| ||||| | |||      || | |  | ||||| ||||||||||||||||||||||||||||    
T  11517362 tacccattcatacaaacaggtatgcggt------caaaatcattggggttagcttcacatcaatcataatcaacataa 11517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 31416305 - 31416187
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagat 162  Q
    |||||||| || |||||||||| |||||||||||||| ||| ||||| ||||||||||| ||||| ||  |||||||||      || |||||| |||||    
T  31416305 aacataaataaatctagaataaacaatctagaataattata-agacagacatcctagattagagcatatcctaagactctaaggaaatgataacagagat 31416207  T
Q  163 agctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||    
T  31416206 agctcccgctatccaagcaa 31416187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 11822618 - 11822734
Alignment:
Q  175 ccaagcaatcaacaaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatc 274  Q
    ||||||||  ||||||||||  |||||||||| |||||||||||||||||||||||||| |||| | || |||| |  | |||| ||||||||||| |||    
T  11822618 ccaagcaagaaacaaaactactcctgcacgccttctacccattcatacaaataggtaggcggtcaatcaaagaccatagagggttagcttcacatc-atc 11822716  T
Q  275 ataatcaa-cataaacaa 291  Q
    ||||| || |||||||||    
T  11822717 ataattaagcataaacaa 11822734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 290
Target Start/End: Original strand, 41659810 - 41659951
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaa-tcaacaaa---actaaacctgcacgccatctacccattcatacaaataggtaggtggtccacca 243  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||   | ||| |||||||  | ||||||||| |||||| | ||||||| ||||         
T  41659810 aacgataacggagatagctcccgctatccaagcaactcaccaaagcgattaatcctgcacttcgtctacccatccatacagacaggtaggcggtc----- 41659904  T
Q  244 cagactagtgggggtaagcttcacatcaatcataatcaacataaaca 290  Q
     | || | ||||||||||||| ||||||||||||||| |||||||||    
T  41659905 aaaaccactgggggtaagctttacatcaatcataatccacataaaca 41659951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 3295207 - 3295152
Alignment:
Q  281 aacataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  3295207 aacataatcaaacataagcattcaaagatttcatgcataacacatatacatactca 3295152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 4655436 - 4655489
Alignment:
Q  283 cataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| | |||||||    
T  4655436 cataatcaaacataagcattcaaggatttcatgcataacacatacacatactca 4655489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 14819824 - 14819788
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||||||||||||||||||||||||||||||    
T  14819824 acgataacggagatagctcccgctatccaagcaatca 14819788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 14968084 - 14968167
Alignment:
Q  201 cacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaa 288  Q
    |||||| |||||||||||||||||| ||||||  |||| |    |||| | ||||||| || ||||||||||||||||||||||||||    
T  14968084 cacgccgtctacccattcatacaaacaggtagacggtcaa----agaccactgggggttagtttcacatcaatcataatcaacataaa 14968167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 25487656 - 25487602
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatc 338  Q
    |||| |||||||||||||||||||||||||| |||| |||||||| ||| |||||    
T  25487656 ataatcaaacataaacattcaaggatttcattcatatcacatatacatattcatc 25487602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 6230637 - 6230604
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||||||||||||||||    
T  6230637 acgataacggagatagctcccgctatccaagcaa 6230604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 12490749 - 12490652
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataa 287  Q
    |||||| |||||||  | ||||||||| |||||||| |||||||||||||| |||||| | | ||||||||||  | ||||| ||||||||| ||||||    
T  12490749 aactaatcctgcacaacgtctacccatccatacaaacaggtaggtggtccatcacagatccactgggggtaagtattacatc-atcataatccacataa 12490652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 21168683 - 21168649
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaa 182  Q
    |||||||||||||||| ||||||||||||||||||    
T  21168683 aacgataacggagataactcccgctatccaagcaa 21168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 4147671 - 4147638
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||||||||| ||||||    
T  4147671 acgataacggagatagctcccgctatctaagcaa 4147638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 33371345 - 33371312
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    |||||| |||||||||||||||||||||||||||    
T  33371345 acgatagcggagatagctcccgctatccaagcaa 33371312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 7254432 - 7254535
Alignment:
Q  175 ccaagcaatcaacaaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccaca-gactagtgggggtaagcttcacatcaat 273  Q
    |||||||| ||||||| |||  ||| |||| | | ||| |||||||||||||||||||| |||| |||| | ||| | ||||||| |||||||||| |||    
T  7254432 ccaagcaagcaacaaagctactcctacacgacgtttactcattcatacaaataggtaggcggtcaaccaaacgaccactgggggttagcttcacat-aat 7254530  T
Q  274 cataa 278  Q
    |||||    
T  7254531 cataa 7254535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 30177639 - 30177591
Alignment:
Q  197 cctgcacgccatctacccattcatacaaataggtaggtggtccaccaca 245  Q
    ||||||| || |||||||||||||||||||||| ||| |||| ||||||    
T  30177639 cctgcacaccgtctacccattcatacaaataggcaggcggtcaaccaca 30177591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 38378248 - 38378204
Alignment:
Q  148 aacgataacggagat-agctcccgctatccaagcaatcaacaaaa 191  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||    
T  38378248 aacgataacggagattagctcccgctatccaagcactcaccaaaa 38378204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 43429400 - 43429368
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaaca 284  Q
    ||||||||||||| |||||||||||||||||||    
T  43429400 tgggggtaagctttacatcaatcataatcaaca 43429368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 29 - 345
Target Start/End: Original strand, 16131329 - 16131664
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    ||||||||||||||  ||||||||||| |||| |||| | ||||||||||| || ||| |||||||||||||||||||||| ||||| ||||||||||||    
T  16131329 ataaaatctccaaatcccgacatatgggcaaaatctccacaacataaacaaatccagattaatcaatctagaataatcataaagacagacatcctagatc 16131428  T
Q  129 agagcctactctaagactc-------aacgataacggagatagctcccgctatccaagcaatcaaca-----------------aaactaaacctgcacg 204  Q
    ||||||||| |||||||||       ||||||||||||||||||||| | ||||||| |||||| ||                 ||||||| |||||||     
T  16131429 agagcctaccctaagactcaaaagaaaacgataacggagatagctcctgttatccaaacaatcaccaagcaactcaccaaaagcaaactaatcctgcact 16131528  T
Q  205 ccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattca 304  Q
     | |||||||||||||||||| ||||||||||||      | || | ||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  16131529 tcgtctacccattcatacaaacaggtaggtggtc-----aaaaccactggggataagcttcacatcaatcataatcaacataaacaaacataagcattca 16131623  T
Q  305 aggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||| ||||||| |||  |||||||||||    
T  16131624 aggatttcatgcataaaacatatacatatccatccctccta 16131664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 23219619 - 23219708
Alignment:
Q  257 gtaagcttcacatcaatcataatcaacataaacaaacataaaca-ttcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||  |||||||||||    
T  23219619 gtaagcttcacatcaatcataatcaacataaacaaacataagcatttcaaggatttcatgcataacacatatacataaccatccctccta 23219708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 31163227 - 31163090
Alignment:
Q  208 tctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaaca-taaacaaacataaacattcaag 306  Q
    |||||||||||||||||||||||||| ||||||||| |||| | ||||  || ||||||||| |||||||| ||| | ||| ||||||||| ||||||||    
T  31163227 tctacccattcatacaaataggtaggcggtccaccatagaccactgggatta-gcttcacatgaatcataaacaagaataagcaaacataagcattcaag 31163129  T
Q  307 gatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||| ||||||||| |||||| |||| |||||||||||    
T  31163128 gattttatgcataactcatatacatacccatccctccta 31163090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 345
Target Start/End: Complemental strand, 29162976 - 29162684
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa------cgataacggagat 162  Q
    |||||||| || || ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |      |||||||||||||    
T  29162976 aacataaataaatccagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggatacgataacggagat 29162877  T
Q  163 agctcccgctat-----------ccaagcaa-tcaacaaaa----ctaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacag 246  Q
    |||||||| |||           |||||||| ||| |||||    |||  |||||||  | || |||||| |||||| | ||||||| |||| |          
T  29162876 agctcccgatatccaagcaatcaccaagcaactcaccaaaagcaactagtcctgcacttcgtccacccatccatacagacaggtaggcggtcaaa----- 29162782  T
Q  247 actagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    || | ||||||||||||| |||||| || |||||||||||||||||||||  |||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  29162781 accattgggggtaagctttacatcagtcctaatcaacataaacaaacataggcattcaagga-ttcatgcataacacatatacatagtcatccctccta 29162684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 346
Target Start/End: Complemental strand, 4174636 - 4174485
Alignment:
Q  197 cctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaac------a 290  Q
    |||||||||| ||||||||| |||||||| ||||||| |||| |    |||| | ||||||| ||||||||||||||||||||||||||||||      |    
T  4174636 cctgcacgccgtctacccatccatacaaacaggtaggcggtcaa----agaccactgggggttagcttcacatcaatcataatcaacataaacaatttta 4174541  T
Q  291 aacataaacattcaaggatttcatgcataacacatatatatactcatccctcctat 346  Q
    || |||| ||||||||||||||||| ||| |||||||| |||||||||||| ||||    
T  4174540 aagataagcattcaaggatttcatgtatatcacatatacatactcatcccttctat 4174485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 198 - 346
Target Start/End: Complemental strand, 4230264 - 4230114
Alignment:
Q  198 ctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaac------aa 291  Q
    ||||||||| ||||||||| |||||||| ||||||| |||| |    |||| | ||||||| ||||||||||||||||||||||||||||||      ||    
T  4230264 ctgcacgccgtctacccatccatacaaacaggtaggcggtcaa----agaccactgggggttagcttcacatcaatcataatcaacataaacaattttaa 4230169  T
Q  292 acataaacattcaaggatttcatgcataacacatatatatactcatccctcctat 346  Q
    | |||| ||||||||||||||||| ||| |||||||| |||||||||||| ||||    
T  4230168 agataagcattcaaggatttcatgtatatcacatatacatactcatcccttctat 4230114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 28 - 345
Target Start/End: Original strand, 21929512 - 21929843
Alignment:
Q  28 cataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagat 127  Q
    |||||||||||||||| | ||||||||| |||| |||| |||||| |||    || |  |||| |||||||||| ||||||| |||||||||||||||||    
T  21929512 cataaaatctccaaaaccggacatatgggcaaaatctccataacaaaaa----tccaacataaacaatctagaacaatcataaagacaaacatcctagat 21929607  T
Q  128 cagagcctactctaagactcaa-------cgataacggagatagctcccgctatccaagcaatcaacaa-----------------aactaaacctgcac 203  Q
    || |||||||  || |||||||       |||||||||||||||||||| ||||||||||||||| |||                 |||||| | ||||     
T  21929608 catagcctaccttatgactcaaaagaaaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccgaaagcaaactaatcatgcat 21929707  T
Q  204 gccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattc 303  Q
      | |||||||||||||||||| ||||||| |||| |      || | ||| |||||| || |||||||||||||||||||||| ||||||||| |||||    
T  21929708 ttcgtctacccattcatacaaacaggtaggcggtcaaa-----accactggaggtaaggtttacatcaatcataatcaacataagcaaacataagcattc 21929802  T
Q  304 aaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||| ||||||||||||||||||| |||  |||| ||||||    
T  21929803 aagga-ttcatgcataacacatatacataaccatctctccta 21929843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 22468214 - 22468047
Alignment:
Q  25 catcataaaa--tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcc 122  Q
    ||||||||||  ||||||||  |||||| ||||||||| |||| | |||||||| || || ||||||| |||||||||||||||||| | ||| ||||||    
T  22468214 catcataaaaattctccaaatcccgacaaatggacaaa-tctccacaacataaataaatccagaataaacaatctagaataatcataaaaacagacatcc 22468116  T
Q  123 tagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    | ||| ||||||||| |||| ||||      |||||||||||||||||||||| |||||||||||||||    
T  22468115 ttgattagagcctaccctaaaactctaaggaaacgataacggagatagctcccactatccaagcaatca 22468047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 22595707 - 22595601
Alignment:
Q  84 agaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatcca 177  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||||||  |||||||||      ||||||||||||||||||||||||||||||    
T  22595707 agaataaacaatctagaataatcata-agatagacatcctagatcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatcca 22595609  T
Q  178 agcaatca 185  Q
    ||||||||    
T  22595608 agcaatca 22595601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 16374231 - 16374368
Alignment:
Q  197 cctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacata 296  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||| || || | | ||||| |||||||||||||||||||  |  ||||| |||||||    
T  16374231 cctgcatgccatctacccattcatataaataggtaggcggtccaccgcataccact-ggggttagcttcacatcaatcataacaagaataaagaaacata 16374329  T
Q  297 aacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||||||||||| ||||||||| ||| ||| | |||||||    
T  16374330 aacattcaagga-ttcatgcatgacaaatacacatactca 16374368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 23219113 - 23219268
Alignment:
Q  93 aatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa-------cgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||       ||||||||||||||  | |||||||||||||| |||    
T  23219113 aatctagaataatcataaagacagacatcctagatcagagcctactctacgactcaagaggaaccgataacggagataaattccgctatccaagcactca 23219212  T
Q  186 aca---aaactaaacctgcacgccatctacccattcatacaaataggtaggtggtc 238  Q
     ||   ||||||  ||||||| |  |||||||||||||||||| ||||||| ||||    
T  23219213 ccaagcaaactactcctgcactctgtctacccattcatacaaacaggtaggcggtc 23219268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 34965044 - 34965165
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa------cgataacggagat 162  Q
    |||||||| || || ||||||| |||||||||||| ||||| ||||| | | ||||||||||||||||| |||||||||||      |||||||||||||    
T  34965044 aacataaataaatccagaataaacaatctagaatagtcata-agacagaaaacctagatcagagcctaccctaagactcaaaggaaacgataacggagat 34965142  T
Q  163 agctcccgctatccaagcaatca 185  Q
    |||||||||||||||||||||||    
T  34965143 agctcccgctatccaagcaatca 34965165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 15006678 - 15006584
Alignment:
Q  93 aatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||      |||||||| |||||||| |||||||||||||||||    
T  15006678 aatctagaataatcata-agacagacatcctagatcagagcctatcctaagactctaaggaaacgataatggagataggtcccgctatccaagcaa 15006584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 15295552 - 15295494
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagat 127  Q
    |||||||| || || |||||||||||||||||||||||||||| ||| |||||||||||    
T  15295552 aacataaataaatccagaataatcaatctagaataatcatacatacagacatcctagat 15295494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 6777767 - 6777819
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||| |||||||    
T  6777767 ataatcaaacataagcattcaaggatttcatgcatagcacatatacatactca 6777819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 17858314 - 17858215
Alignment:
Q  187 caaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacata 286  Q
    ||||||||  ||||||| || |||||||||| ||||||| ||||||| |||| |      || | ||| |||||||||||||||||||||||||||||||    
T  17858314 caaaactactcctgcactccgtctacccatttatacaaacaggtaggcggtcaaa-----accactggaggtaagcttcacatcaatcataatcaacata 17858220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 17375589 - 17375555
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaa 288  Q
    |||||||||||||||||||||||||||||||||||    
T  17375589 ggggtaagcttcacatcaatcataatcaacataaa 17375555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 12478476 - 12478424
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| ||||||||| ||||||||||||| ||||||| |||||||| |||||||    
T  12478476 ataatcaaacataagcattcaaggattttatgcatagcacatatacatactca 12478424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 14487496 - 14487460
Alignment:
Q  197 cctgcacgccatctacccattcatacaaataggtagg 233  Q
    |||||||||| ||||||||||||||||||||||||||    
T  14487496 cctgcacgccgtctacccattcatacaaataggtagg 14487460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 31469517 - 31469485
Alignment:
Q  150 cgataacggagatagctcccgctatccaagcaa 182  Q
    |||||||||||||||||||||||||||||||||    
T  31469517 cgataacggagatagctcccgctatccaagcaa 31469485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 19852461 - 19852495
Alignment:
Q  151 gataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||| |||||||||||||||||||||||||||    
T  19852461 gataacgaagatagctcccgctatccaagcaatca 19852495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 22846314 - 22846347
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    |||||||||||||||||| |||||||||||||||    
T  22846314 acgataacggagatagctaccgctatccaagcaa 22846347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 19852574 - 19852610
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  19852574 ggggtaagctttacatcaatcataatccacataaaca 19852610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 5e-50; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 20456484 - 20456331
Alignment:
Q  199 tgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataa 297  Q
    |||||||| |||||||||||||||||| ||||||| |||||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  20456484 tgcacgccgtctacccattcatacaaacaggtaggcggtccatcacagatctagtggg--taagcttcacatcaatcataatcaacataaacaaacataa 20456387  T
Q  298 acattcaaggatttcatgcataacacatatatatactcatccctcctatgatacta 353  Q
     |||||||||||||||||||||||||||||| |||  |||||||||||| ||||||    
T  20456386 gcattcaaggatttcatgcataacacatatacataaccatccctcctataatacta 20456331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 29 - 345
Target Start/End: Original strand, 11963669 - 11964005
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    ||||||||||||||  | |||| |||| |||| |||| | || ||||| || |||||||||| ||||||||||||   ||| ||||| ||||||||||||    
T  11963669 ataaaatctccaaatcctgacaaatgggcaaa-tctccacaatataaataaatctagaataaacaatctagaatagatataaagacagacatcctagatc 11963767  T
Q  129 agagcctactctaagactca----acgataacggagatagctcccgctatccaagcaatcaacaa-----------------aactaaacctgcacgcca 207  Q
    |||| |||| || |||||||    ||||||||| ||||||||||||||||||||||||||| |||                 |||||| ||||||| ||     
T  11963768 agagtctaccctcagactcaggaaacgataacgaagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagcaaactaatcctgcaccccg 11963867  T
Q  208 tctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaag 306  Q
    |||||  | ||||||||| ||||||| |||||| |||||| | | |||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  11963868 tctactaagtcatacaaacaggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataggcattcaag 11963967  T
Q  307 gatttcatgcataacacatatatatactcatccctccta 345  Q
    || ||||||||||||| ||||| ||| ||||||||||||    
T  11963968 ga-ttcatgcataacatatatacataatcatccctccta 11964005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 92 - 345
Target Start/End: Complemental strand, 14345708 - 14345432
Alignment:
Q  92 caatctagaataatcatacagacaaacatcctagatcagagcctac-tctaagactc-----aacgataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||     |||||||||||||||||||||||||||||| |||||||    
T  14345708 caatctagaataatcataaagacagacatcctagatcaaagcctacatctaagactccaagaaacgataacggagatagctcccgctatccacgcaatca 14345609  T
Q  186 acaaa-----------------actaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcac 267  Q
     ||||                 ||||| | |||||||  |||||||||||||||||| | ||||| |||||| |||||| | | | ||||||||||||||    
T  14345608 ccaaacaactcaccgaaagcaaactaatcttgcacgctgtctacccattcatacaaacaagtaggcggtccatcacagatccatttggggtaagcttcac 14345509  T
Q  268 atcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    || |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| ||||||||||||    
T  14345508 attaatcataatcaacataaacaaacatagacattaaagga-ttcatgcataacacatatacataatcatccctccta 14345432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 29 - 238
Target Start/End: Complemental strand, 11765811 - 11765596
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    |||||||||| |||||||||||||||| |||| |||||| ||||||||    || || | || |||||||||||||||||| ||||| ||||||||||||    
T  11765811 ataaaatctc-aaaatccgacatatgggcaaaatctcaacaacataaa----tccagcaaaagcaatctagaataatcataaagacagacatcctagatc 11765717  T
Q  129 agagcctactctaagactc-----aacgataacggagatagctcccgctatccaagcaatcaaca------aaactaaacctgcacgccatctacccatt 217  Q
    |||||||||||||| ||||     | ||||||||||||||||||||||||||||| || ||| ||      ||||||  ||||||| |||||||||||||    
T  11765716 agagcctactctaaaactccaaagaccgataacggagatagctcccgctatccaatcactcaccaaaaagcaaactactcctgcactccatctacccatt 11765617  T
Q  218 catacaaataggtaggtggtc 238  Q
    |||||||||||||||| ||||    
T  11765616 catacaaataggtaggcggtc 11765596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 23236452 - 23236349
Alignment:
Q  87 ataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagc 180  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||      |||||||||||||||||||||||||||| ||||    
T  23236452 ataaacaatctagaataatcata-agacagacatcctagatcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatctaagc 23236354  T
Q  181 aatca 185  Q
    |||||    
T  23236353 aatca 23236349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 343
Target Start/End: Complemental strand, 5453210 - 5453075
Alignment:
Q  208 tctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaag 306  Q
    ||||||||| |||||| ||||||||| ||| || |||||| | | | ||||||||  | ||||||||||||||||||||||||||| |||| ||||||||    
T  5453210 tctacccatccatacagataggtaggcggttcatcacagatccatttggggtaagtattacatcaatcataatcaacataaacaaatataagcattcaag 5453111  T
Q  307 gatttcatgcataacacatatatatactcatccctcc 343  Q
    || ||||||||||| ||||||| |||  |||||||||    
T  5453110 ga-ttcatgcataagacatatacataaccatccctcc 5453075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 19871981 - 19872147
Alignment:
Q  25 catcataaaat-ctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcct 123  Q
    ||||||||||| |||||||  |||||| |||  |||| |||| | |||||||| || || | ||||| |||| ||||||||||||| ||||| ||||| |    
T  19871981 catcataaaattctccaaatcccgacaaatgagcaaa-tctccacaacataaataaatcaaaaataaacaatatagaataatcataaagacagacatcgt 19872079  T
Q  124 agatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||||||| |||||||||      ||| |||| |||||||||||||||||||||||||||||    
T  19872080 agatcagagcctaccctaagactctaaagaaacaataatggagatagctcccgctatccaagcaatca 19872147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 345
Target Start/End: Complemental strand, 24227864 - 24227706
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagact-agtgggggtaagcttcacatcaatcataatc---aacat 285  Q
    |||||| |||||||  | |||||||||  ||||| | |||||||||||||| |||| |   | |||||||||||||||||||||||||||||   || ||    
T  24227864 aactaatcctgcacaacgtctacccatctatacagacaggtaggtggtccatcacataaacactgggggtaagcttcacatcaatcataatcaataaaat 24227765  T
Q  286 aaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||  |||||||||| |||||||||| |||||||| |||  |||||||||||    
T  24227764 aaacaaacatatgcattcaagga-ttcatgcatagcacatatacataaccatccctccta 24227706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 33628318 - 33628208
Alignment:
Q  87 ataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa-------cgataacggagatagctcccgctatccaag 179  Q
    |||| |||||||||||||||||| ||||| ||||| |||||||||||||||  ||||||||||       | |||||||||||| |||||||||||||||    
T  33628318 ataaacaatctagaataatcataaagacagacatcttagatcagagcctaccataagactcaaaaggaaccaataacggagataactcccgctatccaag 33628219  T
Q  180 caatcaacaaa 190  Q
    |||||| ||||    
T  33628218 caatcaccaaa 33628208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 332
Target Start/End: Original strand, 3671690 - 3671814
Alignment:
Q  208 tctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaag 306  Q
    ||||||||| |||||| | ||||||| |||||| |||||| | | | ||||||||  | | |||||||||||| |||||||||||| |||| ||||||||    
T  3671690 tctacccatccatacagacaggtaggcggtccatcacagatccactaggggtaagtattatatcaatcataattaacataaacaaatataagcattcaag 3671789  T
Q  307 gatttcatgcataacacatatatata 332  Q
    || |||| |||||||| |||||||||    
T  3671790 ga-ttcacgcataacatatatatata 3671814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 321
Target Start/End: Complemental strand, 16837722 - 16837553
Alignment:
Q  152 ataacggagat-agctcccgctatccaagcaatcaacaaaactaaac-----ctgcacgccatctacccattcatacaaataggtaggtggtccaccaca 245  Q
    ||||||||||| ||||||||||||||||||| ||| |||||  ||||     ||||||  | ||||||||| |||||| | |||||||||||| |         
T  16837722 ataacggagattagctcccgctatccaagcactcaccaaaagcaaactactcctgcacttcgtctacccatccatacagacaggtaggtggtcaaa---- 16837627  T
Q  246 gactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataac 321  Q
     || | |||| |||| ||| |||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||    
T  16837626 -accactgggagtaaactttacatcaattataatcaacataaacaaatataagcattcaagga-ttcatgcataac 16837553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 11765573 - 11765512
Alignment:
Q  292 acataaacattcaaggatttcatgcataacacatatatatactcatccctcctatgatacta 353  Q
    |||||| |||||||||||||||||||||||||||||| |||   ||||||||||| ||||||    
T  11765573 acataagcattcaaggatttcatgcataacacatatacataacaatccctcctataatacta 11765512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 19872225 - 19872264
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  19872225 tgggggtaagctttacatcaatcataatcaacataaacaa 19872264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 3420810 - 3420768
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaatcaacaaa 190  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  3420810 aacgataacggagatagcttccgctatccaagcaatcaccaaa 3420768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 23412256 - 23412294
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  23412256 tggggttaagcttcacatcaatcataatcaacataaaca 23412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 24082309 - 24082342
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||||||||||||||||    
T  24082309 acgataacggagatagctcccgctatccaagcaa 24082342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 5623396 - 5623362
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaa 182  Q
    |||||||||||||||| ||||||||||||||||||    
T  5623396 aacgataacggagataactcccgctatccaagcaa 5623362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 6454900 - 6454933
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||| ||||||||||||    
T  6454900 acgataacggagatagctcccactatccaagcaa 6454933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 10179007 - 10178956
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| ||||||||||||||||| || |||||||||| |||||||| |||||||    
T  10179007 ataatcaaacataaacattcaaaga-ttcatgcatagcacatatacatactca 10178956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 23236272 - 23236240
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaaca 284  Q
    ||||||||||||| |||||||||||||||||||    
T  23236272 tgggggtaagctttacatcaatcataatcaaca 23236240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 291
Target Start/End: Complemental strand, 247896 - 247625
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    |||||||||||||| ||| |||||||| |||| |||||||||||| ||    || || ||||||||||||||| ||||||| |||||||||||||||||     
T  247896 ataaaatctccaaa-tcccacatatgggcaaaatctcaataacatgaa----tccagcataatcaatctagaacaatcataaagacaaacatcctagatt 247802  T
Q  129 agagcctactctaagactcaa-----cgataacggagatagctcccgctatccaagcaatcaacaa---------aactaaacctgcacgccatctaccc 214  Q
    |||||||||||||||| || |     |||||||| |||||||||||||||||| |||| | | |||         ||| |  |||||||||| |||||||    
T  247801 agagcctactctaagattccaaagaccgataacgaagatagctcccgctatccgagcacttaccaagcaaccaacaacaactcctgcacgccgtctaccc 247702  T
Q  215 attcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
    ||||||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||    
T  247701 attcatacaaataggtaggcggtccaccacagaccattgggggttagcttcacatcaatcataatcaacaaaaacaa 247625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 291
Target Start/End: Original strand, 14569480 - 14569751
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    |||||||||||||| ||| |||||||| |||| |||||||||||| ||    || || ||||||||||||||| ||||||| |||||||||||||||||     
T  14569480 ataaaatctccaaa-tcccacatatgggcaaaatctcaataacatgaa----tccagcataatcaatctagaacaatcataaagacaaacatcctagatt 14569574  T
Q  129 agagcctactctaagactcaa-----cgataacggagatagctcccgctatccaagcaatcaacaa---------aactaaacctgcacgccatctaccc 214  Q
    |||||||||||||||| || |     |||||||| |||||||||||||||||| |||| | | |||         ||| |  |||||||||| |||||||    
T  14569575 agagcctactctaagattccaaagaccgataacgaagatagctcccgctatccgagcacttaccaagcaaccaacaacaactcctgcacgccgtctaccc 14569674  T
Q  215 attcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
    ||||||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||    
T  14569675 attcatacaaataggtaggcggtccaccacagaccattgggggttagcttcacatcaatcataatcaacaaaaacaa 14569751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 199 - 345
Target Start/End: Complemental strand, 5373040 - 5372894
Alignment:
Q  199 tgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataa 297  Q
    |||||||| |||||||||||||||||| ||||||| |||||| |||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  5373040 tgcacgccgtctacccattcatacaaacaggtaggcggtccatcacatatctactgggg-taagcttcacatcaatcataatcaacataaacaaacataa 5372942  T
Q  298 acattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
     |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  5372941 gcattcaaggatttcatgcataacacatatacataatcatccctccta 5372894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 32 - 345
Target Start/End: Complemental strand, 54366172 - 54365855
Alignment:
Q  32 aaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcaga 131  Q
    |||||||||||| ||||||||||| |||| || | |||| | |||    || || |||| |||||||||||||||||| ||||| |||||||||||||||    
T  54366172 aaatctccaaaacccgacatatgggcaaaatccccataatacaaa----tccagcataaacaatctagaataatcataaagacatacatcctagatcaga 54366077  T
Q  132 gcctactctaagactcaa-------cgataacggagatagctcccgctatccaagcaa-tcaacaaaactaaa-----cctgcacgccatctacccattc 218  Q
    | |||| |||||||||||       ||||||||||||||||||| ||||||||||||| ||| |||||  |||     |||||||  | |||||||||||    
T  54366076 gtctaccctaagactcaaaaggaaacgataacggagatagctcctgctatccaagcaactcaccaaaagcaaattaatcctgcacttcgtctacccattc 54365977  T
Q  219 atacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcat 318  Q
    ||||||| ||||| |  ||| |      || | | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  54365976 atacaaacaggtatgctgtcaaa-----accacttggggtaagcttcacatcattcataatcaacataaacaaacataagcattcaaggatttcatgcat 54365882  T
Q  319 aacacatatatatactcatccctccta 345  Q
    |||||||||| |||| || ||||||||    
T  54365881 aacacatatacatacccacccctccta 54365855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 58 - 345
Target Start/End: Complemental strand, 15216313 - 15216014
Alignment:
Q  58 aaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctac-tctaagactcaacga---- 152  Q
    |||||||| | |||||||| || || |||||||  ||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| | ||        
T  15216313 aaagtctccacaacataaataagtccagaataaaaaatctagaataatcataaagacagacatcctagatcagagcctacatctaagactccaagaagag 15216214  T
Q  153 -taacggagatagctcccgctatccaagcaa-tcaacaaaa-----ctaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccaca 245  Q
     ||||| |||||||||||||||||||||||| ||| | |||     |||| | |||||||| || ||||  ||||||||| |||||||  ||||| ||||    
T  15216213 ataacgaagatagctcccgctatccaagcaactcaccgaaaacaaactaatcatgcacgccgtcaaccctatcatacaaacaggtaggcagtccatcaca 15216114  T
Q  246 ga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctcct 344  Q
    || | | | || ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||| ||||||||||||| |||  ||||||||||    
T  15216113 gatccactaggtgtaagcttcacatcaatcataatcaacgtaaacaa-cataagcattcaaggatttcatacataacacatatacataaacatccctcct 15216015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 29 - 288
Target Start/End: Original strand, 24236980 - 24237233
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    ||||| ||||||||  |||||| ||||| ||| |||| | |||||||| ||  | |||||||||||||||||||||||||||||||| ||||||||||||    
T  24236980 ataaagtctccaaatcccgacaaatggataaaatctccacaacataaataaacccagaataatcaatctagaataatcatacagacagacatcctagatc 24237079  T
Q  129 agagcctactctaagactc-------aacgataacggagatagctcccgctatccaagcaatcaacaaaactaaacctgcacgccatctacccattcata 221  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||        ||||||   ||||||  | ||||| ||||||||    
T  24237080 agagcctactctaagactcagcagaaaacgataacggagatagctcccgctatccaagc--------aaactacttctgcaccacgtctactcattcata 24237171  T
Q  222 caaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaa 288  Q
    |||| ||||||| ||||      | || | ||||||| |||||||||||||||||||||||||||||    
T  24237172 caaacaggtaggcggtc-----aaaacaactgggggttagcttcacatcaatcataatcaacataaa 24237233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 290
Target Start/End: Complemental strand, 19624132 - 19623872
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    ||||||||||||||  |||||||||||  ||| |||| ||||||||||    || || ||||||||||||||||||||||| ||||| ||||||||||||    
T  19624132 ataaaatctccaaatcccgacatatggtaaaa-tctccataacataaa----tccagcataatcaatctagaataatcataaagacagacatcctagatc 19624038  T
Q  129 agagcctactctaagactc-----aacgataacggagatagctcccgctatccaagcaatc----aacaaaactaaacctgcacgccatctacccattca 219  Q
    | |||||||||||||||||     | |||||||| ||||||||||| ||||||||| | ||    | ||||||||  || |||| |||||||||||||||    
T  19624037 aaagcctactctaagactcgaaagaccgataacgaagatagctccctctatccaagtactcaccaagcaaaactactccggcactccatctacccattca 19623938  T
Q  220 tacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    |||||| ||||||||||||      | || | | ||||| |||||||||| ||||||||||||||||||||    
T  19623937 tacaaacaggtaggtggtc-----aaaaccactaggggttagcttcacataaatcataatcaacataaaca 19623872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 214 - 342
Target Start/End: Original strand, 9650114 - 9650243
Alignment:
Q  214 cattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatc-aacataaacaaacataaacattcaaggatttc 312  Q
    |||||||||||||| ||||| |||||||||||||| | ||||||| ||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  9650114 cattcatacaaatatgtaggcggtccaccacagaccattgggggttagcttgacatcaatcataatcaaacataaacaatcataaacactcaaggatttc 9650213  T
Q  313 atgcataacacatatatatactcatccctc 342  Q
    |||||| |||| |||| |||  ||||||||    
T  9650214 atgcatgacacgtatacataaccatccctc 9650243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 41919310 - 41919188
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagat 162  Q
    |||||||| || || ||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||      ||| |||||||||||    
T  41919310 aacataaataaatccagaataaacaatctagaataatcataaagacatacatcttagatcagagcctaccctaagactcaaaggaaacaataacggagat 41919211  T
Q  163 agctcccgctatccaagcaatca 185  Q
    |||||||||||||||||||||||    
T  41919210 agctcccgctatccaagcaatca 41919188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 290
Target Start/End: Complemental strand, 47470394 - 47470166
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagat 162  Q
    |||||||| || || ||| ||| |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||      |||||||||||||||    
T  47470394 aacataaataaatccagagtaaacaatctagaataatcata-agacagacatcctagatcagagcctaccctaagactctaaggaaacgataacggagat 47470296  T
Q  163 agctcccgctatccaagcaa-tcaacaa----aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtggggg 257  Q
    |||| ||| ||||||||||| ||| |||    |||||| | |||||  | ||||||||| |||||| | | |||||||||| |  |   ||||| |||||    
T  47470295 agcttccgatatccaagcaactcaccaaaagcaactaatcatgcacttcgtctacccatccatacagacaagtaggtggtcaa--aaccactag-ggggg 47470199  T
Q  258 taagcttcacatcaatcataatcaacataaaca 290  Q
    ||||||| ||||||||||||||| |||||||||    
T  47470198 taagctttacatcaatcataatccacataaaca 47470166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 183
Target Start/End: Complemental strand, 50224266 - 50224098
Alignment:
Q  21 acatcatcataaaa--tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaac 118  Q
    |||||| |||||||  ||||||||  |||||| ||||||||| |||| | |||||||| || |  ||||||| |||||||||||||||||| ||||||||    
T  50224266 acatcaacataaaaattctccaaatcccgacaaatggacaaa-tctccacaacataaataaattcagaataaacaatctagaataatcata-agacaaac 50224169  T
Q  119 atcctagatcagagcctactctaagact------caacgataacggagatagctcccgctatccaagcaat 183  Q
    ||||||||||||| ||||| ||| ||||       ||||||||||||||||||||||| ||||||||||||    
T  50224168 atcctagatcagaccctaccctacgactataaggaaacgataacggagatagctcccgatatccaagcaat 50224098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 12136157 - 12136095
Alignment:
Q  256 ggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcat 318  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  12136157 ggtaaccttcacatcaatcataatcaacataaacaaacataagcattctaggatttcatgcat 12136095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 41919108 - 41919030
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatata 332  Q
    ||||||||||| |||||||||| |||||||||||||||||| || ||||||||||| |||||||| ||| |||||||||    
T  41919108 ggggtaagctttacatcaatcaaaatcaacataaacaaacacaagcattcaaggatatcatgcatgacatatatatata 41919030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 10239485 - 10239381
Alignment:
Q  86 aataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaag 179  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||      |||||||||||||||| ||||| ||||| |||    
T  10239485 aataaacaatctagaataatcata-agacatacatcctagatcagagcctatcctaagactctaaggaaacgataacggagataactccctctatctaag 10239387  T
Q  180 caatca 185  Q
    ||||||    
T  10239386 caatca 10239381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 17378238 - 17378180
Alignment:
Q  87 ataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagac 145  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  17378238 ataatcaatctagaataatcataaagacagacatcctagatcaaagcctactctaagac 17378180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 15116162 - 15116071
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||  | |||||||||||||||||||| |||||| |||| ||||||||||  |||||||||||||||| | ||| ||||||||||||    
T  15116162 tgggggtaagtattacatcaatcataatcaacat-aacaaatataagcattcaagga-atcatgcataacacataaacataatcatccctccta 15116071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 12136318 - 12136240
Alignment:
Q  111 agacaaacatcctagatcagagcctactctaagactcaa-----cgataacggagatagctcccgctatccaagcaatca 185  Q
    |||| ||||||||| ||||||||||| |||||||||| |     ||||||||||||||||| ||||||||||||||||||    
T  12136318 agaccaacatccta-atcagagcctaatctaagactccaagatacgataacggagatagcttccgctatccaagcaatca 12136240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 13596006 - 13595969
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||||||||||||||| |||||||||||||||    
T  13596006 aacgataacggagatagctcccactatccaagcaatca 13595969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 7187908 - 7187872
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||||||||||| ||||||||||||||||||    
T  7187908 acgataacggagatagctgccgctatccaagcaatca 7187872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 19076201 - 19076241
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacaca 324  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  19076201 ataatcaaacataagcattcaaggatttcatgcataacaca 19076241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 19855559 - 19855507
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| ||||||||| ||||||| ||||||| |||||||||||||| |||||||    
T  19855559 ataatcaaacataagcattcaaagatttcaagcataacacatatacatactca 19855507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 12452715 - 12452676
Alignment:
Q  289 caaacataaacattcaaggatttcatgcataacacatata 328  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  12452715 caaacataagaattcaaggatttcatgcataacacatata 12452676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 41258327 - 41258294
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    |||||| |||||||||||||||||||||||||||    
T  41258327 acgatagcggagatagctcccgctatccaagcaa 41258294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 41258213 - 41258177
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  41258213 ggggtaagctttacatcaatcataatccacataaaca 41258177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 50224027 - 50223991
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  50224027 ggggtaagctttacatcaatcataatccacataaaca 50223991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 175 - 333
Target Start/End: Original strand, 5564 - 5722
Alignment:
Q  175 ccaagcaatcaacaaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatc 274  Q
    |||||||| |||  ||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| | || | ||||||| | |||||||||||||    
T  5564 ccaagcaagcaaacaaactaatcatgcacgccgtctacccattcatacaaataggtaggcggtccaccatacaccactgggggttaacttcacatcaatc 5663  T
Q  275 ataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatac 333  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  5664 ataatcaacataaacaaacataagcattcaaggatttcattcataacacatatacatac 5722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 175 - 345
Target Start/End: Complemental strand, 15286 - 15116
Alignment:
Q  175 ccaagcaatcaacaaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatc 274  Q
    |||||||  |||||||||||| | ||||| |  ||| |||||||||| ||||||||||| |||||| ||||||| | ||||||| |||||||||| ||||    
T  15286 ccaagcatgcaacaaaactaatcatgcacactgtcttcccattcatataaataggtaggcggtccatcacagaccactgggggttagcttcacataaatc 15187  T
Q  275 ataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||| |||||||||||    
T  15186 ataatcaacataaacaaacataagcattcaaggatttcatgcataacatatatacatacccatccctccta 15116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 15787 - 15705
Alignment:
Q  197 cctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaac 283  Q
    |||||||||| |||||||||||||||||| |||||||||||| |    |||| | ||||||| ||||||||||||||||||||||||    
T  15787 cctgcacgccgtctacccattcatacaaacaggtaggtggtcaa----agaccattgggggttagcttcacatcaatcataatcaac 15705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 94; Significance: 8e-46; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 29 - 345
Target Start/End: Complemental strand, 256890 - 256570
Alignment:
Q  29 ataaaatctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatc 128  Q
    ||||||||| ||||  || | |||||| |||| |||| ||||||||||    || || ||||||||||||||||||||||| ||||| ||||||||||||    
T  256890 ataaaatcttcaaatcccaatatatgggcaaaatctccataacataaa----tccagcataatcaatctagaataatcataaagacagacatcctagatc 256795  T
Q  129 agagcctactctaagact-caa----cgataacggagatagctcccgctatccaagcaatcaacaa---------aactaaacctgcacgccatctaccc 214  Q
    |||||||||||||||||  |||    |||||||||||||| |||||| |||||||||| |||  ||         |||||  | |||||||| |||||||    
T  256794 agagcctactctaagacaacaaagaccgataacggagataactcccgttatccaagcactcacgaagcaatcaacaactactcatgcacgccgtctaccc 256695  T
Q  215 attcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcat 314  Q
    ||| || |||| ||||||| |||| |      || | | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  256694 attaatccaaacaggtaggcggtcaa------accactaggggtaagcttcacatcaatcataatcaacataaacaaacataagcattcaaggatttcat 256601  T
Q  315 gcataacacatatatatactcatccctccta 345  Q
     ||||||||||||| |||  |||||||||||    
T  256600 acataacacatatacataaccatccctccta 256570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 98960 - 98890
Alignment:
Q  126 atcagagcctactctaagactc----aacgataacggagat-agctcccgctatccaagcaatcaacaaaa 191  Q
    ||||||||||| ||||||||||    ||||||||||||||| |||||| |||||||||||| ||| |||||    
T  98960 atcagagcctaatctaagactccaagaacgataacggagattagctcctgctatccaagcactcaccaaaa 98890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 126 - 327
Target Start/End: Original strand, 10438 - 10650
Alignment:
Q  126 atcagagcctactctaagactc-----aacgataacggagat-agctcccgctatccaagcaatcaacaaaa-----ctaaacctgcacgccatctaccc 214  Q
    ||||||||||| ||||||||||     ||||||||| ||||| ||||||||||||||||||| ||| |||||     |||  ||||||| || |||||||    
T  10438 atcagagcctaatctaagactccaagaaacgataacagagattagctcccgctatccaagcactcaccaaaagcatactactcctgcactccgtctaccc 10537  T
Q  215 attcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttca 313  Q
    ||||||||||| ||||||| ||| || |||||| | | |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  10538 attcatacaaacaggtaggcggttcatcacagatccactgggggtaagtttcacatcaatcataatcaacataaacaaacataggcattcaagga-ttca 10636  T
Q  314 tgcataacacatat 327  Q
    ||||||||||||||    
T  10637 tgcataacacatat 10650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1923 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold1923
Description:

Target: scaffold1923; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 204 - 327
Target Start/End: Original strand, 642 - 766
Alignment:
Q  204 gccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatc-aacataaacaaacataaacatt 302  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | || |||| | ||||||||||||||||||| || |||||||| ||||||||||    
T  642 gccatctacccattcatacaaataggtaggcggtccaccacagaccactgagggttatcttcacatcaatcataatcaaatataaacaaccataaacatt 741  T
Q  303 caaggatttcatgcataacacatat 327  Q
    |||||||||||||||| ||||||||    
T  742 caaggatttcatgcatgacacatat 766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 13251 - 13161
Alignment:
Q  255 gggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| |||||||    
T  13251 gggtaagcttcacatcaatcataatcaacataaacaaacataagcattcaaggatttcatgcataacacatatacatacccatgcctccta 13161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 8602 - 8709
Alignment:
Q  175 ccaagcaatcaacaaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatc 274  Q
    |||||||| |||||||||||| |||||||||| | ||| |||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||||||    
T  8602 ccaagcaagcaacaaaactaatcctgcacgccgtttacacattcatacaaataggtaggcggtccaccacagaccattgggggttagcttcacatcaatc 8701  T
Q  275 ataatcaa 282  Q
    ||||||||    
T  8702 ataatcaa 8709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 33383989 - 33384151
Alignment:
Q  25 catcataaaa--tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaacatcc 122  Q
    ||||||||||  |||||||| ||||||| |||| |||| ||||   |||||||| || || ||||||| |||||||||||||||||| ||||| ||||||    
T  33383989 catcataaaaattctccaaattccgacaaatgggcaaa-tctccgaaacataaataaatccagaataaacaatctagaataatcataaagacagacatcc 33384087  T
Q  123 tagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagc 180  Q
    ||||||||||||||| |||||||||      |||||||||||||||||||||||||||||||||    
T  33384088 tagatcagagcctaccctaagactctaaggaaacgataacggagatagctcccgctatccaagc 33384151  T

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Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 33395172 - 33395265
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||  |||||||||||    
T  33395172 tgggggtaagctttacatcaatcataatcaacataaacaaacataagcattcaaagatttcatgcataacacatgtatataaccatccctccta 33395265  T

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Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 182
Target Start/End: Complemental strand, 41213769 - 41213602
Alignment:
Q  21 acatcatcataaaa--tctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaac 118  Q
    ||||||||||||||  ||||||||  |||||| |||| |||| |||| |||||||||| || || ||||||| ||||||||||||||| || ||||| ||    
T  41213769 acatcatcataaaaattctccaaatcccgacaaatgggcaaa-tctccataacataaataaatccagaataaacaatctagaataatcgta-agacagac 41213672  T
Q  119 atcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||| |||||||||      |||||||||||||||||||| ||||||||||||||    
T  41213671 atcctagatcagagcctaccctaagactcaaagtaaacgataacggagatagctctcgctatccaagcaa 41213602  T

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Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 345
Target Start/End: Complemental strand, 78364 - 78285
Alignment:
Q  266 acatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||  |||||||||||    
T  78364 acatcaatcataatcaacataaacaaacataagcattcaaggatttcatgcataacatatatacataaccatccctccta 78285  T

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Target: chr1; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 126 - 345
Target Start/End: Original strand, 20191904 - 20192128
Alignment:
Q  126 atcagagcctactctaagactc-----aacgataacggagat-agctcccgctatccaagcaatcaacaaaactaaac-----ctgcacgccatctaccc 214  Q
    ||||||||||| ||||||||||     |||||||| |||||| ||||||||||||||||||| |||  ||||  ||||     || ||| || |||||||    
T  20191904 atcagagcctaatctaagactccaataaacgataatggagattagctcccgctatccaagcactcacaaaaagcaaactactcctacactccgtctaccc 20192003  T
Q  215 attcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcat 314  Q
    ||||||||||| ||||||| |||| |      || | ||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| || |||||    
T  20192004 attcatacaaacaggtaggcggtcgaa-----accactgggggtaagcttcacatcaatcatgatcaacataaacaaatataagcattcaaaga-ttcat 20192097  T
Q  315 gcataacacatatatatactcatccctccta 345  Q
    |||||||||||||| |||  ||| |||||||    
T  20192098 gcataacacatatacataaccattcctccta 20192128  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 238
Target Start/End: Complemental strand, 5770257 - 5770079
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagat 162  Q
    |||||||| || || || |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||      || ||||||||||||    
T  5770257 aacataaataaatccaggataaacaatctagaataatcata-agacaaacatcctagatcagagcctatcctaagactctaaggaaatgataacggagat 5770159  T
Q  163 agctcccgctatccaagcaa-tcaacaa---aactaaacctgcacgccatctacccattcatacaaataggtaggtggtc 238  Q
    |||||  ||||||||||||| ||| |||   |||||| |||||||  | ||||||||| |||||| | ||||||||||||    
T  5770158 agctcttgctatccaagcaactcaccaaagcaactaatcctgcacttcgtctacccatccatacagacaggtaggtggtc 5770079  T

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Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 191
Target Start/End: Original strand, 21041919 - 21042031
Alignment:
Q  84 agaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatcca 177  Q
    ||||||| | |||||||||||||||| ||||| |||||||||||| |||||||| |||||||||      ||||||||||||||||| ||||||||||||    
T  21041919 agaataaacgatctagaataatcata-agacagacatcctagatccgagcctaccctaagactctaaggaaacgataacggagatagttcccgctatcca 21042017  T
Q  178 agcaatcaacaaaa 191  Q
    |||||||| |||||    
T  21042018 agcaatcaccaaaa 21042031  T

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Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 20820561 - 20820660
Alignment:
Q  93 aatctagaataatcatacagacaaacatcctagatcagagcctactctaagactcaa-------cgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||  |||||||||||       ||||||||||||||||||||||||||||||||||||    
T  20820561 aatctagaataatcataaagatagacatcctagatcagagcctatcctaagactcaaaagaaaacgataacggagatagctcccgctatccaagcaatca 20820660  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 40555439 - 40555614
Alignment:
Q  21 acatcatcataaaat-ctccaaaatccgacatatggacaaagtctcaataacataaacaattctagaataatcaatctagaataatcatacagacaaaca 119  Q
    ||||||||||||||| || ||||  |||||| |||| |||| |||| | |||||||| || || | ||||| |||||||||||||||||| ||||| |||    
T  40555439 acatcatcataaaattcttcaaatcccgacaaatgggcaaa-tctccacaacataaataaatccaaaataaacaatctagaataatcata-agacagaca 40555536  T
Q  120 tcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatcaacaaaa 191  Q
    |||||||||||||||||| || ||||||      |||||||||| |||||| ||||| ||||| |||||||| |||||    
T  40555537 tcctagatcagagcctaccctgagactctaaggaaacgataacgaagatagttcccgatatccgagcaatcaccaaaa 40555614  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 20820768 - 20820822
Alignment:
Q  291 aacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  20820768 aacataaacattcaaggatttcatgcataacacatatacatacccatccctccta 20820822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 40438304 - 40438230
Alignment:
Q  117 acatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||||||||| |||||||||      ||||||||||||||||||||||||||||||| ||||||    
T  40438304 acatcctagatcagagcctaccctaagactctaagaaaacgataacggagatagctcccgctatccaaacaatca 40438230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 15807080 - 15807025
Alignment:
Q  283 cataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatc 338  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  15807080 cataatcaaacataagcattcaaggatttcatgcataacacatatacatattcatc 15807025  T

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Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 291
Target Start/End: Original strand, 25093045 - 25093186
Alignment:
Q  151 gataacggagat-agctcccgctatccaagcaatcaacaaaactaaac-----ctgcacgccatctacccattcatacaaataggtaggtggtccaccac 244  Q
    |||||||||||| ||||||||||||||||||| ||| |||||  ||||     |||||| || |||| ||||||||||||| |||| || |||| |        
T  25093045 gataacggagattagctcccgctatccaagcactcaccaaaagcaaactactcctgcactccgtctatccattcatacaaacaggttggcggtcaaa--- 25093141  T
Q  245 agactagtgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
      || | | ||||||||||||||||||||||||||||||||||||||    
T  25093142 --accactaggggtaagcttcacatcaatcataatcaacataaacaa 25093186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 40438377 - 40438319
Alignment:
Q  84 agaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaag 143  Q
    ||||||| |||||||||||||||||| | ||| ||||||||||||||||||||| |||||    
T  40438377 agaataaacaatctagaataatcata-atacagacatcctagatcagagcctaccctaag 40438319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 282
Target Start/End: Original strand, 46143973 - 46144101
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa-tcaacaa---aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccac 244  Q
    |||||||||||||||||||||||||||||||||| ||| |||   |||||| |||||||  | ||||||||| |||||    ||||||| ||||          
T  46143973 acgataacggagatagctcccgctatccaagcaactcaccaaagcaactaaccctgcacctcgtctacccatccatac----aggtaggcggtc-----a 46144063  T
Q  245 agactagtgggggtaagcttcacatcaatcataatcaa 282  Q
    | || | |||||||||||||||||||||||||||||||    
T  46144064 aaaccactgggggtaagcttcacatcaatcataatcaa 46144101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 5472257 - 5472220
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  5472257 ggggtaagctttacatcaatcataatccacataaacaa 5472220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 291
Target Start/End: Original strand, 40555676 - 40555713
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  40555676 ggggtaagctttacatcaatcataatccacataaacaa 40555713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 52397854 - 52397887
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    |||||||| |||||||||||||||||||||||||    
T  52397854 acgataacagagatagctcccgctatccaagcaa 52397887  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 20252265 - 20252337
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaag 261  Q
    ||||||||||||||  | ||||||||| |||||| ||||| ||| |||||| |||||| ||| ||||||||||    
T  20252265 aactaaacctgcacaacgtctacccatccatacagataggcaggcggtccatcacagatctactgggggtaag 20252337  T

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Target: scaffold0090 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 328
Target Start/End: Complemental strand, 37106 - 36981
Alignment:
Q  197 cctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaacataaacaaacata 296  Q
    ||||||| || |||||||||||||||||||||| ||| |||| |      |||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  37106 cctgcactccgtctacccattcatacaaataggcaggcggtcaaa-----actactgggggtaagcttcacatcaatcataatcaacataaacaaa-ata 37013  T
Q  297 aacattcaaggatttcatgcataacacatata 328  Q
    | ||||||||||| ||||||||||||||||||    
T  37012 agcattcaaggatctcatgcataacacatata 36981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 345
Target Start/End: Complemental strand, 7064 - 6906
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga-ctagtgggggtaagcttcacatcaatcataatca---acat 285  Q
    |||||| |||||||  | ||||||||| |||||| | ||||||| |||||| ||| || | | ||| ||||||||| ||||||||||||||||   | ||    
T  7064 aactaatcctgcacaacgtctacccatccatacagacaggtaggcggtccatcactgatccactggtggtaagctttacatcaatcataatcaatgaaat 6965  T
Q  286 aaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||  |||||||||| ||||||||||  | ||||| |||  |||||||||||    
T  6964 aaacaaacataggcattcaagga-ttcatgcatagtatatatacataaccatccctccta 6906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 19631 - 19719
Alignment:
Q  258 taagcttcacatcaatcataatcaacataaacaaacataaaca-ttcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||  |||||||||||    
T  19631 taagcttcacatcaatcataatcaacataaacaaacataaacatttcaaggatttcatgcataacatatatacataaccatccctccta 19719  T

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Target: scaffold0174 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 22443 - 22349
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaacaaacata---aacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||||||| ||||||||||||||||||||   | |||||||||||||||||||| |||||||||||||  |||||||||||    
T  22443 ggggtaagcttcacatcaatcacaatcaacataaacaaacataagcagcattcaaggatttcatgcatgacacatatatataaccatccctccta 22349  T

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Target: scaffold0174; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 182
Target Start/End: Original strand, 772 - 803
Alignment:
Q  151 gataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||||||||||||||    
T  772 gataacggagatagctcccgctatccaagcaa 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 198 - 328
Target Start/End: Original strand, 3595 - 3724
Alignment:
Q  198 ctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaa-cataaacaaacata 296  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||||| || | | ||||| ||||||||||| ||||||||||| |||| |||||||||    
T  3595 ctgcacgccgtctacccattcatacaaatagttaggcggtccaccacataccactaggggttagcttcacatc-atcataatcaagcatagacaaacata 3693  T
Q  297 aacattcaaggatttcatgcataacacatata 328  Q
    | |||||||||| ||| | |||||||||||||    
T  3694 agcattcaagga-ttcctacataacacatata 3724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 93 - 345
Target Start/End: Complemental strand, 122005 - 121748
Alignment:
Q  93 aatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc-------aacgataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||||||||||  |||| ||||||||||||||| ||||||||||||||        |||||||||  ||| ||||||||||||||||||| | |    
T  122005 aatctagaataatcataaggacagacatcctagatcagatcctactctaagacttgaaagaaaacgataacaaagaaagctcccgctatccaagcactaa 121906  T
Q  186 acaa---aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatc-a 281  Q
     |||   |||||  ||||||| || |||||||||||||||||| ||||||| |||| |   ||  || |    ||| ||||||||||||||||||||| |    
T  121905 ccaagcaaactattcctgcactccttctacccattcatacaaacaggtaggcggtcaaaacca--cttg----ggttagcttcacatcaatcataatcaa 121812  T
Q  282 acataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    | |||||||| ||||| |||||||| ||||||| |||| |||||||| |||| | |||||||||    
T  121811 atataaacaatcataagcattcaagaatttcatacatagcacatatacatacccgtccctccta 121748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 106593 - 106560
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    |||||| |||||||||||||||||||||||||||    
T  106593 acgatagcggagatagctcccgctatccaagcaa 106560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 3304 - 3224
Alignment:
Q  265 cacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||| |||  |||||||||||    
T  3304 cacatcaatcataatcaaaataaacaaacataagcattcaaggatttcatgcataacaaatatacataaccatccctccta 3224  T

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Target: scaffold0331 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 266 - 332
Target Start/End: Original strand, 11641 - 11706
Alignment:
Q  266 acatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatata 332  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  11641 acatcaatcataatcaacataaacaaacat-aacattcaaggatttcatgcataacatatatatata 11706  T

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Target: scaffold0216 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 23003 - 22911
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacattcaaggatttcatgcataacacatatatatactcatccctccta 345  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||| |||||||| |||  |||| ||||||    
T  23003 tgggggtaagctttacatcaatcataatcaacataaacaaacatatgcattcaagga-ttcatgcatagcacatatacataaccatctctccta 22911  T

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Target: scaffold0216; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 23100 - 23059
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaatcaacaa 189  Q
    |||||||| ||||||||||||||||||||||||||||| |||    
T  23100 aacgataatggagatagctcccgctatccaagcaatcaccaa 23059  T

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Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 25680 - 25786
Alignment:
Q  84 agaataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatcca 177  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||  |||||||||      | ||||||||||||||||||||||||||||    
T  25680 agaataaacaatctaaaataatcata-agacaaacatcctagatcagagcctatcctaagactctaaggaagcgataacggagatagctcccgctatcca 25778  T
Q  178 agcaatca 185  Q
    || |||||    
T  25779 aggaatca 25786  T

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Target: scaffold0004; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 84553 - 84650
Alignment:
Q  86 aataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaag 179  Q
    ||||| ||||||||||||||||||     | ||||||||||||||||| || ||||||||||      ||||||||||||||||||||||||||||||||    
T  84553 aataaacaatctagaataatcata-----agacatcctagatcagagcttattctaagactctaaggaaacgataacggagatagctcccgctatccaag 84647  T

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Target: scaffold0258 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 281
Target Start/End: Original strand, 8386 - 8596
Alignment:
Q  89 aatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc-----aacgataacggagatagctcccgctat--------- 174  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||     | |||   ||||||||||||| |||||             
T  8386 aatcaatctagaataaacataaagacatacatcctagatcagagcctactctaagactccaaagaccgaccgcggagatagctcctgctatccacaagca 8485  T
Q  175 ----ccaagcaatcaacaaaactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatc 270  Q
        |||||||| | | ||||| || ||| |||||| ||||||||||| |||||||||||||  ||||||||||| ||   ||||||| ||||| |||||    
T  8486 ctcaccaagcaagctataaaaccaatccttcacgccgtctacccattcgtacaaataggtagtcggtccaccacaaacccctgggggttagcttgacatc 8585  T
Q  271 aatcataatca 281  Q
    |||||||||||    
T  8586 aatcataatca 8596  T

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Target: scaffold0442 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 2012 - 1851
Alignment:
Q  86 aataatcaatctagaataatcatacagacaaacatcctagatcagagcctactctaagactc------aacgataacggagatagctcccgctatccaag 179  Q
    ||||| |||||||||||||||||| ||||| ||||||||||| |||||||   |||||||||      ||||||||||||||||||||||||||||||||    
T  2012 aataaacaatctagaataatcata-agacagacatcctagattagagcctgtcctaagactctaaggaaacgataacggagatagctcccgctatccaag 1914  T
Q  180 caa-tcaacaa---aactaaacctgcacgccatctacccattcatacaaataggtaggtggtc 238  Q
    ||| ||| |||   |||||| |||||||  | |||||| || |||||| ||||||||| ||||    
T  1913 caactcaccaaagcaactaatcctgcacttcgtctacctatccatacagataggtaggcggtc 1851  T

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Target: scaffold0028 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 40374 - 40299
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacattcaaggatttcatgcataacacatata 328  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||| |||||||||    
T  40374 ggggttagcttcacatcaatcataatcaaacataaacaatcataaacattataggatttcatgcatgacacatata 40299  T

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Target: scaffold0035 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 64415 - 64277
Alignment:
Q  197 cctgcacgccatctacccattcatacaaataggtaggtggtccaccaca-gactagtgggggtaagcttcacatcaatcataatcaa-cataaacaaaca 294  Q
    |||||||||  |||||||||||||||||||||||||| |||| |||| | ||| | || || || |||||||| || |||||||||| ||||||||| |     
T  64415 cctgcacgctgtctacccattcatacaaataggtaggcggtcaaccaaacgaccactgcggtta-gcttcacaaca-tcataatcaagcataaacaagct 64318  T
Q  295 taaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||||||||||||| |||||||| |||||||||| |||||||    
T  64317 taaacattcaagga-ttcatgcacaacacatatacatactca 64277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 101 - 284
Target Start/End: Original strand, 11959 - 12156
Alignment:
Q  101 ataatcatacagacaaacatcctagatcagagcctactctaagactc-------aacgataacggagatagctcccgctatccaagcaatcaacaa---- 189  Q
    ||||||||| | || ||||||||| ||||||||||| ||||||||||       ||||| |||||||||||||||||||||||||||| ||| |||        
T  11959 ataatcataaaaaccaacatccta-atcagagcctaatctaagactccaaaggaaacgacaacggagatagctcccgctatccaagcactcaccaagcaa 12057  T
Q  190 -----aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacagactagtgggggtaagcttcacatcaatcataatcaaca 284  Q
         |||||  |||||||||| ||||  |||||||||||||||||| | |||| ||||||  | | | ||||| |||||||||||||| ||||||||||    
T  12058 tcaacaactactcctgcacgccgtctaaacattcatacaaataggtatgcggtcaaccacaagccaat-ggggttagcttcacatcaattataatcaaca 12156  T

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Target: scaffold0299 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 10422 - 10370
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  10422 ataatcaaacataagcattcaaggatttcatgcataacacatatacatactca 10370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 3725 - 3650
Alignment:
Q  116 aacatcctagatcagagcctactctaagactcaacg------ataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||||||||||||||  ||| ||||| |||      ||||||||||||||||||||||||||||||||||    
T  3725 aacatcctagatcagagcctatcctacgactctacggaaccgataacggagatagctcccgctatccaagcaatca 3650  T

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Target: scaffold0387 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 3003 - 2910
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa-tcaacaa---aactaaacctgcacgccatctacccattcatacaaataggtaggtggtc 238  Q
    |||||||||||||||||||||||||||||||||| ||| |||   |||||| |||||||  ||||||||||| ||| || | ||||||| ||||    
T  3003 acgataacggagatagctcccgctatccaagcaactcatcaaagcaactaaccctgcacttcatctacccatccatccatacaggtaggcggtc 2910  T

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Target: scaffold0148 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 36093 - 36128
Alignment:
Q  150 cgataacggagatagctcccgctatccaagcaatca 185  Q
    ||||||||||||||||||||||||||||||||||||    
T  36093 cgataacggagatagctcccgctatccaagcaatca 36128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 6868 - 6835
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||||||||||||||||    
T  6868 acgataacggagatagctcccgctatccaagcaa 6835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 25947 - 25914
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||||||||||||||||    
T  25947 acgataacggagatagctcccgctatccaagcaa 25914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 21150 - 21098
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| ||||||||| |||||||||||||||||||  ||||||||| |||||||    
T  21150 ataatcaaacataagcattcaaggatttcatgcaagacacatatacatactca 21098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 45464 - 45432
Alignment:
Q  256 ggtaagcttcacatcaatcataatcaacataaa 288  Q
    |||||||||||||||||||||||||||||||||    
T  45464 ggtaagcttcacatcaatcataatcaacataaa 45432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 55745 - 55781
Alignment:
Q  254 ggggtaagcttcacatcaatcataatcaacataaaca 290  Q
    ||||||||||||||||||||||||||| |||||||||    
T  55745 ggggtaagcttcacatcaatcataatccacataaaca 55781  T

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Target: scaffold0205 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 4764 - 4803
Alignment:
Q  252 tgggggtaagcttcacatcaatcataatcaacataaacaa 291  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  4764 tgggggttaacttcacatcaatcataatcaacataaacaa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 4619 - 4681
Alignment:
Q  117 acatcctagatcagagcctactctaagactc---aacga-taacggagatagctcccgctatcc 176  Q
    |||||||| ||||||||||| ||||||||||   ||||| ||||||||||||||||||||||||    
T  4619 acatccta-atcagagcctaatctaagactccaaaacgaataacggagatagctcccgctatcc 4681  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 16744 - 16689
Alignment:
Q  69 aacataaacaattctagaataatcaatctagaataatcatacagacaaacatccta 124  Q
    |||||||| || || |||||||||||||||| ||||||||| ||||| ||||||||    
T  16744 aacataaataaatccagaataatcaatctagtataatcataaagacagacatccta 16689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 141256 - 141221
Alignment:
Q  150 cgataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||||||||||||| |||||||||||||||    
T  141256 cgataacggagatagctccccctatccaagcaatca 141221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0613 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0613
Description:

Target: scaffold0613; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 3004 - 2958
Alignment:
Q  197 cctgcacgccatctacccattcatacaaataggtaggtggtccacca 243  Q
    |||||| ||| |||||||||||||||||||||||||| |||| ||||    
T  3004 cctgcatgccgtctacccattcatacaaataggtaggcggtcaacca 2958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 5923 - 5953
Alignment:
Q  149 acgataacggagatagctcccgctatccaag 179  Q
    |||||||||||||||||||||||||||||||    
T  5923 acgataacggagatagctcccgctatccaag 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 7268 - 7305
Alignment:
Q  148 aacgataacggagatagctcccgctatccaagcaatca 185  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  7268 aacgataacgaagataactcccgctatccaagcaatca 7305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 10199 - 10142
Alignment:
Q  190 aactaaacctgcacgccatctacccattcatacaaataggtaggtggtccaccacaga 247  Q
    |||||| |||||||  | ||||||||| |||||||||||||||| |||||| ||||||    
T  10199 aactaatcctgcacaacgtctacccatccatacaaataggtaggcggtccatcacaga 10142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 18824 - 18857
Alignment:
Q  149 acgataacggagatagctcccgctatccaagcaa 182  Q
    ||||||||||||||||||||| ||||||||||||    
T  18824 acgataacggagatagctcccactatccaagcaa 18857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 4346 - 4295
Alignment:
Q  284 ataaacaaacataaacattcaaggatttcatgcataacacatatatatactca 336  Q
    |||| ||||||||| |||||||||| |||||||||| |||||||| |||||||    
T  4346 ataatcaaacataagcattcaagga-ttcatgcatagcacatatagatactca 4295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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