View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0647_low_20 (Length: 323)
Name: NF0647_low_20
Description: NF0647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0647_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 37432163 - 37431870
Alignment:
| Q |
1 |
agaattgatcaaagaagatagattgaagaaccttgagtgctttgaggaaagtaaaaccaggtgcattgatggggatagagtacatgcctttagacaaatc |
100 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37432163 |
agaattgatcaaagaagatagagtgaagaaccttgagtgctttgtggaaagtaaaaccaggtgcattgatggggatagagtacatgcctttagacaaatc |
37432064 |
T |
|
| Q |
101 |
agtaaatgaacttccaatgtttttaacaatgttctgattagaggttcccatgaaaacatggataatggatttaaaggaaaccttcttcatctctttcaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37432063 |
agtaaatgaacttccaatgtttttaacaatgttctgattagaagttcccatgaaaacatggataatggatttaaaggaaaccttcttcatctctttcaag |
37431964 |
T |
|
| Q |
201 |
agctcgatggggtgcttcatgctagacaattcttctaacgaattgattgcaatgtcctcgagacgttctaggtacatgtctaacaccttgtgac |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37431963 |
agctcgatggggtgcttcatgctagacaattcttctaacgaattgattgcaatgtcctcgagacgttctaggtacatgtctaacaccttgtgac |
37431870 |
T |
|
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