View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0647_low_33 (Length: 286)

Name: NF0647_low_33
Description: NF0647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0647_low_33
NF0647_low_33
[»] scaffold0053 (1 HSPs)
scaffold0053 (54-265)||(2259-2470)
[»] chr5 (38 HSPs)
chr5 (56-265)||(22448330-22448539)
chr5 (54-195)||(33955498-33955639)
chr5 (54-198)||(20036044-20036188)
chr5 (54-193)||(13815371-13815510)
chr5 (54-196)||(11223423-11223564)
chr5 (132-264)||(22457723-22457856)
chr5 (54-202)||(42732575-42732723)
chr5 (60-195)||(20834479-20834614)
chr5 (63-195)||(24244050-24244182)
chr5 (63-195)||(24290674-24290806)
chr5 (54-202)||(26652660-26652808)
chr5 (54-202)||(26924245-26924393)
chr5 (54-197)||(18569085-18569229)
chr5 (54-197)||(22489231-22489375)
chr5 (54-197)||(24422323-24422467)
chr5 (54-196)||(24412875-24413018)
chr5 (56-206)||(30444829-30444980)
chr5 (56-206)||(30454201-30454352)
chr5 (56-206)||(30459259-30459410)
chr5 (54-139)||(37514857-37514942)
chr5 (55-197)||(4635991-4636134)
chr5 (56-113)||(22457666-22457723)
chr5 (94-196)||(22118140-22118243)
chr5 (205-265)||(42732789-42732848)
chr5 (71-197)||(31150651-31150776)
chr5 (205-265)||(26652535-26652594)
chr5 (205-265)||(26924120-26924179)
chr5 (71-197)||(5600624-5600749)
chr5 (71-197)||(5610270-5610395)
chr5 (71-137)||(1693681-1693748)
chr5 (205-243)||(5600523-5600561)
chr5 (205-243)||(5610169-5610207)
chr5 (204-242)||(11223310-11223348)
chr5 (71-139)||(16110986-16111058)
chr5 (204-242)||(20035933-20035971)
chr5 (205-243)||(31150839-31150877)
chr5 (204-242)||(33955715-33955753)
chr5 (206-243)||(17553997-17554034)
[»] chr1 (12 HSPs)
chr1 (56-265)||(21919431-21919640)
chr1 (54-197)||(14272016-14272159)
chr1 (60-197)||(14281888-14282025)
chr1 (68-197)||(3470949-3471078)
chr1 (54-196)||(5378422-5378565)
chr1 (54-203)||(21633620-21633769)
chr1 (54-196)||(26906244-26906386)
chr1 (55-137)||(40999034-40999116)
chr1 (165-197)||(15810094-15810126)
chr1 (57-196)||(30676836-30676976)
chr1 (204-242)||(14272233-14272271)
chr1 (204-242)||(14282099-14282137)
[»] scaffold0334 (1 HSPs)
scaffold0334 (56-265)||(12548-12757)
[»] chr8 (30 HSPs)
chr8 (56-265)||(33592134-33592344)
chr8 (56-265)||(33601773-33601983)
chr8 (81-265)||(42896174-42896359)
chr8 (54-197)||(12915505-12915648)
chr8 (54-197)||(42712176-42712319)
chr8 (54-197)||(20030225-20030368)
chr8 (66-266)||(24633945-24634145)
chr8 (54-197)||(12925400-12925543)
chr8 (54-197)||(20044864-20045007)
chr8 (54-196)||(18143427-18143569)
chr8 (59-195)||(18883163-18883299)
chr8 (56-196)||(25037026-25037166)
chr8 (56-196)||(25051063-25051203)
chr8 (54-196)||(4843720-4843862)
chr8 (54-197)||(12767677-12767822)
chr8 (56-202)||(31575411-31575557)
chr8 (63-195)||(18251877-18252009)
chr8 (63-195)||(18232975-18233107)
chr8 (63-195)||(18242426-18242558)
chr8 (54-196)||(20714116-20714259)
chr8 (54-137)||(7789076-7789159)
chr8 (54-121)||(20714417-20714484)
chr8 (57-139)||(15834055-15834137)
chr8 (205-265)||(31575623-31575682)
chr8 (58-139)||(24096077-24096159)
chr8 (59-115)||(26194048-26194104)
chr8 (204-242)||(12925288-12925326)
chr8 (204-242)||(20030113-20030151)
chr8 (204-242)||(20044752-20044790)
chr8 (204-242)||(42712393-42712431)
[»] chr7 (19 HSPs)
chr7 (56-231)||(13874398-13874572)
chr7 (54-197)||(14644476-14644619)
chr7 (54-197)||(33292175-33292318)
chr7 (54-197)||(14634776-14634919)
chr7 (54-197)||(15947371-15947514)
chr7 (54-196)||(32818043-32818185)
chr7 (54-196)||(9736993-9737135)
chr7 (63-195)||(11634337-11634469)
chr7 (54-179)||(48710005-48710131)
chr7 (54-206)||(7593043-7593196)
chr7 (54-197)||(15174586-15174730)
chr7 (56-137)||(19352589-19352670)
chr7 (204-264)||(32817910-32817969)
chr7 (204-242)||(9736880-9736918)
chr7 (204-242)||(14634993-14635031)
chr7 (204-242)||(14644693-14644731)
chr7 (205-243)||(14777358-14777396)
chr7 (205-243)||(15229496-15229534)
chr7 (204-242)||(28344140-28344178)
[»] scaffold0206 (2 HSPs)
scaffold0206 (54-197)||(2155-2298)
scaffold0206 (204-242)||(2043-2081)
[»] chr6 (12 HSPs)
chr6 (54-197)||(22066339-22066482)
chr6 (58-197)||(23884538-23884677)
chr6 (54-196)||(17512221-17512363)
chr6 (54-197)||(23895614-23895758)
chr6 (56-197)||(10259779-10259920)
chr6 (56-196)||(11421451-11421591)
chr6 (54-137)||(14102414-14102497)
chr6 (54-137)||(18420658-18420741)
chr6 (93-196)||(23110256-23110359)
chr6 (204-242)||(22066227-22066265)
chr6 (204-242)||(23884426-23884464)
chr6 (205-242)||(12415008-12415045)
[»] chr2 (18 HSPs)
chr2 (58-197)||(3396969-3397108)
chr2 (54-195)||(35877564-35877705)
chr2 (54-195)||(35885053-35885194)
chr2 (54-195)||(36724766-36724907)
chr2 (54-197)||(31710464-31710608)
chr2 (71-197)||(22632446-22632571)
chr2 (54-197)||(24022740-24022884)
chr2 (54-137)||(14273311-14273394)
chr2 (71-197)||(1800537-1800662)
chr2 (71-197)||(1791043-1791164)
chr2 (68-139)||(16446668-16446739)
chr2 (205-243)||(1790942-1790980)
chr2 (205-243)||(1800436-1800474)
chr2 (204-242)||(3396857-3396895)
chr2 (205-243)||(22632345-22632383)
chr2 (204-242)||(35877450-35877488)
chr2 (204-242)||(35884939-35884977)
chr2 (204-242)||(36724652-36724690)
[»] chr4 (18 HSPs)
chr4 (54-197)||(20884447-20884590)
chr4 (54-197)||(11482361-11482504)
chr4 (54-197)||(50516496-50516639)
chr4 (54-197)||(37059132-37059276)
chr4 (54-206)||(26812545-26812698)
chr4 (54-206)||(26822012-26822165)
chr4 (54-197)||(3242285-3242429)
chr4 (54-197)||(54689911-54690055)
chr4 (54-197)||(54699342-54699486)
chr4 (54-137)||(3918173-3918256)
chr4 (55-196)||(15842897-15843039)
chr4 (71-196)||(23622964-23623088)
chr4 (204-264)||(50516712-50516771)
chr4 (204-242)||(11482249-11482287)
chr4 (204-242)||(20884664-20884702)
chr4 (205-242)||(23622863-23622900)
chr4 (54-114)||(28256097-28256157)
chr4 (60-139)||(41902536-41902616)
[»] chr3 (27 HSPs)
chr3 (56-197)||(13328278-13328419)
chr3 (59-195)||(5385738-5385874)
chr3 (54-196)||(46305572-46305713)
chr3 (54-196)||(23487088-23487232)
chr3 (54-197)||(24794544-24794688)
chr3 (54-197)||(28367651-28367795)
chr3 (54-197)||(28375469-28375613)
chr3 (54-197)||(28383291-28383435)
chr3 (54-197)||(28351718-28351862)
chr3 (55-137)||(38529176-38529258)
chr3 (71-139)||(19388868-19388936)
chr3 (71-197)||(17529877-17530002)
chr3 (54-135)||(4951702-4951783)
chr3 (149-196)||(7784101-7784148)
chr3 (71-196)||(32877915-32878039)
chr3 (71-197)||(48978714-48978835)
chr3 (71-197)||(48988254-48988375)
chr3 (71-196)||(54624700-54624824)
chr3 (204-242)||(5385624-5385662)
chr3 (205-243)||(17530065-17530103)
chr3 (205-243)||(17535004-17535042)
chr3 (204-242)||(23486975-23487013)
chr3 (204-242)||(46305788-46305826)
chr3 (205-243)||(48978613-48978651)
chr3 (205-243)||(48988153-48988191)
chr3 (206-251)||(19388695-19388740)
chr3 (205-242)||(54624599-54624636)
[»] scaffold0021 (5 HSPs)
scaffold0021 (54-197)||(124093-124236)
scaffold0021 (71-196)||(100028-100152)
scaffold0021 (204-242)||(143103-143141)
scaffold0021 (205-242)||(99927-99964)
scaffold0021 (205-242)||(180850-180887)
[»] scaffold0010 (1 HSPs)
scaffold0010 (59-195)||(257006-257142)
[»] scaffold0040 (2 HSPs)
scaffold0040 (54-196)||(30821-30964)
scaffold0040 (55-196)||(10089-10230)
[»] scaffold0028 (2 HSPs)
scaffold0028 (54-197)||(94429-94573)
scaffold0028 (54-197)||(103870-104014)
[»] scaffold0001 (1 HSPs)
scaffold0001 (54-137)||(408435-408518)
[»] scaffold0482 (1 HSPs)
scaffold0482 (54-137)||(3640-3723)
[»] scaffold0269 (1 HSPs)
scaffold0269 (71-196)||(14830-14954)
[»] scaffold0247 (1 HSPs)
scaffold0247 (71-197)||(24637-24762)
[»] scaffold0223 (1 HSPs)
scaffold0223 (81-193)||(27078-27194)


Alignment Details
Target: scaffold0053 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 54 - 265
Target Start/End: Original strand, 2259 - 2470
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2259 agaataacacaggagagttatcctggttcacccaatccggctacttctagtccccacacttcttgtgagattatccactatagtatacagttggtagaaa 2358  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagtctaatagacttgagatctaatttacactct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||| |    
T  2359 cttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagcccaatagacttgagatctagtttacacttt 2458  T
Q  254 tgtatgatgatg 265  Q
    ||||||||||||    
T  2459 tgtatgatgatg 2470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 3e-91; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 56 - 265
Target Start/End: Original strand, 22448330 - 22448539
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22448330 aataacacaagagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaact 22448429  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagtctaatagacttgagatctaatttacactcttg 255  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||    
T  22448430 tctaaccaacactataaggtcttgatcacaccagatcaatccagaacacctatctcaaactattaagcccaatagactttagatctagtttacactcttg 22448529  T
Q  256 tatgatgatg 265  Q
    ||||||||||    
T  22448530 tatgatgatg 22448539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 54 - 195
Target Start/End: Original strand, 33955498 - 33955639
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  33955498 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 33955597  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33955598 cttctaaccaacactataaggtcttgatcacaccagatcagt 33955639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 20036188 - 20036044
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  20036188 agaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacatcatgtgagattatccactatagtatacagttggtagaaa 20036089  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcca 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20036088 cttctaaccaacactataaggtcttgatcacaccagatcagtcca 20036044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 193
Target Start/End: Original strand, 13815371 - 13815510
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  13815371 agaataacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcatgtgagattatccactatagtattcagttggtagaaa 13815470  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatca 193  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13815471 cttctaaccaacactataaggtcttgatcacaccagatca 13815510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 11223564 - 11223423
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||  ||||||||||||||||||| ||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11223564 agaataacacaaaagagttatcctggttcaccaaactcggctacttccagtccccacacttcgtgtgagattatccattatagtatacag-tggtagaaa 11223466  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11223465 cttctaaccaacactataaggtcttgatcacaccagatcagtc 11223423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 132 - 264
Target Start/End: Original strand, 22457723 - 22457856
Alignment:
Q  132 tatagtatacagttgg-tagaaacttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagtctaatag 230  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  22457723 tatagtatacagttgggtagaaacttctaaccaacactataaggtcatgatcacaccagatcagtccagaacacctatctcaaactattaagcccaatag 22457822  T
Q  231 acttgagatctaatttacactcttgtatgatgat 264  Q
    |||| ||||||| |||||||||||||||||||||    
T  22457823 acttaagatctagtttacactcttgtatgatgat 22457856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 42732575 - 42732723
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||| | |||||||    
T  42732575 agaataacacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaa 42732674  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtccagaac 202  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42732675 cttctaactagcactataaggtcttgatcacaccagatcagtccagaac 42732723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 60 - 195
Target Start/End: Complemental strand, 20834614 - 20834479
Alignment:
Q  60 acacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttcta 159  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||||||||||||||    
T  20834614 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacactccgtgtgagattatccactatagtatgcagttggtagaaacttcta 20834515  T
Q  160 accaacactataaggtcttgatcacaccagatcagt 195  Q
    |||||||||||||||||||||||| |||||||||||    
T  20834514 accaacactataaggtcttgatcataccagatcagt 20834479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 24244050 - 24244182
Alignment:
Q  63 caggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaacc 162  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||| |    
T  24244050 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatc 24244149  T
Q  163 aacactataaggtcttgatcacaccagatcagt 195  Q
    ||||||| || |||||||||||||| |||||||    
T  24244150 aacactacaacgtcttgatcacacccgatcagt 24244182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 24290674 - 24290806
Alignment:
Q  63 caggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaacc 162  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||| |    
T  24290674 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatc 24290773  T
Q  163 aacactataaggtcttgatcacaccagatcagt 195  Q
    ||||||| || |||||||||||||| |||||||    
T  24290774 aacactacaacgtcttgatcacacccgatcagt 24290806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 26652808 - 26652660
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||||||||||||| |||||||||| || | | ||||||| |||||||||||||| |||||||| ||||| |||||||| ||| |  ||||||    
T  26652808 agaataacacaggagagttatgctggttcaccaaacctgactacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaa 26652709  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtccagaac 202  Q
    |||||||| | |||||| ||||||||||||||||| |||||| ||||||    
T  26652708 cttctaactagcactattaggtcttgatcacaccatatcagttcagaac 26652660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 26924393 - 26924245
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||||||||||||| |||||||||| || | | ||||||| |||||||||||||| |||||||| ||||| |||||||| ||| |  ||||||    
T  26924393 agaataacacaggagagttatgctggttcaccaaacctgactacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaa 26924294  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtccagaac 202  Q
    |||||||| | |||||| ||||||||||||||||| |||||| ||||||    
T  26924293 cttctaactagcactattaggtcttgatcacaccatatcagttcagaac 26924245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 18569229 - 18569085
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  18569229 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 18569132  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  18569131 aaacttctgactagcactacaatttcttgatcacaccagatcagtcc 18569085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 22489375 - 22489231
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| ||||||   |  ||| |   ||    
T  22489375 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtc--ttgctaacag 22489278  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||| | || | ||||||||| |||||||||||||||||||||||    
T  22489277 aaacttatgactagcactataagatcttgatcacaccagatcagtcc 22489231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 24422467 - 24422323
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  24422467 agaataacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 24422370  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  24422369 aaacttctgactagcactacaatttcttgatcacaccagatcagtcc 24422323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 24413018 - 24412875
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  24413018 agaataacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 24412921  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||    
T  24412920 aaacttctgactagcactacaatttcttgatcacaccagatcagtc 24412875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 30444829 - 30444980
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---agaa 152  Q
    ||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||||    
T  30444829 aataacacaggagagttatcctgattcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaa 30444926  T
Q  153 acttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacct 206  Q
    |||||| || | ||||| ||  |||||||||||||||||||||||| |||||||    
T  30444927 acttctgactagcactacaatttcttgatcacaccagatcagtccataacacct 30444980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 30454201 - 30454352
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---agaa 152  Q
    |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||||    
T  30454201 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaa 30454298  T
Q  153 acttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacct 206  Q
    |||||| || | ||||| ||  |||||||||||||||||||||||  |||||||    
T  30454299 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacct 30454352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 30459259 - 30459410
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---agaa 152  Q
    |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||||    
T  30459259 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaa 30459356  T
Q  153 acttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacct 206  Q
    |||||| || | ||||| ||  |||||||||||||||||||||||  |||||||    
T  30459357 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacct 30459410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 37514857 - 37514942
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtat 139  Q
    ||||||||||| |||| |||| |||||||| | |||||||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  37514857 agaataacacatgagatttatactggttcatcaaagccggctacttctagtccccacaccttgtgtgagattatccactatagtat 37514942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 4636134 - 4635991
Alignment:
Q  55 gaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---aga 151  Q
    |||||||||| |||||||||||||||||||| || ||||||| ||  ||||||||||| ||  ||||||||||||| ||||||   |  ||| |   |||    
T  4636134 gaataacacatgagagttatcctggttcaccaaacccggctattttcagtccccacacctcacgtgagattatccactatagttgtc--ttgctaacaga 4636037  T
Q  152 aacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||| |||| ||||||||| |||||||||||||| ||||||||    
T  4636036 aacttctgaccagcactataagatcttgatcacaccatatcagtcc 4635991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 22457666 - 22457723
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacact 113  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  22457666 aataacacagaagagttatccttgttcacccaatccggctacttccagtccccacact 22457723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 22118140 - 22118243
Alignment:
Q  94 ctacttctagtccccacacttcttgtgagattatccattatagtatacagttggta---gaaacttctaaccaacactataaggtcttgatcacaccaga 190  Q
    ||||||| ||||||||||| || |||||||||||||||||||||   |  ||| ||   ||||||||| |  ||||||||||||||||||||||||||||    
T  22118140 ctacttccagtccccacacctcgtgtgagattatccattatagttgtc--ttgctaacagaaacttctgaataacactataaggtcttgatcacaccaga 22118237  T
Q  191 tcagtc 196  Q
    ||||||    
T  22118238 tcagtc 22118243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 42732789 - 42732848
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaatttacactcttgtatgatgatg 265  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||||||    
T  42732789 ctatctcaaactattaagcccaatagacttgagatctagtttacact-ttgtatgatgatg 42732848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 31150651 - 31150776
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| | | |   |||||||||| |  | ||||||    
T  31150651 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactat 31150749  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  31150750 aatatgttgatcacaccagatcagtcc 31150776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 26652594 - 26652535
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaatttacactcttgtatgatgatg 265  Q
    |||||||||||||||||| | | ||||||||||||||| |||||||| |||||||||||||    
T  26652594 ctatctcaaactattaagcccagtagacttgagatctagtttacact-ttgtatgatgatg 26652535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 26924179 - 26924120
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaatttacactcttgtatgatgatg 265  Q
    |||||||||||||||||| | | ||||||||||||||| |||||||| |||||||||||||    
T  26924179 ctatctcaaactattaagcccagtagacttgagatctagtttacact-ttgtatgatgatg 26924120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 5600749 - 5600624
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||  | |||||||||||||| |||||||| | | |   |||||||||| |  | ||||||    
T  5600749 ttatcctggttcgcctaa-ccggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactat 5600651  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  5600650 aatatgttgatcacaccagatcagtcc 5600624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 5610395 - 5610270
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||  | |||||||||||||| |||||||| | | |   |||||||||| |  | ||||||    
T  5610395 ttatcctggttcgcctaa-ccggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactat 5610297  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  5610296 aatatgttgatcacaccagatcagtcc 5610270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 1693681 - 1693748
Alignment:
Q  71 ttatcctggttcacccaa-gccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    ||||||| |||||||||| |  |||||| ||||||||||||||||  ||||||||| |||||||||||    
T  1693681 ttatcctagttcacccaatgtgggctacgtctagtccccacactttgtgtgagattttccattatagt 1693748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 5600561 - 5600523
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  5600561 ctatctcaaactattaagcccaatagacttgagatctaa 5600523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 5610207 - 5610169
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  5610207 ctatctcaaactattaagcccaatagacttgagatctaa 5610169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 11223348 - 11223310
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  11223348 cctatctcaaactattaagcccaatagacttgagatcta 11223310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 16111058 - 16110986
Alignment:
Q  71 ttatcctggttcacccaa-gccggctacttctagtccccacacttcttgtgagatt---atccattatagtat 139  Q
    ||||| ||||||||| || |||||||||||| |||||| ||||||| |||||||||   ||||||||||||||    
T  16111058 ttatcatggttcaccaaaagccggctacttccagtcccgacacttcgtgtgagattaccatccattatagtat 16110986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 20035971 - 20035933
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  20035971 cctatctcaaactattaagcccaatagacttgagatcta 20035933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 31150839 - 31150877
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  31150839 ctatctcaaactattaagcccaatagacttgagatctaa 31150877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 33955715 - 33955753
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  33955715 cctatctcaaactattaagcccaatagacttgagatcta 33955753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 17553997 - 17554034
Alignment:
Q  206 tatctcaaactattaagtctaatagacttgagatctaa 243  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  17553997 tatctcaaactattaagcccaatagacttgagatctaa 17554034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 2e-86; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 56 - 265
Target Start/End: Original strand, 21919431 - 21919640
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||| | |||||||||||||||    
T  21919431 aataacacaggagagttatcctgattcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagttttcagttggtagaaact 21919530  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagtctaatagacttgagatctaatttacactcttg 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| ||||||||| ||    
T  21919531 tctaaccaacactataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagcccaatagacttgagaactagtttacactcatg 21919630  T
Q  256 tatgatgatg 265  Q
    ||||||||||    
T  21919631 tatgatgatg 21919640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 14272016 - 14272159
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  14272016 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 14272115  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  14272116 cttctaacaaacactataaggtcttgatcacaccagatcagtcc 14272159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 14281888 - 14282025
Alignment:
Q  60 acacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttcta 159  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||    
T  14281888 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 14281987  T
Q  160 accaacactataaggtcttgatcacaccagatcagtcc 197  Q
    || |||||||||||||||||||||||||||||||||||    
T  14281988 acaaacactataaggtcttgatcacaccagatcagtcc 14282025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 3470949 - 3471078
Alignment:
Q  68 gagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacac 167  Q
    |||||||||||||||||| || |||| |||||| || ||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||     
T  3470949 gagttatcctggttcaccaaacccggttacttccagcccccacacttcatgtgagattatccactgtagtatacaattggtagaaacttctaaccaacat 3471048  T
Q  168 tataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||    
T  3471049 tataaggtcttgatcacaccagatcagtcc 3471078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 5378422 - 5378565
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| ||||||   |  ||| |   ||    
T  5378422 agaataacacaggagaattatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtc--ttgctaacag 5378519  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||    
T  5378520 aaacttctaactagcactataaggtcttgatcacaccagatcagtc 5378565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 203
Target Start/End: Complemental strand, 21633769 - 21633620
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||| || |  ||| |||||||||| || |||||||| |||||||||||||||| ||||||||||||||| |||||||| |   | |||||||    
T  21633769 agaataacacaagataaatattctggttcaccaaacccggctacgtctagtccccacactttttgtgagattatccactatagtattctactagtagaaa 21633670  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtccagaaca 203  Q
    ||||| || | || |||||||||||| ||||||||||||||||| |||||    
T  21633669 cttctgactagcattataaggtcttggtcacaccagatcagtccggaaca 21633620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 26906244 - 26906386
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||| |||| ||||||||||||||| || | |||||||||||||||||| || || ||||||||||||||||||| |||   |||   |||||    
T  26906244 agaataacacacgagatttatcctggttcaccaaaccaggctacttctagtccccatacctcgtgtgagattatccattataatatcttgttaacagaaa 26906343  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    ||||| || | ||||||||| ||||| ||||||||||||||||    
T  26906344 cttctgactagcactataagttcttggtcacaccagatcagtc 26906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 40999034 - 40999116
Alignment:
Q  55 gaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    ||||||||||  ||||||||||||||||||| || ||| | ||||| ||||||||||| || |||||||||||||| ||||||    
T  40999034 gaataacacataagagttatcctggttcaccaaacccgacaacttccagtccccacacctcgtgtgagattatccactatagt 40999116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 15810094 - 15810126
Alignment:
Q  165 cactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||||||||||||||||||||||||||||    
T  15810094 cactataaggtcttgatcacaccagatcagtcc 15810126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 196
Target Start/End: Complemental strand, 30676976 - 30676836
Alignment:
Q  57 ataacacaggagagttatcctggttcacccaa-gccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||  ||| ||||| |||||||| ||| || | ||||||  |||||||||||||| ||||||||||||||||| | ||| ||| |   |||||||    
T  30676976 ataacacacaagatttatcatggttcacacaaagcagactactttcagtccccacacttcgtgtgagattatccattacaatattcagctataagaaact 30676877  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    | | |  | ||||||| | |||||||||||| |||||||||    
T  30676876 tatgaatagcactatatgttcttgatcacacaagatcagtc 30676836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 14272233 - 14272271
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  14272233 cctatctcaaactattaagcccaatagacttgagatcta 14272271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 14282099 - 14282137
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  14282099 cctatctcaaactattaagcccaatagacttgagatcta 14282137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 56 - 265
Target Start/End: Original strand, 12548 - 12757
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||||||||||||| |||||| |  ||||||||||||||    
T  12548 aataacataggagagttatcctggttcacccaatccggctacttccagtccctacacttcgtgtgagattatccactatagtttttagttggtagaaact 12647  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagtctaatagacttgagatctaatttacactcttg 255  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||||| ||| ||||||||||||    
T  12648 tctaaccaacactataaggtcttgatcacaccagattagtccagaacacctatctcaaactattacgcccaatagacttgagaactagtttacactcttg 12747  T
Q  256 tatgatgatg 265  Q
    ||||||||||    
T  12748 tatgatgatg 12757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 4e-75; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 56 - 265
Target Start/End: Original strand, 33592134 - 33592344
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||| | ||||||  |||||||    
T  33592134 aataacacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagttttcagttgacagaaact 33592233  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtccagaacaccta-tctcaaactattaagtctaatagacttgagatctaatttacactctt 254  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | ||||||||||||| |||  ||||||||||    
T  33592234 tctgaccaacactataaggtcttgatcacactagatcagtccagaacacctattctcaaactattaagcccaatagacttgagaactagattacactctt 33592333  T
Q  255 gtatgatgatg 265  Q
    |||||||||||    
T  33592334 gtatgatgatg 33592344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 56 - 265
Target Start/End: Original strand, 33601773 - 33601983
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||| | ||||||  |||||||    
T  33601773 aataacacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagttttcagttgacagaaact 33601872  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtccagaacaccta-tctcaaactattaagtctaatagacttgagatctaatttacactctt 254  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | ||||||||||||| |||  ||||||||||    
T  33601873 tctgaccaacactataaggtcttgatcacactagatcagtccagaacacctattctcaaactattaagcccaatagacttgagaactagattacactctt 33601972  T
Q  255 gtatgatgatg 265  Q
    |||||||||||    
T  33601973 gtatgatgatg 33601983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 81 - 265
Target Start/End: Original strand, 42896174 - 42896359
Alignment:
Q  81 tcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactataaggtcttga 180  Q
    |||||||| ||||||||||| |||| ||||||||| |||||||||||||| |||||  | |||||| |||||||||||||||||||||||||||||||||    
T  42896174 tcacccaatccggctacttccagtctccacacttcgtgtgagattatccactatagatttcagttgatagaaacttctaaccaacactataaggtcttga 42896273  T
Q  181 tcacaccagatcagtccagaacaccta-tctcaaactattaagtctaatagacttgagatctaatttacactcttgtatgatgatg 265  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| |||  |||||||||||||||||||||    
T  42896274 tcacaccagatcagtccagaacacctattctcaaactattaagcccaatagacttgagaactagattacactcttgtatgatgatg 42896359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 12915648 - 12915505
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  12915648 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 12915549  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12915548 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 12915505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 42712176 - 42712319
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  42712176 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 42712275  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  42712276 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 42712319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 20030368 - 20030225
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| |||    
T  20030368 agaataacacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaa 20030269  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20030268 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 20030225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 66 - 266
Target Start/End: Complemental strand, 24634145 - 24633945
Alignment:
Q  66 gagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaac 165  Q
    |||||||||||||||||  | || ||| ||||||| |||||||||||||| ||||| |||||||| |||||||| ||| | ||||||||||||||| | |    
T  24634145 gagagttatcctggttcctcaaacccgactacttccagtccccacacttcgtgtgatattatccactatagtattcagctagtagaaacttctaactagc 24634046  T
Q  166 actataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagtctaatagacttgagatctaatttacactcttgtatgatgatg 265  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||  | ||||||||||||||||| ||||||||||| ||||||||||    
T  24634045 actataaggtcttgatcacaccagatcagtccataactcctatcccaaactattaaacccaatagacttgagatctagtttacactcttttatgatgatg 24633946  T
Q  266 t 266  Q
    |    
T  24633945 t 24633945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 12925543 - 12925400
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||  || ||| ||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  12925543 agaataacacaggagagttatcctggttcacgaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 12925444  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12925443 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 12925400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 20045007 - 20044864
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||| |||||||||||||||||||| || |||||||| || |||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  20045007 agaataacacatgagagttatcctggttcaccaaacccggctacatccagtccccacacttcgtgtgagattatccacgatagtatacagttggtagaaa 20044908  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20044907 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 20044864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 18143427 - 18143569
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||| |||||||||||||| |||||||||||||| ||||| || ||||||||| |||    
T  18143427 agaataacacaggagagttatcttggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagcattcagttggtaaaaa 18143526  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18143527 cttctaaccaacactataaggtcttgatcacaccagatcagtc 18143569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 18883163 - 18883299
Alignment:
Q  59 aacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttct 158  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||    
T  18883163 aacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaaattct 18883262  T
Q  159 aaccaacactataaggtcttgatcacaccagatcagt 195  Q
    |||||||||||||| ||||||||||||||||||||||    
T  18883263 aaccaacactataaagtcttgatcacaccagatcagt 18883299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 25037026 - 25037166
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||| |||||||||| |||||||||||| | ||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  25037026 aataacacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaact 25037125  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  25037126 tctaaccaacactataaagtcttgatcacaccagatcagtc 25037166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 25051063 - 25051203
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||| |||||||||| |||||||||||| | ||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  25051063 aataacacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaact 25051162  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  25051163 tctaaccaacactataatgtcttgatcacaccagatcagtc 25051203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 4843720 - 4843862
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||| |||||||||||||||||||||  || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  4843720 agaataacaaaggagagttatcctggttcactaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaa 4843819  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
     |||||||||| |||||||||||||||||||||||||||||||    
T  4843820 tttctaaccaagactataaggtcttgatcacaccagatcagtc 4843862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 12767822 - 12767677
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttcta--gtccccacacttcttgtgagattatccattatagtatacagttggtaga 151  Q
    |||||||||||||||||||||||||||||||| |  |||| |||||| |  ||||||||| ||| |||||||||||||| |||||||| |||||||||||    
T  12767822 agaataacacaggagagttatcctggttcaccaatcccggttacttccacagtccccacatttcgtgtgagattatccactatagtattcagttggtaga 12767723  T
Q  152 aacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12767722 aacttctaaccaacactataaggtcttgatcacaccagatcagtcc 12767677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 56 - 202
Target Start/End: Original strand, 31575411 - 31575557
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||| | |||||||||    
T  31575411 aataacacaagagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaact 31575510  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtccagaac 202  Q
    |||||| | |||||||||||||||||||||||| |||||||||||||    
T  31575511 tctaactagcactataaggtcttgatcacaccaaatcagtccagaac 31575557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 18252009 - 18251877
Alignment:
Q  63 caggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaacc 162  Q
    |||||||||||||||| |||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  18252009 caggagagttatcctgattcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaacc 18251910  T
Q  163 aacactataaggtcttgatcacaccagatcagt 195  Q
    |||||||||| |||||||||||||| |||||||    
T  18251909 aacactataacgtcttgatcacacccgatcagt 18251877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 18233107 - 18232975
Alignment:
Q  63 caggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaacc 162  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||| |    
T  18233107 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatc 18233008  T
Q  163 aacactataaggtcttgatcacaccagatcagt 195  Q
    ||||||| || |||||||||||||| |||||||    
T  18233007 aacactacaacgtcttgatcacacccgatcagt 18232975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 18242558 - 18242426
Alignment:
Q  63 caggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaacc 162  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||| |    
T  18242558 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatc 18242459  T
Q  163 aacactataaggtcttgatcacaccagatcagt 195  Q
    ||||||| || |||||||||||||| |||||||    
T  18242458 aacactacaacgtcttgatcacacccgatcagt 18242426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 20714259 - 20714116
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||| || ||||| |||||||||||||||   |  ||| |   ||    
T  20714259 agaataacacatgagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgacattatccattatagttgtc--ttgctaacag 20714162  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    |||||||| || | ||||||||| ||||||||||||||||||||||    
T  20714161 aaacttctgactagcactataagatcttgatcacaccagatcagtc 20714116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 7789076 - 7789159
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    |||||||||||||||| |||| |||||||||| || ||||||||||| ||||||||||| || |||||||||||||| ||||||    
T  7789076 agaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagt 7789159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 20714484 - 20714417
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtga 121  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||| || |||||    
T  20714484 agaataacacatgagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtga 20714417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 139
Target Start/End: Complemental strand, 15834137 - 15834055
Alignment:
Q  57 ataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtat 139  Q
    |||||||| |||| ||||| ||||||||| || ||||||||||  ||||| ||||| || |||||||||||||||||||||||    
T  15834137 ataacacaagagatttatcttggttcaccaaatccggctactttcagtccacacacctcgtgtgagattatccattatagtat 15834055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 31575623 - 31575682
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaatttacactcttgtatgatgatg 265  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||| |||||||||||||    
T  31575623 ctatctcaaactattaagcccaatagacttgagatctagtttacact-ttgtatgatgatg 31575682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 24096077 - 24096159
Alignment:
Q  58 taacacaggagagttatcctggttcacccaagccggctacttctagt-ccccacacttcttgtgagattatccattatagtat 139  Q
    |||||||||||| |||| |||||||||| ||  || ||||||| ||| |||||||| || |||||||||||||| ||||||||    
T  24096077 taacacaggagatttattctggttcaccaaactcgactacttccagtcccccacacctcgtgtgagattatccactatagtat 24096159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 26194048 - 26194104
Alignment:
Q  59 aacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttc 115  Q
    |||||| |||||||||||||||||| | || ||  ||||||||||||||||||||||    
T  26194048 aacacatgagagttatcctggttcatcaaacccaactacttctagtccccacacttc 26194104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 12925326 - 12925288
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  12925326 cctatctcaaactattaagcccaatagacttgagatcta 12925288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 20030151 - 20030113
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  20030151 cctatctcaaactattaagccaaatagacttgagatcta 20030113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 20044790 - 20044752
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  20044790 cctatctcaaactattaagcccaatagacttgagatcta 20044752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 42712393 - 42712431
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  42712393 cctatctcaaactattaagcccaatagacttgagatcta 42712431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 5e-71; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 56 - 231
Target Start/End: Complemental strand, 13874572 - 13874398
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||||| |||||| | |||||||||||||||    
T  13874572 aataacacaggagagttatcctggttcacccaatccg-ctacttccagtccccacacttcgtgtgagattatccactatagttttcagttggtagaaact 13874474  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagtctaataga 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  13874473 tctaaccaacactataaggtcttgatcacaccagatcagtccagaacacctatctcaaactattaagcccaataga 13874398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 14644476 - 14644619
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  14644476 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 14644575  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14644576 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 14644619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 33292175 - 33292318
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  33292175 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 33292274  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33292275 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 33292318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 14634776 - 14634919
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||| |||||||||    
T  14634776 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagctggtagaaa 14634875  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14634876 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 14634919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 15947371 - 15947514
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||||| |||||||||||||| |||||||| |||||||||||||    
T  15947371 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtcaccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 15947470  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15947471 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 15947514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 32818185 - 32818043
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  32818185 agaataacacaggagagttatcctggttcaccaaacccggctacttccggtccccacacttcgtgtgagattatccactatagtattcagttggtagaaa 32818086  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32818085 cttctaaccaacactataaggtcttgatcacaccagatcagtc 32818043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 9737135 - 9736993
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  9737135 agaataacacaggagagttatcctggttcactaaacccggctacttccagtccccacacttcgtgtgagattatccattatagtattcagtttgtagaaa 9737036  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  9737035 cttctaaccaacactataaggccttgatcacaccagatcagtc 9736993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 11634337 - 11634469
Alignment:
Q  63 caggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaacc 162  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  11634337 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaacc 11634436  T
Q  163 aacactataaggtcttgatcacaccagatcagt 195  Q
    |||||||||| |||||||||||||| |||||||    
T  11634437 aacactataacgtcttgatcacacccgatcagt 11634469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 48710005 - 48710131
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtcccc-acacttcttgtgagattatccattatagtatacagttggtagaa 152  Q
    ||||||||||||||||| ||| |||||||||| ||  ||| |||||| ||||||| ||||||| |||||||||||||| |||||||| ||| | ||||||    
T  48710005 agaataacacaggagagatattctggttcaccaaactcggatacttccagtcccccacacttcgtgtgagattatccactatagtattcagctagtagaa 48710104  T
Q  153 acttctaaccaacactataaggtcttg 179  Q
    ||||||||| | |||||||||||||||    
T  48710105 acttctaactagcactataaggtcttg 48710131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 7593196 - 7593043
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    ||||||||||| |||||||||||||||||||| || | ||||||||| ||||||||||| || ||||||||||||||||||||| | |  ||| |   ||    
T  7593196 agaataacacaagagagttatcctggttcaccaaacctggctacttccagtccccacacctcgtgtgagattatccattatagttttc--ttgctaacag 7593099  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacct 206  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||  |||||||    
T  7593098 aaacttctgactagcactacaatatcttgatcacaccagatcagtccgtaacacct 7593043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 15174730 - 15174586
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   |     
T  15174730 agaataacacaggagatttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacaa 15174633  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||| |||||||||||||||||||||||    
T  15174632 aaacttctgactagcactacaagatcttgatcacaccagatcagtcc 15174586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 19352589 - 19352670
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    ||||| ||||||||||||| |||||||||| ||  |||||||||| ||||| |||||||| |||||||||||||| ||||||    
T  19352589 aataatacaggagagttatactggttcaccaaattcggctacttccagtcctcacacttcgtgtgagattatccactatagt 19352670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 32817969 - 32817910
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatctaatttacactcttgtatgatgat 264  Q
    ||||||| ||||||||||| | ||||||||||||||||| |||||||| ||||| ||||||    
T  32817969 cctatcttaaactattaagcccaatagacttgagatctagtttacact-ttgtaggatgat 32817910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 9736918 - 9736880
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  9736918 cctatctcaaactattaagcccaatagacttgagatcta 9736880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 14634993 - 14635031
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  14634993 cctatctcaaactattaagcccaatagacttgagatcta 14635031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 14644693 - 14644731
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  14644693 cctatctcaaactattaagcccaatagacttgagatcta 14644731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 14777396 - 14777358
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  14777396 ctatctcaaactattaagcccaatagacttgagatctaa 14777358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 15229534 - 15229496
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  15229534 ctatctcaaactattaagcccaatagacttgagatctaa 15229496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 28344178 - 28344140
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  28344178 cctatctcaaactattaagcccaatagacttgagatcta 28344140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 2298 - 2155
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| |||    
T  2298 agaataacacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaa 2199  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2198 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 2155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 2081 - 2043
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  2081 cctatctcaaactattaagccaaatagacttgagatcta 2043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 5e-59; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 22066482 - 22066339
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  22066482 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 22066383  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  22066382 cttctaaccaacactataaggtcttgatcacactagatcagtcc 22066339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 23884677 - 23884538
Alignment:
Q  58 taacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttc 157  Q
    |||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||| |||| |||||||| |||||||||||||||||    
T  23884677 taacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattgtccactatagtatgcagttggtagaaacttc 23884578  T
Q  158 taaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23884577 taaccaacactataaggtcttgatcacaccagatcagtcc 23884538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 17512221 - 17512363
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||| ||||||||||||||||||| ||  |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17512221 agaataacacagaagagttatcctggttcaccaaactcggctactttcagtccccacacttcttgtgagattatccactatagtatacagttggtagaaa 17512320  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  17512321 cttctaaccaacactataaagtcttgatcacactagatcagtc 17512363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 23895614 - 23895758
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  23895614 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 23895711  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  23895712 aaacttctgactagcactacaatatcttgatcacaccagatcagtcc 23895758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 10259779 - 10259920
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    |||||||||||||| |||| |||||||||| || || |||||||| ||||| |||||||| |||| |||| |||| |||||||| | | |   |||||||    
T  10259779 aataacacaggagaattattctggttcaccaaatccagctacttccagtcctcacacttcgtgtgggattctccactatagtatcctgctaagagaaact 10259878  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||| || | ||||||||  |||||||||||||||||||||||    
T  10259879 tctgactagcactataaattcttgatcacaccagatcagtcc 10259920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 11421451 - 11421591
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    ||||||||| || | ||||||| ||||| | || ||||||||||| ||||||||||| || |||||||||||||| ||||||||   |||   | ||| |    
T  11421451 aataacacaagataattatcctagttcatcaaatccggctacttccagtccccacacctcgtgtgagattatccactatagtatcatgttaacaaaaaat 11421550  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    ||| || ||||||||||| ||||||||||||||||||||||    
T  11421551 tctgactaacactataagatcttgatcacaccagatcagtc 11421591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 14102497 - 14102414
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    |||||||||| | ||| ||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  14102497 agaataacactgaagaattatcctggttcaccaaacccggctacttccagtccccacacctcttgtgagattatccactatagt 14102414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 18420741 - 18420658
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    |||||||||||||| ||||||||||||||||  || ||||||||||| |||||| |||| || ||||||||||| || ||||||    
T  18420741 agaataacacaggatagttatcctggttcacaaaacccggctacttccagtcccgacacctcgtgtgagattatacactatagt 18420658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 23110256 - 23110359
Alignment:
Q  93 gctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatc 192  Q
    |||||||| |||||||||||  | ||| |||||||||| |||||||| | | |   |||||||||| || | ||||||| | |||||||||||||||||     
T  23110256 gctacttccagtccccacaccccgtgttagattatccactatagtattcggctaacagaaacttctgactagcactatatgttcttgatcacaccagata 23110355  T
Q  193 agtc 196  Q
    ||||    
T  23110356 agtc 23110359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 22066265 - 22066227
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  22066265 cctatctcaaactattaagcccaatagacttgagatcta 22066227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 23884464 - 23884426
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  23884464 cctatctcaaactattaagcccaatagacttgagatcta 23884426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 12415045 - 12415008
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatcta 242  Q
    |||||||||||||||||| | |||||||||||||||||    
T  12415045 ctatctcaaactattaagcccaatagacttgagatcta 12415008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 5e-59; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 3397108 - 3396969
Alignment:
Q  58 taacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttc 157  Q
    |||||||||||||||||| ||||||||| || || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  3397108 taacacaggagagttatcatggttcaccaaacccagctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaacttc 3397009  T
Q  158 taaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3397008 taaccaacactataaggtcttgatcacaccagatcagtcc 3396969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 54 - 195
Target Start/End: Complemental strand, 35877705 - 35877564
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  35877705 agaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 35877606  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35877605 cttctaaccaacactataaggtcttgatcacaccagatcagt 35877564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 54 - 195
Target Start/End: Complemental strand, 35885194 - 35885053
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  35885194 agaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 35885095  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35885094 cttctaaccaacactataaggtcttgatcacaccagatcagt 35885053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 54 - 195
Target Start/End: Complemental strand, 36724907 - 36724766
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  36724907 agaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 36724808  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36724807 cttctaaccaacactataaggtcttgatcacaccagatcagt 36724766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 31710464 - 31710608
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    ||||||||||| |||||||||||| ||||||| || ||||||||||| ||||||||||| || |||||||||||||| ||||||   |  ||| |   ||    
T  31710464 agaataacacatgagagttatccttgttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtc--ttgctaacag 31710561  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||||||| |||||||||||||||||||||||    
T  31710562 aaacttctgactagcactataagatcttgatcacaccagatcagtcc 31710608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 22632571 - 22632446
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| | | |   |||||||||| || ||||||||    
T  22632571 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgactaacactat 22632473  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  22632472 aatatgttgatcacaccagatcagtcc 22632446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 24022740 - 24022884
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||  ||||||||||||| ||||||| || ||||||||||| | | ||||||| || |||||||||||||| ||||||   |  ||| |   ||    
T  24022740 agaataacattggagagttatcctcgttcaccaaacccggctacttccaattcccacacctcgtgtgagattatccactatagttgtc--ttgctaacag 24022837  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||||||| |||||||||||||||||||||||    
T  24022838 aaacttctgactagcactataagatcttgatcacaccagatcagtcc 24022884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 14273394 - 14273311
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    ||||||||||| |||| ||||||||||||||| || ||||||||||  |||| |||||| || |||||||||||||| ||||||    
T  14273394 agaataacacacgagaattatcctggttcaccaaacccggctactttcagtctccacacctcgtgtgagattatccactatagt 14273311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 1800662 - 1800537
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| | | |   |||||||||| |  | ||||||    
T  1800662 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactat 1800564  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  1800563 aatatgttgatcacaccagatcagtcc 1800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 1791164 - 1791043
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| ||      |||||||||| |  | ||||||    
T  1791164 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcca----tcagaaacttctgaatagcactat 1791070  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  1791069 aatatgttgatcacaccagatcagtcc 1791043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 16446739 - 16446668
Alignment:
Q  68 gagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtat 139  Q
    |||||||||||| ||||  || ||| ||||||  |||||||||| ||| |||||||||||||| ||||||||    
T  16446739 gagttatcctggatcactaaatccgactactttcagtccccacatttcgtgtgagattatccactatagtat 16446668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 1790980 - 1790942
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  1790980 ctatctcaaactattaagcccaatagacttgagatctaa 1790942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 1800474 - 1800436
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  1800474 ctatctcaaactattaagcccaatagacttgagatctaa 1800436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 3396895 - 3396857
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  3396895 cctatctcaaactattaagcccaatagacttgagatcta 3396857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 22632383 - 22632345
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  22632383 ctatctcaaactattaagcccaatagacttgagatctaa 22632345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 35877488 - 35877450
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  35877488 cctatctcaaactattaagcccaatagacttgagatcta 35877450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 35884977 - 35884939
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  35884977 cctatctcaaactattaagcccaatagacttgagatcta 35884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 36724690 - 36724652
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  36724690 cctatctcaaactattaagcccaatagacttgagatcta 36724652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 20884447 - 20884590
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  20884447 agaataacacaggagagttatcctggttccccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 20884546  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  20884547 cttctaaccaacactataaggttttgatcacaccagatcagtcc 20884590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 11482504 - 11482361
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||  ||||||||||||||||||  || || |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  11482504 agaataacgtaggagagttatcctggttgtccaaacccggctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaa 11482405  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||    
T  11482404 cttctaaccaacactataaggtctttatcacaccatatcagtcc 11482361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 50516496 - 50516639
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    ||||||||||||||||||||||||||||| || || ||| ||||||| |||||||||||||| |||||||||||||| |||||||| | |||||||||||    
T  50516496 agaataacacaggagagttatcctggttccccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtattccgttggtagaaa 50516595  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  50516596 tttctaaccaacactataaggtcttgatcacaccagatcagtcc 50516639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 37059276 - 37059132
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  37059276 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 37059179  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||| |||||||||||||||||||||||    
T  37059178 aaacttctgactagcactacaagatcttgatcacaccagatcagtcc 37059132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 26812698 - 26812545
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  26812698 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 26812601  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacct 206  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||  |||||||    
T  26812600 aaacttctgactagcactacaatatcttgatcacaccagatcagtccgtaacacct 26812545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 26822165 - 26822012
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  26822165 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 26822068  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacct 206  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||  |||||||    
T  26822067 aaacttctgactagcactacaatatcttgatcacaccagatcagtccgtaacacct 26822012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 3242285 - 3242429
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  3242285 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 3242382  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  3242383 aaacttctgactagcactacaatttcttgatcacaccagatcagtcc 3242429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 54689911 - 54690055
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  54689911 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 54690008  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  54690009 aaacttctgactagcactacaatttcttgatcacaccagatcagtcc 54690055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 54699342 - 54699486
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  54699342 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 54699439  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  54699440 aaacttctgactagcactacaatttcttgatcacaccagatcagtcc 54699486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 3918256 - 3918173
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| ||||||    
T  3918256 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagt 3918173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 15842897 - 15843039
Alignment:
Q  55 gaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---aga 151  Q
    ||||||||||||||||||||| ||||||||| ||  |||||||||| ||||||||||| || |||||||||||||| ||||||   |  ||| |   |||    
T  15842897 gaataacacaggagagttatcttggttcaccaaactcggctacttccagtccccacacctcgtgtgagattatccactatagttgtc--ttgctaacaga 15842994  T
Q  152 aacttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    ||||||| || | ||||||||| ||||||||||| ||||||||||    
T  15842995 aacttctgactagcactataagatcttgatcacatcagatcagtc 15843039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 23623088 - 23622964
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| | | |   |||||||||| |  | ||||||    
T  23623088 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactat 23622990  T
Q  171 aaggtcttgatcacaccagatcagtc 196  Q
    ||  | ||||||||||||||||||||    
T  23622989 aatatgttgatcacaccagatcagtc 23622964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 50516712 - 50516771
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatctaatttacactcttgtatgatgat 264  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||| ||||| ||||||    
T  50516712 cctatctcaaactattaagcccaatagacttgagatctattttacact-ttgtaggatgat 50516771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 11482287 - 11482249
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  11482287 cctatctcaaactattaagccgaatagacttgagatcta 11482249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 20884664 - 20884702
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  20884664 cctatctcaaactattaagcccaatagacttgagatcta 20884702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 23622900 - 23622863
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatcta 242  Q
    |||||||||||||||||| | |||||||||||||||||    
T  23622900 ctatctcaaactattaagcccaatagacttgagatcta 23622863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 28256097 - 28256157
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacactt 114  Q
    |||||||||||||||| ||||| ||||||| | |||  ||||||||  |||||||||||||    
T  28256097 agaataacacaggagatttatcgtggttcatcaaagttggctactttcagtccccacactt 28256157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 41902536 - 41902616
Alignment:
Q  60 acacaggagagttatcctggttcaccc-aagccggctacttctagtccccacacttcttgtgagattatccattatagtat 139  Q
    ||||| |||| |||||||||||||| | ||||  | |||||| ||||||||  || |||||||||||||||| ||||||||    
T  41902536 acacaagagatttatcctggttcactcgaagcaagttacttccagtccccaggctccttgtgagattatccactatagtat 41902616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 13328278 - 13328419
Alignment:
Q  56 aataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaact 155  Q
    |||||||||||||||||||| ||||||||| || ||| ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  13328278 aataacacaggagagttatcttggttcaccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaact 13328377  T
Q  156 tctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  13328378 tctaaccaacactattaggtcttgatcacaccagatcagtcc 13328419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 5385874 - 5385738
Alignment:
Q  59 aacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttct 158  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||||||| || |||||||||||    
T  5385874 aacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagctgatagaaacttct 5385775  T
Q  159 aaccaacactataaggtcttgatcacaccagatcagt 195  Q
    |||||||||||||||||||||||||||||||||||||    
T  5385774 aaccaacactataaggtcttgatcacaccagatcagt 5385738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 46305572 - 46305713
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||| ||||||| | || ||||||||||| |||||||||||||| | |||||||||||| | ||||||||||||||||||||    
T  46305572 agaataacacaggagagttatcttggttcatcaaacccggctacttccagtccccacacttcgt-tgagattatccactttagtatacagttggtagaaa 46305670  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46305671 cttctaaccaacactataaggtcttgatcacaccagatcagtc 46305713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 23487232 - 23487088
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttcta--gtccccacacttcttgtgagattatccattatagtatacagttggtaga 151  Q
    |||||||||||||||||||||||||||||||| |  |||| |||||| |  ||||||||| ||| |||||||||||||| |||||||| |||||||||||    
T  23487232 agaataacacaggagagttatcctggttcaccaatcccggttacttccacagtccccacatttcgtgtgagattatccactatagtattcagttggtaga 23487133  T
Q  152 aacttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23487132 aacttctaaccaacactataaggtcttgatcacaccagatcagtc 23487088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 24794544 - 24794688
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  24794544 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 24794641  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  24794642 aaacttctgactagcactacaatttcttgatcacaccagatcagtcc 24794688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 28367651 - 28367795
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  28367651 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 28367748  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  28367749 aaacttctgactagcactacaatatcttgatcacaccagatcagtcc 28367795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 28375469 - 28375613
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  28375469 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 28375566  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  28375567 aaacttctgactagcactacaatatcttgatcacaccagatcagtcc 28375613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 28383291 - 28383435
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  28383291 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 28383388  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  28383389 aaacttctgactagcactacaatatcttgatcacaccagatcagtcc 28383435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 28351718 - 28351862
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  28351718 agaataacacaggagagttatgctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 28351815  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  28351816 aaacttctgactagcactacaatatcttgatcacaccagatcagtcc 28351862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 38529176 - 38529258
Alignment:
Q  55 gaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    |||||| |||||||||||||| | ||||||| || ||||||||||| ||| ||||||| || |||||||||||||| ||||||    
T  38529176 gaataatacaggagagttatcatagttcaccaaacccggctacttccagtgcccacacctcgtgtgagattatccactatagt 38529258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 19388936 - 19388868
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtat 139  Q
    ||||||||||||||| ||  |||||||||| |||||||||||||| |||||||||||| | ||||||||    
T  19388936 ttatcctggttcaccaaaatcggctacttcaagtccccacacttcgtgtgagattatcgactatagtat 19388868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 17529877 - 17530002
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| | | |   |||||||||| |  | ||||||    
T  17529877 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactat 17529975  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  17529976 aatatgttgatcacaccagatcagtcc 17530002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 4951783 - 4951702
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattata 135  Q
    ||||||||||| |||||||||| ||||||||| ||  || ||||||| ||||| ||||| || |||||||||||||| ||||    
T  4951783 agaataacacatgagagttatcttggttcaccaaactcgactacttcaagtcctcacacctcgtgtgagattatccactata 4951702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 7784101 - 7784148
Alignment:
Q  149 agaaacttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    |||||||| | || ||||||||||||||||||||||||||||||||||    
T  7784101 agaaacttatgactaacactataaggtcttgatcacaccagatcagtc 7784148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 32878039 - 32877915
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| ||||||||   | |   | |||||||| |  ||||||||    
T  32878039 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcatgctatcataaacttctgaataacactat 32877941  T
Q  171 aaggtcttgatcacaccagatcagtc 196  Q
    ||  | ||||||||||||||||||||    
T  32877940 aatttgttgatcacaccagatcagtc 32877915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 48978835 - 48978714
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| ||      |||||||||| |  | ||||||    
T  48978835 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcca----tcagaaacttctgaatagcactat 48978741  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  48978740 aatatgttgatcacaccagatcagtcc 48978714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 48988375 - 48988254
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| ||      |||||||||| |  | ||||||    
T  48988375 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcca----tcagaaacttctgaatagcactat 48988281  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  48988280 aatatgttgatcacaccagatcagtcc 48988254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 54624824 - 54624700
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| | | |   |||||||||| |  | ||||||    
T  54624824 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactat 54624726  T
Q  171 aaggtcttgatcacaccagatcagtc 196  Q
    ||  | ||||||| ||||||||||||    
T  54624725 aatatgttgatcataccagatcagtc 54624700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 5385662 - 5385624
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  5385662 cctatctcaaactattaagcccaatagacttgagatcta 5385624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 17530065 - 17530103
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  17530065 ctatctcaaactattaagcccaatagacttgagatctaa 17530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 17535004 - 17535042
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  17535004 ctatctcaaactattaagcccaatagacttgagatctaa 17535042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 23487013 - 23486975
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  23487013 cctatctcaaactattaagcccaatagacttgagatcta 23486975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 46305788 - 46305826
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  46305788 cctatctcaaactattaagcccaatagacttgagatcta 46305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 48978651 - 48978613
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  48978651 ctatctcaaactattaagcccaatagacttgagatctaa 48978613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 48988191 - 48988153
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatctaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  48988191 ctatctcaaactattaagcccaatagacttgagatctaa 48988153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 19388740 - 19388695
Alignment:
Q  206 tatctcaaactattaagtctaatagacttgagatctaatttacact 251  Q
    |||||||||||| |||  |||||||||||||||||||| |||||||    
T  19388740 tatctcaaactactaatcctaatagacttgagatctaagttacact 19388695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 54624636 - 54624599
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatcta 242  Q
    |||||||||||||||||| | |||||||||||||||||    
T  54624636 ctatctcaaactattaagcccaatagacttgagatcta 54624599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 108; Significance: 3e-54; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 124236 - 124093
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaa 153  Q
    |||||||||||||||||||||||||||||| | || || | |||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  124236 agaataacacaggagagttatcctggttcatcaaatcctgttacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaa 124137  T
Q  154 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  124136 cttctaaccaacactataaggtcttgatcacaccagatcagtcc 124093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 100152 - 100028
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||  || |||||||||||| | ||||||||||||||||||||||| | | |   |||||||||| |  | ||||||    
T  100152 ttatcctggttcgcctaa-ccggctatgtccagtccccacactacgtgtgagattatccattatagtatcctgctatcagaaacttctgaatagcactat 100054  T
Q  171 aaggtcttgatcacaccagatcagtc 196  Q
    ||  | |||||||||||| |||||||    
T  100053 aatatgttgatcacaccaaatcagtc 100028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 143141 - 143103
Alignment:
Q  204 cctatctcaaactattaagtctaatagacttgagatcta 242  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  143141 cctatctcaaactattaagcccaatagacttgagatcta 143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 99964 - 99927
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatcta 242  Q
    |||||||||||||||||| | |||||||||||||||||    
T  99964 ctatctcaaactattaagcccaatagacttgagatcta 99927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 180887 - 180850
Alignment:
Q  205 ctatctcaaactattaagtctaatagacttgagatcta 242  Q
    |||||||||||||||||| | |||||||||||||||||    
T  180887 ctatctcaaactattaagcccaatagacttgagatcta 180850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 257142 - 257006
Alignment:
Q  59 aacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttct 158  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||    
T  257142 aacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgaaattatccactatagtattcagttggtagaaacttct 257043  T
Q  159 aaccaacactataaggtcttgatcacaccagatcagt 195  Q
    |||||||||||||| ||||||||||||||||||||||    
T  257042 aaccaacactataaagtcttgatcacaccagatcagt 257006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 30821 - 30964
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  30821 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 30918  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    |||||||| || ||||||| ||  | ||||||||||||||||||||    
T  30919 aaacttctgactaacactacaatattttgatcacaccagatcagtc 30964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 10230 - 10089
Alignment:
Q  55 gaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---aga 151  Q
    |||||||||| |||||||||| ||||||||| ||  |||||| ||| |||||||||||  | |||||||||||||| ||||||   |  ||| |   |||    
T  10230 gaataacacatgagagttatcttggttcaccaaacacggcta-ttccagtccccacaccccgtgtgagattatccactatagttgtc--ttgctaacaga 10134  T
Q  152 aacttctaaccaacactataaggtcttgatcacaccagatcagtc 196  Q
    ||||||| || | ||||||||||||| ||||||||||||||||||    
T  10133 aacttctgactagcactataaggtctagatcacaccagatcagtc 10089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 94429 - 94573
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  94429 agaataacacaggagagttatcctggttcactaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 94526  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  94527 aaacttctgactagcactacaatttcttgatcacaccagatcagtcc 94573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 103870 - 104014
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggt---ag 150  Q
    |||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||| || |||||||||||||| |||||| | |  ||| |   ||    
T  103870 agaataacacaggagagttatcctggttcaccaaacccggctaattccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 103967  T
Q  151 aaacttctaaccaacactataaggtcttgatcacaccagatcagtcc 197  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||    
T  103968 aaacttctgactagcactacaatttcttgatcacaccagatcagtcc 104014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 408518 - 408435
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    |||||||||||||||||||||||||||||||| || ||| ||||||| ||||||||||| || |||||||||||||| ||||||    
T  408518 agaataacacaggagagttatcctggttcaccaaacccgtctacttccagtccccacacctcgtgtgagattatccactatagt 408435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 3723 - 3640
Alignment:
Q  54 agaataacacaggagagttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagt 137  Q
    |||||||||||||||| |||| |||||||||| || ||||||||||| ||||||||||| || |||||||||||||| ||||||    
T  3723 agaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagt 3640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 14830 - 14954
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || |||||||| || |||||||||||| | |||||||||||||| |||||||| | | |   |||||||||| |  | ||||||    
T  14830 ttatcctggttcgcctaa-ccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactat 14928  T
Q  171 aaggtcttgatcacaccagatcagtc 196  Q
    ||  | ||||||||||||||||||||    
T  14929 aatatgttgatcacaccagatcagtc 14954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 24762 - 24637
Alignment:
Q  71 ttatcctggttcacccaagccggctacttctagtccccacacttcttgtgagattatccattatagtatacagttggtagaaacttctaaccaacactat 170  Q
    |||||||||||| || || || ||||| || |||||||||||| | |||||||||||||| |||||||| | | |   |||||||||| |  | ||||||    
T  24762 ttatcctggttcgcctaa-ccagctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactat 24664  T
Q  171 aaggtcttgatcacaccagatcagtcc 197  Q
    ||  | |||||||||||||||||||||    
T  24663 aatatgttgatcacaccagatcagtcc 24637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 193
Target Start/End: Original strand, 27078 - 27194
Alignment:
Q  81 tcacccaagccggctacttctagtccccacacttcttgtgagattatccat----tatagtatacagttggtagaaacttctaaccaacactataaggtc 176  Q
    ||||| ||| |||||||||| |||||||| ||||| |||||||||||||||    |||||||| ||  |   |||||||||| |  ||||||||| | ||    
T  27078 tcaccaaagtcggctacttccagtccccatacttcgtgtgagattatccatccactatagtatccaactatcagaaacttcttaataacactatatgttc 27177  T
Q  177 ttgatcacaccagatca 193  Q
    |||||||||| ||||||    
T  27178 ttgatcacactagatca 27194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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