View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
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Alignment Overview
Query: NF0647_low_56 (Length: 225)
Name: NF0647_low_56
Description: NF0647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
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Alignment Details
Target: chr3 (Bit Score: 171; Significance: 5e-92; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 49392863 - 49393073
Alignment:
| Q | 1 | ggtttgcacaccccaaagtccagccccagaaacattgttacagttgatgtcttcctctatcatgcttattataggcctaataaaaaattatagcccagta | 100 | Q |
| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||
| T | 49392863 | ggtttgcacactccagagtccagccccagaaacattgttacagttgatgtcttcctctatcatgcttattatgggcctaaaaaaaaattatagcccagta | 49392962 | T |
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| Q | 101 | gtactactaagtact-acccactactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgt | 199 | Q |
| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||
| T | 49392963 | gtactactaagtactgccccactcctccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattaggtcctcttacttttggtgt | 49393062 | T |
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| Q | 200 | taggtgagtat | 210 | Q |
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| T | 49393063 | taggtgagtat | 49393073 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 8420179 - 8420303
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc-actactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgg | 180 | Q |
| |||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||| ||||||||| |||||||| |||||||| |||||||||||| | ||||
| T | 8420179 | aaaaaattatagcccaataggactactaagtactaccccactactctccaggtttccactttccttttctgttgtcttattttaggcatattagaattgg | 8420278 | T |
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| Q | 181 | gtcatcttacttttggtgttaggtg | 205 | Q |
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| T | 8420279 | gttctcttgcttttggtgttaggtg | 8420303 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 789791 - 789916
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtacta-cccactactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgg | 180 | Q |
| |||||||||||| |||| |||||||||||||||| |||| ||||||| | |||||||| ||||||||| ||||||||||||||||||| |||||||||| | ||||
| T | 789791 | aaaaaattataggtcagtcgtactactaagtactatcccattactccc-acgtttccactttccttttcggttgtcttgttttaggcct-ttagaattgg | 789888 | T |
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| Q | 181 | gtcatcttacttttggtgttaggtgagt | 208 | Q |
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| T | 789889 | gtcctcttactttttgtgttagatgagt | 789916 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 52374571 - 52374635
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| | ||||
| T | 52374571 | ttccttttctgttgtcttgttttaggcctattagaattgagtcctcttgcttttggtgttaggtg | 52374635 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 29598031 - 29598085
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | ||||
| T | 29598031 | gttgtcttgttttaggcctattagaattaggtcatcttgcttttggtgttaggtg | 29598085 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 54575032 - 54574956
Alignment:
| Q | 129 | caggtttccacattccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||| || |||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||| | ||||
| T | 54575032 | caggtttctactttccttttttgttgttttgttttaggcatattagaattgagtcatcttacttttgttgttaggtg | 54574956 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 28689552 - 28689489
Alignment:
| Q | 142 | tccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||| ||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||| | ||||
| T | 28689552 | tcctcttctgttgtcttgttttaagcctattagaattggatcatcttgcttttggtgttaggtg | 28689489 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 42453335 - 42453386
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttag | 202 | Q |
| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||||
| T | 42453335 | gttgtcttgttttaggcctattagaattgagtcctcttacttttggtgttag | 42453386 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 26279464 - 26279517
Alignment:
| Q | 152 | ttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||||||||||| ||||||||||| || |||||||||||||||| | ||||
| T | 26279464 | ttgtcttgttttaggcctattaaaattgggtcatgttgcttttggtgttaggtg | 26279517 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 36179705 - 36179629
Alignment:
| Q | 129 | caggtttccacattccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||| | |||||||| ||||||||||||| |||||||||||||||| || |||| |||||||||| ||||| | ||||
| T | 36179705 | caggtttccgctttccttttatgttgtcttgttttcggcctattagaattggatcctcttgcttttggtgtcaggtg | 36179629 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 44708433 - 44708478
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| ||||||||| |||||||||||||||| | ||||
| T | 44708433 | ttttaggcctattagaattaggtcatcttgcttttggtgttaggtg | 44708478 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 43207387 - 43207342
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 43207387 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 43207342 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 53507034 - 53506989
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 53507034 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 53506989 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 54407307 - 54407262
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 54407307 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 54407262 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 52973300 - 52973372
Alignment:
| Q | 133 | tttccacattccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||| || ||||| ||| ||||||||||||||| ||| |||| |||| |||||||||| |||||||||| | ||||
| T | 52973300 | tttccacttttcttttttgttatcttgttttaggcctgttaaaatttggtcttcttactttttgtgttaggtg | 52973372 | T |
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Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 34290786 - 34290741
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| ||||||||||||||| | ||||
| T | 34290786 | ttttaggcctattagaattaggtcctcttgtttttggtgttaggtg | 34290741 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 26279306 - 26279346
Alignment:
| Q | 77 | ctaataaaaaattatagcccagtagtactactaagtactac | 117 | Q |
| |||| ||||||||||||| ||||||||||||||| |||||| | ||||
| T | 26279306 | ctaaaaaaaaattatagctcagtagtactactaaatactac | 26279346 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 49392846 - 49392818
Alignment:
| Q | 41 | cagttgatgtcttcctctatcatgcttat | 69 | Q |
| ||||||||||||||||||||||||||||| | ||||
| T | 49392846 | cagttgatgtcttcctctatcatgcttat | 49392818 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 17800473 - 17800349
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtacta-cccactactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgg | 180 | Q |
| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| | ||||
| T | 17800473 | aaaaaattatagataagtagtactattaagtactatcccactactccccaggtttccactttccttttctgttgtcttgttttaggcctattagaattgg | 17800374 | T |
| ||||
| Q | 181 | gtcatcttacttttggtgttaggtg | 205 | Q |
| ||| |||| |||||||||||||||| | ||||
| T | 17800373 | gtcctcttgcttttggtgttaggtg | 17800349 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 27237605 - 27237548
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||
| T | 27237605 | gttgtcttgttttaggcctattagaattgggtcatcttgcttatggtgttaggtgagt | 27237548 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 26917874 - 26917807
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||| ||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| | ||||
| T | 26917874 | ttcctcttctgttgtcttgttttaggcttattagaattgggtcttcttgcttttggtgttaggtgagt | 26917807 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 38971176 - 38971243
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactacc-cactactccccaggtttccacattcctttt | 148 | Q |
| |||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| | ||||
| T | 38971176 | aaaaaaatatagcccagtaatactactaagtactacctcactactccccaggtttccactttcctttt | 38971243 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 23020664 - 23020611
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggt | 204 | Q |
| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||||
| T | 23020664 | gttgtcttgttttagacctattagaattgggtcatattacttttggtgttaggt | 23020611 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 23858983 - 23859047
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||| | ||||
| T | 23858983 | ttcctcttccgttatcttgttttaggcctattagaattgggtcctcttgcatttggtgttaggtg | 23859047 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 7398371 - 7398421
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgtta | 201 | Q |
| ||||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||
| T | 7398371 | gttgtcttgttttaggcctattagaattgggtcctcttgcttttggtgtta | 7398421 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 9022004 - 9021962
Alignment:
| Q | 77 | ctaataaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| |||| |||||||||||||||||||||||||||||||||||||| | ||||
| T | 9022004 | ctaaaaaaaaattatagcccagtagtactactaagtactaccc | 9021962 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 12419679 - 12419618
Alignment:
| Q | 151 | gttgtcttgttttaggcctatta--gaattgggtcatcttacttttggtgttaggtgagtat | 210 | Q |
| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| |||| | ||||
| T | 12419679 | gttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtat | 12419618 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 20091430 - 20091385
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| ||||||||||||||||||||| | ||||
| T | 20091430 | ttttaggcctattagaattaggtcctcttacttttggtgttaggtg | 20091385 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 7398215 - 7398260
Alignment:
| Q | 74 | ggcctaataaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| ||||||| |||| |||||||||||||||||||||||||||||||| | ||||
| T | 7398215 | ggcctaaataaaatttatagcccagtagtactactaagtactaccc | 7398260 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 23551220 - 23551175
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 23551220 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 23551175 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 25010386 - 25010431
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 25010386 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 25010431 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 26918018 - 26917981
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| ||||||||||||| |||||||||||||||||||||||| | ||||
| T | 26918018 | aaaaaattatagctcagtagtactactaagtactaccc | 26917981 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 38415025 - 38414980
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 38415025 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 38414980 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 48983993 - 48983948
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| ||| ||||||||||||||||||||| | ||||
| T | 48983993 | ttttaggcctattagaattaagtcctcttacttttggtgttaggtg | 48983948 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 19692047 - 19692090
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttagg | 203 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||| | ||||
| T | 19692047 | ttttaggcctattagaattaggtcctcttgcttttggtgttagg | 19692090 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 18201069 - 18201115
Alignment:
| Q | 162 | ttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||| |||||||||||||||| |||| ||||| ||||||||||||| | ||||
| T | 18201069 | ttaggtctattagaattgggtcgtcttgctttttgtgttaggtgagt | 18201115 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 119
Target Start/End: Complemental strand, 36903630 - 36903596
Alignment:
| Q | 85 | aaattatagcccagtagtactactaagtactaccc | 119 | Q |
| ||||||||| ||||||||||||||||||||||||| | ||||
| T | 36903630 | aaattatagtccagtagtactactaagtactaccc | 36903596 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 8239638 - 8239679
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgtta | 201 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||| | ||||
| T | 8239638 | ttttaggcctattagaattaggtcctcttgcttttggtgtta | 8239679 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 24525834 - 24525789
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||| |||||||||| |||| |||| |||||||||||||||| | ||||
| T | 24525834 | ttttaggcatattagaattaggtcctcttgcttttggtgttaggtg | 24525789 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 47985119 - 47985074
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| ||||| |||||||||| | ||||
| T | 47985119 | ttttaggcctattagaattaggtcctcttgctttttgtgttaggtg | 47985074 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 9014962 - 9014930
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtac | 114 | Q |
| |||||||||||||||| |||||||||||||||| | ||||
| T | 9014962 | aaaaaattatagcccaatagtactactaagtac | 9014930 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 79; Significance: 4e-37; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 76 - 205
Target Start/End: Original strand, 11290028 - 11290158
Alignment:
| Q | 76 | cctaataaaaaattatagcccagtagtactactaagtacta-cccactactccccaggtttccacattccttttccgttgtcttgttttaggcctattag | 174 | Q |
| ||||| |||||||||||| | |||||||||||||||||||| |||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||| | ||||
| T | 11290028 | cctaaaaaaaaattatagtcgagtagtactactaagtactatcccacttctccccacgtttccactttccttttctgttgtcttgttttaggcctattag | 11290127 | T |
| ||||
| Q | 175 | aattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||| | || |||||||| ||||||| | ||||
| T | 11290128 | aattgggtcctgttgcttttggtattaggtg | 11290158 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 5973357 - 5973235
Alignment:
| Q | 83 | aaaaattatagcccagtagtactactaagtactaccc-actactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattggg | 181 | Q |
| |||||||||||| |||||||| || |||||||||||| |||| ||| ||||||||||| || |||||| |||||||||||||||| ||||||||||||| | ||||
| T | 5973357 | aaaaattatagctcagtagtattattaagtactaccccactattcctcaggtttccacttttcttttctgttgtcttgttttaggtctattagaattgga | 5973258 | T |
| ||||
| Q | 182 | tcatcttacttttggtgttaggt | 204 | Q |
| ||||||| ||||||||||||||| | ||||
| T | 5973257 | tcatcttgcttttggtgttaggt | 5973235 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 34790115 - 34789991
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc-actactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgg | 180 | Q |
| |||||||||||||||| ||||| ||||||||||| ||| |||||||| |||||| ||| |||||||| ||||||| |||||||| |||||||||||| | ||||
| T | 34790115 | aaaaaattatagcccaatagtagtactaagtactgccccactactccttaggttttcactttccttttatgttgtctaattttaggcatattagaattgg | 34790016 | T |
| ||||
| Q | 181 | gtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||||||||| | ||||
| T | 34790015 | gtcatcttacttttggtgttaggtg | 34789991 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 7944739 - 7944651
Alignment:
| Q | 117 | cccactactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||| |||| |||||||||||||||| | ||||
| T | 7944739 | cccaccactccccaggtttccactttccttttctattgtcttgttttaggcctattaaaattgtgtcctcttgcttttggtgttaggtg | 7944651 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 15167606 - 15167542
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||
| T | 15167606 | ttcctcttctgttgtcttgttttaggcctattagaattgggtcctcttacttttggtgttaggtg | 15167542 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 25561699 - 25561632
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||| ||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||
| T | 25561699 | ttcctattctgttgtcttgttttaggcctattagaattgggtcctcttgcttttggtgttaggtgagt | 25561632 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 15078670 - 15078735
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtga | 206 | Q |
| ||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||
| T | 15078670 | ttcctcttctgttgtcttgttttaggcctgttagaattgggtcctcttacttttggtgttaggtga | 15078735 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 8646120 - 8646174
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| | ||||
| T | 8646120 | gttgtcttgttttaggcctattcgaattaggtcatcttgcttttggtgttaggtg | 8646174 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 41677356 - 41677302
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| | ||||
| T | 41677356 | gttgtcttgttttaggcctattagaatcgggtcctcttgcttttggtgttaggtg | 41677302 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 10917344 - 10917389
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| ||||||||| |||||||||||||||| | ||||
| T | 10917344 | ttttaggcctattagaattaggtcatcttgcttttggtgttaggtg | 10917389 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 8102845 - 8102888
Alignment:
| Q | 162 | ttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||||||||||| |||| |||||||||||||||| | ||||
| T | 8102845 | ttaggcctattagaattgggtcctcttgcttttggtgttaggtg | 8102888 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 34048900 - 34048833
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||| ||| |||||||||| ||||||||||||||| | | ||| |||||||||||||||||||||| | ||||
| T | 34048900 | ttcctcttctgttgtcttgtgctaggcctattagaatcgagccattttacttttggtgttaggtgagt | 34048833 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 23606779 - 23606734
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 23606779 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 23606734 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 23798411 - 23798366
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 23798411 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 23798366 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 34049043 - 34049006
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| |||||||||||||||||||| ||||||||||||||||| | ||||
| T | 34049043 | aaaaaattatagcccagtagaactactaagtactaccc | 34049006 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 42600735 - 42600780
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 42600735 | ttttaggcctattagaattaggtcttcttgcttttggtgttaggtg | 42600780 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 30674559 - 30674507
Alignment:
| Q | 152 | ttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggt | 204 | Q |
| ||||||||||||||| ||||| ||||||||| |||| ||||||||||||||| | ||||
| T | 30674559 | ttgtcttgttttaggtctatttgaattgggttctcttgcttttggtgttaggt | 30674507 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 38009329 - 38009267
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttagg | 203 | Q |
| ||||| ||| |||||||||||||||||||||||||| || || | || |||||||||||||| | ||||
| T | 38009329 | ttcctcttctgttgtcttgttttaggcctattagaactgagttcttttgcttttggtgttagg | 38009267 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 45475770 - 45475815
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| | || |||| |||||||||||||||| | ||||
| T | 45475770 | ttttaggcctattagaattagttcctcttgcttttggtgttaggtg | 45475815 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 39933 - 40057
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactac-ccactactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgg | 180 | Q |
| |||||||||||| | | ||||||||||||||||||| |||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| | ||||
| T | 39933 | aaaaaattatagtctattagtactactaagtactactccactattccccaggtttccactttctttttctgttgtcttgttttaggcctattagaattgg | 40032 | T |
| ||||
| Q | 181 | gtcatcttacttttggtgttaggtg | 205 | Q |
| ||| |||| ||||| |||||||||| | ||||
| T | 40033 | gtcctcttgctttttgtgttaggtg | 40057 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 137993 - 138117
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactac-ccactactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgg | 180 | Q |
| |||||||||||| | | ||||||||||||||||||| |||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| | ||||
| T | 137993 | aaaaaattatagtctattagtactactaagtactactccactattccccaggtttccactttctttttctgttgtcttgttttaggcctattagaattgg | 138092 | T |
| ||||
| Q | 181 | gtcatcttacttttggtgttaggtg | 205 | Q |
| ||| |||| ||||| |||||||||| | ||||
| T | 138093 | gtcctcttgctttttgtgttaggtg | 138117 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 31)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 22077040 - 22077164
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc-actactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgg | 180 | Q |
| ||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||||| || |||||| ||||||| ||||||| ||||||||||||| | ||||
| T | 22077040 | aaaaaattatagcccagtagtgctactaaatactaccccactactcccaaggtttccacttttcttttctgttgtctggttttagacctattagaattga | 22077139 | T |
| ||||
| Q | 181 | gtcatcttacttttggtgttaggtg | 205 | Q |
| ||| || | |||||||||||||||| | ||||
| T | 22077140 | gtcctcatgcttttggtgttaggtg | 22077164 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 30507286 - 30507200
Alignment:
| Q | 119 | cactactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||| | ||||
| T | 30507286 | cactactccccaggtttccactttccttttatgttgtcttgttttaggcctataagaattgagtcctcttgcttttggtgttaggtg | 30507200 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 40217155 - 40217217
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagtatatt | 213 | Q |
| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| | ||||
| T | 40217155 | gttgtcttgttttaggcctattagaattgggtcattttgcttttggtgttaggtgagtatatt | 40217217 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 37746913 - 37746849
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||
| T | 37746913 | ttcctcttctgttgtcttgttttaggcctattagaattgggtcatcttgcttttggtgttaggtg | 37746849 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 36118638 - 36118585
Alignment:
| Q | 152 | ttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| | ||||
| T | 36118638 | ttgtcttcttttaggcctattagaattgggtcatcttgcttttggtgttaggtg | 36118585 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 36178596 - 36178655
Alignment:
| Q | 149 | ccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| |||||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||||| | ||||
| T | 36178596 | ccgttgtcttgttttaggcccattagaatcgggtcctcttgcttttggtgttaggtgagt | 36178655 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 39329583 - 39329524
Alignment:
| Q | 142 | tccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgtta | 201 | Q |
| |||| ||| |||||||||||||||||||||||||||| |||| |||| |||||||||||| | ||||
| T | 39329583 | tcctcttctgttgtcttgttttaggcctattagaatttggtcttcttgcttttggtgtta | 39329524 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 2135496 - 2135447
Alignment:
| Q | 155 | tcttgttttaggcctattagaattgggtcatcttacttttggtgttaggt | 204 | Q |
| ||||||||||||| ||||||||||||||| |||| ||||||||||||||| | ||||
| T | 2135496 | tcttgttttaggcttattagaattgggtcctcttgcttttggtgttaggt | 2135447 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 15735026 - 15735075
Alignment:
| Q | 156 | cttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||| ||||||||||||| |||| |||||||||||||||| | ||||
| T | 15735026 | cttgttttaggcctgttagaattgggtcttcttgcttttggtgttaggtg | 15735075 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 16844979 - 16845024
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| ||||||||| |||||||||||||||| | ||||
| T | 16844979 | ttttaggcctattagaattaggtcatcttgcttttggtgttaggtg | 16845024 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 38352404 - 38352359
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| ||||||||| |||||||||||||||| | ||||
| T | 38352404 | ttttaggcctattagaattaggtcatcttgcttttggtgttaggtg | 38352359 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 29425342 - 29425298
Alignment:
| Q | 164 | aggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||||||||||||||||| ||||||||||| ||||||||||||| | ||||
| T | 29425342 | aggcctattagaattgggttatcttactttttgtgttaggtgagt | 29425298 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 36363062 - 36362998
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||| |||| | ||||
| T | 36363062 | ttcctcttcagttgtcttgttttagacctattagaattgagtcatctcgcttttggtgttgggtg | 36362998 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 16882544 - 16882497
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtgag | 207 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||||| | ||||
| T | 16882544 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtgag | 16882497 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 37777372 - 37777325
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtgag | 207 | Q |
| ||||||||||||||||||| ||||||||| ||||||||||||| |||| | ||||
| T | 37777372 | ttttaggcctattagaattaggtcatcttgcttttggtgttagttgag | 37777325 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 119
Target Start/End: Original strand, 27111803 - 27111845
Alignment:
| Q | 77 | ctaataaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| |||| ||||| |||||||||||||||||||||||||||||||| | ||||
| T | 27111803 | ctaaaaaaaagttatagcccagtagtactactaagtactaccc | 27111845 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 45656101 - 45656147
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggt | 197 | Q |
| ||||||||||||||||||||||||||||| |||||||| ||||||| | ||||
| T | 45656101 | gttgtcttgttttaggcctattagaattgagtcatctttgttttggt | 45656147 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 52468211 - 52468265
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||||||||||||| ||| |||| |||||| |||||||| | ||||
| T | 52468211 | gttgtcttgttttaggcctattagaattgagtcctcttgtttttggcgttaggtg | 52468265 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 4168074 - 4168017
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| | ||||
| T | 4168074 | gttgtcttgttttaggcctattaaaatatagtcatcttggttttggtgttaggtgagt | 4168017 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 19498462 - 19498507
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 19498462 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 19498507 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 32128542 - 32128587
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 32128542 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 32128587 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 34027537 - 34027582
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 34027537 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 34027582 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 35465065 - 35465110
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||||| || |||||||||||||||| | ||||
| T | 35465065 | ttttaggcctattagaattaggtcatgttgcttttggtgttaggtg | 35465110 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 40089474 - 40089519
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 40089474 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 40089519 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 54083391 - 54083347
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggt | 204 | Q |
| ||||||||||||||||||| |||| |||| ||||||||||||||| | ||||
| T | 54083391 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggt | 54083347 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 116
Target Start/End: Complemental strand, 2135651 - 2135617
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtacta | 116 | Q |
| |||||||||||| |||||||||||||||||||||| | ||||
| T | 2135651 | aaaaaattatagtccagtagtactactaagtacta | 2135617 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 4168198 - 4168161
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| ||||||||||| ||||| |||||||||||||||||||| | ||||
| T | 4168198 | aaaaaattatatcccagcagtactactaagtactaccc | 4168161 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 15734868 - 15734905
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| ||||||||||| || ||||||||||||||||||||||| | ||||
| T | 15734868 | aaaaaattataaccaagtagtactactaagtactaccc | 15734905 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 24969395 - 24969440
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| | || |||| |||||||||||||||| | ||||
| T | 24969395 | ttttaggcctattagaattagatcctcttgcttttggtgttaggtg | 24969440 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 36363202 - 36363165
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| |||||||||||| |||||||||||||||||||||||| | ||||
| T | 36363202 | aaaaaattatagttcagtagtactactaagtactaccc | 36363165 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 43455680 - 43455635
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||| ||||| |||| ||||||||| ||||||||||| | ||||
| T | 43455680 | ttttaggcctatttgaattaggtcctcttactttcggtgttaggtg | 43455635 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 66; Significance: 2e-29; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 10407314 - 10407415
Alignment:
| Q | 88 | ttatagcccagtagtactactaagtactaccc-actactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgggtcatc | 186 | Q |
| |||||| ||||||||||||||||||||| ||| |||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| || | ||||
| T | 10407314 | ttatagtccagtagtactactaagtactgccccactacttctcaggtttccactttccttttctgttgtcttgttttaggcctattagaattgggtcctc | 10407413 | T |
| ||||
| Q | 187 | tt | 188 | Q |
| || | ||||
| T | 10407414 | tt | 10407415 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 15639570 - 15639623
Alignment:
| Q | 155 | tcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||
| T | 15639570 | tcttgttttaggcctattagaattgggtcctcttacttttggtgttaggtgagt | 15639623 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 34425823 - 34425880
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| | ||||
| T | 34425823 | gttgtcttgttttaggcctattagaattgagtcctcttgcttttggtgttaggtgagt | 34425880 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 40794505 - 40794452
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggt | 204 | Q |
| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| | ||||
| T | 40794505 | gttgtcttgttttaggcttattagaattgggtcctcttacttttggtgttaggt | 40794452 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 7079534 - 7079605
Alignment:
| Q | 133 | tttccacattccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggt | 204 | Q |
| ||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||| |||||| |||||||| | ||||
| T | 7079534 | tttccactttccttttttgttgtcttgttttagacctattagaattaggtcatcttgcttttgatgttaggt | 7079605 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 2024820 - 2024766
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||| | ||||
| T | 2024820 | gttgtcttgttttaggcatattagaattgagtcctcttgcttttggtgttaggtg | 2024766 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 2024973 - 2024936
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| |||||||||||||||||||||||||||||||||||||| | ||||
| T | 2024973 | aaaaaattatagcccagtagtactactaagtactaccc | 2024936 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 2412009 - 2412061
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttagg | 203 | Q |
| ||||||||||||||||||||||||||||| | ||||||||||||||||||| | ||||
| T | 2412009 | gttgtcttgttttaggcctattagaattgagcactcttacttttggtgttagg | 2412061 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 11242497 - 11242447
Alignment:
| Q | 152 | ttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttag | 202 | Q |
| |||| |||||||| |||||||||||||||||| |||| ||||||||||||| | ||||
| T | 11242497 | ttgttttgttttatgcctattagaattgggtcctcttgcttttggtgttag | 11242447 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 7670877 - 7670922
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 7670877 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 7670922 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 15639225 - 15639262
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| |||||||||||| ||||||||||||||||||||||||| | ||||
| T | 15639225 | aaaaaattatagtccagtagtactactaagtactaccc | 15639262 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 16198941 - 16198896
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 16198941 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 16198896 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 28822489 - 28822444
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 28822489 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 28822444 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 38869510 - 38869465
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 38869510 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 38869465 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 34425674 - 34425711
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| ||||| |||||||||||||||| ||||||||||||||| | ||||
| T | 34425674 | aaaaatttatagcccagtagtattactaagtactaccc | 34425711 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 40389683 - 40389638
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| ||||| |||||||||| | ||||
| T | 40389683 | ttttaggcctattagaattaggtcctcttgcttttagtgttaggtg | 40389638 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 14318558 - 14318510
Alignment:
| Q | 157 | ttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||| || |||||| |||| |||||||| ||||||| | ||||
| T | 14318558 | ttgttttaggcctattaaaactgggtcctcttgcttttggtcttaggtg | 14318510 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 33037704 - 33037752
Alignment:
| Q | 156 | cttgttttaggcctattagaattgggtcatcttacttttggtgttaggt | 204 | Q |
| ||||||||| ||||| ||||||||||| |||| ||||||||||||||| | ||||
| T | 33037704 | cttgttttaagcctagaagaattgggtcctcttgcttttggtgttaggt | 33037752 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 19)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 5533166 - 5533296
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactaccc-actactccccag------gtttccacattccttttccgttgtcttgttttaggcctattag | 174 | Q |
| |||||||||||| |||||| |||||||||||||||||| |||||||| ||| |||| ||| ||| |||||||||||||||||||| ||||||||| | ||||
| T | 5533166 | aaaaaattatagtccagtactactactaagtactaccccactactcctcagtttccagttttcactttctttttccgttgtcttgttttacgcctattag | 5533265 | T |
| ||||
| Q | 175 | aattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||| || |||| |||||| ||||||||| | ||||
| T | 5533266 | aattggatcctcttgcttttgatgttaggtg | 5533296 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 45758364 - 45758473
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactacccac-tactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattgg | 180 | Q |
| |||||||||||| ||||||||||||||||||||||||| | |||||| ||||||| ||| ||||||||| ||||| |||||||||||||| | ||||
| T | 45758364 | aaaaaattatagtccagtagtactactaagtactacccccatactccacaggttttcactttccttttctgttgt-----------cctattagaattgg | 45758452 | T |
| ||||
| Q | 181 | gtcatcttacttttggtgtta | 201 | Q |
| |||||||| |||||||||||| | ||||
| T | 45758453 | gtcatcttgcttttggtgtta | 45758473 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 39134915 - 39134851
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||| | ||||
| T | 39134915 | ttcctcttctgttgtcttgttttaagcctattagaattgggtcctcttgcttttggtgttaggtg | 39134851 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 26803870 - 26803937
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||| ||| ||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||||| | ||||
| T | 26803870 | ttcctcttctgttgtcttgttttagtcctattagaattgagttatcttgcttttggtgttaggtgagt | 26803937 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 1367027 - 1366982
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| ||||||||| |||||||||||||||| | ||||
| T | 1367027 | ttttaggcctattagaattaggtcatcttgcttttggtgttaggtg | 1366982 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 9173172 - 9173127
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| ||||||||||||||||||||| | ||||
| T | 9173172 | ttttaggcctattagaattaggtcctcttacttttggtgttaggtg | 9173127 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 13913631 - 13913586
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| ||||||||| |||||||||||||||| | ||||
| T | 13913631 | ttttaggcctattagaattaggtcatcttgcttttggtgttaggtg | 13913586 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 50146098 - 50146142
Alignment:
| Q | 75 | gcctaataaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| |||||| |||||||||||||||||| ||||||||||||||||||| | ||||
| T | 50146098 | gcctaaaaaaaaattatagcccagtggtactactaagtactaccc | 50146142 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 119
Target Start/End: Complemental strand, 39135057 - 39135022
Alignment:
| Q | 84 | aaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| |||||||||||||||||||||||||||||||||||| | ||||
| T | 39135057 | aaaattatagcccagtagtactactaagtactaccc | 39135022 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 9181154 - 9181109
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 9181154 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 9181109 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 19955681 - 19955726
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 19955681 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 19955726 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 27559601 - 27559646
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||||||| |||||||||||| | ||||
| T | 27559601 | ttttaggcctattagaattaggtcctcttacttatggtgttaggtg | 27559646 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 43235968 - 43235899
Alignment:
| Q | 135 | tccacattccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggt | 204 | Q |
| ||||| ||||||||| |||| |||| |||||||||||||||||| ||| | || ||||||||||||||| | ||||
| T | 43235968 | tccactttccttttctattgttttgtattaggcctattagaattgagtcctattgcttttggtgttaggt | 43235899 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 44895616 - 44895661
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 44895616 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 44895661 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 17168920 - 17168964
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggt | 204 | Q |
| ||||||||||||||||||| |||| |||| ||||||||||||||| | ||||
| T | 17168920 | ttttaggcctattagaattaggtcttcttgcttttggtgttaggt | 17168964 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 38547207 - 38547164
Alignment:
| Q | 162 | ttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||| |||| |||||||||| |||||||||| | ||||
| T | 38547207 | ttaggcctattagaatttggtcctcttacttttagtgttaggtg | 38547164 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 4971767 - 4971722
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| | || |||| |||||||||||||||| | ||||
| T | 4971767 | ttttaggcctattagaattagttcctcttgcttttggtgttaggtg | 4971722 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 23185391 - 23185436
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| | || |||| |||||||||||||||| | ||||
| T | 23185391 | ttttaggcctattagaattagttcctcttgcttttggtgttaggtg | 23185436 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 40501939 - 40501894
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||| ||||||||||| | ||||||| |||||||||||||||| | ||||
| T | 40501939 | ttttaggtctattagaattagatcatcttgcttttggtgttaggtg | 40501894 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 20611713 - 20611770
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||
| T | 20611713 | gttgtcttgttttaggcctattagaattgggtcattttacttttggtgttaggtgagt | 20611770 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 19987117 - 19987162
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| ||||||||| |||||||||||||||| | ||||
| T | 19987117 | ttttaggcctattagaattaggtcatcttgcttttggtgttaggtg | 19987162 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 30121698 - 30121754
Alignment:
| Q | 152 | ttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||||||||||||| |||||||||| ||||| |||| |||||||||||| |||||| | ||||
| T | 30121698 | ttgtcttgttttaggtctattagaatcgggtcctcttgcttttggtgttaagtgagt | 30121754 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 2477920 - 2477878
Alignment:
| Q | 77 | ctaataaaaaattatagcccagtagtactactaagtactaccc | 119 | Q |
| |||| ||||| |||||||||||||||||||||||||||||||| | ||||
| T | 2477920 | ctaaaaaaaagttatagcccagtagtactactaagtactaccc | 2477878 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 116
Target Start/End: Original strand, 4036853 - 4036887
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtacta | 116 | Q |
| ||||||||||||||||||||||||||||||||||| | ||||
| T | 4036853 | aaaaaattatagcccagtagtactactaagtacta | 4036887 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 27788838 - 27788793
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||| |||| ||||||||| |||||||||||||||| | ||||
| T | 27788838 | ttttaggcctattaaaattaggtcatcttgcttttggtgttaggtg | 27788793 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 27131382 - 27131310
Alignment:
| Q | 133 | tttccacattccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||| || || ||| ||||||| ||||||||| ||||||||||| | | ||||||||||| ||||||||| | ||||
| T | 27131382 | tttccacttttctcttctgttgtctagttttaggcttattagaattgagccttcttacttttgctgttaggtg | 27131310 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 4036895 - 4036928
Alignment:
| Q | 175 | aattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| |||||||||||||| ||||||||||||||||||| | ||||
| T | 4036895 | aattgggtcatcttgcttttggtgttaggtgagt | 4036928 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 17353910 - 17353955
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||| ||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 17353910 | ttttaggtctattagaattaggtcctcttgcttttggtgttaggtg | 17353955 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 34397813 - 34397854
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgtta | 201 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||| | ||||
| T | 34397813 | ttttaggcctattagaattaggtcttcttgcttttggtgtta | 34397854 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 235375 - 235335
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgtt | 200 | Q |
| ||||||||||||||||||| |||| |||| ||||||||||| | ||||
| T | 235375 | ttttaggcctattagaattaggtcctcttgcttttggtgtt | 235335 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1320 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1320
Description:
Target: scaffold1320; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 1266 - 1331
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtga | 206 | Q |
| ||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||
| T | 1266 | ttcctcttctgttgtcttgttttaggcctgttagaattgggtcctcttacttttggtgttaggtga | 1331 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 19)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 11912941 - 11912884
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||
| T | 11912941 | gttgtcttgttttaggcctattagaattgggtcatcttgattttggtgttaggtgagt | 11912884 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 38400707 - 38400771
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| | ||||
| T | 38400707 | ttcctgttctgttgtcttgttttaggcctattagaatagggtcatcttgcttttggtgttaggtg | 38400771 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 10252326 - 10252375
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgtt | 200 | Q |
| |||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||
| T | 10252326 | gttgtcttgttttaggcctattagaattgggtcatcttgcttttggtgtt | 10252375 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 37182590 - 37182643
Alignment:
| Q | 152 | ttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||
| T | 37182590 | ttgtcttgttttaggcctattagaattgggtcatcttgcttttgctgttaggtg | 37182643 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 16096686 - 16096746
Alignment:
| Q | 117 | cccactactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaat | 177 | Q |
| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | ||||
| T | 16096686 | cccactactccccaggtttccacattacttttttgttgtcttattttaggcctattagaat | 16096746 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 29694293 - 29694357
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||| ||||||||||||||| ||||||||||||||||| |||| |||||||||||||||| | ||||
| T | 29694293 | ttcctcttctgttgtcttgttttagacctattagaattgggtcctcttgcttttggtgttaggtg | 29694357 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 16227551 - 16227497
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||| | |||||||||||| ||||||||||||||||||||||||| | ||||
| T | 16227551 | gttgtcttgttttatgtctattagaattgagtcatcttacttttggtgttaggtg | 16227497 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 11952799 - 11952732
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtgagt | 208 | Q |
| ||||| |||| |||||||||||||||||||||||||||| ||| |||| ||| |||||||||||||| | ||||
| T | 11952799 | ttcctcttccattgtcttgttttaggcctattagaattgagtcctcttgttttaggtgttaggtgagt | 11952732 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 12134222 - 12134169
Alignment:
| Q | 152 | ttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||||||||||||||||| || |||| |||||||||||||||| | ||||
| T | 12134222 | ttgtcttgttttaggcctattagaattgagttctcttgcttttggtgttaggtg | 12134169 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 27506890 - 27506845
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| ||||||||| |||||||||||||||| | ||||
| T | 27506890 | ttttaggcctattagaattaggtcatcttgcttttggtgttaggtg | 27506845 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 13800737 - 13800674
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||| |||||||||||| ||||||||||||||||| || |||| |||||||||||||||| | ||||
| T | 13800737 | ttcctcttctgttgtcttgttt-aggcctattagaattggatcttcttgcttttggtgttaggtg | 13800674 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 24035738 - 24035674
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||| ||| |||||||||||||||| ||||||||||| |||| |||| ||||| |||||||||| | ||||
| T | 24035738 | ttcctcttctgttgtcttgttttaggtctattagaattaggtcctcttgcttttagtgttaggtg | 24035674 | T |
| ||||
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Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 21665883 - 21665829
Alignment:
| Q | 151 | gttgtcttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||| | |||||||||||||||| |||| |||| ||||||||||| | ||||
| T | 21665883 | gttgtcttgttttatgtctattagaattgggtcctcttgctttaggtgttaggtg | 21665829 | T |
| ||||
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Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 8327618 - 8327663
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| |||||||||||||||| | ||||
| T | 8327618 | ttttaggcctattagaattaggtcctcttgcttttggtgttaggtg | 8327663 | T |
| ||||
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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 117
Target Start/End: Original strand, 29694150 - 29694185
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactac | 117 | Q |
| |||||||||||||||| ||||||||||||||||||| | ||||
| T | 29694150 | aaaaaattatagcccactagtactactaagtactac | 29694185 | T |
| ||||
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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 10252193 - 10252227
Alignment:
| Q | 83 | aaaaattatagcccagtagtactactaagtactac | 117 | Q |
| ||||||||||||| ||||||||||||||||||||| | ||||
| T | 10252193 | aaaaattatagcctagtagtactactaagtactac | 10252227 | T |
| ||||
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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 116
Target Start/End: Complemental strand, 12134364 - 12134330
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtacta | 116 | Q |
| |||||||||||||||| |||||||||||||||||| | ||||
| T | 12134364 | aaaaaattatagcccaatagtactactaagtacta | 12134330 | T |
| ||||
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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 37622512 - 37622474
Alignment:
| Q | 163 | taggcctattagaattgggtcatcttacttttggtgtta | 201 | Q |
| ||||| ||||||||||||||| ||||||||||||||||| | ||||
| T | 37622512 | taggcatattagaattgggtcctcttacttttggtgtta | 37622474 | T |
| ||||
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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 10762715 - 10762670
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||| |||| |||| | |||||||||||||| | ||||
| T | 10762715 | ttttaggcctattagaattaggtcctcttgcatttggtgttaggtg | 10762670 | T |
| ||||
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Target: scaffold0227 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0227
Description:
Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 15926 - 16003
Alignment:
| Q | 129 | caggtttccacattccttttccgttgtcttgttttaggcctattagaa-ttgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||| ||||||||| ||||||||||||||||||||||| || |||| ||||||| |||||| || |||||| | ||||
| T | 15926 | caggtttccactttccttttctgttgtcttgttttaggcctattataatttggatcatcttgcttttgatgctaggtg | 16003 | T |
| ||||
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Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 231036 - 230988
Alignment:
| Q | 157 | ttgttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| ||||||||||||||||||||| ||||| |||| |||||||||||||||| | ||||
| T | 231036 | ttgttttaggcctattagaatcgggtcctcttgcttttggtgttaggtg | 230988 | T |
| ||||
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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 182
Target Start/End: Complemental strand, 351577 - 351479
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactacccactactccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattggg | 181 | Q |
| |||||||||||| |||| | ||||| ||||||||||| |||| ||||||||||| |||||||| |||||||||||||| ||||||| ||||||| | ||||
| T | 351577 | aaaaaattatagtccagcactactattaagtactacca--tacttttcaggtttccactttccttttattttgtcttgttttagacctattaaaattggg | 351480 | T |
| ||||
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Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 350452 - 350355
Alignment:
| Q | 82 | aaaaaattatagcccagtagtactactaagtactacccactactccccaggtttccacattccttttccgttgtctt-gttttaggcctattagaattgg | 180 | Q |
| |||||||||||| | ||||||||||||||||||| | |||| ||||||||||| |||||||| |||||||| ||||||| |||||||||||||| | ||||
| T | 350452 | aaaaaattatagtcatgtagtactactaagtactatca--tacttttcaggtttccactttccttttatgttgtctttgttttagacctattagaattgg | 350355 | T |
| ||||
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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 173703 - 173643
Alignment:
| Q | 141 | ttccttttccgttgtcttgttttaggcctattagaattgggtcatcttacttttggtgtta | 201 | Q |
| ||||| ||| ||||||| ||||||||||||||||||||| | | |||| |||||||||||| | ||||
| T | 173703 | ttcctcttctgttgtctagttttaggcctattagaattgagacctcttgcttttggtgtta | 173643 | T |
| ||||
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Target: scaffold0039 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 106491 - 106536
Alignment:
| Q | 160 | ttttaggcctattagaattgggtcatcttacttttggtgttaggtg | 205 | Q |
| |||||||||||||||| || |||| |||| |||||||||||||||| | ||||
| T | 106491 | ttttaggcctattagatttaggtcctcttgcttttggtgttaggtg | 106536 | T |
| ||||
Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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