View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0648_high_11 (Length: 289)
Name: NF0648_high_11
Description: NF0648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0648_high_11 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 64 - 289
Target Start/End: Original strand, 41766624 - 41766849
Alignment:
| Q |
64 |
tcatcattggattaggagaaggatggatcattgacacagaagatgacggaaatggttggttgaatggaccacttgggggtcgacttgataaccaaagctt |
163 |
Q |
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| T |
41766624 |
tcatcattggattaggagaaggatggatcattgacacagaagatgacggaaatggttggttgaatggaccacttgggggtcgacttgataaccaaagctt |
41766723 |
T |
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| Q |
164 |
aaaacggtaataagcattgccctccccaccaaagagaaaactataagaaggattatcccgttgcttttcacaaatcatggcttcaaattcagggccattt |
263 |
Q |
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| T |
41766724 |
aaaacggtaataagcattgccctccccaccaaagagaaaactataagaaggattatcccgttgcttttcacaaatcatggcttcaaattcagggccattt |
41766823 |
T |
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| Q |
264 |
ttcaccgcatactcaacaagtttgtc |
289 |
Q |
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| T |
41766824 |
ttcaccgcatactcaacaagtttgtc |
41766849 |
T |
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