View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0648_high_20 (Length: 251)

Name: NF0648_high_20
Description: NF0648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0648_high_20
NF0648_high_20
[»] chr3 (15 HSPs)
chr3 (1-235)||(15011697-15011929)
chr3 (1-175)||(12855686-12855860)
chr3 (1-139)||(1989051-1989188)
chr3 (10-240)||(42109364-42109589)
chr3 (1-235)||(24284207-24284436)
chr3 (1-147)||(51300412-51300555)
chr3 (1-119)||(14763880-14763996)
chr3 (1-119)||(23371626-23371742)
chr3 (78-189)||(35984931-35985040)
chr3 (1-147)||(9533077-9533220)
chr3 (78-231)||(14288823-14288973)
chr3 (78-191)||(13036804-13036915)
chr3 (78-187)||(15954776-15954882)
chr3 (3-35)||(12153060-12153092)
chr3 (3-35)||(17512749-17512781)
[»] chr7 (26 HSPs)
chr7 (1-200)||(21518980-21519179)
chr7 (1-235)||(14038826-14039060)
chr7 (1-235)||(14348856-14349090)
chr7 (1-235)||(16668237-16668470)
chr7 (1-235)||(17642607-17642840)
chr7 (1-200)||(15690113-15690312)
chr7 (1-200)||(15697706-15697905)
chr7 (1-156)||(16575222-16575374)
chr7 (1-156)||(16590288-16590440)
chr7 (1-119)||(18872177-18872293)
chr7 (1-119)||(147298-147414)
chr7 (1-119)||(14421582-14421698)
chr7 (1-119)||(14566019-14566135)
chr7 (1-119)||(16008395-16008511)
chr7 (1-119)||(18607093-18607209)
chr7 (81-203)||(19152093-19152213)
chr7 (81-203)||(20751492-20751612)
chr7 (78-231)||(23442434-23442584)
chr7 (78-191)||(16475953-16476063)
chr7 (127-203)||(19145856-19145931)
chr7 (127-203)||(20745255-20745330)
chr7 (81-166)||(14253818-14253902)
chr7 (81-166)||(14265843-14265927)
chr7 (78-121)||(39995605-39995648)
chr7 (85-190)||(12694842-12694944)
chr7 (78-191)||(15142448-15142558)
[»] scaffold0371 (1 HSPs)
scaffold0371 (1-224)||(6793-7015)
[»] scaffold0253 (1 HSPs)
scaffold0253 (2-213)||(5428-5639)
[»] scaffold0192 (2 HSPs)
scaffold0192 (1-235)||(21010-21242)
scaffold0192 (1-235)||(31677-31909)
[»] scaffold1336 (1 HSPs)
scaffold1336 (1-235)||(532-751)
[»] chr1 (15 HSPs)
chr1 (1-233)||(24475564-24475794)
chr1 (1-235)||(25092060-25092294)
chr1 (1-235)||(21986679-21986908)
chr1 (9-235)||(21745377-21745600)
chr1 (1-119)||(16371848-16371964)
chr1 (78-228)||(23195248-23195395)
chr1 (1-119)||(13226940-13227056)
chr1 (1-235)||(21734186-21734416)
chr1 (1-111)||(20438373-20438481)
chr1 (1-155)||(29535128-29535279)
chr1 (85-228)||(5380882-5381022)
chr1 (78-191)||(20086301-20086412)
chr1 (81-191)||(20108328-20108436)
chr1 (84-165)||(41312400-41312480)
chr1 (79-119)||(20901376-20901416)
[»] chr2 (14 HSPs)
chr2 (1-200)||(23148776-23148974)
chr2 (1-200)||(23560566-23560764)
chr2 (47-178)||(22841176-22841307)
chr2 (1-235)||(17634062-17634293)
chr2 (1-119)||(6261298-6261414)
chr2 (1-119)||(19662574-19662690)
chr2 (79-199)||(24669635-24669753)
chr2 (1-119)||(9241560-9241676)
chr2 (82-231)||(25365703-25365847)
chr2 (42-119)||(6482566-6482642)
chr2 (42-119)||(6486033-6486109)
chr2 (78-119)||(30644200-30644241)
chr2 (79-120)||(21903409-21903450)
chr2 (81-189)||(21123693-21123799)
[»] chr4 (12 HSPs)
chr4 (1-235)||(15075536-15075768)
chr4 (1-160)||(15318167-15318324)
chr4 (1-155)||(30146996-30147147)
chr4 (1-119)||(18212365-18212481)
chr4 (78-189)||(14821603-14821712)
chr4 (78-170)||(18261547-18261638)
chr4 (78-170)||(18271512-18271603)
chr4 (78-188)||(15546847-15546954)
chr4 (83-191)||(30238001-30238109)
chr4 (14-59)||(14048460-14048505)
chr4 (3-51)||(14821563-14821610)
chr4 (83-191)||(53905134-53905240)
[»] scaffold0480 (1 HSPs)
scaffold0480 (3-215)||(649-860)
[»] chr8 (14 HSPs)
chr8 (1-235)||(20011892-20012125)
chr8 (1-178)||(15267364-15267541)
chr8 (9-235)||(33089057-33089278)
chr8 (1-161)||(22521637-22521798)
chr8 (9-240)||(25624433-25624659)
chr8 (42-119)||(44476481-44476557)
chr8 (42-119)||(44479743-44479819)
chr8 (86-199)||(22743959-22744069)
chr8 (78-156)||(20005477-20005554)
chr8 (81-191)||(21683508-21683616)
chr8 (81-191)||(21687857-21687965)
chr8 (3-35)||(21683628-21683660)
chr8 (3-35)||(21687977-21688009)
chr8 (3-47)||(22743911-22743954)
[»] chr6 (10 HSPs)
chr6 (1-200)||(18137725-18137925)
chr6 (4-235)||(25772846-25773074)
chr6 (10-235)||(21476464-21476686)
chr6 (10-235)||(21469963-21470185)
chr6 (15-178)||(9185662-9185825)
chr6 (1-119)||(4476675-4476791)
chr6 (1-119)||(23837808-23837924)
chr6 (78-191)||(18315798-18315909)
chr6 (78-191)||(22798338-22798449)
chr6 (79-119)||(23620994-23621034)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-200)||(384336-384534)
[»] chr5 (16 HSPs)
chr5 (1-235)||(17022557-17022788)
chr5 (1-119)||(37599036-37599152)
chr5 (1-119)||(38145504-38145620)
chr5 (1-118)||(22336418-22336533)
chr5 (1-119)||(28371175-28371291)
chr5 (9-119)||(42960401-42960509)
chr5 (1-118)||(22339956-22340071)
chr5 (78-204)||(10035363-10035486)
chr5 (82-177)||(21495115-21495208)
chr5 (42-119)||(19511244-19511320)
chr5 (85-167)||(18819161-18819242)
chr5 (78-156)||(23444035-23444112)
chr5 (78-156)||(21888801-21888878)
chr5 (78-199)||(21901673-21901791)
chr5 (4-35)||(21624782-21624813)
chr5 (3-47)||(21901788-21901831)
[»] scaffold0669 (1 HSPs)
scaffold0669 (1-209)||(1521-1726)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-227)||(92386-92608)
[»] scaffold0395 (2 HSPs)
scaffold0395 (38-200)||(7251-7411)
scaffold0395 (1-40)||(9816-9855)
[»] scaffold0011 (1 HSPs)
scaffold0011 (15-178)||(21497-21660)
[»] scaffold0485 (1 HSPs)
scaffold0485 (1-178)||(2931-3109)
[»] scaffold0069 (2 HSPs)
scaffold0069 (1-178)||(29443-29622)
scaffold0069 (15-178)||(34699-34863)
[»] scaffold0207 (1 HSPs)
scaffold0207 (4-215)||(8837-9045)
[»] scaffold1098 (1 HSPs)
scaffold1098 (78-202)||(2185-2307)
[»] scaffold0026 (4 HSPs)
scaffold0026 (78-202)||(25001-25123)
scaffold0026 (78-202)||(35811-35932)
scaffold0026 (1-119)||(110504-110620)
scaffold0026 (84-189)||(142913-143016)
[»] scaffold0462 (1 HSPs)
scaffold0462 (1-199)||(9043-9236)
[»] scaffold0585 (1 HSPs)
scaffold0585 (53-158)||(8340-8444)
[»] scaffold0104 (1 HSPs)
scaffold0104 (82-227)||(41445-41587)
[»] scaffold0165 (2 HSPs)
scaffold0165 (78-177)||(18146-18243)
scaffold0165 (15-51)||(18117-18153)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-119)||(10092-10208)
[»] scaffold0178 (1 HSPs)
scaffold0178 (82-232)||(25684-25829)
[»] scaffold0790 (1 HSPs)
scaffold0790 (83-189)||(4720-4824)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-119)||(2599-2715)
[»] scaffold2016 (1 HSPs)
scaffold2016 (78-231)||(645-795)
[»] scaffold0003 (2 HSPs)
scaffold0003 (78-189)||(80989-81098)
scaffold0003 (78-178)||(98306-98404)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-199)||(26468-26661)
[»] scaffold0008 (1 HSPs)
scaffold0008 (82-176)||(124763-124855)
[»] scaffold0049 (3 HSPs)
scaffold0049 (78-166)||(53474-53561)
scaffold0049 (78-189)||(42757-42866)
scaffold0049 (3-51)||(42859-42906)
[»] scaffold0180 (1 HSPs)
scaffold0180 (78-191)||(12674-12783)
[»] scaffold0005 (2 HSPs)
scaffold0005 (78-189)||(17997-18106)
scaffold0005 (3-51)||(18099-18146)
[»] scaffold0139 (1 HSPs)
scaffold0139 (86-191)||(2743-2844)
[»] scaffold0053 (2 HSPs)
scaffold0053 (78-199)||(72713-72831)
scaffold0053 (78-156)||(46579-46656)
[»] scaffold0266 (3 HSPs)
scaffold0266 (81-189)||(23245-23351)
scaffold0266 (81-189)||(2166-2272)
scaffold0266 (3-51)||(2122-2170)
[»] scaffold0039 (2 HSPs)
scaffold0039 (78-167)||(3626-3714)
scaffold0039 (3-47)||(3711-3754)
[»] scaffold0007 (1 HSPs)
scaffold0007 (78-191)||(207536-207647)
[»] scaffold0244 (2 HSPs)
scaffold0244 (78-191)||(37-147)
scaffold0244 (78-191)||(13847-13957)
[»] scaffold0261 (2 HSPs)
scaffold0261 (78-170)||(10496-10587)
scaffold0261 (78-170)||(18675-18766)
[»] scaffold0249 (1 HSPs)
scaffold0249 (81-167)||(6623-6708)
[»] scaffold0091 (2 HSPs)
scaffold0091 (78-191)||(22566-22676)
scaffold0091 (78-191)||(26763-26873)
[»] scaffold0117 (1 HSPs)
scaffold0117 (79-120)||(33929-33970)
[»] scaffold0081 (1 HSPs)
scaffold0081 (78-170)||(55775-55864)


Alignment Details
Target: chr3 (Bit Score: 167; Significance: 1e-89; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 15011929 - 15011697
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  15011929 ctactcaacaatgcatatatatgaatatgacttacacctcaacaattcaattaatgatacttcaatctttgaaatgaaattcaacaacatgtataattta 15011830  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    ||||  ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  15011829 tttaagtataaatatacataa-cagccatcaacgattcatcataattaattcaacagctccag-aaaataacacaattaattataatcatggtcctacac 15011732  T
Q  201 caaagttaaatcaactctattcaattacgtagcaa 235  Q
    |||||||||||||||  ||||||| ||| ||||||    
T  15011731 caaagttaaatcaacagtattcaaatacatagcaa 15011697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 12855860 - 12855686
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaaca-attcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattt 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||||| || ||||| ||||||||||||| ||||||||||||| |||||| |||    
T  12855860 ctactcaacaatgcatatatatgaatatgacttactccacaacatagtcaaccaaggatacatcaacctttgaaatgaaattcaacaacttgtatagttt 12855761  T
Q  100 atttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacaca 175  Q
    ||||| ||||||||||||| || || | ||||||||||||||| | |||||| ||||||||| | |||||| ||||    
T  12855760 atttaaatataaatatacacaa-catcaatcaacaattcatcaaacttaatttaacagctccggtaaaatagcaca 12855686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 1989188 - 1989051
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||| |||||||| | |||||||||||||  ||||||||    
T  1989188 ctactcaacaatgcatatatgtgaatatgacttacacctcaacaattcaattaatgatacttcaatctttgaaatggaattcaacaacatacataattta 1989089  T
Q  101 tttagatataaatatacataatcagccatcaacaattca 139  Q
     ||| ||||||||||||||||||||||||||| ||||||    
T  1989088 gtta-atataaatatacataatcagccatcaataattca 1989051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 42109364 - 42109589
Alignment:
Q  10 aatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatat 109  Q
    ||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  42109364 aatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcaacaacatgtataatttatttaaatat 42109461  T
Q  110 aaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacaccaaagttaa 209  Q
    |||||||||| | |||||| ||| || |||||||||||||| |||||  ||||||||||| |||||||| || ||||||||| ||||||| | || || |    
T  42109462 aaatatacatta-cagccagcaataactcatcataattaatccaacaattccagaaaaat-acacaattaatcataatcatgctcctacatctaa-ttca 42109558  T
Q  210 atcaactctattcaattacgtagcaacagct 240  Q
     |||||  |||||||||||||| ||||||||    
T  42109559 ttcaacattattcaattacgtatcaacagct 42109589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 24284436 - 24284207
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  24284436 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatactccaacctttgaaaagaa-ttcaacaacatgtataattta 24284339  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||| |||||||||||||| | ||| || ||| ||| ||||||||||||| |||||  ||||||||||| || ||||| || ||||||||| |||||||     
T  24284338 tttaaatataaatatacatca-cagtcaacaataatccatcataattaatccaacaattccagaaaaat-actcaattaatcataatcatgctcctacat 24284241  T
Q  201 caaagttaaatcaactctattcaattacgtagcaa 235  Q
    | ||||| | |||||  ||||||||| ||||||||    
T  24284240 c-aagttcattcaacattattcaattgcgtagcaa 24284207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 51300412 - 51300555
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  51300412 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 51300509  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataatt 147  Q
    |||| |||||||||||||| | ||| || ||| ||||||||||||||    
T  51300510 tttaaatataaatatacatca-cagtcaacaataattcatcataatt 51300555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 14763996 - 14763880
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  14763996 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 14763899  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  14763898 tttaaatataaatatacat 14763880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 23371742 - 23371626
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  23371742 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 23371645  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  23371644 tttaaatataaatatacat 23371626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 35984931 - 35985040
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||||||| |||||||| ||||||||||||||||  |||||| | ||| ||||||||| |||||||||||||||||| |||||||| ||||||| |||||    
T  35984931 aattcaacgacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcataattaattcaatagctccag-aaaataatacaat 35985028  T
Q  178 tgattataatca 189  Q
    | ||||||||||    
T  35985029 taattataatca 35985040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 9533077 - 9533220
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||| ||||||| || | ||||||||||||||||    
T  9533077 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttaaaaagaattt-agcaacatgtataattta 9533174  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataatt 147  Q
    |||| |||||||||||||| | ||| || ||||||| ||||||||||    
T  9533175 tttaaatataaatatacatca-cagtcaacaacaatccatcataatt 9533220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 14288973 - 14288823
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||||||| ||||||||||||| ||  |||||| | ||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  14288973 aattcaacaacatgtatgatttatttagatacaagcatacatca-cagtcatcaacaaatcaccataattaattcaatagctccag-aaaataacacaat 14288876  T
Q  178 tgattataatcatggtcctacaccaaagttaaatcaactctattcaattacgta 231  Q
      |||||| ||| | ||||||| | ||||| | |||  ||||||||||||||||    
T  14288875 aaattatattcaagctcctacatc-aagttcattcatttctattcaattacgta 14288823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 13036915 - 13036804
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||  ||||| ||| ||||||| |||||| || || ||||||||| |||||||| ||||| |||||  | ||||||||| |||||||    
T  13036915 aatttaacaacatgtacgatttaattaaatataaacatacattat-agtcatcaacaaatcatcatagttaatccaacaatttcagaaaaat-acacaat 13036818  T
Q  178 tgattataatcatg 191  Q
    |||| |||||||||    
T  13036817 tgatcataatcatg 13036804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 15954882 - 15954776
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||||||| ||||| | | ||||||| |||||| | ||| ||||||||| ||||||||| |||| |||||  ||||||||||| |||||||    
T  15954882 aattcaacaacatgtatgatttaatcaaatataaacatacatca-cagtcatcaacaaatcatcataagtaatccaaca-atccagaaaaat-acacaat 15954786  T
Q  178 tgattataat 187  Q
    | || |||||    
T  15954785 taatcataat 15954776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 12153060 - 12153092
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttac 35  Q
    ||||||||||||||||||||| |||||||||||    
T  12153060 actcaacaatgcatatatatgtatatgacttac 12153092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 17512749 - 17512781
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttac 35  Q
    ||||||||||||||||||||| |||||||||||    
T  17512749 actcaacaatgcatatatatgtatatgacttac 17512781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21519179 - 21518980
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21519179 ctactcaacaatgcatatatatgaatatgacttacaccccaacaattcaactaatgatacttcaacctttgaaatgaaattcaacaacatgtataattta 21519080  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccag-aaaaataacacaattgattataatcatggtcctaca 199  Q
    |||| |||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||| ||| ||||    
T  21519079 tttacatataaatatacatga-cagccatcaacaattcatcatacttaattcaacagctccagtaaaaataacacaattaattataatcattgtcttaca 21518981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 14038826 - 14039060
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||||||||||| |||||||||||    
T  14038826 ctactcaacaatgcatatctatgaatatgacttacaccccaacaattcaattagtgatacttcaacctttgaaatgaaattcaacaacgtgtataattta 14038925  T
Q  101 -tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
     ||||  ||||||||||||||| |||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  14038926 ttttaagtataaatatacataa-cagccatcaacggttcctcataattaattcaatagctccagaaaaataacacaattaattataatcatggtcctaca 14039024  T
Q  200 ccaaagttaaatcaactctattcaattacgtagcaa 235  Q
    ||||||||||||||||  ||||||| ||| ||||||    
T  14039025 ccaaagttaaatcaacagtattcaaatacatagcaa 14039060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 14348856 - 14349090
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||||||||||| |||||||||||    
T  14348856 ctactcaacaatgcatatctatgaatatgacttacaccccaacaattcaattagtgatacttcaacctttgaaatgaaattcaacaacgtgtataattta 14348955  T
Q  101 -tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
     ||||  ||||||||||||||| |||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  14348956 ttttaagtataaatatacataa-cagccatcaacggttcctcataattaattcaatagctccagaaaaataacacaattaattataatcatggtcctaca 14349054  T
Q  200 ccaaagttaaatcaactctattcaattacgtagcaa 235  Q
    ||||||||||||||||  ||||||| ||| ||||||    
T  14349055 ccaaagttaaatcaacagtattcaaatacatagcaa 14349090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 16668470 - 16668237
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||||||||||||||||||||||||||||| | || |||| |||||| |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  16668470 ctactcaacaatgcatatatatgaatatgacttgcacctcaacgattcaattaatgatactccaatctttgaaatgaaattcaacaacatgtatacttta 16668371  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  16668370 tttagatataaatatacataatcagccatcaataattcatcatacataattcaacagctccactaaaataacacaattaattataatcatggtcctacac 16668271  T
Q  201 caaagttaaatcaactctattcaattacgtagcaa 235  Q
    | ||||| ||||||||||||| || ||| ||||||    
T  16668270 c-aagttcaatcaactctatttaaatacatagcaa 16668237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 17642840 - 17642607
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||||||||||||||||||||||||||||| | || |||| |||||| |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  17642840 ctactcaacaatgcatatatatgaatatgacttgcacctcaacgattcaattaatgatactccaatctttgaaatgaaattcaacaacatgtatacttta 17642741  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  17642740 tttagatataaatatacataatcagccatcaataattcatcatacataattcaacagctccactaaaataacacaattaattataatcatggtcctacac 17642641  T
Q  201 caaagttaaatcaactctattcaattacgtagcaa 235  Q
    | ||||| ||||||||||||| || ||| ||||||    
T  17642640 c-aagttcaatcaactctatttaaatacatagcaa 17642607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 15690113 - 15690312
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaaca-attcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattt 99  Q
    |||||||||| |||||||||||||||||||||||| || ||||| | ||| |||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  15690113 ctactcaacagtgcatatatatgaatatgacttacaccacaacagagtcatctaatgatacatcaacctttgaaatgaaattcaacaacttgtataattt 15690212  T
Q  100 atttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| | |||||||||||||| || ||||  || ||||||||    
T  15690213 atttaaatataaatatacataa-cagcaatcaacaattcatcatacttaattcaacagctccggtaaaataacacaattaatcataactattgtcctaca 15690311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 15697706 - 15697905
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaaca-attcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattt 99  Q
    |||||||||| |||||||||||||||||||||||| || ||||| | ||| |||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  15697706 ctactcaacagtgcatatatatgaatatgacttacaccacaacagagtcatctaatgatacatcaacctttgaaatgaaattcaacaacttgtataattt 15697805  T
Q  100 atttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| | |||||||||||||| || ||||  || ||||||||    
T  15697806 atttaaatataaatatacataa-cagcaatcaacaattcatcatacttaattcaacagctccggtaaaataacacaattaatcataactattgtcctaca 15697904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 16575374 - 16575222
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  16575374 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcaacaacatgtataattta 16575277  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaaca 156  Q
    |||| |||||||||||||| | || ||| ||| ||| ||||||||||||| |||||    
T  16575276 tttaaatataaatatacatca-caaccaacaataatccatcataattaatccaaca 16575222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16590288 - 16590440
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  16590288 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcaacaacatgtataattta 16590385  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaaca 156  Q
    |||| |||||||||||||| | || ||| ||| ||| ||||||||||||| |||||    
T  16590386 tttaaatataaatatacatca-caaccaacaataatccatcataattaatccaaca 16590440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 18872177 - 18872293
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  18872177 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 18872274  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  18872275 tttaaatataaatatacat 18872293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 147298 - 147414
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| || |||||||||||||    
T  147298 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcatcatgtataattta 147395  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  147396 tttaaatataaatatacat 147414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 14421582 - 14421698
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| | || |||||||||||||||||||||| |||| ||||||||||||||||    
T  14421582 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaatttataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 14421679  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  14421680 tttaaatataaatatacat 14421698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 14566019 - 14566135
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| |||  ||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  14566019 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaatcaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 14566116  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  14566117 tttaaatataaatatacat 14566135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 16008395 - 16008511
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  16008395 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcaggaacatgtataattta 16008492  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  16008493 tttaaatataaatatacat 16008511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 18607093 - 18607209
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| |||  ||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  18607093 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaataaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 18607190  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  18607191 tttaaatataaatatacat 18607209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 19152093 - 19152213
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattga 180  Q
    |||||||||||||| ||||| ||||||||||| |||||| | ||| ||||| ||| |||||||||||||||||| |||||||| ||||||| |||||| |    
T  19152093 tcaacaacatgtatgatttaattagatataaacatacatca-cagtcatcagcaaatcatcataattaattcaatagctccag-aaaataatacaattaa 19152190  T
Q  181 ttataatcatggtcctacaccaa 203  Q
    ||||||||| | ||||| |||||    
T  19152191 ttataatcaagctcctataccaa 19152213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 20751492 - 20751612
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattga 180  Q
    |||||||||||||| ||||| ||||||||||| |||||| | ||| ||||| ||| |||||||||||||||||| |||||||| ||||||| |||||| |    
T  20751492 tcaacaacatgtatgatttaattagatataaacatacatca-cagtcatcagcaaatcatcataattaattcaatagctccag-aaaataatacaattaa 20751589  T
Q  181 ttataatcatggtcctacaccaa 203  Q
    ||||||||| | ||||| |||||    
T  20751590 ttataatcaagctcctataccaa 20751612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 231
Target Start/End: Original strand, 23442434 - 23442584
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||||||| |||||||| ||||||||||||||||  |||||| | ||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  23442434 aattcaacgacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcaccataattaattcaatagctccag-aaaataacacaat 23442531  T
Q  178 tgattataatcatggtcctacaccaaagttaaatcaactctattcaattacgta 231  Q
      |||||| ||| | ||||||| | ||||| | |||  ||||||||||||||||    
T  23442532 aaattatagtcaagctcctacatc-aagttcattcatttctattcaattacgta 23442584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 16476063 - 16475953
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||||||||||| |||||| | ||| ||||||||| |||||||||||||| |||||  |||||||||   |||||||    
T  16476063 aatttaacaacatgtatgatttaattagatataaacatacatca-cagtcatcaacaaatcatcataattaatccaacaattccagaaaa--tacacaat 16475967  T
Q  178 tgattataatcatg 191  Q
    | || |||||||||    
T  16475966 taatcataatcatg 16475953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 19145856 - 19145931
Alignment:
Q  127 catcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacaccaa 203  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||| |||||| |||||||||| | ||||| |||||    
T  19145856 catcaacaaatcatcataattaattcaatagctccag-aaaataatacaattaattataatcaagctcctataccaa 19145931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 20745255 - 20745330
Alignment:
Q  127 catcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacaccaa 203  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||| |||||| |||||||||| | ||||| |||||    
T  20745255 catcaacaaatcatcataattaattcaatagctccag-aaaataatacaattaattataatcaagctcctataccaa 20745330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 14253902 - 14253818
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaa 166  Q
    ||||||||||||||  || | ||||||||||| |||||| | ||| ||||||| | ||||||||| |||||||| |||||||||||    
T  14253902 tcaacaacatgtatgtttcaattagatataaacatacatca-cagtcatcaaccaatcatcataaataattcaatagctccagaaa 14253818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 14265927 - 14265843
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaa 166  Q
    ||||||||||||||  || | ||||||||||| |||||| | ||| ||||||| | ||||||||| |||||||| |||||||||||    
T  14265927 tcaacaacatgtatgtttcaattagatataaacatacatca-cagtcatcaaccaatcatcataagtaattcaatagctccagaaa 14265843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 121
Target Start/End: Complemental strand, 39995648 - 39995605
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataa 121  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||    
T  39995648 aattcaacaacttgtataatttatttacatacaaatatacataa 39995605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 12694842 - 12694944
Alignment:
Q  85 caacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattat 184  Q
    |||||||||| ||||| ||| || |||| |||||| | ||| ||||||||| |||||||| ||||| |||||  |||||||||   ||||||||||| ||    
T  12694842 caacatgtatgatttaattaaatgtaaacatacatta-cagtcatcaacaaatcatcatagttaatccaacaattccagaaaat--acacaattgatcat 12694938  T
Q  185 aatcat 190  Q
    ||||||    
T  12694939 aatcat 12694944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 15142448 - 15142558
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||| || |||| |||||| | ||| ||||||||| |||||||| ||||| |||||  |||||||||   ||||||     
T  15142448 aatttaacaacatgtatgatttaattaaatgtaaacatacatca-cagtcatcaacaaatcatcatagttaatccaacaattccagaaaa--tacacaaa 15142544  T
Q  178 tgattataatcatg 191  Q
    |||| |||||||||    
T  15142545 tgatcataatcatg 15142558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 7015 - 6793
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7015 ctactcaacaatgcatatatatgaatatgacttacacctcaacaattcaactaatgatacttcaacctttgaaatgaaattcaacaacatgtataattta 6916  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    ||||  ||||||||||||||| || |||||||| |||||||||| |||||||||||||||||| ||||||  |||||| ||||||||||||||| |||||    
T  6915 tttaagtataaatatacataa-caaccatcaacgattcatcatacttaattcaacagctccagtaaaatattacaattaattataatcatggtcttacac 6817  T
Q  201 caaagttaaatcaactctattcaa 224  Q
    ||||||| |||||||  |||||||    
T  6816 caaagttcaatcaaccgtattcaa 6793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 5428 - 5639
Alignment:
Q  2 tactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttat 101  Q
    |||||||||||||||||||||||||||||||||| || |||| |||||| |||| ||||  |||  ||||||| ||||||||||||||||||||||||||    
T  5428 tactcaacaatgcatatatatgaatatgacttacacctcaacgattcaattaataatacaccaatatttgaaatgaaattcaacaacatgtataatttat 5527  T
Q  102 ttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacacc 201  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||||||||||||| ||||||||||| | ||||||||    
T  5528 ttagttataaatatacataatcagccatcaataattcatcatacttaattcaacaactccagtaaaataacacaattaattataatcattgccctacacc 5627  T
Q  202 aaagttaaatca 213  Q
    || ||| |||||    
T  5628 aaggttcaatca 5639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 21010 - 21242
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactcc-ccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattt 99  Q
    |||| |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21010 ctacccaacaatgcatatatatgaatatgacttacacctccaacacttcaactaatgatacttcaacctttgaaatgaaattcaacaacatgtataattt 21109  T
Q  100 atttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
    ||||| ||||||||||||| |  ||| ||| ||||||||||| ||  ||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||    
T  21110 atttaaatataaatataca-acacagacat-aacaattcatcgtacataattcaacagctccagtaaaatatcacaattaattataatcgtggtcctaca 21207  T
Q  200 ccaaagttaaatcaactctattcaattacgtagcaa 235  Q
    |||||||| |||||||  ||||||||||| ||||||    
T  21208 ccaaagtt-aatcaacattattcaattacatagcaa 21242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 31677 - 31909
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactcc-ccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattt 99  Q
    ||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31677 ctactcaacaatgcatatatatgaatatgacttacacctccaacacttcaactaatgatacttcaacctttgaaatgaaattcaacaacatgtataattt 31776  T
Q  100 atttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
    ||||| ||||||||||||| |  || |||| ||||||||||| ||  |||||||| ||||| || ||| || ||||||| |||||||||||||| |||||    
T  31777 atttaaatataaatataca-acacatccat-aacaattcatcgtacataattcaatagctcgagtaaagtatcacaattaattataatcatggttctaca 31874  T
Q  200 ccaaagttaaatcaactctattcaattacgtagcaa 235  Q
    |||||||| |||||||  ||||||||||| ||||||    
T  31875 ccaaagtt-aatcaacattattcaattacatagcaa 31909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 751 - 532
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||||||||||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||           
T  751 ctactcaacaatacatatatgtgtatatgacttacaccccaacaattcaactaatgatacttcaacctttgaaaagaa-ttcaacaacatgta------- 660  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
        ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  659 ----gatataaatatacatcat-agccatcaacaattcatcataattaattcaacagctccag-aaaataacacaattaattataatcatggtcctacac 566  T
Q  201 caaagttaaatcaactctattcaattacgtagcaa 235  Q
    ||||||| |||||||  ||||||||||| ||||||    
T  565 caaagtt-aatcaacattattcaattacatagcaa 532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 7e-67; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 24475564 - 24475794
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||||||||||||||||||| |||||||||||||| || ||| ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||    
T  24475564 ctactcaacaatgcatatatgtgaatatgacttacacctcaagaattcaattaatgatactttaatctttgaaatgaaattcaacaacatgtataattta 24475663  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||| |||||||||||||||| || |||||||  |||||||||| |||||||||||||||||  |||||| ||||||| ||||||||||||||| |||||    
T  24475664 ttta-atataaatatacataa-caaccatcaatgattcatcatacttaattcaacagctccaataaaatatcacaattaattataatcatggtcttacac 24475761  T
Q  201 caaagttaaatcaactctattcaattacgtagc 233  Q
     |||||| |||||||| ||||||| ||| ||||    
T  24475762 taaagttcaatcaactgtattcaaatacatagc 24475794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 25092294 - 25092060
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactcc-ccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattt 99  Q
    |||||||||| ||||| |||||||||||||||||| || |||||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  25092294 ctactcaacagtgcatgtatatgaatatgacttacacctccaacacttcaactagtgatacttcaacctttgaaatgtaattcaacaacatgtataattt 25092195  T
Q  100 atttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
    ||||| ||||||||||||| || ||||||||||||||||||||||  ||||||||||||||||| ||||||||||| || ||||||||||| ||||||||    
T  25092194 atttaaatataaatataca-aaacagccatcaacaattcatcatacataattcaacagctccagtaaaataacacagttaattataatcattgtcctaca 25092096  T
Q  200 ccaaagttaaatcaactctattcaattacgtagcaa 235  Q
    | | |||| |  ||||  ||||||||||| ||||||    
T  25092095 caagagtttatccaacagtattcaattacatagcaa 25092060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 21986908 - 21986679
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| || ||||||||||||||||||    
T  21986908 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaattt-aacaacatgtataattta 21986811  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||| |||||||||||||| | |||||| ||| ||| ||||||||||||| |||||  ||||||||||| |||||||| || ||||||||| |||||||     
T  21986810 tttaaatataaatatacatta-cagccagcaataatccatcataattaatccaacaattccagaaaaat-acacaattaatcataatcatgctcctacat 21986713  T
Q  201 caaagttaaatcaactctattcaattacgtagcaa 235  Q
    | || || | |||||  ||||||||||||||||||    
T  21986712 ctaa-ttcattcaacattattcaattacgtagcaa 21986679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 21745600 - 21745377
Alignment:
Q  9 caatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagata 108  Q
    |||||||||||| | |||||||||| | || ||||||| ||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||||| |||    
T  21745600 caatgcatatatgtaaatatgactt-cacctcaacaatccaattaataatacttcaacctttgaaaagaa-ttcaacaacatgtataattcatttaaata 21745503  T
Q  109 taaatatacataatcagccatcaacaattcatcataattaattcaacagctcc-agaaaaataacacaattgattataatcatggtcctacaccaaagtt 207  Q
    ||||||||||| | |||||| ||| ||| |||||| |||||| |||||  ||| |||||||  |||||||| || ||||||||| ||||||| | || ||    
T  21745502 taaatatacatca-cagccaacaataatccatcattattaatccaacaattccaagaaaaaatacacaattaatcataatcatgctcctacatctaa-tt 21745405  T
Q  208 aaatcaactctattcaattacgtagcaa 235  Q
     | |||||  ||||||||||||||||||    
T  21745404 cattcaacattattcaattacgtagcaa 21745377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 16371848 - 16371964
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  16371848 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaattcaattaataatacttcaacctttgaaaagaa-ttcaacaacatgtataattta 16371945  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  16371946 tttaaatataaatatacat 16371964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 228
Target Start/End: Complemental strand, 23195395 - 23195248
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||||||| ||||| ||||||||||  |||||| | ||| ||||||| | |||||||||||||| ||| |||||||||||| |||||||||    
T  23195395 aattcaacaacatgtatgatttaattagatataagcatacatca-cagtcatcaaccaatcatcataattaatccaatagctccagaaaa-taacacaat 23195298  T
Q  178 tgattataatcatggtcctacaccaaagttaaatcaactctattcaattac 228  Q
    | |||||||||||| ||||||||| ||||| | |||||||||  |||||||    
T  23195297 taattataatcatgatcctacacc-aagttcagtcaactctaaacaattac 23195248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 13226940 - 13227056
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  13226940 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 13227037  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  13227038 tttaaatataaatatacat 13227056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 21734416 - 21734186
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||||||  ||||||||||| | |||||||||| | || | ||||| ||| |||| |||| ||||||||||||||||| |||||||||| ||||||||||    
T  21734416 ctactcataaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacctcaacctttgaaaagaa-ttcaacaacaagtataattta 21734319  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||| |||||||||||||| |  | | ||||| ||| ||| ||||||||| ||| |  ||||||||||  || ||||| ||  |||||||| |||||||     
T  21734318 tttaaatataaatatacatcacaaccaatcaataatccataataattaatccaaaaattccagaaaaa-cacgcaattaatcttaatcatgctcctacat 21734220  T
Q  201 caaagttaaatcaactctattcaattacgtagcaa 235  Q
    | ||||| | |||||  ||||||||||||||||||    
T  21734219 c-aagttcattcaacattattcaattacgtagcaa 21734186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 20438481 - 20438373
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  20438481 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcaacaacatgtataattta 20438384  T
Q  101 tttagatataa 111  Q
    |||| ||||||    
T  20438383 tttaaatataa 20438373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 29535128 - 29535279
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||| ||||||||||| |||| ||||| ||||||||||    
T  29535128 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacatttgaaaagaa-ttcagcaacacgtataattta 29535225  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaac 155  Q
    |||| |||||||||||||| | ||| || ||| ||| ||||||||||||| ||||    
T  29535226 tttaaatataaatatacatca-cagtcaacaataatccatcataattaatccaac 29535279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 5380882 - 5381022
Alignment:
Q  85 caacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattat 184  Q
    ||||||| || ||||||||||||||||  |||||| | ||| ||||||||| |||||||||||||||||| |||||||| |||||||||||||  |||||    
T  5380882 caacatgcatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcataattaattcaatagctccag-aaaataacacaataaattat 5380979  T
Q  185 aatcatggtcctacaccaaagttaaatcaactctattcaattac 228  Q
    ||||| | ||||||| | ||||| | |||  |||||||||||||    
T  5380980 aatcaagctcctacatc-aagttcattcatttctattcaattac 5381022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 20086412 - 20086301
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||||||||||| |||||| | | | ||||||||| |||||||||||||| |||||  || |||||||| |||||||    
T  20086412 aatttaacaacatgtatgatttaattagatataaacatacatca-ctgtcatcaacaaatcatcataattaatgcaacaattctagaaaaat-acacaat 20086315  T
Q  178 tgattataatcatg 191  Q
    ||||  ||||||||    
T  20086314 tgatcttaatcatg 20086301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 20108436 - 20108328
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattga 180  Q
    |||||||||||||| ||||| ||||||||||| ||| || | ||| ||||| ||  |||||||||||||| |||||  ||||||||||| |||||||| |    
T  20108436 tcaacaacatgtatgatttaattagatataaacatatatca-cagtcatcagcacatcatcataattaatccaacaattccagaaaaat-acacaattaa 20108339  T
Q  181 ttataatcatg 191  Q
    | | |||||||    
T  20108338 tcacaatcatg 20108328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 41312400 - 41312480
Alignment:
Q  84 acaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaa 165  Q
    ||||||||||| ||||| ||| ||||||| |||||| | ||| |||| |||| |||||||||||||| |||||  |||||||    
T  41312400 acaacatgtatgatttaattaaatataaacatacatca-cagtcatccacaagtcatcataattaatgcaacaattccagaa 41312480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 20901376 - 20901416
Alignment:
Q  79 attcaacaacatgtataatttatttagatataaatatacat 119  Q
    |||||| ||| ||||||||||||||| ||||||||||||||    
T  20901376 attcaaaaacttgtataatttatttaaatataaatatacat 20901416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 23148776 - 23148974
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  23148776 ctactcaacaatgcatatatatgaatatgacttacacctcaacaattcaattaataatactccaacctttgaaatgaaattcaacaacatgtataattta 23148875  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| | |||| ||||||||||| || ||||||    
T  23148876 tttaaatatagatatacataa-cagccatcaacgattcatcataattaattcaacaactccagtaaaataatataattaattataatcattgttctacac 23148974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 23560566 - 23560764
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  23560566 ctactcaacaatgcatatatatgaatatgacttacacctcaacaattcaattaataatactccaacctttgaaatgaaattcaacaacatgtataattta 23560665  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| | |||| ||||||||||| || ||||||    
T  23560666 tttaaatatagatatacataa-cagccatcaacgattcatcataattaattcaacaactccagtaaaataatataattaattataatcattgttctacac 23560764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 22841176 - 22841307
Alignment:
Q  47 tcaactaatgatacttcaacctttgaaaa-gaaattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataa 145  Q
    ||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| |||| |||| ||||||||||||     
T  22841176 tcaactaatgatacaacaacctttgaaaatgaaattcaacaacttgtataatttatttaaatataaatatacataa-cagcaatcagcaattcatcatac 22841274  T
Q  146 ttaattcaacagctccagaaaaataacacaatt 178  Q
    |||||||||||||||| | ||||||||||||||    
T  22841275 ttaattcaacagctccggtaaaataacacaatt 22841307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 17634062 - 17634293
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaatt-caacaacatgtataattt 99  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |  ||||||||||||||||||    
T  17634062 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaattcacaacaacatgtataattt 17634160  T
Q  100 atttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
    ||||| |||||||||||||| | || ||| ||| ||| ||||||||||||| |||||  ||||||||||| |||||||| || ||||||||| |||| ||    
T  17634161 atttaaatataaatatacatca-caaccaacaataatccatcataattaatccaacaattccagaaaaat-acacaattaatcataatcatgctcctgca 17634258  T
Q  200 ccaaagttaaatcaactctattcaattacgtagcaa 235  Q
     | || || | |||||  ||||||||||||||||||    
T  17634259 tctaa-ttcattcaacattattcaattacgtagcaa 17634293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6261414 - 6261298
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  6261414 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 6261317  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  6261316 tttaaatataaatatacat 6261298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 19662690 - 19662574
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  19662690 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 19662593  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  19662592 tttaaatataaatatacat 19662574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 24669753 - 24669635
Alignment:
Q  79 attcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaatt 178  Q
    |||||||||||||||| ||||||||||||||||  |||||| | ||  ||||||||| |||||||||||||||||| |||| ||| ||||||||||||||    
T  24669753 attcaacaacatgtatgatttatttagatataagcatacatca-caatcatcaacaaatcatcataattaattcaatagcttcag-aaaataacacaatt 24669656  T
Q  179 gattataatcatggtcctaca 199  Q
     |||||||||| | |||||||    
T  24669655 aattataatcaagctcctaca 24669635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 9241560 - 9241676
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||| ||| |||| ||||||||||||||||    
T  9241560 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaatgaa-ttcagcaacatgtataattta 9241657  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  9241658 tttaaatataaatatacat 9241676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 25365847 - 25365703
Alignment:
Q  82 caacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgat 181  Q
    ||||||||||||| ||||||||||||||||  |||||| | ||| ||||||||| |||||||||| |||| || |||||||||||| |||||||||| ||    
T  25365847 caacaacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcataat-aatttaatagctccagaaaa-taacacaattaat 25365751  T
Q  182 tataatcatggtcctacaccaaagttaaatcaactctattcaattacgta 231  Q
    |||||||||| |||||| | |||||| |||||||  ||||||| ||||||    
T  25365750 tataatcatgttcctac-ctaaagtt-aatcaacattattcaactacgta 25365703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 6482566 - 6482642
Alignment:
Q  42 acaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaatatacat 119  Q
    ||||| ||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  6482566 acaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataatttatttaaatataaatatacat 6482642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 6486033 - 6486109
Alignment:
Q  42 acaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaatatacat 119  Q
    ||||| ||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  6486033 acaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataatttatttaaatataaatatacat 6486109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 30644241 - 30644200
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacat 119  Q
    |||||| |||||||||||||||||||| ||||||||||||||    
T  30644241 aattcagcaacatgtataatttatttaaatataaatatacat 30644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 21903409 - 21903450
Alignment:
Q  79 attcaacaacatgtataatttatttagatataaatatacata 120  Q
    |||||||||| ||||||||||||||| |||||| ||||||||    
T  21903409 attcaacaacttgtataatttatttaaatataattatacata 21903450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 21123799 - 21123693
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattga 180  Q
    ||||||||||||||  || | | ||||||||| |||||| | ||| ||||| | | ||||||||| |||||||| |||||||| ||| ||| |||||| |    
T  21123799 tcaacaacatgtatgtttcaatcagatataaacatacatca-cagtcatcatccaatcatcataaataattcaatagctccag-aaagtaatacaattaa 21123702  T
Q  181 ttataatca 189  Q
    |||||||||    
T  21123701 ttataatca 21123693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 15075536 - 15075768
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||||||||||||||||||| |||||| ||||||| || ||||||||||| || ||||||||||| ||||||||  ||||||||||||| ||||||||||    
T  15075536 ctactcaacaatgcatatatgtgaataggacttacacctcaacaattcaattagtgatacttcaatctttgaaataaaattcaacaacaagtataattta 15075635  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||| |||||||||| ||||| || ||||||| ||||||||||| ||||||||||||||| || |||| |||| |||| |||||||||||||| ||||||    
T  15075636 ttta-atataaatatgcataa-caaccatcaataattcatcatacttaattcaacagctctagtaaaacaacataattaattataatcatggttctacac 15075733  T
Q  201 caaagttaaatcaactctattcaattacgtagcaa 235  Q
    ||||||| |||||||||||||||| ||| ||||||    
T  15075734 caaagttcaatcaactctattcaaatacatagcaa 15075768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 15318167 - 15318324
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaaca-attcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattt 99  Q
    |||||||||||||||||||| |  |||||||||||||| ||||| | ||||| || ||||| ||||||||||||| ||||||||||||| |||||| |||    
T  15318167 ctactcaacaatgcatatatgt--atatgacttactccacaacatagtcaaccaaggatacatcaacctttgaaatgaaattcaacaacttgtatagttt 15318264  T
Q  100 atttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctc 160  Q
    ||||| ||||||||||||| || |||| ||||||||||||||||| |||||| ||||||||    
T  15318265 atttaaatataaatatacacaa-cagcaatcaacaattcatcatacttaatttaacagctc 15318324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 30146996 - 30147147
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  30146996 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 30147093  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaac 155  Q
    |||| |||||||||||||| | ||| || ||| ||| ||||||||||||| ||||    
T  30147094 tttaaatataaatatacatca-cagtcaacaataatccatcataattaatccaac 30147147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 18212365 - 18212481
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||| ||||||||||||    
T  18212365 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaagatgtataattta 18212462  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  18212463 tttaaatataaatatacat 18212481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 14821603 - 14821712
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||||||||||| |||| ||||| ||||||||||| |||||| | ||| ||||| ||| |||||||||||  | |||||||||||| ||||||| |||||    
T  14821603 aattcaacaacacgtatgatttaattagatataaacatacatca-cagtcatcagcaaatcatcataattggtccaacagctccag-aaaataatacaat 14821700  T
Q  178 tgattataatca 189  Q
    | ||||||||||    
T  14821701 taattataatca 14821712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 18261547 - 18261638
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaata 170  Q
    |||| |||||||||||| ||||||||| ||||||| |||||| | ||| ||||||||||||||||||| |||| ||||||  | |||||||||    
T  18261547 aattaaacaacatgtatgatttatttaaatataaacatacatca-cagtcatcaacaattcatcataagtaatccaacagtcctagaaaaata 18261638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 18271512 - 18271603
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaata 170  Q
    |||| |||||||||||| ||||||||| ||||||| |||||| | ||| ||||||||||||||||||| |||| ||||||  | |||||||||    
T  18271512 aattaaacaacatgtatgatttatttaaatataaacatacatca-cagtcatcaacaattcatcataagtaatccaacagtcctagaaaaata 18271603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 15546847 - 15546954
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||| ||||||| |||||| | ||| |||||||||||||||||| ||||| |||||  |||||||||   |||||||    
T  15546847 aattaaacaacatgtatgatttaattaaatataaacatacatca-cagtcatcaacaattcatcatagttaatccaacaaatccagaaaa--tacacaat 15546943  T
Q  178 tgattataatc 188  Q
    |||| ||||||    
T  15546944 tgatcataatc 15546954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 30238001 - 30238109
Alignment:
Q  83 aacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaata-acacaattgat 181  Q
    |||||||||||| ||||| ||| ||||||| |||||| | || |||||||||| ||||||||| |||| |||||   ||||||||| | |||||||| ||    
T  30238001 aacaacatgtatgatttaattaaatataaacatacatca-caaccatcaacaaatcatcataagtaatccaacaatcccagaaaaaaatacacaattaat 30238099  T
Q  182 tataatcatg 191  Q
     |||||||||    
T  30238100 cataatcatg 30238109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 14048460 - 14048505
Alignment:
Q  14 catatatatgaatatgacttactccccaacaattcaactaatgata 59  Q
    |||||||||||||||||||||| || ||| ||| ||||||||||||    
T  14048460 catatatatgaatatgacttacaccacaataatacaactaatgata 14048505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 14821563 - 14821610
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttactccccaacaattcaac 51  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||||||    
T  14821563 actcaacaatgaatatatat-aatatgacttacaacccaacaattcaac 14821610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 53905240 - 53905134
Alignment:
Q  83 aacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgatt 182  Q
    |||||||||||| |||||||||  |||||| |||||| | ||| ||||||||  |||| ||||| ||| |||||  |||||||||||  ||||||| ||     
T  53905240 aacaacatgtatgatttatttaattataaacatacatca-cagtcatcaacatatcattataatcaatccaacaattccagaaaaat-gcacaattaatc 53905143  T
Q  183 ataatcatg 191  Q
    |||||||||    
T  53905142 ataatcatg 53905134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 649 - 860
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatt 102  Q
    |||||||| ||||||||| |||||||||||||| |  ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  649 actcaacattgcatatatgtgaatatgacttacacgtcaacaattcaattaatgatacttcaatctttgaaatgaaattcaacaacatgtataatttatt 748  T
Q  103 tagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacacca 202  Q
    || |||||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| ||||||||| |||| ||||||||| | ||||||||| |    
T  749 taaatataaatatacataa-cagccatctacaattcatcatacttaattcaacaactccagtaaaataacataattaattataatcgttgtcctacacaa 847  T
Q  203 aagttaaatcaac 215  Q
     |||| |||||||    
T  848 gagttcaatcaac 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 20012125 - 20011892
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | ||||| |||||| || ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  20012125 ctactcatcaatgcatatatgtaaatataacttacacctcaacaattcaattaatgatacttcaacctttgaaaag-aatttaacaacatgtataattta 20012027  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctcc--agaaaaataacacaattgattataatcatggtcctac 198  Q
    |||| |||||||||||||| | || ||||||||||||||||||||| ||||||||| ||||  | |||||||| |||||| |||||||||||| ||||||    
T  20012026 tttaaatataaatatacatca-caaccatcaacaattcatcataatgaattcaacaactccaaaaaaaaataatacaattaattataatcatgatcctac 20011928  T
Q  199 accaaagttaaatcaactctattcaattacgtagcaa 235  Q
    ||||||||| |||||||  ||||||||||| ||||||    
T  20011927 accaaagtt-aatcaacattattcaattacatagcaa 20011892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 15267364 - 15267541
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaaca-attcaactaatgatacttcaacctttgaaaa-gaaattcaacaacatgtataatt 98  Q
    ||||| ||||||||||| ||||||||||||||||| || ||||| | ||||||||||||||  ||||||||||||| ||||||||||||| |||||||||    
T  15267364 ctactgaacaatgcatacatatgaatatgacttac-cctcaacatagtcaactaatgatacaacaacctttgaaaatgaaattcaacaacttgtataatt 15267462  T
Q  99 tatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaatt 178  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  15267463 tatttaaatataaatatacataa-cagcaatcaacaattcatcatacttaattcaacagctccggtaaaataacacaatt 15267541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 33089057 - 33089278
Alignment:
Q  9 caatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagata 108  Q
    |||||||||||| | |||||||||| | || | ||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  33089057 caatgcatatatgtaaatatgactt-cacctcgacaattcaattaataatacttcaacctttgaaaagaa-ttcaacaacatgtataatttatttaaata 33089154  T
Q  109 taaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacaccaaagtta 208  Q
    ||||||||||| | |||||||||| ||| ||||||||||||| |||||  ||||||||||| |||||||| || ||||||||| ||||||| | || ||     
T  33089155 taaatatacatca-cagccatcaataatccatcataattaatccaacatttccagaaaaat-acacaattaatcataatcatgctcctacatctaa-ttc 33089251  T
Q  209 aatcaactctattcaattacgtagcaa 235  Q
    | |||||  ||||||||||||||||||    
T  33089252 attcaacattattcaattacgtagcaa 33089278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22521798 - 22521637
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaaca-attcaactaatgatacttcaacctttgaaaa-gaaattcaacaacatgtataatt 98  Q
    ||||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||  |||||||| |||| ||||||||||||| |||||||||    
T  22521798 ctactcaacaatgcatatatatgaatatgacttacacctcaacatagtcaactaatgatacaacaacctttaaaaatgaaattcaacaacttgtataatt 22521699  T
Q  99 tatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctcc 161  Q
    |||||| |||||| ||||||||| |||| ||||||||||||||||| ||||||||| ||||||    
T  22521698 tatttaaatataattatacataa-cagcaatcaacaattcatcatacttaattcaatagctcc 22521637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 25624659 - 25624433
Alignment:
Q  9 caatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagata 108  Q
    |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  25624659 caatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagag-ttcaacaacatgtataatttatttaaata 25624562  T
Q  109 taaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacaccaaagtta 208  Q
    ||||||||||| | |||||| ||| ||| ||||||||||||| | |||  ||||  || || ||| |||| || ||||||||| ||||||| | || ||     
T  25624561 taaatatacatca-cagccagcaataatccatcataattaatccgacaattccatgaagat-acataattaatcataatcatgctcctacatctaa-ttc 25624465  T
Q  209 aatcaactctattcaattacgtagcaacagct 240  Q
    | |||||  ||||| |||||||||||||||||    
T  25624464 attcaacattattcgattacgtagcaacagct 25624433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 44476481 - 44476557
Alignment:
Q  42 acaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaatatacat 119  Q
    ||||| ||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  44476481 acaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataatttatttaaatataaatatacat 44476557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 44479743 - 44479819
Alignment:
Q  42 acaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaatatacat 119  Q
    ||||| ||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  44479743 acaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataatttatttaaatataaatatacat 44479819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 22743959 - 22744069
Alignment:
Q  86 aacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattata 185  Q
    ||||||||| ||||| ||||||||||| |||||| | ||| ||||||||| |||||||||||||| |||||  |||||||||   |||||||| || |||    
T  22743959 aacatgtatgatttaattagatataaacatacatca-cagtcatcaacaaatcatcataattaatccaacaattccagaaaa--tacacaattaatcata 22744055  T
Q  186 atcatggtcctaca 199  Q
    |||||| |||||||    
T  22744056 atcatgctcctaca 22744069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 20005554 - 20005477
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaaca 156  Q
    |||| |||||||||||| ||||| ||| ||||||| |||||| || || | ||||||| |||||||||||||| |||||    
T  20005554 aatttaacaacatgtatgatttaattaaatataaacatacatcat-agtcgtcaacaagtcatcataattaatccaaca 20005477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 21683616 - 21683508
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattga 180  Q
    |||||||||||||| ||||||||| ||||||| |||||| | ||| || |||||  |||| ||||| ||| |||||  |||||||||||  ||||||| |    
T  21683616 tcaacaacatgtatgatttatttaaatataaacatacatca-cagtcaacaacaggtcattataatcaatccaacaattccagaaaaat-gcacaattaa 21683519  T
Q  181 ttataatcatg 191  Q
    | |||||||||    
T  21683518 tcataatcatg 21683508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 21687965 - 21687857
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattga 180  Q
    |||||||||||||| ||||||||| ||||||| |||||| | ||| || |||||  |||| ||||| ||| |||||  |||||||||||  ||||||| |    
T  21687965 tcaacaacatgtatgatttatttaaatataaacatacatca-cagtcaacaacaggtcattataatcaatccaacaattccagaaaaat-gcacaattaa 21687868  T
Q  181 ttataatcatg 191  Q
    | |||||||||    
T  21687867 tcataatcatg 21687857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 21683660 - 21683628
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttac 35  Q
    ||||||||||||||||||||| |||||||||||    
T  21683660 actcaacaatgcatatatatgtatatgacttac 21683628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 21688009 - 21687977
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttac 35  Q
    ||||||||||||||||||||| |||||||||||    
T  21688009 actcaacaatgcatatatatgtatatgacttac 21687977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 22743911 - 22743954
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttactccccaacaatt 47  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||    
T  22743911 actcaacaatgcatatata-gaatatgacttacaacccaacaatt 22743954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 18137725 - 18137925
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactc-cccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattt 99  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||| ||||| ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  18137725 ctactcaacaatgcatatttatgaatatgacttacactcccaacaatccaactgatgatacctcaacctttgaaatgaaattcaactacatgtataattt 18137824  T
Q  100 atttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccag-aaaaataacacaattgattataatcatggtcctac 198  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||| ||||||| ||| |||||||    
T  18137825 atttatatataaatatacataat-agccatcaacaattcatcatacttaattcaacagctctagtaaaaatatcacaattaattataaccattgtcctac 18137923  T
Q  199 ac 200  Q
    ||    
T  18137924 ac 18137925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 25772846 - 25773074
Alignment:
Q  4 ctcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttattt 103  Q
    ||||||||||||||| |||||||||||||||| |  ||||||||| | |||||||||||||| |||||||| |||||||||||||||| | |||||||||    
T  25772846 ctcaacaatgcatatttatgaatatgacttacacttcaacaattccattaatgatacttcaatctttgaaatgaaattcaacaacatgcaaaatttattt 25772945  T
Q  104 agatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacaccaa 203  Q
    | |||||| ||||||||| ||||||||||||||||||||||| |||||||| | |||||| ||||||||| |||| |||||||||||||||||||||| |    
T  25772946 a-atataattatacataa-cagccatcaacaattcatcataactaattcaataactccagtaaaataacataattaattataatcatggtcctacacc-a 25773042  T
Q  204 agttaaatcaactctattcaattacgtagcaa 235  Q
    |||| |||||| ||||| ||| ||| ||||||    
T  25773043 agttcaatcaattctatacaaatacatagcaa 25773074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 235
Target Start/End: Original strand, 21476464 - 21476686
Alignment:
Q  10 aatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatat 109  Q
    ||||||||| ||||||||||| |||| || ||||||||| | |||||||||||||| |||||||| |||||||||||| |||||||||||||||| ||||    
T  21476464 aatgcatatttatgaatatgatttacacctcaacaattccattaatgatacttcaatctttgaaatgaaattcaacaatatgtataatttattta-atat 21476562  T
Q  110 aaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacaccaaagttaa 209  Q
    |||||||||| | || ||||||| |||||||||||  |||||||||| |||||||||||||||| |||| |||||||||||||||||||||| ||||| |    
T  21476563 aaatatacat-accaaccatcaataattcatcatacataattcaacaactccagaaaaataacataattaattataatcatggtcctacacc-aagttca 21476660  T
Q  210 atcaactctattcaattacgtagcaa 235  Q
    ||||||||||| ||| ||| ||||||    
T  21476661 atcaactctatacaaatacatagcaa 21476686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 235
Target Start/End: Original strand, 21469963 - 21470185
Alignment:
Q  10 aatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatat 109  Q
    ||||||||| |||||||||||||||| || ||||||||  | |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  21469963 aatgcatatttatgaatatgacttacacctcaacaatttcattaatgatacttcaatctttgaaatgaaattcaacaacatgtataatttattta-atat 21470061  T
Q  110 aaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacaccaaagttaa 209  Q
    |||||||||| | || ||||||| |||||||||||  |||||||||| ||||||||||||| || |||| |||||||||||||||||||||| ||||| |    
T  21470062 aaatatacat-accaaccatcaataattcatcatacataattcaacaactccagaaaaatagcataattaattataatcatggtcctacacc-aagttca 21470159  T
Q  210 atcaactctattcaattacgtagcaa 235  Q
    ||||||| ||| ||| ||| ||||||    
T  21470160 atcaactttatacaaatacatagcaa 21470185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 9185825 - 9185662
Alignment:
Q  15 atatatatgaatatgacttactccccaaca-attcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaat 113  Q
    ||||||||||||||||||||| || ||||| | ||||| |||||||| | ||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  9185825 atatatatgaatatgacttacaccacaacatagtcaaccaatgatacattaacctttgaaatgaaattcaacaacttgtataatttatttaaatataaat 9185726  T
Q  114 atacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaatt 178  Q
    |||||||| || | ||||||||||||||||| |||||||||||||||| | |||||| |||||||    
T  9185725 atacataa-caacaatcaacaattcatcatacttaattcaacagctccggtaaaatagcacaatt 9185662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 4476675 - 4476791
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||||||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  4476675 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaattcaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 4476772  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  4476773 tttaaatataaatatacat 4476791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 23837808 - 23837924
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  23837808 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 23837905  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  23837906 tttaaatataaatatacat 23837924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 18315909 - 18315798
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||||||||||| |||||| || || ||||||||| ||| |||||||||| ||| |  ||||| ||||| |||||||    
T  18315909 aatttaacaacatgtatgatttaattagatataaacatacatcat-agtcatcaacaaatcaacataattaatccaaaaattccagcaaaat-acacaat 18315812  T
Q  178 tgattataatcatg 191  Q
    ||||  ||||||||    
T  18315811 tgatcttaatcatg 18315798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 22798449 - 22798338
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||| || |||| |||||| | ||  ||||||||| ||| |||||||||| |||||  |||| |||||| |||||||    
T  22798449 aattaaacaacatgtatgatttaattaaatgtaaacatacatca-caatcatcaacaaatcagcataattaatccaacaattccaaaaaaat-acacaat 22798352  T
Q  178 tgattataatcatg 191  Q
    | || |||||||||    
T  22798351 taatcataatcatg 22798338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 23621034 - 23620994
Alignment:
Q  79 attcaacaacatgtataatttatttagatataaatatacat 119  Q
    |||||| ||| ||||||||||||||| ||||||||||||||    
T  23621034 attcaaaaacttgtataatttatttaaatataaatatacat 23620994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 384336 - 384534
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||||| |||||||||||||||||||||||||||| || ||||  |||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  384336 ctactcgacaatgcatatatatgaatatgacttacacctcaacccttcaactaatgatacttcaatctttgaaatgaaattcaacaacatgtataattta 384435  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    ||||  ||||||||||||||| ||||||||||| |||||||| | ||||||||||| |||||| |||||||||||||| || ||||  || |||||||||    
T  384436 tttaagtataaatatacataa-cagccatcaacgattcatcaaacttaattcaacaactccagtaaaataacacaattaatcataactattgtcctacac 384534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 17022788 - 17022557
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||||||||||||||||||||| |||||||||||| || |||||| |||| |||| ||||| ||||| |||||| |||||||||||||||||||||||||    
T  17022788 ctactcaacaatgcatatatataaatatgacttacacctcaacaactcaattaataatactccaacccttgaaatgaaattcaacaacatgtataattta 17022689  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcata-attaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
    |||| |||| ||||||||||| |||||||||| ||||||||||| ||||||||||   ||||| ||||||||||||||| || |||||||||||||||||    
T  17022688 tttaaatat-aatatacataa-cagccatcaataattcatcatacattaattcaatgactcca-aaaaataacacaattaatcataatcatggtcctaca 17022592  T
Q  200 ccaaagttaaatcaactctattcaattacgtagcaa 235  Q
    || ||||| | |||||||||||||| ||| ||||||    
T  17022591 cc-aagttcattcaactctattcaaatacatagcaa 17022557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37599152 - 37599036
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  37599152 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 37599055  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  37599054 tttaaatataaatatacat 37599036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 38145620 - 38145504
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  38145620 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 38145523  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  38145522 tttaaatataaatatacat 38145504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22336418 - 22336533
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  22336418 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 22336515  T
Q  101 tttagatataaatataca 118  Q
    |||| |||||||||||||    
T  22336516 tttaaatataaatataca 22336533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 28371291 - 28371175
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| |||  ||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  28371291 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaatcaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 28371194  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  28371193 tttaaatataaatatacat 28371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 42960401 - 42960509
Alignment:
Q  9 caatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagata 108  Q
    |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||    
T  42960401 caatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataatttatttaaata 42960498  T
Q  109 taaatatacat 119  Q
    |||||||||||    
T  42960499 taaatatacat 42960509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22339956 - 22340071
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  22339956 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 22340053  T
Q  101 tttagatataaatataca 118  Q
    |||| |||||| ||||||    
T  22340054 tttaaatataattataca 22340071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 204
Target Start/End: Original strand, 10035363 - 10035486
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||||||||||| |||||| | ||| |||||||||||||||||||||||| |||||  |||||||||   |||||||    
T  10035363 aatttaacaacatgtatgatttaattagatataaacatacatca-cagtcatcaacaattcatcataattaatccaacaattccagaaaa--tacacaat 10035459  T
Q  178 tgattataatcatggtcctacaccaaa 204  Q
    |||| ||||||||| || |||| ||||    
T  10035460 tgatcataatcatgctcatacatcaaa 10035486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 21495115 - 21495208
Alignment:
Q  82 caacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||| ||||||| ||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  21495115 caacaacatgtatgatttattgagatataaacatacatca-cagtcatcaacaaatcatcataattaattcaatagctcca-aaaaataacacaat 21495208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 19511244 - 19511320
Alignment:
Q  42 acaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaatatacat 119  Q
    ||||| ||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  19511244 acaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataatttatttaaatataaatatacat 19511320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 18819161 - 18819242
Alignment:
Q  85 caacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaa 167  Q
    |||||||||| ||||| ||||||||||| |||||| | ||| ||||||||| |||||||||||||| |||||  |||||||||    
T  18819161 caacatgtatgatttaattagatataaacatacatca-cagtcatcaacaagtcatcataattaatccaacaattccagaaaa 18819242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 23444112 - 23444035
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaaca 156  Q
    ||||||| ||||||||| ||||||||| ||||||| |||||| | ||| ||||||||||||||||||| |||| |||||    
T  23444112 aattcaataacatgtatgatttatttaaatataaacatacatca-cagtcatcaacaattcatcataagtaatccaaca 23444035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 21888801 - 21888878
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaaca 156  Q
    |||| |||||||||||| ||||| ||||||||||| |||||| | ||| ||||||||| |||||||||| ||| |||||    
T  21888801 aatttaacaacatgtatgatttaattagatataaacatacatca-cagtcatcaacaaatcatcataatcaatccaaca 21888878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 21901791 - 21901673
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||||||||||| |||||| | ||| || |||||| || ||||||||||| |||||  |||| |||||| |||||||    
T  21901791 aatttaacaacatgtatgatttaattagatataaacatacatca-cagtcaccaacaaatcttcataattaatccaacaattcca-aaaaat-acacaat 21901695  T
Q  178 tgattataatcatggtcctaca 199  Q
    | || ||||||||  |||||||    
T  21901694 taatcataatcataatcctaca 21901673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 35
Target Start/End: Original strand, 21624782 - 21624813
Alignment:
Q  4 ctcaacaatgcatatatatgaatatgacttac 35  Q
    ||||||||||||||||||||||||||||||||    
T  21624782 ctcaacaatgcatatatatgaatatgacttac 21624813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 21901831 - 21901788
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttactccccaacaatt 47  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||    
T  21901831 actcaacaatgcatatatat-aatatgacttacaacccaacaatt 21901788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 1726 - 1521
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||||| || ||||||||||| ||||||||||| ||| || |||||| ||||||||||||||||||||||     
T  1726 ctactcatcaatgcatatatgtaaatatgacttacacctcaacaattcaattaatgatacttaaacattcgaaaag-aattcaacaacatgtataatttg 1628  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    |||| |||||||||||| | | || ||||||||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  1627 tttaaatataaatatacgtca-caaccatcaacaatccatcataattaattcaacagctccag-aaagtaacacaattaattataatcctggtcctacac 1530  T
Q  201 caaagttaa 209  Q
    |||||||||    
T  1529 caaagttaa 1521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 92608 - 92386
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    |||| |||| |||||||| |||||||||||||||| ||| || ||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||    
T  92608 ctacccaacgatgcatatttatgaatatgacttacaccctaataattcaactaatgttactacaacctttaaaaagaa-ttcaacaacatgtataattta 92510  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    ||||||||||||||||||| | ||  ||||||||| ||||||| |||||||||| ||||| || |||||||||||||| |||||||||||  ||||||||    
T  92509 tttagatataaatatacatca-caatcatcaacaaatcatcatgattaattcaatagctctag-aaaataacacaattaattataatcatactcctacac 92412  T
Q  201 caaagttaaatcaactctattcaatta 227  Q
    ||||||| |||||||  ||||||||||    
T  92411 caaagtt-aatcaacattattcaatta 92386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 7411 - 7251
Alignment:
Q  38 cccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaatt 137  Q
    ||||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  7411 cccaacaattcaactaatgatagatcaacctt-gaaatgaaattcaacaacatgtataatttatttaaatataaatgtacataa-cagccatcaacaatt 7314  T
Q  138 catcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacac 200  Q
    ||||||| |||||||||||| || || |||||||||| ||| ||||||||||| |||||||||    
T  7313 catcatacttaattcaacagttctagtaaaataacaccattaattataatcattgtcctacac 7251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9855 - 9816
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactcccc 40  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  9855 ctactcaacaatgcatatatatgaatatgacttacacccc 9816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 21660 - 21497
Alignment:
Q  15 atatatatgaatatgacttactccccaaca-attcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaat 113  Q
    ||||||||||||||||||||| || ||||| | ||| |||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  21660 atatatatgaatatgacttacaccacaacatagtcatctaatgatacatcaacctttgaaatgaaattcaacaacttgtataatttatttaaatataaat 21561  T
Q  114 atacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaatt 178  Q
    |||||||| |||| ||||||||||||||||| |||||||||||||| | | ||||||||||||||    
T  21560 atacataa-cagcaatcaacaattcatcatacttaattcaacagcttcggtaaaataacacaatt 21497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 2931 - 3109
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaat-tcaactaatgatacttcaacctttgaaaa-gaaattcaacaacatgtataatt 98  Q
    |||||||||| ||||||||||| |||||||||||| || |||||   ||||||||||||||  ||||||||||||| ||||||||||||| |||||||||    
T  2931 ctactcaacagtgcatatatataaatatgacttacacctcaacatgatcaactaatgatacaacaacctttgaaaatgaaattcaacaacttgtataatt 3030  T
Q  99 tatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaatt 178  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||| | || ||||||||||| | ||||||||||||||    
T  3031 tatttaaatataaatatacataa-cagcaatcaacaattcatcatactcaactcaacagctccggtaaaataacacaatt 3109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 29443 - 29622
Alignment:
Q  1 ctactcaacaatgcatatatat--gaatatgacttactccccaaca-attcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataat 97  Q
    |||||| |||||||||||||||  ||||||||||||  || ||||| | |||  ||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  29443 ctactcgacaatgcatatatatatgaatatgacttataccacaacatagtcatataatgatacatcaacctttgaaatgaaattcaacaacttgtataat 29542  T
Q  98 ttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaatt 178  Q
    ||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| | | ||||||||||||    
T  29543 ttatttaaatataaatatacataa-cagcaatcaacaattcatcatacttaattcaacagctccggtagaataacacaatt 29622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 34699 - 34863
Alignment:
Q  15 atatatatgaatatgacttactccccaaca-attcaactaa-tgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaa 112  Q
    ||||||||||||||||||||| || ||||| | ||| |||| |||||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  34699 atatatatgaatatgacttacaccacaacatagtcatctaaatgatacatcaacctttgaaatgaaattcaacaacttgtataatttatttaaatataaa 34798  T
Q  113 tatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaatt 178  Q
    ||||||||| |||  ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  34799 tatacataa-cagaaatcaacaattcatcatacttaattcaacagctccggtaaaataacacaatt 34863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 8837 - 9045
Alignment:
Q  4 ctcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataatttattt 103  Q
    ||||| ||||||||||||||||||||| |||  || ||||||||| | ||| ||| || ||| |||||||| ||||||| ||||||  ||||||||||||    
T  8837 ctcaataatgcatatatatgaatatgatttatacctcaacaattccattaaggattctccaatctttgaaatgaaattcgacaacacatataatttattt 8936  T
Q  104 agatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctacaccaa 203  Q
    | |||||||||| ||||| |||||||||| || |||||||| ||||||||||| | | || |||||||||||||| ||||||||||||||||||||||||    
T  8937 a-atataaatatgcataa-cagccatcaataactcatcatacttaattcaacaac-ctagtaaaataacacaattaattataatcatggtcctacaccaa 9033  T
Q  204 agttaaatcaac 215  Q
     ||| |||||||    
T  9034 ggttcaatcaac 9045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 2185 - 2307
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||||||| ||||||||||||||||  |||||| | ||| ||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  2185 aattcaacaacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcataattaattcaatagctccag-aaaataacacaat 2282  T
Q  178 tgattataatcatggtcctacacca 202  Q
    | |||||||||||| ||||||||||    
T  2283 taattataatcatgctcctacacca 2307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 25001 - 25123
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||||||| ||||||||||||||||  |||||| | ||| ||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  25001 aattcaacaacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcataattaattcaatagctccag-aaaataacacaat 25098  T
Q  178 tgattataatcatggtcctacacca 202  Q
    | |||||||||||| ||||||||||    
T  25099 taattataatcatgctcctacacca 25123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 35811 - 35932
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||||||| ||||||||||||||||  |||||| | ||| ||||||||| |||||||| || |||||| |||||||| |||||||||||||    
T  35811 aattcaacaacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcatactt-attcaatagctccag-aaaataacacaat 35907  T
Q  178 tgattataatcatggtcctacacca 202  Q
    | |||||||||||| ||||||||||    
T  35908 taattataatcatgctcctacacca 35932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 110504 - 110620
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  110504 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 110601  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  110602 tttaaatataaatatacat 110620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 142913 - 143016
Alignment:
Q  84 acaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgatta 183  Q
    ||||||||||| |||||| |||||||||  |||||| | ||  ||||||||| ||||||||||| || ||| |||||||| ||||||| | |||| ||||    
T  142913 acaacatgtatgatttatctagatataagcatacatca-caatcatcaacaaatcatcataatttatccaatagctccag-aaaataatataattaatta 143010  T
Q  184 taatca 189  Q
    ||||||    
T  143011 taatca 143016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 9236 - 9043
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  9236 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcaacaacaagtataattta 9139  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
    |||| |||||||||||||| || | ||| ||| ||| ||||||||||||| |||||  | |||||||   |||||||| || ||||||||| |||||||    
T  9138 tttaaatataaatatacatcat-aaccaacaataatccatcataattaatccaacaatttcagaaaa--tacacaattaatcataatcatgttcctaca 9043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 158
Target Start/End: Complemental strand, 8444 - 8340
Alignment:
Q  53 aatgatacttcaacctttgaaaagaaattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattc 152  Q
    |||||||| ||||||||||||| ||| || |||||| ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||    
T  8444 aatgatacatcaacctttgaaatgaattttaacaacttgtataatttatttaaatataaatatacataa-cagcaatcaacaattcatcatacttaattc 8346  T
Q  153 aacagc 158  Q
    ||||||    
T  8345 aacagc 8340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 227
Target Start/End: Complemental strand, 41587 - 41445
Alignment:
Q  82 caacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgat 181  Q
    ||||||||||||| ||||| ||||||||||| |||||| | ||| ||||||||| |||||| ||||| ||||| |||||||||||| |||||||||  ||    
T  41587 caacaacatgtatgatttacttagatataaacatacatca-cagtcatcaacaaatcatcaaaattatttcaatagctccagaaaa-taacacaataaat 41490  T
Q  182 tataatcatggtcctacaccaaagttaaatcaactctattcaatta 227  Q
    |||||||||| ||||||||||||||| |||||||  ||||||||||    
T  41489 tataatcatgctcctacaccaaagtt-aatcaacattattcaatta 41445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 18146 - 18243
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||||||| |||||||||||||||| ||||||| | ||| |||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  18146 aattcaacaacatgtatgatttatttagatataagtatacatca-cagtcatcaacaattcatcataattaattcaatagctcca-taaaataacacaat 18243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 18117 - 18153
Alignment:
Q  15 atatatatgaatatgacttactccccaacaattcaac 51  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  18117 atatatatgaatatgacatacaccccaacaattcaac 18153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 10208 - 10092
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  10208 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 10111  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  10110 tttaaatataaatatacat 10092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 25684 - 25829
Alignment:
Q  82 caacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgat 181  Q
    ||||||||||||| ||||||||||||||||  |||||| | ||| ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||    
T  25684 caacaacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcataa-taattaaatagctccag-aaaataacacaattaat 25780  T
Q  182 tataatcatggtcctacaccaaagttaaatcaactctattcaattacgtag 232  Q
    |||||||||| |||||| |||||||| |||||||  ||||||| |||||||    
T  25781 tataatcatgttcctac-ccaaagtt-aatcaacattattcaactacgtag 25829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 4720 - 4824
Alignment:
Q  83 aacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgatt 182  Q
    |||||||||||| ||||||||||||||||  |||||| | ||| ||||||||| ||||||||||| |||||| |||||||| | ||||||||||||||||    
T  4720 aacaacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcataattgattcaatagctccag-agaataacacaattgatt 4817  T
Q  183 ataatca 189  Q
    |||||||    
T  4818 ataatca 4824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 2715 - 2599
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | || ||||||| | || | ||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  2715 ctactcatcaatgcatatatgtaaacatgactt-cacctcgacaatccaattaataatacttcaacctttgaaaagaa-ttcagcaacatgtataattta 2618  T
Q  101 tttagatataaatatacat 119  Q
    |||| ||||||||||||||    
T  2617 tttaaatataaatatacat 2599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 795 - 645
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||||||| |||||||| ||||||||||||||||  |||||| | ||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  795 aattcaacgacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcaccataattaattcaatagctccag-aaaataacacaat 698  T
Q  178 tgattataatcatggtcctacaccaaagttaaatcaactctattcaattacgta 231  Q
      |||||| ||| | ||||||| | ||||| | |||  ||||||||||||||||    
T  697 aaattatagtcaagctcctacatc-aagttcattcatttctattcaattacgta 645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 81098 - 80989
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||| ||||| ||||||||||||||||  |||||| | ||| ||||||||| |||||||||||||||||| |||| ||| |||||||||||||    
T  81098 aattcaacaacgtgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcataattaattcaatagcttcag-aaaataacacaat 81001  T
Q  178 tgattataatca 189  Q
    | | ||||||||    
T  81000 taactataatca 80989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 98404 - 98306
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||| ||||| ||||||||||||||||  |||||| | ||| ||||||||| |||| | ||||||||||| |||||||| |||||||||||||    
T  98404 aattcaacaacgtgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcattaaaattaattcaatagctccag-aaaataacacaat 98307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 26468 - 26661
Alignment:
Q  1 ctactcaacaatgcatatatatgaatatgacttactccccaacaattcaactaatgatacttcaacctttgaaaagaaattcaacaacatgtataattta 100  Q
    ||||||| |||||||||||| | |||||||||| | || | ||||| ||| |||| ||||  ||||||||||||||  ||||||||| ||||||||| ||    
T  26468 ctactcatcaatgcatatatgtaaatatgactt-cacctcgacaatccaattaataataccccaacctttgaaaag-gattcaacaatatgtataatcta 26565  T
Q  101 tttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattataatcatggtcctaca 199  Q
    |||| |||||||||| | | | |||||| ||| ||| ||||||||||||| |||||  |||||| ||   |||||||| || ||||||||| |||||||    
T  26566 tttaaatataaatatccttca-cagccaacaataatccatcataattaatccaacaattccagagaa--tacacaattaatcataatcatgctcctaca 26661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 124855 - 124763
Alignment:
Q  82 caacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaa 176  Q
    ||||||||||||| ||||||||||||||||  |||||| | ||| ||||||||| |||||||||||||||||| ||||| || ||||||||||||    
T  124855 caacaacatgtatgatttatttagatataagcatacatca-cagtcatcaacaaatcatcataattaattcaatagctctag-aaaataacacaa 124763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 53561 - 53474
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaa 166  Q
    ||||||||||||||||| ||||| ||||||||||| |||||| | ||| | ||||||| ||||||||| |||||||| |||||||||||    
T  53561 aattcaacaacatgtatgatttaattagatataaacatacatca-cagtcctcaacaaatcatcataaataattcaatagctccagaaa 53474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 42866 - 42757
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||||||| ||||| ||||||||||| |||||| | | | |||| |||| ||||||||| |||||||| |||||||| ||| ||| |||||    
T  42866 aattcaacaacatgtatgatttaattagatataaacatacatca-cggtcatcgacaaatcatcataaataattcaatagctccag-aaagtaatacaat 42769  T
Q  178 tgattataatca 189  Q
    | ||||||||||    
T  42768 taattataatca 42757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 42906 - 42859
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttactccccaacaattcaac 51  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  42906 actcaacaatgcatatatat-aatatgacttacaacccaacaattcaac 42859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 12674 - 12783
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||||||||||| |||||| | ||| ||||||||| |||||||||||||| |||||  ||||||||    |||||||    
T  12674 aatttaacaacatgtatgatttaattagatataaacatacatca-cagtcatcaacaaatcatcataattaatccaacaattccagaaa---tacacaat 12769  T
Q  178 tgattataatcatg 191  Q
    |||| |||||||||    
T  12770 tgatcataatcatg 12783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 18106 - 17997
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||||||||||| |||| ||||| ||||||||||| |||||| | ||| ||||| ||| |||||||||||  | |||||||||||| ||||||| |||||    
T  18106 aattcaacaacacgtatgatttaattagatataaacatacatca-cagtcatcagcaaatcatcataattggtccaacagctccag-aaaataatacaat 18009  T
Q  178 tgattataatca 189  Q
    | ||||||||||    
T  18008 taattataatca 17997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 18146 - 18099
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttactccccaacaattcaac 51  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||||||    
T  18146 actcaacaatgaatatatat-aatatgacttacaacccaacaattcaac 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 2844 - 2743
Alignment:
Q  86 aacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattgattata 185  Q
    ||||||||||||||||||| |||||||||| || |  ||| ||||||||| ||||||| ||  |||||||||||||||||||| |||||||||  |||||    
T  2844 aacatgtataatttatttaaatataaatatgca-acacagtcatcaacaaatcatcatgat--attcaacagctccagaaaaa-aacacaattacttata 2749  T
Q  186 atcatg 191  Q
    ||||||    
T  2748 atcatg 2743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 72831 - 72713
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||||||||||| ||| || | ||| ||||||||| |||||||||||||| |||||  |||||||||   |||||||    
T  72831 aatttaacaacatgtattatttaattagatataaacatatatca-cagtcatcaacaaatcatcataattaatccaacaattccagaaaa--tacacaat 72735  T
Q  178 tgattataatcatggtcctaca 199  Q
    | || ||||||||| |||||||    
T  72734 taatcataatcatgctcctaca 72713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 46656 - 46579
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaaca 156  Q
    |||| |||||||||||| ||||| ||| ||||||| |||||| | ||  ||||||||| |||||||||||||| |||||    
T  46656 aatttaacaacatgtatgatttaattaaatataaacatacatca-caatcatcaacaaatcatcataattaatccaaca 46579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 23245 - 23351
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattga 180  Q
    |||||| |||||||  |||| ||||||||||| |||| | | ||| ||||||| | |||||||||||||||||| |||||||| |||||| ||||||| |    
T  23245 tcaacatcatgtatgttttaattagatataaacatacctca-cagtcatcaaccaatcatcataattaattcaatagctccag-aaaatatcacaattaa 23342  T
Q  181 ttataatca 189  Q
    |||||||||    
T  23343 ttataatca 23351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 2166 - 2272
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaattga 180  Q
    |||||| |||||||  |||| ||||||||||| |||| | | ||  ||||||| | |||||||||||||||||| |||||||| |||||| ||||||| |    
T  2166 tcaacatcatgtatgttttaattagatataaacatacctca-caatcatcaacgaatcatcataattaattcaatagctccag-aaaatatcacaattaa 2263  T
Q  181 ttataatca 189  Q
    |||||||||    
T  2264 ttataatca 2272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 2122 - 2170
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttactccccaacaattcaac 51  Q
    ||||||| |||||||||||| ||||||||||||  |||||||| |||||    
T  2122 actcaaccatgcatatatataaatatgacttacaacccaacaaatcaac 2170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 3714 - 3626
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaa 167  Q
    |||| |||||||||||| ||||| || |||||||| |||||| | ||| ||||||||| |||||||||||||| |||||  |||||||||    
T  3714 aatttaacaacatgtatgatttaattcgatataaacatacatca-cagtcatcaacaaatcatcataattaatccaacaattccagaaaa 3626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 3754 - 3711
Alignment:
Q  3 actcaacaatgcatatatatgaatatgacttactccccaacaatt 47  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||    
T  3754 actcaacaatgcatatatat-aatatgacttacaacccaacaatt 3711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 207647 - 207536
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    ||||||||||||||||| ||||| ||| ||||||| |||||| || || ||||||||| ||||||||| |||| |||||   |||||||||| ||| |||    
T  207647 aattcaacaacatgtatgatttaattaaatataaacatacatcat-agtcatcaacaaatcatcataagtaatccaacaatcccagaaaaat-acaaaat 207550  T
Q  178 tgattataatcatg 191  Q
    | || |||||||||    
T  207549 taatcataatcatg 207536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 37 - 147
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||| || |||| |||||| | ||| |||||||||||||||||| ||||| |||||  || ||||||   |||||||    
T  37 aatttaacaacatgtatgatttaattaaatgtaaacatacatta-cagtcatcaacaattcatcatagttaatccaacaattctagaaaa--tacacaat 133  T
Q  178 tgattataatcatg 191  Q
    |||| |||||||||    
T  134 tgatcataatcatg 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 13847 - 13957
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||| || |||| |||||| | ||| ||||||||||| |||||| ||||| |||||  |||||||||   |||||||    
T  13847 aatttaacaacatgtatgatttaattaaatgtaaacatacatta-cagtcatcaacaattgatcatagttaatccaacaattccagaaaa--tacacaat 13943  T
Q  178 tgattataatcatg 191  Q
    |||| |||||||||    
T  13944 tgatcataatcatg 13957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 10587 - 10496
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaata 170  Q
    |||| |||||| ||||| ||||||||| ||||||| |||||| | ||| ||||||||||||| ||||| |||| |||||   |||||||||||    
T  10587 aattaaacaacttgtatgatttatttaaatataaacatacatca-cagtcatcaacaattcaacataagtaatccaacaatcccagaaaaata 10496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 18766 - 18675
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaata 170  Q
    |||| |||||| ||||| ||||||||| ||||||| |||||| | ||| ||||||||||||| ||||| |||| |||||   |||||||||||    
T  18766 aattaaacaacttgtatgatttatttaaatataaacatacatca-cagtcatcaacaattcaacataagtaatccaacaatcccagaaaaata 18675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 6708 - 6623
Alignment:
Q  81 tcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaa 167  Q
    |||| ||||||||| ||||| | ||||||||  |||||| | ||| | |||||||  ||||||||||||||||| ||||||||||||    
T  6708 tcaagaacatgtatgatttaatcagatataagcatacatca-cagtcttcaacaaaccatcataattaattcaatagctccagaaaa 6623  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 22676 - 22566
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||| || |||| |||||| | ||| ||||||||| |||||||| ||||| || ||  |||||||||   |||||||    
T  22676 aattaaacaacatgtatgatttaattaaatgtaaacatacatca-cagtcatcaacaaatcatcatagttaatccagcaattccagaaaa--tacacaat 22580  T
Q  178 tgattataatcatg 191  Q
    |||| |||||||||    
T  22579 tgatcataatcatg 22566  T

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Target: scaffold0091; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 26873 - 26763
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaataacacaat 177  Q
    |||| |||||||||||| ||||| ||| || |||| |||||| | ||| ||||||||| |||||||| ||||| || ||  |||||||||   |||||||    
T  26873 aattaaacaacatgtatgatttaattaaatgtaaacatacatca-cagtcatcaacaaatcatcatagttaatccatcaattccagaaaa--tacacaat 26777  T
Q  178 tgattataatcatg 191  Q
    |||| |||||||||    
T  26776 tgatcataatcatg 26763  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 33929 - 33970
Alignment:
Q  79 attcaacaacatgtataatttatttagatataaatatacata 120  Q
    |||||||||| ||||||||||||||| |||||| ||||||||    
T  33929 attcaacaacttgtataatttatttaaatataattatacata 33970  T

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Target: scaffold0081 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 55864 - 55775
Alignment:
Q  78 aattcaacaacatgtataatttatttagatataaatatacataatcagccatcaacaattcatcataattaattcaacagctccagaaaaata 170  Q
    ||||||||||||||||| ||||| ||| || ||||||||||| | ||| ||||||||  |||||||||| ||| |||||  ||||||||||||    
T  55864 aattcaacaacatgtatgatttaatta-atgtaaatatacatca-cagtcatcaacagatcatcataatcaatccaaca-atccagaaaaata 55775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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