View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0648_low_29 (Length: 316)

Name: NF0648_low_29
Description: NF0648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0648_low_29
NF0648_low_29
[»] chr6 (23 HSPs)
chr6 (64-294)||(27851111-27851341)
chr6 (64-294)||(25956570-25956799)
chr6 (64-204)||(20734160-20734300)
chr6 (180-294)||(19399814-19399928)
chr6 (64-189)||(22420981-22421106)
chr6 (64-189)||(2201133-2201258)
chr6 (64-154)||(34296982-34297072)
chr6 (209-294)||(20734158-20734243)
chr6 (209-294)||(22421023-22421108)
chr6 (209-294)||(2201175-2201260)
chr6 (209-294)||(34296980-34297065)
chr6 (209-279)||(27851273-27851343)
chr6 (66-139)||(19399822-19399895)
chr6 (210-294)||(31630622-31630705)
chr6 (219-294)||(18927880-18927954)
chr6 (64-204)||(25956717-25956856)
chr6 (72-139)||(18927888-18927954)
chr6 (64-123)||(31630623-31630681)
chr6 (210-286)||(25956569-25956645)
chr6 (252-294)||(18708704-18708746)
chr6 (252-294)||(23151072-23151114)
chr6 (252-294)||(27322224-27322266)
chr6 (177-223)||(27325487-27325533)
[»] chr4 (26 HSPs)
chr4 (88-294)||(46642777-46642982)
chr4 (64-291)||(13844485-13844711)
chr4 (64-204)||(33186101-33186241)
chr4 (209-294)||(33186158-33186243)
chr4 (64-183)||(15880717-15880836)
chr4 (209-294)||(15880753-15880838)
chr4 (117-223)||(15099351-15099457)
chr4 (207-294)||(52873249-52873335)
chr4 (210-294)||(362189-362272)
chr4 (180-294)||(15868765-15868877)
chr4 (219-294)||(9923353-9923427)
chr4 (219-294)||(11479432-11479506)
chr4 (72-204)||(35812211-35812342)
chr4 (64-123)||(362213-362271)
chr4 (219-294)||(35812211-35812285)
chr4 (64-131)||(52873253-52873319)
chr4 (210-286)||(13844636-13844712)
chr4 (117-181)||(15190360-15190424)
chr4 (72-139)||(9923361-9923427)
chr4 (72-139)||(11479432-11479498)
chr4 (180-294)||(630830-630942)
chr4 (72-111)||(14185252-14185291)
chr4 (252-294)||(19609528-19609570)
chr4 (229-283)||(46642934-46642988)
chr4 (180-229)||(13812865-13812914)
chr4 (226-258)||(14185252-14185284)
[»] chr1 (20 HSPs)
chr1 (64-294)||(28194398-28194627)
chr1 (72-294)||(43697316-43697537)
chr1 (64-204)||(51274301-51274441)
chr1 (117-223)||(49261342-49261448)
chr1 (119-223)||(20636851-20636955)
chr1 (64-143)||(8885457-8885536)
chr1 (64-166)||(12328568-12328670)
chr1 (209-294)||(8885453-8885538)
chr1 (209-294)||(12328566-12328651)
chr1 (209-286)||(51274299-51274376)
chr1 (219-286)||(51326907-51326974)
chr1 (117-223)||(35981700-35981806)
chr1 (72-142)||(51326904-51326974)
chr1 (207-278)||(43543069-43543139)
chr1 (64-131)||(43543069-43543135)
chr1 (210-294)||(46382652-46382733)
chr1 (210-286)||(28194397-28194473)
chr1 (240-283)||(48301078-48301121)
chr1 (210-286)||(43697470-43697546)
chr1 (64-131)||(46382653-46382717)
[»] chr3 (27 HSPs)
chr3 (31-204)||(31415403-31415576)
chr3 (132-294)||(18439864-18440025)
chr3 (88-294)||(12269513-12269718)
chr3 (66-204)||(31224669-31224807)
chr3 (180-294)||(49969934-49970048)
chr3 (64-204)||(15447713-15447850)
chr3 (165-294)||(20630147-20630275)
chr3 (64-203)||(11912921-11913060)
chr3 (64-165)||(6808175-6808276)
chr3 (211-294)||(31415460-31415543)
chr3 (209-291)||(11912980-11913062)
chr3 (209-286)||(6808201-6808278)
chr3 (213-294)||(31224669-31224750)
chr3 (209-291)||(15447711-15447793)
chr3 (117-223)||(1465423-1465529)
chr3 (64-204)||(49969965-49970105)
chr3 (118-214)||(49389644-49389740)
chr3 (219-294)||(49389772-49389848)
chr3 (210-294)||(1988944-1989028)
chr3 (64-131)||(20630193-20630259)
chr3 (240-286)||(40812050-40812096)
chr3 (64-131)||(18439943-18440009)
chr3 (72-204)||(49389772-49389905)
chr3 (240-294)||(5841985-5842039)
chr3 (236-278)||(30175304-30175346)
chr3 (252-294)||(40807200-40807242)
chr3 (93-139)||(40812050-40812096)
[»] scaffold0116 (5 HSPs)
scaffold0116 (64-294)||(43733-43962)
scaffold0116 (64-249)||(47653-47837)
scaffold0116 (64-204)||(43880-44019)
scaffold0116 (210-286)||(43732-43808)
scaffold0116 (210-286)||(47652-47728)
[»] chr7 (31 HSPs)
chr7 (31-204)||(38480236-38480409)
chr7 (132-294)||(17232564-17232725)
chr7 (66-204)||(30820971-30821109)
chr7 (66-204)||(36685965-36686103)
chr7 (64-189)||(9320442-9320567)
chr7 (64-189)||(11092751-11092876)
chr7 (132-294)||(8468370-8468524)
chr7 (64-189)||(11085013-11085138)
chr7 (64-203)||(15213699-15213838)
chr7 (211-294)||(38480293-38480376)
chr7 (209-294)||(9320440-9320525)
chr7 (209-294)||(11085055-11085140)
chr7 (209-294)||(11092793-11092878)
chr7 (209-294)||(15213755-15213840)
chr7 (213-294)||(30820971-30821052)
chr7 (117-223)||(9389709-9389815)
chr7 (213-294)||(36685965-36686046)
chr7 (64-170)||(15439318-15439424)
chr7 (207-294)||(14270136-14270222)
chr7 (210-294)||(45847735-45847818)
chr7 (64-204)||(8468313-8468452)
chr7 (64-131)||(14270140-14270206)
chr7 (64-131)||(45847736-45847802)
chr7 (213-294)||(37727642-37727723)
chr7 (210-286)||(15439349-15439425)
chr7 (64-204)||(17232507-17232646)
chr7 (250-294)||(32434394-32434438)
chr7 (252-294)||(11066672-11066714)
chr7 (252-294)||(12371482-12371524)
chr7 (252-294)||(13148278-13148320)
chr7 (196-294)||(18302111-18302207)
[»] chr5 (28 HSPs)
chr5 (64-294)||(5889125-5889353)
chr5 (64-204)||(12122234-12122374)
chr5 (66-204)||(21555094-21555232)
chr5 (66-204)||(21557760-21557898)
chr5 (64-189)||(24212382-24212507)
chr5 (66-204)||(31455689-31455830)
chr5 (64-203)||(36460170-36460309)
chr5 (64-189)||(35852637-35852762)
chr5 (66-204)||(31455076-31455217)
chr5 (209-294)||(12122232-12122317)
chr5 (209-294)||(24212424-24212509)
chr5 (209-294)||(36460226-36460311)
chr5 (65-200)||(30615759-30615893)
chr5 (213-294)||(21557760-21557841)
chr5 (209-286)||(35852687-35852764)
chr5 (129-223)||(21741557-21741651)
chr5 (192-294)||(29915150-29915251)
chr5 (212-294)||(30615812-30615893)
chr5 (86-203)||(17875214-17875331)
chr5 (213-294)||(21555094-21555175)
chr5 (213-285)||(31455758-31455830)
chr5 (213-285)||(31455145-31455217)
chr5 (180-294)||(21871627-21871739)
chr5 (180-294)||(21875907-21876019)
chr5 (64-204)||(5889271-5889410)
chr5 (210-285)||(5889124-5889199)
chr5 (68-131)||(29915173-29915235)
chr5 (238-294)||(17875270-17875326)
[»] scaffold0009 (2 HSPs)
scaffold0009 (132-294)||(85191-85352)
scaffold0009 (64-131)||(85207-85273)
[»] scaffold0737 (2 HSPs)
scaffold0737 (64-204)||(6391-6531)
scaffold0737 (209-294)||(6389-6474)
[»] chr8 (23 HSPs)
chr8 (64-204)||(21579919-21580059)
chr8 (64-204)||(29763581-29763720)
chr8 (72-189)||(32807279-32807396)
chr8 (72-204)||(41680843-41680975)
chr8 (209-294)||(29763579-29763664)
chr8 (64-155)||(42560240-42560331)
chr8 (209-291)||(21579917-21579999)
chr8 (209-294)||(42560238-42560323)
chr8 (219-294)||(32807321-32807396)
chr8 (64-204)||(39833870-39834012)
chr8 (225-294)||(18760591-18760660)
chr8 (209-294)||(41680833-41680918)
chr8 (210-294)||(27472391-27472474)
chr8 (210-294)||(38550086-38550169)
chr8 (207-294)||(1327117-1327203)
chr8 (64-204)||(38550087-38550226)
chr8 (64-131)||(27472392-27472458)
chr8 (74-204)||(18760534-18760664)
chr8 (64-131)||(1327121-1327187)
chr8 (252-294)||(19139969-19140011)
chr8 (252-294)||(39936816-39936858)
chr8 (238-294)||(20982747-20982803)
chr8 (148-204)||(22965748-22965804)
[»] scaffold1351 (2 HSPs)
scaffold1351 (64-204)||(1565-1705)
scaffold1351 (209-286)||(1630-1707)
[»] scaffold0071 (2 HSPs)
scaffold0071 (64-204)||(14339-14479)
scaffold0071 (209-286)||(14404-14481)
[»] chr2 (20 HSPs)
chr2 (64-204)||(24865483-24865623)
chr2 (64-204)||(22500988-22501128)
chr2 (64-204)||(22508922-22509062)
chr2 (64-204)||(7672271-7672405)
chr2 (209-286)||(22501053-22501130)
chr2 (209-286)||(22508987-22509064)
chr2 (209-286)||(24865481-24865558)
chr2 (64-143)||(2524442-2524521)
chr2 (209-294)||(2524440-2524525)
chr2 (209-275)||(7672269-7672335)
chr2 (219-294)||(6576430-6576505)
chr2 (72-204)||(6576373-6576505)
chr2 (238-286)||(22501147-22501195)
chr2 (238-286)||(22509081-22509129)
chr2 (238-294)||(24883657-24883713)
chr2 (86-140)||(22501146-22501200)
chr2 (86-140)||(22509080-22509134)
chr2 (72-136)||(24436258-24436321)
chr2 (219-294)||(24436247-24436321)
chr2 (91-139)||(24883665-24883713)
[»] scaffold0395 (2 HSPs)
scaffold0395 (64-204)||(10894-11034)
scaffold0395 (209-294)||(10951-11036)
[»] scaffold0815 (2 HSPs)
scaffold0815 (76-204)||(483-611)
scaffold0815 (225-294)||(540-609)
[»] scaffold0599 (4 HSPs)
scaffold0599 (64-203)||(4615-4754)
scaffold0599 (64-203)||(197-336)
scaffold0599 (209-291)||(4674-4756)
scaffold0599 (209-291)||(256-338)
[»] scaffold0434 (2 HSPs)
scaffold0434 (209-294)||(6770-6855)
scaffold0434 (64-131)||(6772-6839)
[»] scaffold1137 (1 HSPs)
scaffold1137 (117-223)||(2304-2410)
[»] scaffold0100 (2 HSPs)
scaffold0100 (207-294)||(36140-36226)
scaffold0100 (64-139)||(36144-36218)
[»] scaffold0061 (4 HSPs)
scaffold0061 (210-294)||(15439-15523)
scaffold0061 (210-294)||(24497-24581)
scaffold0061 (72-139)||(15448-15515)
scaffold0061 (72-139)||(24506-24573)
[»] scaffold0080 (2 HSPs)
scaffold0080 (219-294)||(59327-59401)
scaffold0080 (72-204)||(59327-59458)
[»] scaffold0004 (2 HSPs)
scaffold0004 (208-278)||(362964-363033)
scaffold0004 (64-131)||(362964-363030)
[»] scaffold0810 (2 HSPs)
scaffold0810 (229-294)||(2988-3053)
scaffold0810 (71-131)||(3004-3063)
[»] scaffold0513 (2 HSPs)
scaffold0513 (207-294)||(10961-11047)
scaffold0513 (64-131)||(10965-11031)
[»] scaffold0075 (1 HSPs)
scaffold0075 (180-294)||(8350-8462)
[»] scaffold0001 (2 HSPs)
scaffold0001 (219-294)||(76946-77019)
scaffold0001 (72-139)||(76954-77019)
[»] scaffold0335 (2 HSPs)
scaffold0335 (219-294)||(861-935)
scaffold0335 (72-139)||(869-935)
[»] scaffold0802 (1 HSPs)
scaffold0802 (219-294)||(5478-5552)
[»] scaffold0371 (1 HSPs)
scaffold0371 (219-294)||(3120-3194)
[»] scaffold0384 (1 HSPs)
scaffold0384 (252-294)||(8192-8234)
[»] scaffold0375 (1 HSPs)
scaffold0375 (252-294)||(9108-9150)
[»] scaffold0134 (1 HSPs)
scaffold0134 (252-294)||(10032-10074)
[»] scaffold0124 (1 HSPs)
scaffold0124 (196-294)||(24726-24822)


Alignment Details
Target: chr6 (Bit Score: 144; Significance: 1e-75; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 64 - 294
Target Start/End: Complemental strand, 27851341 - 27851111
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaatt-gttatatatgaagaatattattggtggtta 162  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||    
T  27851341 gatttaccttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaagattattattgatggtta 27851242  T
Q  163 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgtt 262  Q
    |||||||| ||||||||||||||||||||||| ||||||| | ||||||||||||||||||  || ||||||| |||||||||||||| ||||||| | |    
T  27851241 cttgttgtgtatgtttaaatgatgttgtcttgttgttgtgctgaatatgatttactttgatgctt-aatgtgagaatatttatatattgtgaaagatgct 27851143  T
Q  263 gatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||||||| | ||| |||||||||||    
T  27851142 gatatgaagttgtattggttgtatttgatgat 27851111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 64 - 294
Target Start/End: Original strand, 25956570 - 25956799
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| |||||||    
T  25956570 gatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggttac 25956669  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttg 263  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| | ||    
T  25956670 ttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatattgtgaaagatgctg 25956768  T
Q  264 atatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| ||| |||||||||||    
T  25956769 atatgaagttgtaatggttgtatttgatgat 25956799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 20734160 - 20734300
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||| ||    
T  20734160 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 20734259  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || ||||||||||||| ||||||||||||||||||||    
T  20734260 ttgctgcatatgtttaaatggtgttgtcttgctgttgtgat 20734300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 19399928 - 19399814
Alignment:
Q  180 aatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 279  Q
    |||||||||||||| |||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||     
T  19399928 aatgatgttgtcttactgttgtgatgaatatggtttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatg 19399829  T
Q  280 gttatatttgatgat 294  Q
    |||||||||||||||    
T  19399828 gttatatttgatgat 19399814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 22421106 - 22420981
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| | || ||    
T  22421106 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatagtgac 22421007  T
Q  164 ttgttgtatatgtttaaatgatgttg 189  Q
    |||||| |||||| |||||| |||||    
T  22421006 ttgttgcatatgtctaaatggtgttg 22420981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 2201258 - 2201133
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||| ||    
T  2201258 gatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 2201159  T
Q  164 ttgttgtatatgtttaaatgatgttg 189  Q
    ||| || |||||| |||||| |||||    
T  2201158 ttgctgcatatgtctaaatggtgttg 2201133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 154
Target Start/End: Original strand, 34296982 - 34297072
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattatt 154  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||    
T  34296982 gatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattatt 34297072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 20734158 - 20734243
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  20734158 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 20734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 22421108 - 22421023
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  22421108 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 22421023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 2201260 - 2201175
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  2201260 atgatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 2201175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 34296980 - 34297065
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  34296980 atgatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 34297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 27851343 - 27851273
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 279  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  27851343 atgatttaccttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatt 27851273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 19399895 - 19399822
Alignment:
Q  66 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  19399895 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatat 19399822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 31630622 - 31630705
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||||| |||| ||| |||| ||||||    
T  31630622 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttataatggttgtattagatgat 31630705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 18927954 - 18927880
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  18927954 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 18927880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 25956717 - 25956856
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| | | ||||||| ||||||| ||| ||| ||| || |||| ||| || | ||    
T  25956717 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgac 25956815  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| |||| ||  ||  ||||||||| ||||||| ||||||    
T  25956816 ttgctgtaaattatttgatgatgttgccttgctgatgtgat 25956856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 18927954 - 18927888
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  18927954 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 18927888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 31630623 - 31630681
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaa 123  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| |||||||    
T  31630623 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaa 31630681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 25956569 - 25956645
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    |||||||| ||||| |||||||||||||| || |||||| | ||||||  ||||||||| ||||| || ||||||||    
T  25956569 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaatgttatat 25956645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 18708746 - 18708704
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  18708746 tgaaagatgttgatatgaagttgtaatggttatattggatgat 18708704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 23151072 - 23151114
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  23151072 tgaaagatgttgatatgaagttgtaatggttatattggatgat 23151114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 27322224 - 27322266
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  27322224 tgaaagatgttgatatgaagttgtaatggttatattggatgat 27322266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 27325487 - 27325533
Alignment:
Q  177 ttaaatgatgttgtcttgctgttgtgataaatatgatttactttgat 223  Q
    |||||||||| | | ||| ||||||||||||||||||||||||||||    
T  27325487 ttaaatgatgctattttgttgttgtgataaatatgatttactttgat 27325533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 88 - 294
Target Start/End: Complemental strand, 46642982 - 46642777
Alignment:
Q  88 aaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgt 187  Q
    |||| ||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  46642982 aaaagatttatatattgtgaaagttgttaatatgaagttgtaattgttacatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgc 46642883  T
Q  188 tgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatt 287  Q
    || |||||||||||||| ||||||||||| |||||| ||| ||||||| || ||||||| | | ||||||||||||||||||||||||||| ||||||||    
T  46642882 tgccttgctgttgtgatgaatatgatttaatttgatgatt-aatgtgagaagatttataaactgtgaaagacgttgatatgaagttgtaatggttatatt 46642784  T
Q  288 tgatgat 294  Q
    |||||||    
T  46642783 tgatgat 46642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 64 - 291
Target Start/End: Complemental strand, 13844711 - 13844485
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||| ||||||||||||||| ||||||| |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| |||||||    
T  13844711 gatttacgttgatgattaaatgtgaaaatatctatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggttac 13844612  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttg 263  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| | ||    
T  13844611 ttgttgtatatgtttaaatgatgttgtcttactgttgtgatgaatatgatttactttgattatt-aatgtgagaatatttatatattgtgaaagatgctg 13844513  T
Q  264 atatgaagttgtaattgttatatttgat 291  Q
    ||||||||||||||| ||| ||||||||    
T  13844512 atatgaagttgtaatggttgtatttgat 13844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 33186241 - 33186101
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| || |||||||| |||| ||    
T  33186241 gatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgac 33186142  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || || ||||||||||||| ||||||| |||||||||    
T  33186141 ttgctgcatttgtttaaatgatgatgtcttgttgttgtgat 33186101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 33186243 - 33186158
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33186243 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgatgat 33186158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 15880836 - 15880717
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||| ||    
T  15880836 gatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 15880737  T
Q  164 ttgttgtatatgtttaaatg 183  Q
    ||| |  |||||| ||||||    
T  15880736 ttgctacatatgtctaaatg 15880717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 15880838 - 15880753
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  15880838 atgatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 15880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 15099457 - 15099351
Alignment:
Q  117 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgattta 216  Q
    ||||||| ||| |||||||||| || |||| ||||| || |||||||||| |||||||||||||| |||||||||||||||| || || ||||||||| |    
T  15099457 atatgaagttgaaattgttatacataaagattattaatgatggttacttgctgtatatgtttaaaagatgttgtcttgctgtcgtaatgaatatgattga 15099358  T
Q  217 ctttgat 223  Q
    |||||||    
T  15099357 ctttgat 15099351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 52873249 - 52873335
Alignment:
Q  207 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  52873249 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 52873335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 362272 - 362189
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||| |||| ||| |||| ||||||    
T  362272 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagacgttgatatgaagttataatggttgtattagatgat 362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 15868765 - 15868877
Alignment:
Q  180 aatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 279  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||| ||| |||| || |||| ||||||||| |||| || | |||||||||||||||||     
T  15868765 aatgatgttgttttgttgttgtgatgaatatgatttactttgatgatt-aatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatg 15868862  T
Q  280 gttatatttgatgat 294  Q
     |||||| |||||||    
T  15868863 attatatctgatgat 15868877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 9923427 - 9923353
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  9923427 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 9923353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 11479432 - 11479506
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  11479432 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 11479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 204
Target Start/End: Original strand, 35812211 - 35812342
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 171  Q
    |||||||||||||||  ||  ||||||||||||||||||| ||| ||||||| ||||||| |||||||  || || |||| ||| || | ||||| || |    
T  35812211 ttgatgattaaatgtggaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 35812309  T
Q  172 tatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    |||  |  |||||||||||||||||||||||||    
T  35812310 tattatctaatgatgttgtcttgctgttgtgat 35812342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 362271 - 362213
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaa 123  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||    
T  362271 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagacgttgatatgaa 362213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 35812211 - 35812285
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||| ||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  35812211 ttgatgattaaatgtggaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 35812285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 52873253 - 52873319
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| |||||||    
T  52873253 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 52873319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 13844712 - 13844636
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    |||||||| ||||| ||||||||||||||||| |||||| | ||||||  ||||||||| ||||| || ||||||||    
T  13844712 tgatttacgttgatgattaaatgtgaaaatatctatataatgtgaaagttgttgatatggagttgcaaatgttatat 13844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 15190424 - 15190360
Alignment:
Q  117 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaa 181  Q
    ||||||| ||| |||||||||| ||||||| ||||| || |||||||||| ||||||||||||||    
T  15190424 atatgaagttgaaattgttatacatgaagattattaatgatggttacttgctgtatatgtttaaa 15190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 9923427 - 9923361
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  9923427 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 9923361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 11479432 - 11479498
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  11479432 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 11479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 630830 - 630942
Alignment:
Q  180 aatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 279  Q
    |||||||||||  || ||||||||| ||||  |||||||||||| ||||| || || |||||| ||||||| |||| || | |||||||||||||||||     
T  630830 aatgatgttgttctgttgttgtgatgaatacaatttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatg 630927  T
Q  280 gttatatttgatgat 294  Q
     || |||||||||||    
T  630928 attgtatttgatgat 630942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 111
Target Start/End: Complemental strand, 14185291 - 14185252
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaaga 111  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  14185291 ttgatggttaaatgtgaaaatatttatatattgtgaaaga 14185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 19609570 - 19609528
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  19609570 tgaaagatgttgatatgaagttgtaatggttatattggatgat 19609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 46642988 - 46642934
Alignment:
Q  229 aatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgtta 283  Q
    |||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||||||    
T  46642988 aatgcgaaaagatttatatattgtgaaagttgttaatatgaagttgtaattgtta 46642934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 13812865 - 13812914
Alignment:
Q  180 aatgatgttgtcttgctgttgtgataaatatgatttactttgataattaa 229  Q
    ||||||||||| ||| ||||||||| |||||||||||||| ||| |||||    
T  13812865 aatgatgttgttttgttgttgtgatgaatatgatttacttagatgattaa 13812914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 14185284 - 14185252
Alignment:
Q  226 ttaaatgtgaaaatatttatatattatgaaaga 258  Q
    ||||||||||||||||||||||||| |||||||    
T  14185284 ttaaatgtgaaaatatttatatattgtgaaaga 14185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 64 - 294
Target Start/End: Original strand, 28194398 - 28194627
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| |||||||    
T  28194398 gatttacgttgatgattaaatgtgaaaaaatctatataatgtgaaagttgttgatatgtagttgcaaatgttatatatgaagattattattgatggttac 28194497  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttg 263  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| ||||    
T  28194498 ttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatattgtgaaagatgttg 28194596  T
Q  264 atatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| ||| |||||||||||    
T  28194597 atatgaagttgtaatggttgtatttgatgat 28194627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 72 - 294
Target Start/End: Complemental strand, 43697537 - 43697316
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 171  Q
    ||||||||||||||| |||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| |||||||||| ||||    
T  43697537 ttgatgattaaatgtgaaaagatctatatagtgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgttggttacttgctgta 43697438  T
Q  172 tatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaag 271  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| | |||| ||||||| ||||||| | ||||||||||    
T  43697437 tatgtttatatgatgctgtcttgctgttgtgataaatatgatttactttgatgatt-aatgtgagattattgatatattgtgaaagatgctgatatgaag 43697339  T
Q  272 ttgtaattgttatatttgatgat 294  Q
    ||||||| ||| |||||||||||    
T  43697338 ttgtaatggttttatttgatgat 43697316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 51274301 - 51274441
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||| || || |||||||| |||| ||    
T  51274301 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtgac 51274400  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || ||||||||||||| | |||| ||| |||||||||    
T  51274401 ttgatgcatatgtttaaatgtttttgttttgttgttgtgat 51274441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 49261448 - 49261342
Alignment:
Q  117 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgattta 216  Q
    ||||||| |||||||||||||| ||||||| |||||||| |||||||||||| ||||||||||||||||  ||||||||||| ||||| |||||||||||    
T  49261448 atatgaagttgtaattgttatacatgaagattattattgatggttacttgttatatatgtttaaatgatactgtcttgctgtcgtgatgaatatgattta 49261349  T
Q  217 ctttgat 223  Q
    |||||||    
T  49261348 ctttgat 49261342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 20636955 - 20636851
Alignment:
Q  119 atgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttact 218  Q
    ||||| |||||||||||||| ||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| ||    
T  20636955 atgaagttgtaattgttatacatgaatattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgattttct 20636856  T
Q  219 ttgat 223  Q
    |||||    
T  20636855 ttgat 20636851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 8885536 - 8885457
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga 143  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  8885536 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgtaatatatga 8885457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 64 - 166
Target Start/End: Original strand, 12328568 - 12328670
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||  |||||||||||||||||| || |||||||| |||| ||    
T  12328568 gatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaattgttatatatgatgattattattgatggtgac 12328667  T
Q  164 ttg 166  Q
    |||    
T  12328668 ttg 12328670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 8885538 - 8885453
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||    
T  8885538 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgtaatatatgatgat 8885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 12328566 - 12328651
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  12328566 atgatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaattgttatatatgatgat 12328651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 51274299 - 51274376
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  51274299 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatat 51274376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 51326974 - 51326907
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51326974 ttgatgattaaatgtgaacatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 51326907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 35981700 - 35981806
Alignment:
Q  117 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgattta 216  Q
    ||||||| ||| |||||||  | ||||||| || || || |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |    
T  35981700 atatgaagttgaaattgttgcacatgaagattactaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgattga 35981799  T
Q  217 ctttgat 223  Q
    |||||||    
T  35981800 ctttgat 35981806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 51326974 - 51326904
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatg 142  Q
    ||||||||||||||| || ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  51326974 ttgatgattaaatgtgaacatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatg 51326904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 43543139 - 43543069
Alignment:
Q  207 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 278  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  43543139 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 43543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 43543135 - 43543069
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| |||||||    
T  43543135 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 43543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 46382652 - 46382733
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||||||| ||||| ||||| |||||||||||  | ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  46382652 tgatttactttgatgattaa-tgtgagaatatttatat--tgtgaaagatgttgatatgaagttgtaatggttttattagatgat 46382733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 28194397 - 28194473
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    |||||||| ||||| |||||||||||||| || |||||| | ||||||  ||||||||| ||||| || ||||||||    
T  28194397 tgatttacgttgatgattaaatgtgaaaaaatctatataatgtgaaagttgttgatatgtagttgcaaatgttatat 28194473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 48301121 - 48301078
Alignment:
Q  240 atttatatattatgaaagacgttgatatgaagttgtaattgtta 283  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  48301121 atttatatattgtgaaagatgttgatatgaagttgtaatggtta 48301078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 43697546 - 43697470
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    |||||||  ||||| |||||||||||||| || |||||| | ||||||  ||||||||| ||||| || ||||||||    
T  43697546 tgatttaagttgatgattaaatgtgaaaagatctatatagtgtgaaagttgttgatatggagttgcaaatgttatat 43697470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 46382653 - 46382717
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | ||||||||||  |||||||||| ||| ||||||| |||||||    
T  46382653 gatttactttgatgattaa-tgtgagaatatttata--ttgtgaaagatgttgatatgaagttgtaat 46382717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 9e-70; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 31 - 204
Target Start/End: Complemental strand, 31415576 - 31415403
Alignment:
Q  31 gagatgaaccaagaagagagagagctgctgatcgatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaa 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||    
T  31415576 gagaagaaccaagaagagagagagctgctgatcgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 31415477  T
Q  131 ttgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||||||||||||| || |||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||    
T  31415476 ttgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgat 31415403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 132 - 294
Target Start/End: Original strand, 18439864 - 18440025
Alignment:
Q  132 tgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaat 231  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||    
T  18439864 tgttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aat 18439962  T
Q  232 gtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||| ||||| |||||||| ||||||| | ||||||||||||||||| ||| |||||||||||    
T  18439963 gtgagaatatctatatattgtgaaagatgatgatatgaagttgtaatggttgtatttgatgat 18440025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 88 - 294
Target Start/End: Complemental strand, 12269718 - 12269513
Alignment:
Q  88 aaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgt 187  Q
    |||| ||||||||||||||||||  ||| ||||||| ||||| || ||| |||||||||||||||| ||||||||||||||||||||||||||||||||     
T  12269718 aaaagatttatatattgtgaaagttgttgatatgaagttgtattttttacatatgaagaatattatcggtggttacttgttgtatatgtttaaatgatgc 12269619  T
Q  188 tgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatt 287  Q
    || ||||||||||| || |||||||||||  ||||| ||| ||||||| || ||||||| ||| |||| ||||||||||||||||||||||  |||||||    
T  12269618 tgccttgctgttgtcatgaatatgatttaagttgatgatt-aatgtgagaagatttataaattttgaaggacgttgatatgaagttgtaatgattatatt 12269520  T
Q  288 tgatgat 294  Q
    |||||||    
T  12269519 tgatgat 12269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 31224669 - 31224807
Alignment:
Q  66 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 165  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| || |||||||| |||| ||||    
T  31224669 tttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgactt 31224768  T
Q  166 gttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    | || ||||||||||||||||||||||||||||||||||    
T  31224769 gctgcatatgtttaaatgatgttgtcttgctgttgtgat 31224807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 49969934 - 49970048
Alignment:
Q  180 aatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 279  Q
    |||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||     
T  49969934 aatgatgttgtcttcctgttgtgatgaatatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatg 49970033  T
Q  280 gttatatttgatgat 294  Q
    |||||||||||||||    
T  49970034 gttatatttgatgat 49970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 15447713 - 15447850
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||   || |||||||| |||| ||    
T  15447713 gatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatatat---gattattattgatggtgac 15447809  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || ||||||||||||||||||||||||||||||||||    
T  15447810 ttgatgcatatgtttaaatgatgttgtcttgctgttgtgat 15447850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 165 - 294
Target Start/End: Original strand, 20630147 - 20630275
Alignment:
Q  165 tgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttga 264  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  ||| ||||||| |||||||||||||| ||||||| |||||    
T  20630147 tgttgtatatgtttaaatgatgttgtcttgctgttgtaatgaatatgatttactttgacgatt-aatgtgagaatatttatatattgtgaaagatgttga 20630245  T
Q  265 tatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||||||| ||| |||| ||||||    
T  20630246 tatgaagttgtaatggttgtattagatgat 20630275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 11913060 - 11912921
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | |||||||| || | ||    
T  11913060 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgac 11912961  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtga 203  Q
    ||| || ||||  || |||| ||||| ||||| |||||||    
T  11912960 ttgatgcatattatttaatggtgttgccttgcggttgtga 11912921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 6808276 - 6808175
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | || |||||||| |||| ||    
T  6808276 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatataatgattattattgatggtgac 6808177  T
Q  164 tt 165  Q
    ||    
T  6808176 tt 6808175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 31415543 - 31415460
Alignment:
Q  211 gatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  31415543 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 31415460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 11913062 - 11912980
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 291  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  11913062 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 11912980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 6808278 - 6808201
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  6808278 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatat 6808201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 31224669 - 31224750
Alignment:
Q  213 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||    
T  31224669 tttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 31224750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 15447711 - 15447793
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 291  Q
    ||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  15447711 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatatatgat 15447793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 1465423 - 1465529
Alignment:
Q  117 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgattta 216  Q
    ||||||| ||| |||||||||| ||||||| ||||| || |||||||||| | ||||||||||||||||||||||||||||  ||||| ||||||||| |    
T  1465423 atatgaagttgaaattgttatacatgaagattattaatgatggttacttgctctatatgtttaaatgatgttgtcttgctgccgtgatgaatatgattga 1465522  T
Q  217 ctttgat 223  Q
    |||||||    
T  1465523 ctttgat 1465529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 49969965 - 49970105
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| ||||||| ||||||| ||| || |||| ||| || | ||    
T  49969965 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgac 49970064  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || ||||  || |||| |  || ||||||||||||||    
T  49970065 ttgctgcatattatttaatggtactgccttgctgttgtgat 49970105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 49389644 - 49389740
Alignment:
Q  118 tatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatt 214  Q
    |||||| ||| |||||||||| |||||||  ||||||  ||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  49389644 tatgaagttgaaattgttatacatgaagatcattattaatgggtacttattgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgatt 49389740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 49389772 - 49389848
Alignment:
Q  219 ttgataattaaatgtgaaaatattta--tatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| ||||||||||||||||||||  |||||| |||| |  |||||||||||||||||||||||||||||||||||    
T  49389772 ttgatgattaaatgtgaaaatatttagatatattgtgaa-gttgttgatatgaagttgtaattgttatatttgatgat 49389848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 1988944 - 1989028
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| || ||||| |||||||||||||| || |||||| | ||||||  ||||||||||||||||||| ||| |||||||||||    
T  1988944 tgattcacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgaagttgtaatggttgtatttgatgat 1989028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 20630193 - 20630259
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    |||||||||||| |||||| ||| | |||||||||||||||||||||| ||| ||||||| |||||||    
T  20630193 gatttactttgacgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 20630259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 40812096 - 40812050
Alignment:
Q  240 atttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 40812050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 18439943 - 18440009
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||||| | | ||||||| |||||||    
T  18439943 gatttactttgatgattaa-tgtgagaatatctatatattgtgaaagatgatgatatgaagttgtaat 18440009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 204
Target Start/End: Original strand, 49389772 - 49389905
Alignment:
Q  72 ttgatgattaaatgttaaaatattt--atatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttg 169  Q
    ||||||||||||||| |||||||||  |||||||||| |||  ||| ||||||| ||||||||||||||| ||| || |||| ||| || | ||||| ||    
T  49389772 ttgatgattaaatgtgaaaatatttagatatattgtg-aagttgttgatatgaagttgtaattgttatatttgatgattattgttgatgttgacttgctg 49389870  T
Q  170 tatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    || ||  ||  ||| ||||| ||||||| ||||||    
T  49389871 taaattatttgatggtgttgccttgctgatgtgat 49389905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 5842039 - 5841985
Alignment:
Q  240 atttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||| ||||||| | | ||| ||||||||||| |||||||||||||||    
T  5842039 atttatatattgtgaaagatgctcataagaagttgtaatggttatatttgatgat 5841985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 30175304 - 30175346
Alignment:
Q  236 aaatatttatatattatgaaagacgttgatatgaagttgtaat 278  Q
    ||||||||||||| | ||||||| |||||||||||||||||||    
T  30175304 aaatatttatatactgtgaaagatgttgatatgaagttgtaat 30175346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 40807242 - 40807200
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  40807242 tgaaagatgttgatatgaagttgtaatggttatattggatgat 40807200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 40812096 - 40812050
Alignment:
Q  93 atttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 40812050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 131; Significance: 6e-68; HSPs: 5)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 64 - 294
Target Start/End: Original strand, 43733 - 43962
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| |||||||    
T  43733 gatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggttac 43832  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttg 263  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| | ||    
T  43833 ttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatattgtgaaagatgctg 43931  T
Q  264 atatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| ||| |||||||||||    
T  43932 atatgaagttgtaatggttgtatttgatgat 43962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 64 - 249
Target Start/End: Original strand, 47653 - 47837
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| |||||||    
T  47653 gatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaaatgttatatatgaagattattattgatggttac 47752  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatat 249  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||    
T  47753 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatat 47837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 43880 - 44019
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| | | ||||||| ||||||| ||| ||| ||| || |||| ||| || | ||    
T  43880 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgac 43978  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| |||| ||  ||  ||||||||| ||||||| ||||||    
T  43979 ttgctgtaaattatttgatgatgttgccttgctgatgtgat 44019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 43732 - 43808
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    |||||||| ||||| |||||||||||||| || |||||| | ||||||  ||||||||| ||||| || ||||||||    
T  43732 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaatgttatat 43808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 47652 - 47728
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    |||||||| ||||| |||||||||||||| || |||||| | ||||||  ||||||||| ||||| || ||||||||    
T  47652 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaaatgttatat 47728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 31 - 204
Target Start/End: Complemental strand, 38480409 - 38480236
Alignment:
Q  31 gagatgaaccaagaagagagagagctgctgatcgatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaa 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||    
T  38480409 gagaagaaccaagaagagagagagctgctgatcgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 38480310  T
Q  131 ttgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||||||||||||| || |||||||| |||| ||||| || |||| |||||||||||||||||||||||||||||    
T  38480309 ttgttatatatgatgattattattgatggtgacttgctgcatatatttaaatgatgttgtcttgctgttgtgat 38480236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 294
Target Start/End: Complemental strand, 17232725 - 17232564
Alignment:
Q  132 tgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaat 231  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| ||| |||    
T  17232725 tgttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgatgatgtcatgctgttgtgatgaatatgatttactttgatgatt-aat 17232627  T
Q  232 gtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||| |||||||||||||| ||||||| ||||||||||||||| ||| ||| |||| ||||||    
T  17232626 gtgagaatatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgat 17232564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 30820971 - 30821109
Alignment:
Q  66 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| || |||||||| |||| ||||    
T  30820971 tttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaattgttatatatgatgattattattgatggtaactt 30821070  T
Q  166 gttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    | || |||||||||||||||||||||||| |||||||||    
T  30821071 gctgcatatgtttaaatgatgttgtcttgttgttgtgat 30821109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 36685965 - 36686103
Alignment:
Q  66 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| || |||||||||||||||| || |||||||| |||| ||||    
T  36685965 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattgttatatatgatgattattattgatggtgactt 36686064  T
Q  166 gttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    | || ||||||||||||||||||||||||||||||||||    
T  36686065 gctgcatatgtttaaatgatgttgtcttgctgttgtgat 36686103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 9320442 - 9320567
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||| ||    
T  9320442 gatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 9320541  T
Q  164 ttgttgtatatgtttaaatgatgttg 189  Q
    |||||| |||||| |||||| |||||    
T  9320542 ttgttgcatatgtctaaatggtgttg 9320567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 11092876 - 11092751
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||| |||| ||    
T  11092876 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 11092777  T
Q  164 ttgttgtatatgtttaaatgatgttg 189  Q
    |||||| ||| ||||||||| |||||    
T  11092776 ttgttgcatacgtttaaatggtgttg 11092751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 132 - 294
Target Start/End: Complemental strand, 8468524 - 8468370
Alignment:
Q  132 tgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaat 231  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||| ||||| |    
T  8468524 tgttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgat-------tgctgttgtgatgaatatgatttactttgatgattaa-t 8468433  T
Q  232 gtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  8468432 gtgataatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 8468370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 11085138 - 11085013
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||| ||    
T  11085138 gatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 11085039  T
Q  164 ttgttgtatatgtttaaatgatgttg 189  Q
    ||| || ||| | ||||||| |||||    
T  11085038 ttgctgcatacgattaaatggtgttg 11085013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 15213838 - 15213699
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || |||||||| || | ||    
T  15213838 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaattgttatatatgatgattattattgatgttgac 15213739  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtga 203  Q
    ||| || ||||  || |||| ||||| ||||| |||||||    
T  15213738 ttgctgcatattatttaatggtgttgccttgcggttgtga 15213699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 38480376 - 38480293
Alignment:
Q  211 gatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  38480376 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 38480293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 9320440 - 9320525
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  9320440 atgatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 9320525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 11085140 - 11085055
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  11085140 atgatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 11085055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 11092878 - 11092793
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||    
T  11092878 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaattgttatatatgatgat 11092793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 15213840 - 15213755
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| |||||||    
T  15213840 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaattgttatatatgatgat 15213755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 30820971 - 30821052
Alignment:
Q  213 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  30820971 tttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaattgttatatatgatgat 30821052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 9389709 - 9389815
Alignment:
Q  117 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgattta 216  Q
    ||||||| ||| ||||| |||| ||||||| ||||| || |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |    
T  9389709 atatgaagttgaaattgatatacatgaagattattaatgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgattga 9389808  T
Q  217 ctttgat 223  Q
    |||||||    
T  9389809 ctttgat 9389815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 36685965 - 36686046
Alignment:
Q  213 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||    
T  36685965 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattgttatatatgatgat 36686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 15439424 - 15439318
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||| ||||||||||||||| |||| || ||||   ||||||||  ||| ||||||| |||||||||||||||||||||| |||||||| |||||||    
T  15439424 gatttacgttgatgattaaatgtgaaaagatctatactatgtgaaagttgttgatatgaagttgtaattgttatatatgaagattattattgatggttac 15439325  T
Q  164 ttgttgt 170  Q
    |||||||    
T  15439324 ttgttgt 15439318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 14270136 - 14270222
Alignment:
Q  207 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  14270136 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 14270222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 45847735 - 45847818
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  45847735 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 45847818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 8468452 - 8468313
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| ||||||| ||| |||  || || |||| ||| || | ||    
T  8468452 gatttactttgatgattaa-tgtgataatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 8468354  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| |||| ||  || |||| ||||| ||||||| ||||||    
T  8468353 ttgctgtaaattatttaatggtgttgccttgctgatgtgat 8468313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 14270140 - 14270206
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| |||||||    
T  14270140 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 14270206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 45847736 - 45847802
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| |||||||    
T  45847736 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 45847802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 37727642 - 37727723
Alignment:
Q  213 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| ||||| |||||||||||||| || |||||| | ||||||  || |||||||||||||||| ||| |||||||||||    
T  37727642 tttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgtagatatgaagttgtaatggttgtatttgatgat 37727723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 15439425 - 15439349
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    |||||||| ||||| |||||||||||||| || ||||   | ||||||  |||||||||||||||||||||||||||    
T  15439425 tgatttacgttgatgattaaatgtgaaaagatctatactatgtgaaagttgttgatatgaagttgtaattgttatat 15439349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 17232646 - 17232507
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| ||| ||| ||| |||  || || |||| ||| || | ||    
T  17232646 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgattattgttgctgttgac 17232548  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| |||||||  ||  ||| ||||| ||||||| ||||||    
T  17232547 ttgctgtatattatttgatggtgttgccttgctgatgtgat 17232507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 32434394 - 32434438
Alignment:
Q  250 tatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||    
T  32434394 tatgaaagatgttgatatgaagttgtaatggttatattggatgat 32434438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 11066714 - 11066672
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  11066714 tgaaagatgttgatatgaagttgtaatagttatattggatgat 11066672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 12371524 - 12371482
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  12371524 tgaaagatgttgatatgaagttgtaatggttatattggatgat 12371482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 13148278 - 13148320
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  13148278 tgaaagatgttgatatgaagttgtaatggttatattagatgat 13148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 294
Target Start/End: Complemental strand, 18302207 - 18302111
Alignment:
Q  196 tgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||| |||||||||||||||||| ||| | || || |||| ||||||||| || | || | |||||||||||||||||  || |||||||||||    
T  18302207 tgttgtgatgaatatgatttactttgatgatt-attgagagaata-ttatatattgtggatgaagatgatatgaagttgtaatgattgtatttgatgat 18302111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 8e-61; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 64 - 294
Target Start/End: Original strand, 5889125 - 5889353
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  ||| ||||| | ||| |||||||||| ||||||| |||||||| |||||||    
T  5889125 gatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaattgttatacatgaagattattattgatggttac 5889224  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttg 263  Q
    ||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| | ||    
T  5889225 ttgctgtatatgtttaaatgatgttgtctt-ctgtcgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatattgtgaaagatgctg 5889322  T
Q  264 atatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| ||| |||||||||||    
T  5889323 atatgaagttgtaatggttgtatttgatgat 5889353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 12122234 - 12122374
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||| |||| ||    
T  12122234 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgac 12122333  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    |||  | |||||||||||||||| |||||||||||||||||    
T  12122334 ttgcggcatatgtttaaatgatgatgtcttgctgttgtgat 12122374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 21555094 - 21555232
Alignment:
Q  66 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 165  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| | || || ||||||||||||||||||| || |||||||| |||| ||||    
T  21555094 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaattgttatatatgatgattattattgatggtgactt 21555193  T
Q  166 gttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    | || ||||||||||||||||||||||||||||||||||    
T  21555194 gctgcatatgtttaaatgatgttgtcttgctgttgtgat 21555232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 21557760 - 21557898
Alignment:
Q  66 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 165  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||| | || ||||    
T  21557760 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatagtgactt 21557859  T
Q  166 gttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    | || ||||||||||||||||||||||||||||| ||||    
T  21557860 gctgcatatgtttaaatgatgttgtcttgctgttatgat 21557898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 24212507 - 24212382
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || || ||||| |||| ||    
T  24212507 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattaatattgatggtgac 24212408  T
Q  164 ttgttgtatatgtttaaatgatgttg 189  Q
    ||| || |||||| ||||||||||||    
T  24212407 ttgctgcatatgtctaaatgatgttg 24212382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 31455830 - 31455689
Alignment:
Q  66 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga---agaatattattggtggtta 162  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||| |||||| ||||    || |||||||| |||| |    
T  31455830 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaatcgttataaatgatattgattattattgatggtga 31455731  T
Q  163 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    |||| || ||||||||||||||||||||||||||||||||||    
T  31455730 cttgctgcatatgtttaaatgatgttgtcttgctgttgtgat 31455689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 36460309 - 36460170
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||  || | ||    
T  36460309 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattaatgttgac 36460210  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtga 203  Q
    ||| || ||||  || |||| ||||||||||| |||||||    
T  36460209 ttgctgcatattatttaatggtgttgtcttgcggttgtga 36460170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 35852762 - 35852637
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| || || |||||||| ||||  |    
T  35852762 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatacgatgattattattgatggtggc 35852663  T
Q  164 ttgttgtatatgtttaaatgatgttg 189  Q
    ||| || |||||| |||||| |||||    
T  35852662 ttgctgcatatgtctaaatggtgttg 35852637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 31455217 - 31455076
Alignment:
Q  66 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga---agaatattattggtggtta 162  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| || ||||||| |||||| ||||    || |||||||| |||| |    
T  31455217 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgtaatcgttataaatgatattgattattattgatggtga 31455118  T
Q  163 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    |||| || ||||||||||||||||||||||||||||||||||    
T  31455117 cttgatgcatatgtttaaatgatgttgtcttgctgttgtgat 31455076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 12122232 - 12122317
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  12122232 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 12122317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 24212509 - 24212424
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  24212509 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 24212424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 36460311 - 36460226
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  36460311 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 36460226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 200
Target Start/End: Complemental strand, 30615893 - 30615759
Alignment:
Q  65 atttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttact 164  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||||||  ||| || ||||| || |||| |||    
T  30615893 atttacttttatgattaaatgtgaaaatatt-atatattgtgaaagacgttgatatgaagttgtaattgttataattgatgattattaatgatggtgact 30615795  T
Q  165 tgttgtatatgtttaaatgatgttgtcttgctgttg 200  Q
    || || ||||||||||| |||| |||||||||||||    
T  30615794 tgctgcatatgtttaaacgatgatgtcttgctgttg 30615759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 21557760 - 21557841
Alignment:
Q  213 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  21557760 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 21557841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 35852764 - 35852687
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  35852764 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatat 35852687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 21741557 - 21741651
Alignment:
Q  129 aattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgat 223  Q
    |||||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| | ||||||    
T  21741557 aattgttatacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatgtatatgattgaatttgat 21741651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 29915150 - 29915251
Alignment:
Q  192 ttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 291  Q
    ||||||||||||| |||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| |||    
T  29915150 ttgctgttgtgatgaatatgatctactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagat 29915248  T
Q  292 gat 294  Q
    |||    
T  29915249 gat 29915251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 30615893 - 30615812
Alignment:
Q  212 atttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  30615893 atttacttttatgattaaatgtgaaaatatt-atatattgtgaaagacgttgatatgaagttgtaattgttataattgatgat 30615812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 203
Target Start/End: Complemental strand, 17875331 - 17875214
Alignment:
Q  86 ttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgat 185  Q
    |||| ||||||||||| ||  ||||||||| ||||||| || |||||||||||||||| || |||||||| |||| ||||| || |||||||||||||||    
T  17875331 ttaagatatttatataatgataaagacgttgatatgaagttctaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgat 17875232  T
Q  186 gttgtcttgctgttgtga 203  Q
     || ||||||||||||||    
T  17875231 attatcttgctgttgtga 17875214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 21555094 - 21555175
Alignment:
Q  213 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| |||||||    
T  21555094 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaattgttatatatgatgat 21555175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 31455830 - 31455758
Alignment:
Q  213 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttata 285  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  31455830 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaatcgttata 31455758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 31455217 - 31455145
Alignment:
Q  213 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttata 285  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||||    
T  31455217 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgtaatcgttata 31455145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 21871627 - 21871739
Alignment:
Q  180 aatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 279  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||  ||| |||| || |||| ||||||||| |||| || | |||||||||||||||||     
T  21871627 aatgatgctgtcttgttgttgtgatgaatatgatttactttgacgatt-aatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatg 21871724  T
Q  280 gttatatttgatgat 294  Q
     || |||||||||||    
T  21871725 attgtatttgatgat 21871739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 21875907 - 21876019
Alignment:
Q  180 aatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 279  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||  ||| |||| || |||| ||||||||| |||| || | |||||||||||||||||     
T  21875907 aatgatgctgtcttgttgttgtgatgaatatgatttactttgacgatt-aatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatg 21876004  T
Q  280 gttatatttgatgat 294  Q
     || |||||||||||    
T  21876005 attgtatttgatgat 21876019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 5889271 - 5889410
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| | | ||||||| ||||||| ||| ||| ||| || |||| ||| || | ||    
T  5889271 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgac 5889369  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| |||| ||  ||  ||| ||||| ||||||| ||||||    
T  5889370 ttgctgtaaattatttgatggtgttgccttgctgatgtgat 5889410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 285
Target Start/End: Original strand, 5889124 - 5889199
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttata 285  Q
    |||||||| ||||| |||||||||||||| || |||||| | ||||||  ||||||||| ||||| ||||||||||    
T  5889124 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaattgttata 5889199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 29915173 - 29915235
Alignment:
Q  68 tactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| |||||||    
T  29915173 tactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 29915235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 17875326 - 17875270
Alignment:
Q  238 atatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||| |   |||||||||||||||||||| |||||||||||| |||||||    
T  17875326 atatttatataatgataaagacgttgatatgaagttctaattgttatatatgatgat 17875270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 132 - 294
Target Start/End: Complemental strand, 85352 - 85191
Alignment:
Q  132 tgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaat 231  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| |||    
T  85352 tgttatatatgaagattattattgatggttacttgatgtatatgtttaaatgaagttgtcttgctgttgtgatgaatatgatttactttgatgatt-aat 85254  T
Q  232 gtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||    
T  85253 gtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatagttgtatttgatgat 85191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 85273 - 85207
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| |||||||    
T  85273 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 85207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 6391 - 6531
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||| ||    
T  6391 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 6490  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || ||||||||||||| |||||||||||| |||||||    
T  6491 ttgctgcatatgtttaaatggtgttgtcttgctattgtgat 6531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 6389 - 6474
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  6389 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 6474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 5e-50; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 21579919 - 21580059
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  | |||||||| |||| ||    
T  21579919 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgataattattattgatggtgac 21580018  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || ||||||||||||||||||||||||||||||||||    
T  21580019 ttgctgcatatgtttaaatgatgttgtcttgctgttgtgat 21580059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 29763581 - 29763720
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||| | |||| |     
T  29763581 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga- 29763679  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || |||||||||||||||| |||||||||||||||||    
T  29763680 ttgctgcatatgtttaaatgatgatgtcttgctgttgtgat 29763720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 32807396 - 32807279
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 171  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||| ||||| || |    
T  32807396 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgca 32807297  T
Q  172 tatgtttaaatgatgttg 189  Q
    ||||| |||||| |||||    
T  32807296 tatgtctaaatggtgttg 32807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 72 - 204
Target Start/End: Original strand, 41680843 - 41680975
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 171  Q
    ||||||||||||||| ||||||||||||||||||||||||  || |||| |||||||||||||||||||||| || |||||||| |||| ||||| || |    
T  41680843 ttgatgattaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaattgttatatatgatgattattattgatggtgacttgctgca 41680942  T
Q  172 tatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    |||||||||||| || ||||||| |||||||||    
T  41680943 tatgtttaaatggtgatgtcttgttgttgtgat 41680975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 29763579 - 29763664
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  29763579 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 29763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 42560240 - 42560331
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattg 155  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||    
T  42560240 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaattgttatatatgatgattattattg 42560331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 21579917 - 21579999
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 291  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  21579917 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 21579999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 42560238 - 42560323
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||    
T  42560238 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaattgttatatatgatgat 42560323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 32807396 - 32807321
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  32807396 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 32807321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 39834012 - 39833870
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattg-ttatatatgaagaatattattggtggtta 162  Q
    ||||||| ||||||||||||||| |||| || ||||||  ||||| |  ||| ||||||| ||| || || ||||||||||||| |||||||| ||||||    
T  39834012 gatttacgttgatgattaaatgtgaaaagatctatataacgtgaatgttgttgatatgaagttgcaaatggttatatatgaagattattattgatggtta 39833913  T
Q  163 cttgttgtatatgtttaaatgatg-ttgtcttgctgttgtgat 204  Q
    || | ||||||||||||||||||| ||| ||||||| ||||||    
T  39833912 ctcgctgtatatgtttaaatgatgattgccttgctgatgtgat 39833870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 18760660 - 18760591
Alignment:
Q  225 attaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||| |||| |||||||||||||||    
T  18760660 attaaatgtgaaaagatttatatattgtgaaagatgttgatatgaagttataatggttatatttgatgat 18760591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 41680833 - 41680918
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||  ||||| |||||||||||||||||||||||||| |||||||  ||||||| || ||||||||||||||| |||||||    
T  41680833 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaattgttatatatgatgat 41680918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 27472391 - 27472474
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  27472391 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 27472474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 38550086 - 38550169
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  38550086 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 38550169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 1327117 - 1327203
Alignment:
Q  207 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| |||| || ||||||||||||||||||| ||| |||| ||||||    
T  1327117 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaatggttgtattagatgat 1327203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 38550087 - 38550226
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| ||||||| ||| |||  || || |||| ||| || | ||    
T  38550087 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 38550185  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| |||| ||  ||  ||| ||||||||||||| ||||||    
T  38550186 ttgctgtaaattatttgatggtgttgtcttgctgatgtgat 38550226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 27472392 - 27472458
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| |||||||    
T  27472392 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 27472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 204
Target Start/End: Complemental strand, 18760664 - 18760534
Alignment:
Q  74 gatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtata 173  Q
    ||||||||||||| |||| ||||||||||||||||||| ||| ||||||| || |||| ||||||| ||| || |||| ||| || | ||||| || |||    
T  18760664 gatgattaaatgtgaaaagatttatatattgtgaaagatgttgatatgaagttataatggttatatttgatgattattgttgatgttgacttgctgcata 18760565  T
Q  174 tgtttaaatgatgttgtcttgctgttgtgat 204  Q
    |  || |||| || || |||||| |||||||    
T  18760564 ttatttaatggtgatgccttgctattgtgat 18760534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 1327121 - 1327187
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||| || ||| ||||||| |||||||    
T  1327121 gatttactttgatgattaa-tgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaat 1327187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 19140011 - 19139969
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  19140011 tgaaagatgttgatatgaagttgtaatggttatattggatgat 19139969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 39936816 - 39936858
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  39936816 tgaaagatgttgatatgaagttgtaatggttatattggatgat 39936858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 20982747 - 20982803
Alignment:
Q  238 atatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||| |||||||| |||||||  |||||||||||||||||| ||| |||| ||||||    
T  20982747 atatatatatattgtgaaagatattgatatgaagttgtaatggttgtattagatgat 20982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 22965804 - 22965748
Alignment:
Q  148 tattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    |||||||| |||| | ||| || ||||||||||||| ||||||||||||||| ||||    
T  22965804 tattattgatggtgatttgatgcatatgtttaaatggtgttgtcttgctgttatgat 22965748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 1705 - 1565
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| || || |||||||| |||| ||    
T  1705 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtgac 1606  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || |||||||||||||||||||||||| |||||||||    
T  1605 ttgatgcatatgtttaaatgatgttgtcttgttgttgtgat 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 1707 - 1630
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1707 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatat 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 14479 - 14339
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||| |||||||||||||||| || || |||||||| |||| ||    
T  14479 gatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtgac 14380  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || ||||||||||||||||||||||||||||||||||    
T  14379 ttgatgcatatgtttaaatgatgttgtcttgctgttgtgat 14339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 14481 - 14404
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  14481 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatat 14404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 24865483 - 24865623
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||| || || |||||||| |||| ||    
T  24865483 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtgac 24865582  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || |||||||||||||||||||||||||| |||||||    
T  24865583 ttgatgcatatgtttaaatgatgttgtcttgctattgtgat 24865623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 22501128 - 22500988
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||| || || || ||||| |||| ||    
T  22501128 gatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggtaac 22501029  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || |||||||||||||||| ||||||||| |||||||    
T  22501028 ttgctgcatatgtttaaatgatgctgtcttgctattgtgat 22500988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 22509062 - 22508922
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||| || || || ||||| |||| ||    
T  22509062 gatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggtaac 22508963  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || |||||||||||||||| ||||||||| |||||||    
T  22508962 ttgctgcatatgtttaaatgatgctgtcttgctattgtgat 22508922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 7672271 - 7672405
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||      | |||||||||| || || |||||||| |||| ||    
T  7672271 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatga------agttgttatataagatgattattattgatggtgac 7672364  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || ||| |||||||||||| |||||||||||||||||    
T  7672365 ttgatgcatacgtttaaatgatgctgtcttgctgttgtgat 7672405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 22501130 - 22501053
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22501130 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22501053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 22509064 - 22508987
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22509064 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22508987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 24865481 - 24865558
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  24865481 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatat 24865558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 2524442 - 2524521
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga 143  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  2524442 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatcaaattgtaattgttacatatga 2524521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 2524440 - 2524525
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| || |||||||    
T  2524440 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatcaaattgtaattgttacatatgatgat 2524525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 7672269 - 7672335
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgt 275  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7672269 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgt 7672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 6576505 - 6576430
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  6576505 ttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgat 6576430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 6576505 - 6576373
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 171  Q
    |||||||||||| || |||| ||||||||||||||||||| ||| ||||||| ||||||| ||||||| ||| || |||| ||| || | ||||| || |    
T  6576505 ttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacttgctgca 6576406  T
Q  172 tatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    |||  || |||| || || |||||| |||||||    
T  6576405 tattatttaatggtgctgccttgctattgtgat 6576373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 22501195 - 22501147
Alignment:
Q  238 atatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22501195 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 22509129 - 22509081
Alignment:
Q  238 atatttatatattatgaaagacgttgatatgaagttgtaattgttatat 286  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22509129 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22509081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 24883713 - 24883657
Alignment:
Q  238 atatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  24883713 atatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 24883657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 22501200 - 22501146
Alignment:
Q  86 ttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatata 140  Q
    |||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  22501200 ttaagatatttatataatgtgaaagacgttgatatgaagttgtaattgttatata 22501146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 22509134 - 22509080
Alignment:
Q  86 ttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatata 140  Q
    |||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  22509134 ttaagatatttatataatgtgaaagacgttgatatgaagttgtaattgttatata 22509080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 24436321 - 24436258
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgtta 136  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  24436321 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaaattgtaatggtta 24436258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 24436321 - 24436247
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||  ||||||||||| ||||||| ||||||||||| ||||||| |||| ||| ||||||    
T  24436321 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaaattgtaatggttacattggatgat 24436247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 24883713 - 24883665
Alignment:
Q  91 atatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  24883713 atatttatatattgtgaaagatgttgatatgaagttgtaatggttatat 24883665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 11034 - 10894
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| || |||||||||||||||| || |||||||| | || ||    
T  11034 gatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaattgttatatatgatgattattattgattgtgac 10935  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| || ||||||||||||||||||||||||||||| ||||    
T  10934 ttgctgcatatgtttaaatgatgttgtcttgctgttttgat 10894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 11036 - 10951
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  11036 atgatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaattgttatatatgatgat 10951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 611 - 483
Alignment:
Q  76 tgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatg 175  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || |||||||| |||| ||||| || |||||    
T  611 tgattaaatgagaaaatatttatatattgtgaaagacgttgatatgaaattataattgttatatatgatgattattattgatggtgacttgctgcatatg 512  T
Q  176 tttaaatgatgttgtcttgctgttgtgat 204  Q
    || ||||||||||||||||||||||||||    
T  511 ttaaaatgatgttgtcttgctgttgtgat 483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 609 - 540
Alignment:
Q  225 attaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  609 attaaatgagaaaatatttatatattgtgaaagacgttgatatgaaattataattgttatatatgatgat 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 4754 - 4615
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | |||||||| || | ||    
T  4754 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgac 4655  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtga 203  Q
    ||| || ||||  || |||| ||||| ||||| |||||||    
T  4654 ttgatgcatattatttaatggtgttgccttgcggttgtga 4615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 336 - 197
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 163  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | |||||||| || | ||    
T  336 gatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgac 237  T
Q  164 ttgttgtatatgtttaaatgatgttgtcttgctgttgtga 203  Q
    ||| || ||||  || |||| ||||| ||||| |||||||    
T  236 ttgatgcatattatttaatggtgttgccttgcggttgtga 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 4756 - 4674
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 291  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  4756 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 338 - 256
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 291  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  338 atgatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 6770 - 6855
Alignment:
Q  209 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||    
T  6770 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaatgattatatttgatgat 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 6772 - 6839
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||||    
T  6772 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaat 6839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 2304 - 2410
Alignment:
Q  117 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgataaatatgattta 216  Q
    ||||||| ||| ||||||| || ||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |    
T  2304 atatgaagttgaaattgttgtacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgctgtcttgctgtcgtgatgaatatgattga 2403  T
Q  217 ctttgat 223  Q
    |||||||    
T  2404 ctttgat 2410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 36140 - 36226
Alignment:
Q  207 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  36140 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatattagatgat 36226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 36144 - 36218
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  36144 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatat 36218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 5e-19; HSPs: 4)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 15439 - 15523
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||  ||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||  ||||||||||| ||||||    
T  15439 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcgatgat 15523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 24497 - 24581
Alignment:
Q  210 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    |||||||  ||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||  ||||||||||| ||||||    
T  24497 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcgatgat 24581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 15448 - 15515
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||| |||||||||||||||||||||| | ||| ||||||| |||  ||||||||||    
T  15448 ttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatat 15515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 24506 - 24573
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||| |||||||||||||||||||||| | ||| ||||||| |||  ||||||||||    
T  24506 ttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatat 24573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 59327 - 59401
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  59327 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaattgttatattggatgat 59401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 204
Target Start/End: Original strand, 59327 - 59458
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 171  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||| ||||||| |||||||||||||||  || || |||| ||| || | ||||| || |    
T  59327 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaattgttatattggatgattattgttgatgttgacttgctgca 59425  T
Q  172 tatgtttaaatgatgttgtcttgctgttgtgat 204  Q
    ||| ||| |||| ||||| |||||||| |||||    
T  59426 tattttttaatggtgttgccttgctgtcgtgat 59458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 363033 - 362964
Alignment:
Q  208 tatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 278  Q
    |||||||||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  363033 tatgatttactttgatgattaa-tgtgagaatatttatatattttgaaagatgttgatatgaagttgtaat 362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 363030 - 362964
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||||| ||| | |||||||||||||| ||||||| ||| ||||||| |||||||    
T  363030 gatttactttgatgattaa-tgtgagaatatttatatattttgaaagatgttgatatgaagttgtaat 362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 3053 - 2988
Alignment:
Q  229 aatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||    
T  3053 aatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgat 2988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 3063 - 3004
Alignment:
Q  71 tttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    |||||||||||| ||| | |||||||||||||||||||||| ||| ||||||| |||||||    
T  3063 tttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 3004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 10961 - 11047
Alignment:
Q  207 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||||||||||| ||| | ||||| |||||||||||||| | ||||| ||||||||||||||||||| ||| |||| ||||||    
T  10961 atatgatttactttgatgattta-tgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaatggttgtattagatgat 11047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 10965 - 11031
Alignment:
Q  64 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 131  Q
    ||||||||||||||||| | ||| | |||||||||||||||| ||||| ||| ||||||| |||||||    
T  10965 gatttactttgatgattta-tgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaat 11031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 8350 - 8462
Alignment:
Q  180 aatgatgttgtcttgctgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 279  Q
    ||||||| ||||||| ||| ||||| |||||||||||||||||| ||| |||| || |||| ||||||||| |||| || | |||||||||||||||||     
T  8350 aatgatgctgtcttgttgtcgtgatgaatatgatttactttgatgatt-aatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatg 8447  T
Q  280 gttatatttgatgat 294  Q
     || |||||||||||    
T  8448 attgtatttgatgat 8462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 77019 - 76946
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||||  ||||||||| ||||||| || |||||||||||||||| |||||||| ||||||    
T  77019 ttgatgattaaatgtgaaaat--ttatatattgtgaaagatgtggatatgaagttgtaatggttatattggatgat 76946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 77019 - 76954
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||  ||||||| ||||||| |||||||    
T  77019 ttgatgattaaatgtgaaaat--ttatatattgtgaaagatgtggatatgaagttgtaatggttatat 76954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 935 - 861
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||  ||| ||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  935 ttgatgattaaatgtgaaag-attaatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 861  T

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Target: scaffold0335; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 935 - 869
Alignment:
Q  72 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 139  Q
    ||||||||||||||| |||  ||| ||||||||||||||| ||| ||||||| ||||||| |||||||    
T  935 ttgatgattaaatgtgaaag-attaatatattgtgaaagatgttgatatgaagttgtaatggttatat 869  T

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Target: scaffold0802 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 5478 - 5552
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||  ||||||||||| ||||||  |||||||||||||||||||  ||||||| ||||||    
T  5478 ttgatgattaaatgtgaaag-atttatatattgtgaaaggtgttgatatgaagttgtaatgtttatattggatgat 5552  T

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Target: scaffold0371 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 3194 - 3120
Alignment:
Q  219 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||| |||||||||||||  ||||||||||  ||||| | ||||||||||||||||||| |||||||| ||||||    
T  3194 ttgatgattaaatgtgaaag-atttatatatcgtgaaaaatgttgatatgaagttgtaatggttatattggatgat 3120  T

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Target: scaffold0384 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 8192 - 8234
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  8192 tgaaagatgttgatatgaagttgtaatggttatattggatgat 8234  T

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Target: scaffold0375 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 9108 - 9150
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  9108 tgaaagatgttgatatgaagttgtaatggttatattggatgat 9150  T

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Target: scaffold0134 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 10032 - 10074
Alignment:
Q  252 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  10032 tgaaagatgttgatatgaagttgtaatggttatattggatgat 10074  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 294
Target Start/End: Original strand, 24726 - 24822
Alignment:
Q  196 tgttgtgataaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 294  Q
    ||||||||| |||||||||||||||||| ||| | || || |||| ||||||||| || | || | |||||||||||||||||  || |||||||||||    
T  24726 tgttgtgatgaatatgatttactttgatgatt-attgagagaata-ttatatattgtggatgatgatgatatgaagttgtaatgattgtatttgatgat 24822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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