View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0648_low_50 (Length: 262)

Name: NF0648_low_50
Description: NF0648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0648_low_50
NF0648_low_50
[»] chr4 (41 HSPs)
chr4 (16-262)||(44102392-44102637)
chr4 (16-262)||(44928616-44928862)
chr4 (16-262)||(21815325-21815569)
chr4 (144-262)||(16377215-16377333)
chr4 (144-262)||(15091206-15091325)
chr4 (144-262)||(22636743-22636862)
chr4 (144-262)||(44053138-44053257)
chr4 (144-262)||(7799006-7799125)
chr4 (144-262)||(14038958-14039077)
chr4 (16-262)||(13812502-13812749)
chr4 (149-262)||(24029057-24029169)
chr4 (185-262)||(6190783-6190861)
chr4 (28-262)||(52242886-52243120)
chr4 (149-262)||(22633906-22634018)
chr4 (144-262)||(7089186-7089294)
chr4 (16-93)||(15371384-15371461)
chr4 (16-93)||(15373665-15373742)
chr4 (14-93)||(16223712-16223791)
chr4 (149-262)||(15552129-15552241)
chr4 (16-262)||(20156983-20157230)
chr4 (144-262)||(3096952-3097060)
chr4 (16-89)||(22354015-22354088)
chr4 (16-87)||(15367872-15367943)
chr4 (16-87)||(15370199-15370270)
chr4 (16-87)||(15402885-15402956)
chr4 (173-262)||(16596985-16597073)
chr4 (84-262)||(21814996-21815173)
chr4 (84-262)||(21818418-21818595)
chr4 (182-262)||(16239685-16239765)
chr4 (149-236)||(3332201-3332287)
chr4 (220-262)||(12903132-12903174)
chr4 (144-262)||(17047777-17047884)
chr4 (205-262)||(8846746-8846803)
chr4 (16-168)||(15464716-15464869)
chr4 (220-262)||(14053006-14053048)
chr4 (31-113)||(24028937-24029019)
chr4 (16-88)||(3332066-3332138)
chr4 (144-210)||(7894010-7894077)
chr4 (32-113)||(22634056-22634137)
chr4 (144-200)||(14053058-14053114)
chr4 (224-260)||(14685534-14685570)
[»] chr8 (31 HSPs)
chr8 (16-262)||(41598366-41598612)
chr8 (144-262)||(18878930-18879049)
chr8 (144-261)||(20536517-20536635)
chr8 (77-262)||(22626978-22627163)
chr8 (144-262)||(23406690-23406809)
chr8 (144-262)||(18818103-18818221)
chr8 (144-262)||(22875375-22875493)
chr8 (144-262)||(6759566-6759685)
chr8 (17-130)||(19801252-19801365)
chr8 (177-262)||(7373091-7373177)
chr8 (149-262)||(21249697-21249809)
chr8 (149-262)||(21255535-21255647)
chr8 (16-128)||(13507911-13508023)
chr8 (16-128)||(13597443-13597555)
chr8 (144-262)||(21923621-21923740)
chr8 (149-262)||(5865970-5866082)
chr8 (77-262)||(28648737-28648922)
chr8 (16-93)||(17611974-17612051)
chr8 (144-262)||(16092034-16092152)
chr8 (149-262)||(17141229-17141341)
chr8 (142-262)||(21918703-21918814)
chr8 (148-262)||(23648867-23648981)
chr8 (144-262)||(25362844-25362952)
chr8 (150-262)||(21674021-21674133)
chr8 (149-262)||(21491308-21491420)
chr8 (220-262)||(45130724-45130766)
chr8 (144-261)||(16199352-16199458)
chr8 (220-262)||(31971630-31971672)
chr8 (28-130)||(40492677-40492779)
chr8 (149-262)||(26355391-26355504)
chr8 (149-261)||(39834147-39834259)
[»] chr5 (33 HSPs)
chr5 (16-262)||(36154521-36154767)
chr5 (16-262)||(11580938-11581184)
chr5 (77-262)||(13095737-13095922)
chr5 (144-262)||(23390189-23390308)
chr5 (144-262)||(24529530-24529649)
chr5 (144-262)||(21985840-21985958)
chr5 (144-262)||(1096777-1096895)
chr5 (77-262)||(13025553-13025738)
chr5 (77-262)||(24493811-24493996)
chr5 (149-262)||(22119886-22119998)
chr5 (77-260)||(25421775-25421958)
chr5 (144-262)||(9078262-9078380)
chr5 (16-262)||(24767030-24767277)
chr5 (75-260)||(25431635-25431820)
chr5 (31-259)||(22144247-22144475)
chr5 (144-262)||(8286546-8286654)
chr5 (153-262)||(21565863-21565972)
chr5 (149-262)||(19660530-19660643)
chr5 (173-260)||(21871266-21871353)
chr5 (173-260)||(21875546-21875633)
chr5 (149-262)||(22959226-22959339)
chr5 (220-262)||(21292674-21292716)
chr5 (16-89)||(31061247-31061320)
chr5 (144-262)||(22107077-22107185)
chr5 (17-89)||(21871438-21871510)
chr5 (17-89)||(21875718-21875790)
chr5 (32-113)||(22120036-22120119)
chr5 (144-194)||(21292732-21292782)
chr5 (144-194)||(22075328-22075378)
chr5 (220-262)||(22075394-22075436)
chr5 (149-258)||(5888872-5888981)
chr5 (205-262)||(19669271-19669328)
chr5 (16-53)||(40726036-40726073)
[»] scaffold0142 (2 HSPs)
scaffold0142 (16-262)||(16962-17208)
scaffold0142 (149-255)||(7471-7576)
[»] chr3 (46 HSPs)
chr3 (16-262)||(17247979-17248225)
chr3 (16-262)||(53070392-53070637)
chr3 (77-262)||(40213414-40213599)
chr3 (144-262)||(26687196-26687315)
chr3 (144-262)||(13442583-13442702)
chr3 (77-262)||(14572831-14573016)
chr3 (142-262)||(17488164-17488285)
chr3 (70-262)||(25476078-25476270)
chr3 (142-262)||(17499646-17499767)
chr3 (144-262)||(18438844-18438962)
chr3 (16-130)||(23274870-23274984)
chr3 (16-262)||(14665786-14666033)
chr3 (16-262)||(14735299-14735546)
chr3 (149-262)||(12340068-12340180)
chr3 (142-262)||(11424456-11424576)
chr3 (16-103)||(17672804-17672891)
chr3 (77-258)||(14576530-14576711)
chr3 (149-262)||(14669076-14669188)
chr3 (148-262)||(12934003-12934117)
chr3 (144-262)||(14973164-14973282)
chr3 (16-93)||(24340584-24340661)
chr3 (148-262)||(49667776-49667890)
chr3 (16-130)||(2051024-2051138)
chr3 (149-262)||(12852057-12852169)
chr3 (28-130)||(52523552-52523654)
chr3 (144-262)||(20698140-20698248)
chr3 (189-262)||(4588508-4588581)
chr3 (149-262)||(16097645-16097758)
chr3 (144-262)||(23083054-23083173)
chr3 (148-262)||(32307983-32308096)
chr3 (144-232)||(43841241-43841330)
chr3 (149-258)||(13210024-13210133)
chr3 (204-262)||(14179693-14179750)
chr3 (220-262)||(16809775-16809817)
chr3 (16-73)||(12119651-12119708)
chr3 (16-113)||(14668941-14669038)
chr3 (152-262)||(49389337-49389446)
chr3 (148-261)||(1644377-1644489)
chr3 (204-262)||(9513280-9513338)
chr3 (204-262)||(9521255-9521313)
chr3 (220-262)||(30030214-30030256)
chr3 (77-262)||(42386654-42386839)
chr3 (228-262)||(43842572-43842606)
chr3 (16-53)||(22147427-22147464)
chr3 (16-53)||(37642166-37642203)
chr3 (226-262)||(324627-324663)
[»] chr1 (24 HSPs)
chr1 (16-260)||(433189-433433)
chr1 (144-262)||(34510090-34510208)
chr1 (70-262)||(22532505-22532697)
chr1 (78-262)||(50209906-50210090)
chr1 (144-261)||(22354266-22354384)
chr1 (28-188)||(16758845-16759005)
chr1 (150-262)||(33681325-33681437)
chr1 (149-262)||(20918917-20919029)
chr1 (16-130)||(21342275-21342389)
chr1 (16-130)||(21347140-21347254)
chr1 (148-262)||(20135501-20135615)
chr1 (16-93)||(21473126-21473203)
chr1 (16-93)||(21477699-21477776)
chr1 (220-262)||(22355878-22355920)
chr1 (220-262)||(22357564-22357606)
chr1 (148-262)||(21754350-21754463)
chr1 (220-262)||(20846923-20846965)
chr1 (220-262)||(21027055-21027097)
chr1 (220-262)||(27250433-27250475)
chr1 (142-262)||(38801095-38801205)
chr1 (149-262)||(20248592-20248705)
chr1 (205-262)||(52927674-52927731)
chr1 (173-262)||(20091167-20091257)
chr1 (205-262)||(22238000-22238057)
[»] chr7 (31 HSPs)
chr7 (16-262)||(17061653-17061899)
chr7 (16-262)||(44116687-44116932)
chr7 (16-262)||(12756410-12756655)
chr7 (144-262)||(9509498-9509617)
chr7 (144-262)||(3564057-3564175)
chr7 (77-262)||(38227723-38227908)
chr7 (142-262)||(15143730-15143850)
chr7 (144-262)||(12699141-12699260)
chr7 (16-262)||(39267339-39267586)
chr7 (149-255)||(18302494-18302599)
chr7 (16-262)||(9751243-9751490)
chr7 (39-262)||(12255484-12255707)
chr7 (28-190)||(2279883-2280045)
chr7 (149-262)||(28504994-28505106)
chr7 (16-93)||(10063684-10063761)
chr7 (149-262)||(2831999-2832110)
chr7 (16-89)||(38898287-38898360)
chr7 (16-93)||(19486605-19486682)
chr7 (148-262)||(810822-810936)
chr7 (220-262)||(16385951-16385993)
chr7 (149-262)||(34201099-34201211)
chr7 (205-262)||(44014545-44014602)
chr7 (220-262)||(40443763-40443805)
chr7 (144-258)||(27847541-27847645)
chr7 (153-262)||(15754580-15754689)
chr7 (31-116)||(2832145-2832230)
chr7 (149-213)||(11995771-11995835)
chr7 (28-132)||(16091951-16092055)
chr7 (144-200)||(40443698-40443754)
chr7 (23-58)||(9177562-9177597)
chr7 (220-255)||(26212371-26212406)
[»] scaffold0413 (1 HSPs)
scaffold0413 (16-262)||(15308-15554)
[»] chr6 (34 HSPs)
chr6 (16-262)||(18456897-18457142)
chr6 (142-262)||(22779920-22780041)
chr6 (148-262)||(29808576-29808691)
chr6 (144-262)||(29060850-29060968)
chr6 (142-258)||(20594081-20594197)
chr6 (144-262)||(19303234-19303352)
chr6 (148-262)||(28496166-28496280)
chr6 (78-260)||(18409522-18409704)
chr6 (144-262)||(17287489-17287608)
chr6 (149-262)||(21939699-21939811)
chr6 (16-130)||(25644504-25644618)
chr6 (16-93)||(8227372-8227449)
chr6 (144-262)||(20360664-20360772)
chr6 (144-260)||(25629050-25629166)
chr6 (151-262)||(19652512-19652623)
chr6 (144-262)||(18821523-18821631)
chr6 (149-262)||(15894123-15894237)
chr6 (149-262)||(4185516-4185629)
chr6 (149-262)||(4667906-4668019)
chr6 (220-262)||(20637987-20638029)
chr6 (149-262)||(25611416-25611530)
chr6 (150-258)||(27332981-27333089)
chr6 (150-258)||(27393721-27393829)
chr6 (153-262)||(1561622-1561731)
chr6 (149-262)||(4189271-4189384)
chr6 (149-262)||(4674753-4674866)
chr6 (216-262)||(31155091-31155137)
chr6 (153-262)||(25603078-25603188)
chr6 (16-112)||(27325278-27325374)
chr6 (220-262)||(16920337-16920379)
chr6 (144-194)||(16920395-16920445)
chr6 (144-211)||(20638027-20638095)
chr6 (144-200)||(22831811-22831867)
chr6 (224-260)||(31164553-31164589)
[»] scaffold0839 (1 HSPs)
scaffold0839 (85-262)||(1770-1947)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-262)||(20119-20364)
[»] scaffold0503 (1 HSPs)
scaffold0503 (16-262)||(12111-12356)
[»] scaffold0011 (2 HSPs)
scaffold0011 (144-262)||(52221-52340)
scaffold0011 (144-262)||(167683-167791)
[»] chr2 (21 HSPs)
chr2 (77-262)||(23660265-23660450)
chr2 (144-262)||(27753884-27754003)
chr2 (142-262)||(22737873-22737994)
chr2 (144-262)||(32451622-32451741)
chr2 (144-262)||(298508-298626)
chr2 (148-262)||(22730926-22731041)
chr2 (148-262)||(23076755-23076868)
chr2 (16-129)||(19672010-19672122)
chr2 (144-262)||(22337425-22337543)
chr2 (149-262)||(23071656-23071768)
chr2 (28-190)||(23708383-23708545)
chr2 (220-262)||(20309480-20309522)
chr2 (220-262)||(23654103-23654145)
chr2 (150-262)||(22133910-22134020)
chr2 (152-262)||(28406297-28406407)
chr2 (220-262)||(23286236-23286278)
chr2 (220-262)||(37820-37862)
chr2 (28-58)||(23004944-23004974)
chr2 (142-192)||(23286168-23286218)
chr2 (144-200)||(20309414-20309470)
chr2 (97-168)||(20519978-20520050)
[»] scaffold0122 (2 HSPs)
scaffold0122 (144-262)||(25758-25876)
scaffold0122 (144-262)||(33187-33306)
[»] scaffold0003 (1 HSPs)
scaffold0003 (144-262)||(339644-339762)
[»] scaffold0305 (1 HSPs)
scaffold0305 (142-262)||(20710-20831)
[»] scaffold0056 (3 HSPs)
scaffold0056 (16-168)||(79116-79268)
scaffold0056 (77-262)||(16908-17093)
scaffold0056 (221-262)||(79055-79096)
[»] scaffold0292 (2 HSPs)
scaffold0292 (144-262)||(3779-3898)
scaffold0292 (144-262)||(652-770)
[»] scaffold0228 (3 HSPs)
scaffold0228 (144-262)||(4817-4936)
scaffold0228 (144-262)||(12399-12518)
scaffold0228 (144-262)||(22351-22470)
[»] scaffold0016 (3 HSPs)
scaffold0016 (144-262)||(2160-2279)
scaffold0016 (149-262)||(207212-207324)
scaffold0016 (16-113)||(207362-207459)
[»] scaffold0175 (2 HSPs)
scaffold0175 (144-258)||(13401-13516)
scaffold0175 (150-262)||(34437-34548)
[»] scaffold0042 (1 HSPs)
scaffold0042 (142-262)||(23995-24115)
[»] scaffold0021 (2 HSPs)
scaffold0021 (144-262)||(124894-125010)
scaffold0021 (205-262)||(62932-62989)
[»] scaffold0026 (4 HSPs)
scaffold0026 (142-262)||(40164-40284)
scaffold0026 (184-262)||(26575-26653)
scaffold0026 (206-260)||(39626-39680)
scaffold0026 (149-262)||(59196-59308)
[»] scaffold0217 (1 HSPs)
scaffold0217 (144-262)||(16292-16411)
[»] scaffold0121 (1 HSPs)
scaffold0121 (144-262)||(8225-8344)
[»] scaffold0145 (1 HSPs)
scaffold0145 (144-262)||(39070-39187)
[»] scaffold0080 (1 HSPs)
scaffold0080 (77-260)||(40155-40337)
[»] scaffold0034 (1 HSPs)
scaffold0034 (144-262)||(51577-51696)
[»] scaffold0540 (1 HSPs)
scaffold0540 (144-262)||(706-824)
[»] scaffold0352 (1 HSPs)
scaffold0352 (177-262)||(17701-17787)
[»] scaffold0012 (1 HSPs)
scaffold0012 (16-158)||(225589-225731)
[»] scaffold0639 (1 HSPs)
scaffold0639 (144-262)||(8784-8903)
[»] scaffold0037 (2 HSPs)
scaffold0037 (149-262)||(80025-80137)
scaffold0037 (16-113)||(80175-80272)
[»] scaffold0266 (1 HSPs)
scaffold0266 (201-262)||(18651-18712)
[»] scaffold0192 (1 HSPs)
scaffold0192 (149-257)||(10226-10333)
[»] scaffold0627 (1 HSPs)
scaffold0627 (144-262)||(214-332)
[»] scaffold0221 (2 HSPs)
scaffold0221 (152-262)||(12502-12611)
scaffold0221 (16-89)||(12675-12748)
[»] scaffold0166 (1 HSPs)
scaffold0166 (16-262)||(9527-9774)
[»] scaffold0347 (1 HSPs)
scaffold0347 (149-262)||(344-456)
[»] scaffold0231 (1 HSPs)
scaffold0231 (77-262)||(23125-23310)
[»] scaffold0075 (1 HSPs)
scaffold0075 (149-262)||(7987-8099)
[»] scaffold0120 (3 HSPs)
scaffold0120 (67-262)||(16320-16515)
scaffold0120 (205-262)||(32652-32709)
scaffold0120 (205-262)||(46296-46353)
[»] scaffold0647 (1 HSPs)
scaffold0647 (144-262)||(5814-5933)
[»] scaffold0100 (1 HSPs)
scaffold0100 (148-262)||(20426-20540)
[»] scaffold0028 (1 HSPs)
scaffold0028 (148-262)||(132967-133081)
[»] scaffold1984 (1 HSPs)
scaffold1984 (144-262)||(440-558)
[»] scaffold0218 (1 HSPs)
scaffold0218 (153-262)||(28973-29081)
[»] scaffold0161 (1 HSPs)
scaffold0161 (149-262)||(2138-2250)
[»] scaffold0124 (1 HSPs)
scaffold0124 (149-262)||(24344-24456)
[»] scaffold0150 (1 HSPs)
scaffold0150 (148-262)||(32397-32511)
[»] scaffold0247 (3 HSPs)
scaffold0247 (16-93)||(17888-17965)
scaffold0247 (16-89)||(2039-2112)
scaffold0247 (226-262)||(6521-6557)
[»] scaffold0876 (1 HSPs)
scaffold0876 (214-262)||(2778-2826)
[»] scaffold1137 (1 HSPs)
scaffold1137 (148-262)||(1994-2108)
[»] scaffold0165 (2 HSPs)
scaffold0165 (144-260)||(3790-3896)
scaffold0165 (144-260)||(7854-7960)
[»] scaffold0556 (1 HSPs)
scaffold0556 (149-262)||(7126-7239)
[»] scaffold0261 (1 HSPs)
scaffold0261 (149-262)||(15974-16086)
[»] scaffold0141 (1 HSPs)
scaffold0141 (144-222)||(39786-39864)
[»] scaffold0049 (1 HSPs)
scaffold0049 (144-222)||(74948-75026)
[»] scaffold0484 (1 HSPs)
scaffold0484 (144-262)||(1223-1331)
[»] scaffold0628 (1 HSPs)
scaffold0628 (148-262)||(2496-2609)
[»] scaffold0211 (1 HSPs)
scaffold0211 (148-262)||(28502-28616)
[»] scaffold0193 (1 HSPs)
scaffold0193 (142-262)||(13518-13628)
[»] scaffold0007 (2 HSPs)
scaffold0007 (16-75)||(164515-164574)
scaffold0007 (16-75)||(161014-161073)
[»] scaffold0718 (1 HSPs)
scaffold0718 (220-262)||(4835-4877)
[»] scaffold0598 (1 HSPs)
scaffold0598 (220-262)||(756-798)
[»] scaffold0475 (1 HSPs)
scaffold0475 (149-262)||(9391-9504)
[»] scaffold0456 (2 HSPs)
scaffold0456 (220-262)||(10130-10172)
scaffold0456 (144-200)||(10182-10238)
[»] scaffold0403 (1 HSPs)
scaffold0403 (220-262)||(5223-5265)
[»] scaffold0235 (1 HSPs)
scaffold0235 (220-262)||(11217-11259)
[»] scaffold0114 (1 HSPs)
scaffold0114 (220-262)||(15169-15211)
[»] scaffold0102 (1 HSPs)
scaffold0102 (144-262)||(19576-19694)
[»] scaffold0023 (1 HSPs)
scaffold0023 (148-262)||(101709-101822)
[»] scaffold1842 (1 HSPs)
scaffold1842 (144-262)||(753-861)
[»] scaffold0358 (2 HSPs)
scaffold0358 (144-262)||(245-353)
scaffold0358 (144-262)||(5021-5129)
[»] scaffold0001 (2 HSPs)
scaffold0001 (16-89)||(85490-85563)
scaffold0001 (205-262)||(161056-161113)
[»] scaffold0357 (2 HSPs)
scaffold0357 (28-130)||(13324-13426)
scaffold0357 (28-130)||(15924-16026)
[»] scaffold0064 (1 HSPs)
scaffold0064 (220-262)||(47361-47403)
[»] scaffold0032 (1 HSPs)
scaffold0032 (220-262)||(51954-51996)
[»] scaffold0010 (1 HSPs)
scaffold0010 (28-189)||(60479-60641)
[»] scaffold0761 (1 HSPs)
scaffold0761 (16-72)||(4475-4531)
[»] scaffold0130 (2 HSPs)
scaffold0130 (144-227)||(28140-28223)
scaffold0130 (222-262)||(28924-28964)
[»] scaffold0395 (1 HSPs)
scaffold0395 (142-262)||(655-776)
[»] scaffold0389 (1 HSPs)
scaffold0389 (223-262)||(13301-13340)
[»] scaffold0351 (1 HSPs)
scaffold0351 (223-262)||(16657-16696)
[»] scaffold0490 (2 HSPs)
scaffold0490 (220-262)||(2327-2369)
scaffold0490 (142-193)||(2259-2310)
[»] scaffold0427 (1 HSPs)
scaffold0427 (220-262)||(13870-13912)
[»] scaffold0309 (2 HSPs)
scaffold0309 (220-262)||(6985-7027)
scaffold0309 (144-193)||(6919-6968)
[»] scaffold0125 (1 HSPs)
scaffold0125 (149-262)||(45482-45596)
[»] scaffold0113 (2 HSPs)
scaffold0113 (220-262)||(32439-32481)
scaffold0113 (144-200)||(32373-32429)
[»] scaffold0088 (1 HSPs)
scaffold0088 (220-262)||(21276-21318)
[»] scaffold0084 (1 HSPs)
scaffold0084 (142-237)||(10471-10568)
[»] scaffold0151 (1 HSPs)
scaffold0151 (230-262)||(10540-10572)
[»] scaffold0070 (1 HSPs)
scaffold0070 (152-260)||(4841-4949)
[»] scaffold0461 (1 HSPs)
scaffold0461 (28-61)||(11659-11692)
[»] scaffold0555 (1 HSPs)
scaffold0555 (173-262)||(917-1007)
[»] scaffold0123 (1 HSPs)
scaffold0123 (28-116)||(25300-25388)


Alignment Details
Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 44102392 - 44102637
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |    
T  44102392 atcatcataaatcagcttcacagatcatcattaatattatatataatattcataactatcccaaggttcaactctcaacgactcgtgctacaaagatcgc 44102491  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| | |||||||| |||||||||||||||| |||||||| |||||| |    
T  44102492 aaaatcctaaacaagtattctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaa 44102591  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||||    
T  44102592 atctatccaggttcaatctcatcctacattc-ttcataatcattatt 44102637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 44928862 - 44928616
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  44928862 atcatcataaatcagcttcacagatcatcattaatattatatataatattcataactaccacaaggttcaactctcaacgactcgtgcgacaaagatcgc 44928763  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||||||||||||| | ||| ||| | |||||||||||||||||||| ||||| | |||||||| ||||| |||||||||||||||||||||||||| |    
T  44928762 aaaatcctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaagtttcattctaaa 44928663  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  44928662 atctttccaggttcaatctcattctacattctttcctaatcattatt 44928616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 21815569 - 21815325
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    |||| |||||| ||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||| ||||||||| |  |||||| |    
T  21815569 atcaccataaatcagcttcacatatcatcattaatattatatacagtattcataacta-cccaaggttcaactctcaacgactcgtgcgatgaagatcgc 21815471  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    |||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||  | |||||||| |||||||||||| |||| |||  ||||||||  |    
T  21815470 aaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattct-ta 21815372  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||   |||||||||| | |||| ||| ||| ||||||||||||||||    
T  21815371 attaatccaggttcattatcattctaaattatttcctaatcattatt 21815325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 16377333 - 16377215
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    ||||||||| |||||||||| ||||| | ||| |||| |||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||    
T  16377333 ggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagattcccaaaagttcattctacgatcattccaggttcaatctcatcctaca 16377234  T
Q  244 ttctttcctaatcattatt 262  Q
    || ||||||||||||||||    
T  16377233 ttatttcctaatcattatt 16377215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 15091206 - 15091325
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||||| ||||    
T  15091206 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattctac 15091305  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||| ||||    
T  15091306 attctttcctaatcaatatt 15091325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 22636743 - 22636862
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||||| |||||||||| ||||| | ||| |||| || ||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  22636743 ggtcactcgtgaggcgagagcctctgctcgccgtggcgaggtcaagtcagaatcccacaagtttcattctacaatttttccaggttcaatctcatcctac 22636842  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  22636843 attctttcctaatcattatt 22636862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 44053138 - 44053257
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||| ||| ||||||| ||||||||||||||||||||    
T  44053138 ggtcactcgcgaggcgagagtctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcatcctataatctttacaggttcaatctcatcctac 44053237  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||| ||||||||||    
T  44053238 attctttcccaatcattatt 44053257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 7799006 - 7799125
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| | | | |||||||||||||||| |||||||||||||||||||||||||    
T  7799006 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatactacaagtttcattctacaaactttccaggttcaatctcatcctac 7799105  T
Q  243 attctttcctaatcattatt 262  Q
    ||| | ||||||||||||||    
T  7799106 attatgtcctaatcattatt 7799125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 14038958 - 14039077
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||| ||||||||| ||||| ||||||||||| |||||||| |||||||||||||| ||||    
T  14038958 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatctttctaggttcaatctcattctac 14039057  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||| ||||||||||    
T  14039058 attctttccaaatcattatt 14039077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 13812749 - 13812502
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||||    
T  13812749 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcac 13812650  T
Q  116 aaa-atcctaaacaa-gtaatctttaa-ataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattc 211  Q
    |   | ||||||||| | | ||| ||| |   ||  ||||||||||||||| ||||| | |||||||| |||| || |||||||| ||||||||||||||    
T  13812649 atttaacctaaacaaagcattctgtaatactagtg-ctcgcgaggcgagagcctctgctcgccatggcgagtttag-tcagattctccaaagtttcattc 13812552  T
Q  212 tacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    || | ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  13812551 ta-agtctttccaggttcaatctcatcctacattatttcctaatcaatatt 13812502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 24029057 - 24029169
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| |||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  24029057 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 24029154  T
Q  248 ttcctaatcattatt 262  Q
    ||| |||||| ||||    
T  24029155 ttcataatcaatatt 24029169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 6190783 - 6190861
Alignment:
Q  185 tcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6190783 tcaggtcaaaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctctcctaatcattatt 6190861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 262
Target Start/End: Complemental strand, 52243120 - 52242886
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    |||||||||| ||||||||||||||  |||| ||| ||||| |||| | ||| ||||||||||  | ||||||||| ||||||||| |||||||||||||    
T  52243120 cagcttcacagatcatcattaatatcttatacaatcttcattactaccccaaagttcaactctttacgactcgtgcgacaaagatcgcaaaatcctaaac 52243021  T
Q  128 aagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggt 227  Q
    ||| | ||| ||| | ||  |||||||||||||||| ||||  | || ||||| |||||||||   | ||||||   | ||||||  ||   ||||||||    
T  52243020 aagcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaacaatgcattcttaaactattccaggt 52242921  T
Q  228 tcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||| ||| | |||||||| |||||||||    
T  52242920 tcaatctcattctagaatctttcctgatcattatt 52242886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 22634018 - 22633906
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||  || ||||  |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  22634018 ctcgcgaggcgagagcctctgctcgccatggcgagttcaa-tctgattatccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 22633921  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  22633920 ttcctaatcaatatt 22633906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 7089186 - 7089294
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||           ||||||||||||||||||||    
T  7089186 ggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccataagtttcattc-----------caggttcaatctcatcctac 7089274  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  7089275 attctttcctaatcattatt 7089294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 15371384 - 15371461
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  15371384 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 15371461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 15373665 - 15373742
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  15373665 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 15373742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 16223712 - 16223791
Alignment:
Q  14 acatcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||||| |||||||||| ||||||||||||||  || |||||||||||||||| | |||||||||||||||||    
T  16223712 acatcatcataaatcagcttcacagatcatcattaatatcgtaaataatattcataactaccccaaggttcaactctcaa 16223791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 15552129 - 15552241
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||| ||| ||||| | ||| |||| ||||| |||||||||| ||||| ||| |||||| | ||||||||||| |||||||||||||||||||    
T  15552129 ctcgcgaggcgcgagcctctgctcgccgtggcgagttc-ggtcagattctccaaattttgattcta-agtctttccaggtccaatctcatcctacattct 15552226  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  15552227 ttcctaatcattatt 15552241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 20157230 - 20156983
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| ||||||||| |    
T  20157230 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcgc 20157131  T
Q  116 a-aaatcctaaacaa-gtaatctttaa-ataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattc 211  Q
    |   | ||||||||| | | ||| ||| |   ||  ||||||||||||||| |||||   |||||||| |||||| |||| ||||  |||||||||||||    
T  20157130 atttaacctaaacaaggcactctgtaatactagt-gctcgcgaggcgagagcctctgcacgccatggcgagttca-gtcatattcttcaaagtttcattc 20157033  T
Q  212 tacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    || |  |||||||||||||||||||||||||||||||||||||||| ||||    
T  20157032 ta-agcctttccaggttcaatctcatcctacattctttcctaatcaatatt 20156983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 3096952 - 3097060
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||           ||||||||||||||||||||    
T  3096952 ggtcactcgcgaggcgagagcctctgctcgccttggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctac 3097040  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  3097041 attctttcctaatcattatt 3097060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 22354015 - 22354088
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 89  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  22354015 atcatcataaatcagtttcacagatcatcattaatattatatataatattcgtaactaccccaaggttcaactc 22354088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 15367872 - 15367943
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaac 87  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||    
T  15367872 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaac 15367943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 15370199 - 15370270
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaac 87  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||    
T  15370199 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaac 15370270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 15402885 - 15402956
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaac 87  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||    
T  15402885 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaac 15402956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 16596985 - 16597073
Alignment:
Q  173 gccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||| ||||| |||||||||| | ||| |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16596985 gccatggcgagttc-ggtcagattctctaaattttcattcta-agtctttccaggttcaatctcattctacattctttcctaatcattatt 16597073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 262
Target Start/End: Complemental strand, 21815173 - 21814996
Alignment:
Q  84 caactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctag 183  Q
    |||||||||| ||||||||| |  |||||| ||||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||  | |||||||| ||    
T  21815173 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgag 21815074  T
Q  184 ttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||| |||| |||  ||||||||  |||   |||||||||| | |||| ||| ||||||||||||||||||||    
T  21815073 ttcaagtcagcttccaaaaagttcattct-taattaatccaggttcattatcattctaaattctttcctaatcattatt 21814996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 262
Target Start/End: Complemental strand, 21818595 - 21818418
Alignment:
Q  84 caactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctag 183  Q
    |||||||||| ||||||||| |  |||||| ||||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||  | |||||||| ||    
T  21818595 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgag 21818496  T
Q  184 ttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||| |||| |||  ||||||||  |||   |||||||||| | |||| ||| ||||||||||||||||||||    
T  21818495 ttcaagtcagcttccaaaaagttcattct-taattaatccaggttcattatcattctaaattctttcctaatcattatt 21818418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 16239765 - 16239685
Alignment:
Q  182 agttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca-ttctttcctaatcattatt 262  Q
    ||||||||| ||| |||  ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  16239765 agttcaggttagaatccacaagtttcattcta-aatctttccaggttcaatctcattctacatttctttcctaatcattatt 16239685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 3332201 - 3332287
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctca 236  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  3332201 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagtttcattcta-agtctttccaggttcaatctca 3332287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 12903132 - 12903174
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12903132 ttccaggttcaatctcatcctacattctttcctaatcattatt 12903174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 17047884 - 17047777
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | |||||||| ||||||||||||| ||||| ||||||||||| |            |||||||||||||||||    
T  17047884 ggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattcca------------gttcaatctcatcctac 17047797  T
Q  243 attctttcctaatcattatt 262  Q
    ||| ||||||||||||||||    
T  17047796 attttttcctaatcattatt 17047777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 8846746 - 8846803
Alignment:
Q  205 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||    
T  8846746 ttcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattatt 8846803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 15464869 - 15464716
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | |||||||||| |||||||||||||| ||||| |||  |||| ||||   |||||||||||||  ||  ||| |||| ||||||||  |    
T  15464869 atcatcatatatcagcttcacaaatcatcattaatatcatatacaattctcattactactccaaggttcaactcataacaacttgtgcgacaaagattgc 15464770  T
Q  116 aaaatcctaaacaagt-aatctttaaataggtcactcgcgaggcgagagactct 168  Q
    |||||||||||||||| | ||| ||| | ||  |||||||||||||||| ||||    
T  15464769 aaaatcctaaacaagtcattctgtaactgggcaactcgcgaggcgagagcctct 15464716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 14053048 - 14053006
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  14053048 ttccaagttcaatctcatcctacattctttcctaatcattatt 14053006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 24028937 - 24029019
Alignment:
Q  31 cttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 113  Q
    ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  24028937 cttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 24029019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 3332066 - 3332138
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaact 88  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| ||||||||||||    
T  3332066 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaact 3332138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 7894010 - 7894077
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcatt 210  Q
    ||||||||| |||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||||    
T  7894010 ggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcatt 7894077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 22634137 - 22634056
Alignment:
Q  32 ttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 113  Q
    |||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  | |||||| |||||||||    
T  22634137 ttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaaatcgtgcgacaaagatc 22634056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 14053114 - 14053058
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 200  Q
    |||||||||| ||||||||| ||||| | |||||||  ||||||||||||| |||||    
T  14053114 ggtcactcgcaaggcgagagcctctgctcgccatggtgagttcaggtcagaatccca 14053058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 14685534 - 14685570
Alignment:
Q  224 aggttcaatctcatcctacattctttcctaatcatta 260  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  14685534 aggttcaatcttatcctacattcattcctaatcatta 14685570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 41598366 - 41598612
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||  |||||||| |    
T  41598366 atcatcataaatcagtttcacagatcatcattaatattatatataatattcataactaccccaaggttcaactctcaacgactcgtgcggcaaagatcgc 41598465  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||||||||||||| | ||| ||| |||||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||| |    
T  41598466 aaaatcctaaacaagcattctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaa 41598565  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||    
T  41598566 atctttccaggttcaatctcattctacattctttcataatcattatt 41598612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 18879049 - 18878930
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | | | |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18879049 ggtcactcgcgaggcgagagcctctgctcgtcttggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctac 18878950  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  18878949 attctttcctaatcattatt 18878930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 20536517 - 20536635
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20536517 ggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcctac 20536616  T
Q  243 attctttcctaatcattat 261  Q
    |||||||||||||||||||    
T  20536617 attctttcctaatcattat 20536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 22626978 - 22627163
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactctgtttgcc 175  Q
    |||||||||||||||||  |||||||| |||||| || ||||| ||||| ||||  | ||| |   ||| |||||||||||||||||| ||||| | |||    
T  22626978 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagacactctgtttctagatcactcgcgaggcgagagcctctgctcgcc 22627076  T
Q  176 atggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
     |||| ||||| ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22627077 gtggcaagttcgggtcagatttccaaaggttcattctacaatctttcgaggttcaatctcatcctacattctttcctaatcattatt 22627163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 23406690 - 23406809
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  23406690 ggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggtccaatctcatcctac 23406789  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  23406790 attctttcctaatcattatt 23406809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 18818221 - 18818103
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||||||    
T  18818221 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaaaccaaaagtttcattttacaatctttccaggttcaatctcatcctaca 18818122  T
Q  244 ttctttcctaatcattatt 262  Q
    || ||||||||||||||||    
T  18818121 ttttttcctaatcattatt 18818103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 22875375 - 22875493
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||| | | |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||    
T  22875375 ggtcactcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaacctcgttctaca 22875474  T
Q  244 ttctttcctaatcattatt 262  Q
     ||||||||||||||||||    
T  22875475 atctttcctaatcattatt 22875493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 6759566 - 6759685
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| ||||| ||||||||||| ||| |||||| |||||||||||| ||||    
T  6759566 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattctac 6759665  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  6759666 attctttcctaatcattatt 6759685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 19801365 - 19801252
Alignment:
Q  17 tcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcaca 116  Q
    ||||| |||| |||||||||| |||||||||||| ||||||| |||||||||||||| | ||||||||||||||||| ||||||||| |||||||||  |    
T  19801365 tcatcgtaaatcagcttcacagatcatcattaatgttatatacaatattcataactaccccaaggttcaactctcaatgactcgtgcgacaaagatcgaa 19801266  T
Q  117 aaatcctaaacaag 130  Q
    ||||||||||||||    
T  19801265 aaatcctaaacaag 19801252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 7373091 - 7373177
Alignment:
Q  177 tggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||| |  || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7373091 tggcgagttcaggtcagaatttcacaagtttcattctacaatctttccaggttcaatttcatcctacattctttcctaatcattatt 7373177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 21249697 - 21249809
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||||||||| ||||| |||||||| | | |||||||||||||| ||||||||||||||||    
T  21249697 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctccaaattttcattcca-agtctttccaggttcagtctcatcctacattct 21249794  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  21249795 ttcctaatcattatt 21249809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 21255535 - 21255647
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| | ||| | |||||||| ||||| |||||||||| ||||| |||||||| | | |||||||||||||||||||||||||||||||    
T  21255535 ctcgcgaggcgagagccgctgctcgccatggcgagttc-ggtcagattctccaaattttcattcca-agtctttccaggttcaatctcatcctacattct 21255632  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  21255633 ttcctaatcattatt 21255647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 13508023 - 13507911
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||  ||| |||||| ||||||||||||||||||  ||||||||||||||||| || | ||||||||||||  |||||||| ||||||||| |    
T  13508023 atcatcataattcagtttcacagatcatcattaatattataattaatattcataactatcccacgattcaactctcaacaactcgtgcgacaaagatcgc 13507924  T
Q  116 aaaatcctaaaca 128  Q
    |||| ||||||||    
T  13507923 aaaaacctaaaca 13507911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 13597555 - 13597443
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||  ||| |||||| ||||||||||||||||||  ||||||||||||||||| || | ||||||||||||  |||||||| ||||||||| |    
T  13597555 atcatcataattcagtttcacagatcatcattaatattataattaatattcataactatcccacgattcaactctcaacaactcgtgcgacaaagatcgc 13597456  T
Q  116 aaaatcctaaaca 128  Q
    |||| ||||||||    
T  13597455 aaaaacctaaaca 13597443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 21923740 - 21923621
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcagg-tcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatccta 241  Q
    |||||||||||||||||||| ||||| |  || |||| |||||||| ||||| ||| ||| ||||||||||| ||||||| |||||||||||||||||||    
T  21923740 ggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcagggtcagaatccaaaaagtttcattcta-aatcttttcaggttcaatctcatccta 21923642  T
Q  242 cattctttcctaatcattatt 262  Q
    |||||| ||||||||||||||    
T  21923641 cattctgtcctaatcattatt 21923621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 5866082 - 5865970
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||||||||| | ||| |||||||||| | ||||| ||||||||||||||| |||||||||    
T  5866082 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattcta-agtcttttcaggttcaatctcattctacattct 5865985  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  5865984 ttcctaatcattatt 5865970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 262
Target Start/End: Complemental strand, 28648922 - 28648737
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    |||||||||||||||||  |||||||| |||||| || |||||||||||  | | | ||| |   | |||||  ||| ||||||||| ||||| | |||     
T  28648922 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcatgcgcaaggcgagagcctctgctcgccg 28648823  T
Q  177 tggctagttcaggtcagattcccaaag-tttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||| | | | |||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  28648822 tggcgagttcaggtcaaaattcaaaaggtttcattcta-aatctttccatgttcaatctcatcctacattctttcataatcattatt 28648737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 17612051 - 17611974
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  17612051 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 17611974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 16092152 - 16092034
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||||| |||||||||| ||||| | ||| |||| ||||||||||||| |||| |||||||  || || ||||||| |||||| |||||||| ||||    
T  16092152 ggtcactcgggaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttttttttta-aatcttttcaggtttaatctcattctac 16092054  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  16092053 attctttcctaatcattatt 16092034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 17141229 - 17141341
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||| ||||| | ||| |||||||||| | ||||| ||||||||||||||| |||||||||    
T  17141229 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtctgattctctaaattttcattcta-agtcttttcaggttcaatctcattctacattct 17141326  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  17141327 ttcctaatcattatt 17141341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 21918814 - 21918703
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    |||||||||||||||||||||| ||||| | |||||||| ||||||||||||| ||||| ||||||||          ||||||||||||||||| ||||    
T  21918814 taggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttca----------tttccaggttcaatctcttcct 21918725  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||||||| ||||||||||||    
T  21918724 acattcttttctaatcattatt 21918703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 23648867 - 23648981
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa--gtttcattctacaatctttccaggttcaatctcatcctacatt 245  Q
    |||| ||||||||||| ||||| | |||||||| ||||| ||||||| | |||||  ||||||||||| | ||||| ||||| |||||||||||||||||    
T  23648867 actcacgaggcgagagcctctgatcgccatggcgagttc-ggtcagaattccaaaatgtttcattcta-agtcttttcaggtccaatctcatcctacatt 23648964  T
Q  246 ctttcctaatcattatt 262  Q
    |||||||||||||||||    
T  23648965 ctttcctaatcattatt 23648981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 25362952 - 25362844
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||| ||||||||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||           ||||||||||||||||||||    
T  25362952 ggtcactctcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctac 25362864  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  25362863 attctttcctaatcattatt 25362844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 262
Target Start/End: Original strand, 21674021 - 21674133
Alignment:
Q  150 tcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattcttt 249  Q
    |||||||||||| | ||||  | |||||||| |||||||||   | || ||||  ||||||||| ||||||||||||||||||||||| || || |||||    
T  21674021 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcacaaatattcattctaaaatctttccaggttcaatctcattctccaatcttt 21674120  T
Q  250 cctaatcattatt 262  Q
    |||||||||||||    
T  21674121 cctaatcattatt 21674133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 21491308 - 21491420
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    |||||||||| |||| ||||  | |||||||| ||||  |||||||||| | ||| |||||||||| | |||||| |||||||||||||| |||||||||    
T  21491308 ctcgcgaggcaagagcctctactcgccatggcaagttt-ggtcagattctctaaattttcattcta-agtctttctaggttcaatctcattctacattct 21491405  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  21491406 ttcctaatcattatt 21491420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 45130766 - 45130724
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  45130766 ttccaggttcaatctcatcctacattctttcctaatcattatt 45130724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 261
Target Start/End: Complemental strand, 16199458 - 16199352
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    ||||||||||||||||||||  |||| | ||  |||| ||||||||||||| ||||| ||||| ||||||           |||||||||||||||||||    
T  16199458 ggtcactcgcgaggcgagagcgtctgctcgctgtggcgagttcaggtcagaatcccacagtttaattcta-----------ggttcaatctcatcctaca 16199370  T
Q  244 ttctttcctaatcattat 261  Q
    ||||||||||||||||||    
T  16199369 ttctttcctaatcattat 16199352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 31971630 - 31971672
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  31971630 ttccaggttcaatctcatcctacatcctttcctaatcattatt 31971672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 40492779 - 40492677
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    |||||||||| |||||||||||||||||||| ||  | |||  ||| | ||||| ||||||| |||   ||||||| ||||||||| |||||||||||||    
T  40492779 cagcttcacagatcatcattaatattatatacaacctccattcctaccacaaggatcaactcacaacatctcgtgcgacaaagatcgcaaaatcctaaac 40492680  T
Q  128 aag 130  Q
    |||    
T  40492679 aag 40492677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 26355504 - 26355391
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctt 248  Q
    |||| |||||||||| ||||  | |||||||| |||||||||   |||| ||||  ||||||||| | ||||||||||||||||||||  || || |||     
T  26355504 ctcgtgaggcgagagcctctactcgccatggcaagttcaggtacaattcacaaaaattcattctaaagtctttccaggttcaatctcaatcttcaatctc 26355405  T
Q  249 tcctaatcattatt 262  Q
    ||||||||||||||    
T  26355404 tcctaatcattatt 26355391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 39834147 - 39834259
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctt 248  Q
    ||||||||||||||| ||||  | |||||||| |||||||||   | || ||||| ||||||||  ||   |||||||||||||||||  ||||| ||||    
T  39834147 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaagattcattcttaaactattccaggttcaatctcaatctacaatctt 39834246  T
Q  249 tcctaatcattat 261  Q
    |||||||||||||    
T  39834247 tcctaatcattat 39834259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 4e-87; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 36154767 - 36154521
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  36154767 atcatcataaatcagcttcacatatcatcattaataatatatataatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 36154668  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||| ||||  | |||||||| |||||||||||||||| |||||||| |||||| |    
T  36154667 aaaatcctaaacaagcattctgtaaataggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaagttttattctaaa 36154568  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||    
T  36154567 atctatccaggttcaatctcactctacattctttcctaatcattatt 36154521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 11581184 - 11580938
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| || ||||||| || |||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| | ||||||||| |    
T  11581184 atcatcataaatcaacttcacagattatcattaatattatatataatattcataactaccccaaggttcaactctcaacgactcgtacgacaaagatcgc 11581085  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||||||||||||| | ||| ||||| |||||||||||||||||||| ||||| | |||||||| |||||||||||||||| |||||||| |||||| |    
T  11581084 aaaatcctaaacaagcattctgtaaatgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaa 11580985  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  11580984 atctatccaggttcaatctcattctacattctttcctaatcattatt 11580938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 13095737 - 13095922
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactctgtttgcc 175  Q
    ||||||||||||||||| ||||||||| |||||| || ||||| ||||| ||||| | ||| |   |||||||||||||||||||| | ||||| | ||     
T  13095737 caaggttcaactctcaacgactcgtgcaacaaaggtcgcaaaaacctaa-caagtcactctgtttctaggtcactcgcgaggcgagggcctctgctcgct 13095835  T
Q  176 atggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
     |||| ||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13095836 gtggcgagttcaggtcagaatcccacaagtttcattcta-aatctttccaggtccaatctcatcctacattctttcctaatcattatt 13095922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 23390308 - 23390189
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||||| ||||||| || ||||  | |||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23390308 ggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctac 23390209  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  23390208 attctttcctaatcattatt 23390189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 24529530 - 24529649
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  24529530 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatcctac 24529629  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  24529630 attctttcctaatcattatt 24529649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 21985958 - 21985840
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||| | ||||| ||||| |||| ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  21985958 ggtcactcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattcta-aatctttccaggttcaatctcattctac 21985860  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  21985859 attctttcctaatcattatt 21985840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 1096777 - 1096895
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||||| |||||  |||||||| |||||||||||| |||||||||||||||||    
T  1096777 ggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatctttccagattcaatctcatcctaca 1096876  T
Q  244 ttctttcctaatcattatt 262  Q
    |||||||||||||||||||    
T  1096877 ttctttcctaatcattatt 1096895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 13025553 - 13025738
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactctgtttgcc 175  Q
    |||||||||||||||||  | |||||| |||||| || ||||| ||||| ||||| | ||| |   |||||||||||||||||||| | || || | ||     
T  13025553 caaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaaacctaa-caagtcactctgtttctaggtcactcgcgaggcgagggcctttgctcgct 13025651  T
Q  176 atggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
     |||| ||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13025652 gtggcgagttcaggtcagaatcccacaagtttcattcta-aatctttccaggtccaatctcatcctacattctttcctaatcattatt 13025738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 24493811 - 24493996
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactctgtttgcc 175  Q
    |||||||||||||||||  |||||||| |||||| || ||||| ||||| ||||  | ||| |  || ||| |||| |||||||| || ||||| | |||    
T  24493811 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagacactctgtttatgggttactcacgaggcgaaagcctctgctcgcc 24493909  T
Q  176 atggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
     |||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24493910 gtggcgagttcaggtcagaatccaaaaagtttcattcta-aatctttccaggttcaatctcatcctacattctttcctaatcattatt 24493996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 22119998 - 22119886
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| |||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  22119998 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 22119901  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  22119900 ttcctaatcaatatt 22119886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 25421775 - 25421958
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    |||||||||||||||||  |||||||| |||||| || |||||||||||  | | | ||  |   |||||||||||||||||||||| ||||  | |||     
T  25421775 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactcggtttctaggtcactcgcgaggcgagagcctctactcgccg 25421874  T
Q  177 tggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatta 260  Q
    |||| |||||| |||||||| || |||||||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||    
T  25421875 tggcgagttcaagtcagatttccgaaagtttcattcta-aatctttccaggtccaatctcatcctaagttctttcctaatcatta 25421958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 9078262 - 9078380
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaag-tttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| | | |||| |||||||||| ||||||||||||||||||||||| ||||    
T  9078262 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattcaaaaggtttcattcta-aatctttccaggttcaatctcattctac 9078360  T
Q  243 attctttcctaatcattatt 262  Q
    ||| ||||||||||||||||    
T  9078361 attttttcctaatcattatt 9078380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 24767277 - 24767030
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||||    
T  24767277 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcac 24767178  T
Q  116 aaa-atcctaaacaagtaatctttaaatag--gtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattc 211  Q
    |   | ||||||||||  ||  |  ||||   ||  ||||||||||||||| ||||| | |||||| | ||||||| |||||||| ||||||||||||||    
T  24767177 atttaacctaaacaaggcattctgtaatactagtg-ctcgcgaggcgagagcctctgctcgccatgacgagttcag-tcagattctccaaagtttcattc 24767080  T
Q  212 tacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    || | ||||||||| |||||||||||||||||||||||| |||||| ||||    
T  24767079 ta-agtctttccagattcaatctcatcctacattctttcgtaatcaatatt 24767030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 260
Target Start/End: Original strand, 25431635 - 25431820
Alignment:
Q  75 ctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgc 174  Q
    |||||||||||||||||||  |||||||  |||||| || |||||||||||  | | | ||  |   | |||||||||||||| ||||| ||||  | ||    
T  25431635 ctcaaggttcaactctcaacaactcgtgtaacaaaggtcgcaaaatcctaacaaggcactcgatttctgggtcactcgcgaggtgagagcctctactcgc 25431734  T
Q  175 catggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatta 260  Q
    | |||| |||||| |||||||| ||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  25431735 cgtggcgagttcaagtcagatttccaaaagtttcattcta-aatctttccaggtccaatctcatcctaaattctttcctaatcatta 25431820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 259
Target Start/End: Original strand, 22144247 - 22144475
Alignment:
Q  31 cttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaag 130  Q
    |||||||  ||||||||||||| ||| | ||| ||||| || |   |||||||||||||||||  |||||||| ||||||||| ||||||||||||||||    
T  22144247 cttcacaggtcatcattaatatcataaacaatcttcattacgactccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaag 22144346  T
Q  131 taatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttca 230  Q
     | ||| ||| | ||  |||||||||||||||| ||||  | || ||||| |||||||||   | |||||||  | ||||||  |||  |||||||||||    
T  22144347 cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaattattccaggttca 22144446  T
Q  231 atctcatcctacattctttcctaatcatt 259  Q
    ||||||  ||| | |||||||||||||||    
T  22144447 atctcaatctagaatctttcctaatcatt 22144475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 8286654 - 8286546
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||||||||||||| |||||||| ||||| ||||||||           |||||||||||||||||||||||    
T  8286654 ggtcactcgcgaggcgagagcctctgctcgccatggctagtttaggtcagaatcccacaagtttca-----------ttccaggttcaatctcatcctac 8286566  T
Q  243 attctttcctaatcattatt 262  Q
    |||||||| |||||||||||    
T  8286565 attctttcttaatcattatt 8286546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 21565863 - 21565972
Alignment:
Q  153 cgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcct 252  Q
    ||||||||||| ||||| | |||||||| |||||||||   |||| | ||  ||||||||| ||||||||||||||||||||||| || || ||||||||    
T  21565863 cgaggcgagagcctctgctcgccatggcgagttcaggtacaattcacgaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcct 21565962  T
Q  253 aatcattatt 262  Q
    ||||||||||    
T  21565963 aatcattatt 21565972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 19660643 - 19660530
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagttt-cattctacaatctttccaggttcaatctcatcctacattc 246  Q
    ||||||||||||||| ||||| | |||||||| ||||| ||| |||||| ||||||||| ||||||| | |||||||||||| |||||||| | ||||||    
T  19660643 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggttagattctccaaagttttcattcta-agtctttccaggtttaatctcattccacattc 19660546  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  19660545 tttcctaatcattatt 19660530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 21871353 - 21871266
Alignment:
Q  173 gccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatta 260  Q
    |||||||| ||| ||||||||| || ||||  | ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  21871353 gccatggcgagtacaggtcagaatcacaaaagtccattccataatctttccaggttcaatctcatcctacactctttcctaatcatta 21871266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 21875633 - 21875546
Alignment:
Q  173 gccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatta 260  Q
    |||||||| ||| ||||||||| || ||||  | ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  21875633 gccatggcgagtacaggtcagaatcacaaaagtccattccataatctttccaggttcaatctcatcctacactctttcctaatcatta 21875546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 22959339 - 22959226
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||  | |||||||| ||||||||| ||| ||| ||||  ||||||||| | ||| ||||||||||||||||| || || |||    
T  22959339 ctcgcgaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaagtctctccaggttcaatctcattctccaatct 22959241  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  22959240 ttcctaatcattatt 22959226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 21292716 - 21292674
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  21292716 ttccaggttcaatctcatcctacattctttcctaattattatt 21292674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 31061247 - 31061320
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 89  Q
    |||| |||||| ||||||| || |||||| ||||||||||| ||||||||||||||||||  |||| |||||||    
T  31061247 atcaccataaatcagcttcgcagatcatcgttaatattataaataatattcataactatcctaaggatcaactc 31061320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 22107185 - 22107077
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | |||||||  ||||||||||||| ||||| |||||| |           || ||||||||||||| ||||||    
T  22107185 ggtcactcgcgaggcgagagcctctgctcgccatggtgagttcaggtcagaatcccacaagtttaa-----------tttcaggttcaatctcgtcctac 22107097  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||| ||||    
T  22107096 attctttcctaatcaatatt 22107077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 21871510 - 21871438
Alignment:
Q  17 tcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 89  Q
    |||||||| | || |||||||||||||||||||||| ||| ||| |  |||| |||||| |||||||||||||    
T  21871510 tcatcatatatcaacttcacatatcatcattaatatcatacatattcctcattactatcccaaggttcaactc 21871438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 21875790 - 21875718
Alignment:
Q  17 tcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 89  Q
    |||||||| | || |||||||||||||||||||||| ||| ||| |  |||| |||||| |||||||||||||    
T  21875790 tcatcatatatcaacttcacatatcatcattaatatcatacatattcctcattactatcccaaggttcaactc 21875718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 22120119 - 22120036
Alignment:
Q  32 ttcacatatcatcattaatat--tatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 113  Q
    |||||||||||||||||||||  |||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  22120119 ttcacatatcatcattaatatcatatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 22120036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 21292782 - 21292732
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga 194  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||||||||||    
T  21292782 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 21292732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 22075328 - 22075378
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga 194  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||||||||||    
T  22075328 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 22075378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 22075394 - 22075436
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||| | ||||||||||||||| |||||||||||||    
T  22075394 ttccaggttcattttcatcctacattcttacctaatcattatt 22075436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 258
Target Start/End: Complemental strand, 5888981 - 5888872
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctt 248  Q
    ||||||||||||||| ||||  | |||||||| |||||||||   | || ||||| ||||||||  ||   ||||| |||||||||||  ||||| ||||    
T  5888981 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaagattcattcttaaactattccatgttcaatctcaatctacaatctt 5888882  T
Q  249 tcctaatcat 258  Q
    ||||||||||    
T  5888881 tcctaatcat 5888872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 19669271 - 19669328
Alignment:
Q  205 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||| | |||||||| |||||||||||| |  || ||||||||||||||||||    
T  19669271 ttcattctaaagtctttccacgttcaatctcattccccaatctttcctaatcattatt 19669328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 40726036 - 40726073
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatatt 53  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  40726036 atcatcataaatcagcttcacagatcatcattaatatt 40726073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 16962 - 17208
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||| ||   ||||||||||| |||| ||||||||||||||||||| |    
T  16962 atcatcataaatcagcttcacagatcatcattaataatatatataatactcataaccattataaggttcaactatcaacgactcgtgctacaaagatcgc 17061  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| | |||||||| ||||||||||| |||| |||||||| |||||| |    
T  17062 aaaatcctaaacaagtattctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaagttttattctaaa 17161  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17162 atctatccaggttcaatctcattctacattctttcctaatcattatt 17208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 7576 - 7471
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| |||||||||| ||||||| |||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  7576 ctcgcgaggcgagagcctctgcttgccatggcgagttcag-tcagattatccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 7479  T
Q  248 ttcctaat 255  Q
    ||||||||    
T  7478 ttcctaat 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 17248225 - 17247979
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| || ||||||| |||||| |||||||||||||||||||||||||| | | ||||||| ||||||||| ||||||||| ||||||||| |    
T  17248225 atcatcataaatcatcttcacagatcatctttaatattatatataatattcataacgaccccaaggtttaactctcaacgactcgtgcgacaaagatcgc 17248126  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||| ||||||||| | ||| ||| | |||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||| |    
T  17248125 aaaattctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaa 17248026  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  17248025 atctttccaggttcaatctcattctacattctttcctaatcattatt 17247979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 53070637 - 53070392
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  53070637 atcatcataaatcagcttcacaaatcatcattaatattatatacaatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 53070538  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    |||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||  | |||||||| |||||||||||| |||| |||  ||||||||  |    
T  53070537 aaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattct-ta 53070439  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||   ||||||||||||||||| ||||||||||||||||||||||||    
T  53070438 attaatccaggttcaatctcattctacattctttcctaatcattatt 53070392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 262
Target Start/End: Complemental strand, 40213599 - 40213414
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    ||||||| |||||||||  |||||||| |||||| || |||||||||||  | | | ||| |   | |||||||||||||||||||| ||||| | |||     
T  40213599 caaggttaaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccg 40213500  T
Q  177 tggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40213499 tggcgagttcaggttagattcccaaaagttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 40213414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 26687196 - 26687315
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26687196 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctac 26687295  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  26687296 attctttcctaatcattatt 26687315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 13442583 - 13442702
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13442583 ggtcactcgcgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctac 13442682  T
Q  243 attctttcctaatcattatt 262  Q
    ||| ||||||||||||||||    
T  13442683 attttttcctaatcattatt 13442702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 14572831 - 14573016
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    |||||||||||||||||  |||||||| |||||| || ||||| |||||  | ||| ||| |   |||||||||||||||||||||| ||||  | ||||    
T  14572831 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggtactctgtttctaggtcactcgcgaggcgagagcctctactcgcca 14572930  T
Q  177 tggctagttcaggtcagattcccaaag-tttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||||| |||||| |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  14572931 tggcgagttcaggtcagatttccaaaggtttcattcta-agtctttccaggttcaatctcattctacattctttcctaatcattatt 14573016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 17488164 - 17488285
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    |||||||||||||||||||||| ||||| | ||| |||| | ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||    
T  17488164 taggtcactcgcgaggcgagagcctctgctcgccgtggcgatttcaggtcagaatcctacaagtttcattctacaatctttccaggttcaatctcatcct 17488263  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||    
T  17488264 acattctttcctaatcattatt 17488285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 70 - 262
Target Start/End: Complemental strand, 25476270 - 25476078
Alignment:
Q  70 actatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctg 169  Q
    |||| |||||||||||||||||||  |||||||| |||||| || |||||||||||  | | | ||| |   | |||||||||||||||||||| ||||     
T  25476270 actacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctcta 25476171  T
Q  170 tttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
     | | | |||| ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  25476170 ctcgtcgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcgatctcattctacattctttcataatcattatt 25476078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 17499646 - 17499767
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    ||||||||| | |||||||||| ||||| |  || |||| | ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||    
T  17499646 taggtcactagagaggcgagagcctctgctcaccgtggcgaattcaggtcagaatccaacaagtttcattctacaatctttccaggttcaatctcatcct 17499745  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||    
T  17499746 acattctttcctaatcattatt 17499767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 18438844 - 18438962
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| | ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||  |||    
T  18438844 ggtcactcgcgaggcgagagcctctgctcgccgtggcaacttcaggtcagaattccaaaagtttcattcta-aatctttccaggttcaatctcattttac 18438942  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  18438943 attctttcctaatcattatt 18438962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 23274870 - 23274984
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||  |||||||||| ||||||||||||||||||  ||||||||||||||||| ||||| |||||||||||  |||||||| ||||||||| |    
T  23274870 atcatcataattcagcttcacagatcatcattaatattataattaatattcataactatcccaaggctcaactctcaacaactcgtgcgacaaagatcgc 23274969  T
Q  116 aaaatcctaaacaag 130  Q
    |||| ||||||||||    
T  23274970 aaaaacctaaacaag 23274984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 14665786 - 14666033
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| ||||||||| |    
T  14665786 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcacaaggttcaactcataacaactcgtgcgacaaagatcgc 14665885  T
Q  116 aaa-atcctaaacaagtaatctttaaatag--gtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattc 211  Q
    |   | ||||||||||  ||  |  ||||   ||  ||||||||||||||| ||||| | ||||| || ||||||| |||||||| ||||||||||||||    
T  14665886 atttaacctaaacaaggcattctgtaatactagtg-ctcgcgaggcgagagcctctgctcgccattgcgagttcag-tcagattctccaaagtttcattc 14665983  T
Q  212 tacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    || | ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14665984 ta-agtctttccaggttcaatctcatcctacattctttcctaatcaatatt 14666033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 14735299 - 14735546
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| ||||||||| |    
T  14735299 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcacaaggttcaactcataacaactcgtgcgacaaagatcgc 14735398  T
Q  116 aaa-atcctaaacaagtaatctttaaatag--gtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattc 211  Q
    |   | ||||||||||  ||  |  ||||   ||  ||||||||||||||| ||||| | ||||| || ||||||| |||||||| ||||||||||||||    
T  14735399 atttaacctaaacaaggcattctgtaatactagtg-ctcgcgaggcgagagcctctgctcgccattgcgagttcag-tcagattctccaaagtttcattc 14735496  T
Q  212 tacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    || | ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14735497 ta-agtctttccaggttcaatctcatcctacattctttcctaatcaatatt 14735546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 12340068 - 12340180
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| | |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  12340068 ctcgcgaggcgagagcctctgctcgccatggcgagttcagtt-agattctccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 12340165  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  12340166 ttcctaatcaatatt 12340180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 11424576 - 11424456
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    |||||| ||||||||||||||| ||||  | ||| |||| ||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||| ||    
T  11424576 taggtcgctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattcta-aatctttccaggttcaatctcattct 11424478  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||| ||||||||||||||||    
T  11424477 acattatttcctaatcattatt 11424456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 17672804 - 17672891
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgc 103  Q
    |||||||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  17672804 atcatcataaataagcttcacagatcttcattaatattatatataatattcataactatctcaaggatcaactcacaacgactcgtgc 17672891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 14576711 - 14576530
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    |||||||||||||||||  |||||||| |||||| || |||||||||||  | | | | | |   |||||||||||||||||||||| ||||  | |||     
T  14576711 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcgagagcctctactcgccg 14576612  T
Q  177 tggctagttcaggtcagattcccaaag-tttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcat 258  Q
    ||||  |||||||||||||| |||||| |||||||||| | |||||||||||||||| |||| ||||||||||| ||||||||    
T  14576611 tggcgtgttcaggtcagatttccaaaggtttcattcta-agtctttccaggttcaatgtcattctacattcttttctaatcat 14576530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 14669076 - 14669188
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||| ||||| ||||| | |||||||| ||||||| |||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  14669076 ctcgcgaggtgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 14669173  T
Q  248 ttcctaatcattatt 262  Q
    |||||| ||| ||||    
T  14669174 ttcctattcaatatt 14669188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 12934117 - 12934003
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | |||||||| ||||||||| ||| ||| |||| |||||||||| ||||||||||||||||||||||| ||  | ||    
T  12934117 actcgcgaggcgagagtctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaaatctttccaggttcaatctcattctctaatc 12934019  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  12934018 tttcctaatcattatt 12934003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 14973164 - 14973282
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    ||||||| |||||||||||| ||||| | ||| |||| ||||||||||||| | |||||  ||| ||||| ||||||| | |||| |||||||| |||||    
T  14973164 ggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttctttctaaaatcttttctggtttaatctcattctaca 14973263  T
Q  244 ttctttcctaatcattatt 262  Q
    |||||||||||||||||||    
T  14973264 ttctttcctaatcattatt 14973282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 24340661 - 24340584
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  24340661 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 24340584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 49667890 - 49667776
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | |||||||| ||||||||| ||| ||| |||  |||||||||| ||||||||||||||||||||||| ||  | ||    
T  49667890 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaatatttcattctaaaatctttccaggttcaatctcattctctaatc 49667792  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  49667791 tttcctaatcattatt 49667776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 2051138 - 2051024
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    |||||| || |||||||||||| |||||||||||||| ||| | ||| ||||| || | ||||| |||||||||||||  |||| ||| ||||||||| |    
T  2051138 atcatcttatagcagcttcacaaatcatcattaatatcataaacaatcttcattacgacctcaatgttcaactctcaacaactcatgcgacaaagatcgc 2051039  T
Q  116 aaaatcctaaacaag 130  Q
    |||||||||||||||    
T  2051038 aaaatcctaaacaag 2051024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 12852169 - 12852057
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    |||||||||| |||| ||||| | |||||||| ||||||| |||||||  |||| ||||||||||| | ||||||||| |||||||||||||||||||||    
T  12852169 ctcgcgaggcaagagcctctgctcgccatggcgagttcag-tcagattatcaaaagtttcattcta-agtctttccagattcaatctcatcctacattct 12852072  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  12852071 ttcctaatcaatatt 12852057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 52523654 - 52523552
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    ||||||| || ||||||||||||||  |||| ||| ||||| |||| | ||| ||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  52523654 cagcttctcagatcatcattaatatcttatacaatcttcattactaccccaaagttcaactctcaatgactcgtgcgacaaagatcgcaaaatcctaaac 52523555  T
Q  128 aag 130  Q
    |||    
T  52523554 aag 52523552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 20698248 - 20698140
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||           ||||||||||||||||||||    
T  20698248 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctac 20698160  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  20698159 attctttcctaatcattatt 20698140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 4588581 - 4588508
Alignment:
Q  189 gtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  4588581 gtcagattctccaaagtttcattcta-agtctttacaggttcaatctcatcctacattctttcctaatcaatatt 4588508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 16097645 - 16097758
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctt 248  Q
    ||||||||||||||| ||||  |  ||||||| ||||||||||  |||| ||||  ||||||||| ||||||| ||||||||||||||| || || ||||    
T  16097645 ctcgcgaggcgagagcctctactcaccatggcgagttcaggtccaattcacaaaaattcattctaaaatcttttcaggttcaatctcattctccaatctt 16097744  T
Q  249 tcctaatcattatt 262  Q
    ||||||| ||||||    
T  16097745 tcctaataattatt 16097758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 23083173 - 23083054
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcagg-tcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatccta 241  Q
    ||||| |||||||||||||| ||||  | |||||||| |||| ||| ||||| ||| ||| ||||||||||| ||||||||||||| |||||||||||||    
T  23083173 ggtcattcgcgaggcgagagcctctactcgccatggcgagttaagggtcagaatccaaaaagtttcattcta-aatctttccaggtccaatctcatccta 23083075  T
Q  242 cattctttcctaatcattatt 262  Q
    |||| | ||||||||| ||||    
T  23083074 cattttgtcctaatcactatt 23083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 32307983 - 32308096
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | |||||||| ||||||||| ||| |||||||| || ||||||| | |||| | |||||||||||||| || || ||    
T  32307983 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcccaaaatt-cattctaaagtcttcctaggttcaatctcattctccaatc 32308080  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  32308081 tttcctaatcattatt 32308096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 43841241 - 43841330
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaat 232  Q
    |||||||||||||||||| | || || | ||  |||| ||||||||||||| | ||| ||||||||||||||||||||||||||||||||    
T  43841241 ggtcactcgcgaggcgagggcctttgctcgctgtggcgagttcaggtcagaattccacaagtttcattctacaatctttccaggttcaat 43841330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 258
Target Start/End: Complemental strand, 13210133 - 13210024
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaa-agttt-cattctacaatctttccaggttcaatctcatcctacattc 246  Q
    ||||||||||||||| ||||  | |||||||| ||||| ||||| |||| ||| ||||| ||||||| | ||||||||||||||||||||| |||| |||    
T  13210133 ctcgcgaggcgagagcctctactcgccatggcgagttc-ggtcacattctcaagagttttcattcta-agtctttccaggttcaatctcattctactttc 13210036  T
Q  247 tttcctaatcat 258  Q
    ||||||||||||    
T  13210035 tttcctaatcat 13210024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 14179693 - 14179750
Alignment:
Q  204 tttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||||    
T  14179693 tttcattcta-agtctttccaagttcaatctcattctacattctttcctaatcattatt 14179750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 16809775 - 16809817
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  16809775 ttccaggatcaatctcatcctacattctttcctaatcattatt 16809817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 12119708 - 12119651
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataacta 73  Q
    ||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||||    
T  12119708 atcatcataaatcagcttcacagatcttcattaatattataattaatattcataacta 12119651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 14668941 - 14669038
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 113  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  14668941 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 14669038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 49389446 - 49389337
Alignment:
Q  152 gcgaggcgagagactctgtttgccatggctagttcagg-tcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttc 250  Q
    |||||||||||  ||||| | |||||||| |||||||| |||| ||| ||||  ||||||||| | ||| ||||||||||||||||| || || ||||||    
T  49389446 gcgaggcgagaacctctgctcgccatggcgagttcaggttcag-ttcacaaa-attcattctaaagtctctccaggttcaatctcattctccaatctttc 49389349  T
Q  251 ctaatcattatt 262  Q
    ||||||||||||    
T  49389348 ctaatcattatt 49389337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 1644489 - 1644377
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcagg-tcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | |||||||| |||||||| |||| ||| ||||  ||||||||| | ||||  ||||||||||||||| ||  | ||    
T  1644489 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaaa-attcattctaaagtcttctcaggttcaatctcattctctaatc 1644392  T
Q  247 tttcctaatcattat 261  Q
    |||||||||||||||    
T  1644391 tttcctaatcattat 1644377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 9513280 - 9513338
Alignment:
Q  204 tttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||| ||||||| ||||||||||||||| ||  | ||||||||||||||||||    
T  9513280 tttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattatt 9513338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 9521255 - 9521313
Alignment:
Q  204 tttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||| ||||||| ||||||||||||||| ||  | ||||||||||||||||||    
T  9521255 tttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattatt 9521313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 30030214 - 30030256
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  30030214 ttccaggttcaatctcatcccacattctttcgtaatcattatt 30030256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 42386654 - 42386839
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    ||||||||||||| |||  |||||||| |||||| || ||||||||||||||||   ||| ||| | ||  |||||||||| ||||| ||||  | ||||    
T  42386654 caaggttcaactcacaacaactcgtgcgacaaagttcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggtgagagcctctactcgcca 42386753  T
Q  177 tggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| |||||||||   | |||| |||||||||||||  | | ||| ||||||||||| ||  ||| | |||| |||||||||||||    
T  42386754 tggcgagttcaggtataactcccaaaagtttcattcttaactattt-caggttcaatcacagtctaaagtcttgcctaatcattatt 42386839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 43842572 - 43842606
Alignment:
Q  228 tcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||    
T  43842572 tcaatctcatcctacattctttcctaatcattatt 43842606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 22147464 - 22147427
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatatt 53  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  22147464 atcatcataaatcagcttcacagatcatcattaatatt 22147427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 37642203 - 37642166
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatatt 53  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  37642203 atcatcataaatcagcttcacagatcatcattaatatt 37642166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 324627 - 324663
Alignment:
Q  226 gttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  324627 gttcaatctcattctacaatctttcctaatcattatt 324663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 4e-81; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 16 - 260
Target Start/End: Original strand, 433189 - 433433
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  433189 atcatcataaatcagctttacagatcatcattaatattatttataatattcatagctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 433288  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||||||||||||| | | |  || | |||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||| |    
T  433289 aaaatcctaaacaagcattttgcaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaa 433388  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcatta 260  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  433389 atctttccaggttcaatctcattctacattctttcctaatcatta 433433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 34510090 - 34510208
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    ||||||||| |||||||||| ||||| | ||| |||| ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  34510090 ggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctaca 34510189  T
Q  244 ttctttcctaatcattatt 262  Q
    |||||||||||||||||||    
T  34510190 ttctttcctaatcattatt 34510208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 70 - 262
Target Start/End: Original strand, 22532505 - 22532697
Alignment:
Q  70 actatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactct 168  Q
    |||| |||||||||||||||||||   ||||||| |||||| || ||||||||||| ||||| | ||| |   | |||||||||||||||||||| ||||    
T  22532505 actacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatcctaa-caagtcactctgtttttgggtcactcgcgaggcgagagcctct 22532603  T
Q  169 gtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    | |  || |||| |||||| |||||||| |||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22532604 gctcaccgtggcgagttcaagtcagatttccaaaagttcattctacaatccttccaggttcaatctcatcctacattctttcctaatcattatt 22532697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 78 - 262
Target Start/End: Complemental strand, 50210090 - 50209906
Alignment:
Q  78 aaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccat 177  Q
    ||||||||||||||||  |||||||| |||||| || |||||||||||  | | | ||| |   | |||||||||||||||||||| ||||| | ||| |    
T  50210090 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 50209991  T
Q  178 ggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||| ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50209990 ggcgagttcaggtcagaattccaaaagtttcattcta-aatctttccaggttcaatctcattctacattctttcctaatcattatt 50209906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 261
Target Start/End: Complemental strand, 22354384 - 22354266
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||| |||||||||||| ||||  | ||| |||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  22354384 ggtcacttgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctatccaggttcaatctcatcctac 22354285  T
Q  243 attctttcctaatcattat 261  Q
     || |||||||||||||||    
T  22354284 gttatttcctaatcattat 22354266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 188
Target Start/End: Original strand, 16758845 - 16759005
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    |||||||||| |||||||||||||| ||| | ||| ||||| || | | |||||||||||||||||  |||||||| ||||||||| |||||||||||||    
T  16758845 cagcttcacagatcatcattaatatcataaacaatcttcattacgaccccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaac 16758944  T
Q  128 aagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcag 188  Q
     || | ||| ||| ||||  |||||||||| ||| | ||||  |||| ||||| |||||||    
T  16758945 gagcattctgtaactaggcaactcgcgaggtgagggcctctacttgctatggcgagttcag 16759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 262
Target Start/End: Original strand, 33681325 - 33681437
Alignment:
Q  150 tcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattcttt 249  Q
    |||||||||||||| ||||| | |||||||| |||||||||   | || ||||  ||||||||| ||||||||||||||||||||||| || || |||||    
T  33681325 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttccaggttcaatctcattctccaatcttt 33681424  T
Q  250 cctaatcattatt 262  Q
    |||||||||||||    
T  33681425 cctaatcattatt 33681437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 20918917 - 20919029
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| |||||||| ||||| ||  |||||| | ||||| ||||||||||||||| |||||||||    
T  20918917 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaatttaaattcta-agtcttttcaggttcaatctcattctacattct 20919014  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  20919015 ttcctaatcattatt 20919029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21342275 - 21342389
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| ||||||||||   || |||||||||||||  ||||||||||||| | | |||||||||||||||||  |||||||| |||| |||| |    
T  21342275 atcatcataaatcagcttcacaatacagcattaatattataattaatattcataaccaccccaaggttcaactctcaacaactcgtgcgacaacgatcgc 21342374  T
Q  116 aaaatcctaaacaag 130  Q
    |||| ||||||||||    
T  21342375 aaaaacctaaacaag 21342389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21347140 - 21347254
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| ||||||||||   || |||||||||||||  ||||||||||||| | | |||||||||||||||||  |||||||| |||| |||| |    
T  21347140 atcatcataaatcagcttcacaatacagcattaatattataattaatattcataaccaccccaaggttcaactctcaacaactcgtgcgacaacgatcgc 21347239  T
Q  116 aaaatcctaaacaag 130  Q
    |||| ||||||||||    
T  21347240 aaaaacctaaacaag 21347254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 20135501 - 20135615
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa--gtttcattctacaatctttccaggttcaatctcatcctacatt 245  Q
    |||||||||| |||||  |||| | |||||||| ||||| ||||||| | |||||  ||||||||||| | ||||||||||| |||||||||||||||||    
T  20135501 actcgcgaggtgagagcttctgctcgccatggcgagttc-ggtcagaattccaaaatgtttcattcta-agtctttccaggtccaatctcatcctacatt 20135598  T
Q  246 ctttcctaatcattatt 262  Q
    |||||||||||||||||    
T  20135599 ctttcctaatcattatt 20135615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 21473126 - 21473203
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | ||||||| |||||||||    
T  21473126 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggtttaactctcaa 21473203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 21477699 - 21477776
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||| ||||||    
T  21477699 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaattctcaa 21477776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 22355920 - 22355878
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22355920 ttccaggttcaatctcatcctacattctttcctaatcattatt 22355878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 22357606 - 22357564
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22357606 ttccaggttcaatctcatcctacattctttcctaatcattatt 22357564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 21754350 - 21754463
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcagg-tcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | |||||||| |||||||| |||| ||| ||||  ||||||||| | |||| |||||||||||||| | || || ||    
T  21754350 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaaa-attcattctaaagtcttcccaggttcaatctctttctccaatc 21754447  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  21754448 tttcctaatcattatt 21754463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 20846965 - 20846923
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  20846965 ttccaggttcaatctcatcctacattcttacctaatcattatt 20846923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 21027055 - 21027097
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  21027055 ttccaggttcaatctcatcctacattcttacctaatcattatt 21027097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 27250475 - 27250433
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  27250475 ttccaggttcaatcccatcctacattctttcctaatcattatt 27250433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 38801205 - 38801095
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    |||||||||||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| |||||        |||   |||||||||||||| ||||||    
T  38801205 taggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtt--------caa---ttccaggttcaatcacatcct 38801117  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||    
T  38801116 acattctttcctaatcattatt 38801095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 20248592 - 20248705
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    |||||||||||| || ||||  | |||||||| ||||||||| ||| ||| ||||  ||||||||| | ||| ||||||||||||||||| || |  |||    
T  20248592 ctcgcgaggcgatagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaagtctctccaggttcaatctcattctccgatct 20248690  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  20248691 ttcctaatcattatt 20248705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 52927731 - 52927674
Alignment:
Q  205 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||| | ||||||||||||||||||||||| || || |||||| |||||||||||    
T  52927731 ttcattccaaaatctttccaggttcaatctcattctccaatctttcataatcattatt 52927674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 20091257 - 20091167
Alignment:
Q  173 gccatggctagttcaggtcagattcccaa--agtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||| ||||||||||||| ||||||   ||||||||||| | ||||| ||||| |||||||||| |||||||  ||||||||| ||||    
T  20091257 gccatggcgagttcaggtcagaatcccaagttgtttcattcta-agtcttttcaggtccaatctcatcttacattcactcctaatcaatatt 20091167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 22238000 - 22238057
Alignment:
Q  205 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||| | |||||||||||||| |||||||| || || |||||||||| |||||||    
T  22238000 ttcattccaaaatctttccaggtttaatctcattctccaatctttcctaaccattatt 22238057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 17061899 - 17061653
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||| | || |||||||||||||| ||||||||| ||||||||| |    
T  17061899 atcatcataaatcagcttcacagatcattattaatattatatgtaatattcataactaccccatggttcaactctcaacgactcgtgcgacaaagatcgc 17061800  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||| ||||  | ||||| || |||||||||||||||| |||||||| |||||| |    
T  17061799 aaaatcctaaacaagcattctgtaaataggtcactcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaagttttattctaaa 17061700  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17061699 atctatccaggttcaatctcattctacattctttcctaatcattatt 17061653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 44116687 - 44116932
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||| ||||||||| | ||||||| |    
T  44116687 atcatcataaatcagtttcacatatcatcattaatattatatatattattcataactaccccaaggttcaaccctcaacgactcgtgcaataaagatcgc 44116786  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    |||||||||||| ||   ||| ||| |  ||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||| |    
T  44116787 aaaatcctaaactagcgttctgtaactgagtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattcta-a 44116885  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  44116886 atctttccgggttcaatctcattctacattctttcctaatcattatt 44116932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 12756655 - 12756410
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||| ||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  12756655 atcatcataaatcagcatcacagatcatcattaatattatatacaatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 12756556  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    |||||||||||||||   | | ||| | ||  |||||||||||||||| ||||  | |||||||  |||||||||||| |||| |||  ||||||||  |    
T  12756555 aaaatcctaaacaaggcttttgtaattgggcaactcgcgaggcgagagcctctactcgccatggtgagttcaggtcagcttccaaaaagttcattcttaa 12756456  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||   ||||||||||||||||| ||||||||||||||||||||||||    
T  12756455 at-aatccaggttcaatctcattctacattctttcctaatcattatt 12756410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 9509498 - 9509617
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9509498 ggtcactcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctac 9509597  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  9509598 attctttcctaatcattatt 9509617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 3564175 - 3564057
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    ||||||||||||||||||||  | || | ||  |||| ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  3564175 ggtcactcgcgaggcgagagcatttgctcgctgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctaca 3564076  T
Q  244 ttctttcctaatcattatt 262  Q
    |||||||||||||||||||    
T  3564075 ttctttcctaatcattatt 3564057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 38227723 - 38227908
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    |||||||||||||| ||  |||||||| |||||| || ||||| |||||  | | | ||| |  || |||||||||||||||||||| ||||| | |||     
T  38227723 caaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggcactctgtttatgggtcactcgcgaggcgagagcctctgctcgccg 38227822  T
Q  177 tggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38227823 tggcgagttcaggtcagaatccaaaaagtttcattcta-aatctttccaggttcaatctcattctacattctttcctaatcattatt 38227908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 15143850 - 15143730
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatccta 241  Q
    |||||||||||||||||||||| ||||| | |||||||| ||| ||||||||| || ||||  ||||||||| ||||||||||||||||||||||| |||    
T  15143850 taggtcactcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcattcta 15143751  T
Q  242 cattctttcctaatcattatt 262  Q
     | ||||||||||||||||||    
T  15143750 aaatctttcctaatcattatt 15143730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 12699141 - 12699260
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaa-agtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||| ||||| ||||| ||||| | ||| |||| ||||||||||||| |||||  |||||||||| |||||||||||||||||||| |||||||||    
T  12699141 ggtcactcacgaggtgagagcctctgctcgccgtggcgagttcaggtcagaatcccacgagtttcattcaacaatctttccaggttcaatttcatcctac 12699240  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  12699241 attctttcctaatcattatt 12699260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 39267586 - 39267339
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||||    
T  39267586 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcacaaggttcaactcataacaactcgtgcgacaaagatcac 39267487  T
Q  116 aaa-atcctaaacaagtaatctttaaatag--gtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattc 211  Q
    |   | ||||||||||  ||  |  ||||   ||  ||| ||||||||||| ||||| | |||||||| ||||||| |||||||| ||||||||||||||    
T  39267486 atttaacctaaacaaggcattctgtaatactagtg-ctcccgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattc 39267389  T
Q  212 tacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    || | ||||||||||||||||||||||||||||||||||||||||| ||||    
T  39267388 ta-agtctttccaggttcaatctcatcctacattctttcctaatcaatatt 39267339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 18302494 - 18302599
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| |||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  18302494 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattatccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 18302591  T
Q  248 ttcctaat 255  Q
    ||||||||    
T  18302592 ttcctaat 18302599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 9751490 - 9751243
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| ||||||||| |    
T  9751490 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcgc 9751391  T
Q  116 a---aaatcctaaacaagtaat-ctttaa-ataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcat 209  Q
    |   |||  |||||||||  || || ||| | | | | ||||||||||||||| ||||| |  ||||||| ||||||| ||| |||| ||||||||||||    
T  9751390 atttaaa--ctaaacaaggcattctgtaacacaag-cgctcgcgaggcgagagcctctgctcaccatggcgagttcag-tcaaattctccaaagtttcat 9751295  T
Q  210 tctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| | ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  9751294 tcta-agtctttccaggttcaacctcatcctacattctttcctaatcaatatt 9751243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 262
Target Start/End: Complemental strand, 12255707 - 12255484
Alignment:
Q  39 atcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatcttt 138  Q
    ||||||||||||||  |||| ||| ||||| |||| | |||  ||||||||||||  |||||||  ||||||||| |||||||||||||||| | ||| |    
T  12255707 atcatcattaatatattatacaatcttcattactaccccaaaattcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaagcattctgt 12255608  T
Q  139 aaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatc 238  Q
    || | ||  |||||||||||||||| ||||  | || ||||| |||||||||   | |||||||  ||||||||  ||   |||||||||||||||||      
T  12255607 aactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaattcattcttaaactattccaggttcaatctcaat 12255508  T
Q  239 ctacattctttcctaatcattatt 262  Q
    ||| | ||||||||||||||||||    
T  12255507 ctagaatctttcctaatcattatt 12255484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 2280045 - 2279883
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    |||||||||| ||||||||| |||| ||| ||||| ||||| || | | |||||||||||||||||  |||||||  ||||||||| |||||||||||||    
T  2280045 cagcttcacagatcatcattgatatcataaataatcttcattacgaccccaaggttcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaac 2279946  T
Q  128 aagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggt 190  Q
    ||| | ||| ||| ||||  |||||||||||||| | ||||  | || ||||| |||||||||    
T  2279945 aagcattctataactaggcaactcgcgaggcgagggcctctactcgctatggcgagttcaggt 2279883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 28505106 - 28504994
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||||||||| | ||| |||||||||| | ||||| ||||||||||||||| |||||||||    
T  28505106 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattcta-agtcttttcaggttcaatctcattctacattct 28505009  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  28505008 ttcctaatcattatt 28504994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 10063761 - 10063684
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||||||| ||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  10063761 atcatcataaatcagcttcacatatcttcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 10063684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 2832110 - 2831999
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||  ||||||| |||||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||    
T  2832110 ctcgcgaggcgagagcctctgctcgccatggtgagttcag-tcagattctccaaagtt-cattcta-agtctttctaggttcaatctcatcctacattct 2832014  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  2832013 ttcctaatcaatatt 2831999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 38898360 - 38898287
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 89  Q
    ||||||||||| ||||||| || |||||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  38898360 atcatcataaatcagcttcgcagatcatcattaatattataaataatattcataactatcccaaggatcaactc 38898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 19486682 - 19486605
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||| ||  ||||||||||||||| |  ||||||||||||||||    
T  19486682 atcatcataaatcagcttcacagatcatcattaatattttaattaatattcataactaccctaaggttcaactctcaa 19486605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 810936 - 810822
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||  | |||||||| ||||||||| ||| ||| ||||  ||||||||| | |||||||||||||||||| || || || ||    
T  810936 actcgcgaggcgagagcctctactcgccatggcgagttcaggtacag-ttcacaaaaattcattctaaattctttccaggttcaatcttattctccaatc 810838  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  810837 tttcctaatcattatt 810822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 16385993 - 16385951
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16385993 ttccaggttcaatctcatcctacattctttcctaatcattatt 16385951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 34201099 - 34201211
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    |||||||||| |||| ||||| | |||||||| ||||||| |||||||| ||||| |||||||||| | ||||| ||||||||||||||| ||| |||||    
T  34201099 ctcgcgaggcaagagcctctgctcgccatggcgagttcag-tcagattctccaaattttcattcta-agtctttacaggttcaatctcattctaaattct 34201196  T
Q  248 ttcctaatcattatt 262  Q
    ||| | |||||||||    
T  34201197 ttcttgatcattatt 34201211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 44014545 - 44014602
Alignment:
Q  205 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||    
T  44014545 ttcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattatt 44014602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 40443763 - 40443805
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  40443763 ttccaggttcaatctcatcctaaattctttcctaatcattatt 40443805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 27847645 - 27847541
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| ||||| |||| ||||||||||| | ||||| |||||| ||||           |||||||||||||||||||     
T  27847645 ggtcactcgcgaggcgagagcctctgcttgccgtggcgagttcaggtcaaaatcccataagtttaattc-----------caggttcaatctcatcctaa 27847557  T
Q  243 attctttcctaatcat 258  Q
    ||||||||||||||||    
T  27847556 attctttcctaatcat 27847541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 15754689 - 15754580
Alignment:
Q  153 cgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaag--tttcattctacaatctttccaggttcaatctcatcctacattctttc 250  Q
    ||||||||||| || || | ||| |||| ||||| |||||||||| ||||   |||||||||| | | ||||||||||||||||||| |||| |||||||    
T  15754689 cgaggcgagagcctatgctcgccgtggcaagttc-ggtcagattctcaaaagttttcattcta-agtttttccaggttcaatctcattctactttctttc 15754592  T
Q  251 ctaatcattatt 262  Q
    ||||||||||||    
T  15754591 ctaatcattatt 15754580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 2832230 - 2832145
Alignment:
Q  31 cttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcaca 116  Q
    ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||| |||||||    
T  2832230 cttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcaca 2832145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 11995835 - 11995771
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 213  Q
    ||||||||||||||| ||||| |||||||||| |||||| ||||||||| ||||| ||||||||||    
T  11995835 ctcgcgaggcgagagcctctgcttgccatggcgagttca-gtcagattctccaaattttcattcta 11995771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 16091951 - 16092055
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    ||||||||||||||||||||||||||||||| ||  | |||  ||| | ||||| |||||||  ||   ||||||| ||||||||| ||||| | |||||    
T  16091951 cagcttcacatatcatcattaatattatatacaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccgtaaac 16092050  T
Q  128 aagta 132  Q
    |||||    
T  16092051 aagta 16092055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 40443698 - 40443754
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 200  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| |||||    
T  40443698 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 40443754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 9177597 - 9177562
Alignment:
Q  23 taaagcagcttcacatatcatcattaatattatata 58  Q
    |||| |||||||||||||||||||||||||||||||    
T  9177597 taaaacagcttcacatatcatcattaatattatata 9177562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 26212371 - 26212406
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaat 255  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26212371 ttccaggttcaatctcatcctacattcttacctaat 26212406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 15554 - 15308
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||||  |||||||| | ||||||||||||||||| || |||||| |||||||||      
T  15554 atcatcacaaatcagcttcacagatcatcattaatattatatataatacacataactaccccaaggttcaactctcaacgattcgtgcgacaaagatcga 15455  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    |||||||||| |||||| | | |||||||||||||||||||||||||| ||||| | || ||||| |||||||||||||||||||||||||||||||| |    
T  15454 aaaatcctaagcaagtattttgtaaataggtcactcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagtttcattctaaa 15355  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  15354 atctatccagattcaatctcattctacattctttcctaatcattatt 15308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 7e-61; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 18456897 - 18457142
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||||| ||||||||| |    
T  18456897 atcatcataaatcagcttcacagatcatcattaatattatatataatattcataactgccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 18456996  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    |||||||| ||||||   ||| ||| | ||  |||||||||||||||| ||||  | ||||||||||||||||||||| |||| |||  ||||||||  |    
T  18456997 aaaatcctgaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggtcagcttccaaaaagttcattct-ta 18457095  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||   ||||||||||||||||| ||||||||||||||||||||||||    
T  18457096 attaatccaggttcaatctcattctacattctttcctaatcattatt 18457142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 22780041 - 22779920
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    ||||| |||||||||||||||| || || ||||| |||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  22780041 taggttactcgcgaggcgagagcctttgcttgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcct 22779942  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||    
T  22779941 acattctttcctaatcattatt 22779920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 29808691 - 29808576
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct-acaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||    
T  29808691 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 29808592  T
Q  247 tttcctaatcattatt 262  Q
    ||| ||||||||||||    
T  29808591 ttttctaatcattatt 29808576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 29060850 - 29060968
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||  | | | |||| ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  29060850 ggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctaca 29060949  T
Q  244 ttctttcctaatcattatt 262  Q
    ||| |||||||||||||||    
T  29060950 ttccttcctaatcattatt 29060968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 20594081 - 20594197
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatccta 241  Q
    |||||||||||||||||||||| ||||| | ||| | || ||||||||||||||| |||||  || ||||||||||||||||||||||||||||||||||    
T  20594081 taggtcactcgcgaggcgagagcctctgctcgccgtagcgagttcaggtcagatttccaaaagtttattctacaatctttccaggttcaatctcatccta 20594180  T
Q  242 cattctttcctaatcat 258  Q
    ||||||| |||||||||    
T  20594181 cattcttccctaatcat 20594197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 19303352 - 19303234
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||| ||||||||||| ||||| | ||| |||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||| ||||    
T  19303352 ggtcactctcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattcta-aatcttttcaggttcaatctcattctac 19303254  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  19303253 attctttcctaatcattatt 19303234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 28496280 - 28496166
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | |||||||| |||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||| ||||||||    
T  28496280 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattcta-agtctttccaggttcaatctcattctacattc 28496182  T
Q  247 tttcctaatcattatt 262  Q
    ||| ||||||||||||    
T  28496181 ttttctaatcattatt 28496166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 78 - 260
Target Start/End: Complemental strand, 18409704 - 18409522
Alignment:
Q  78 aaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccat 177  Q
    ||||||||||||||||  |||||||| |||||| ||  ||||||||||  | | | ||| |   | ||||||| | |||||||||| ||||| | ||| |    
T  18409704 aaggttcaactctcaataactcgtgcaacaaaggtcgtaaaatcctaacaaggcactctgtttctgggtcactagagaggcgagagcctctgctcgccgt 18409605  T
Q  178 ggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatta 260  Q
    ||| ||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  18409604 ggcgagttcaggtcagaattcaaaaagtttcattcta-aatctttccaggttcaatctcattctacattctttcctaatcatta 18409522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 17287608 - 17287489
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||| |||| | |||| ||||  | ||| |||| |||| |||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  17287608 ggtcactcacgagacaagagcctctaatcgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggtacaatcacatcctac 17287509  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  17287508 attctttcctaatcattatt 17287489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 21939699 - 21939811
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| |||||||| ||||||||| |||||| | |||||||||| ||||||||||||||||||||    
T  21939699 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagttttattcta-agtctttccaggctcaatctcatcctacattct 21939796  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  21939797 ttcctaatcaatatt 21939811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 25644504 - 25644618
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | |||||||||| |||||||||||||| ||||||||| || ||||||| | ||||||||||||||||   |||||||| ||||||||| |    
T  25644504 atcatcatatatcagcttcacagatcatcattaatatcatatataatctttataactaccccaaggttcaactctcagcaactcgtgcgacaaagatcgc 25644603  T
Q  116 aaaatcctaaacaag 130  Q
    |||| ||||||||||    
T  25644604 aaaaacctaaacaag 25644618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 8227449 - 8227372
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||| |  ||||||||||||||||    
T  8227449 atcatcataaatcagcttcacagatcatcattaatattataattaatattcataactaccctaaggttcaactctcaa 8227372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 20360772 - 20360664
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||| | | |||||||| ||||||||||||| ||||| |||||||||||           ||||||||||||||||||||    
T  20360772 ggtcactcgcgaggcgagagcctcagctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctac 20360684  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  20360683 attctttcctaatcattatt 20360664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 25629166 - 25629050
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||| | |||| ||| ||| ||||||| | || ||||  || |||||| ||| ||||||||||||||||||| |||||    
T  25629166 ggtcactcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagtttattctaaaatatttccaggttcaatctcattctaca 25629067  T
Q  244 ttctttcctaatcatta 260  Q
     | ||||||||||||||    
T  25629066 atatttcctaatcatta 25629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 19652512 - 19652623
Alignment:
Q  151 cgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttc 250  Q
    ||||||||||||| ||||  | |||||||| |||||||||   |||| ||||  ||||||||| | ||||||||||||||||||||| || || ||||||    
T  19652512 cgcgaggcgagagcctctactcgccatggcgagttcaggtacaattcacaaaaattcattctaaagtctttccaggttcaatctcattcttcaatctttc 19652611  T
Q  251 ctaatcattatt 262  Q
    ||||||||||||    
T  19652612 ctaatcattatt 19652623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 18821631 - 18821523
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||| ||||||||||||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||           ||||||||||||||||||||    
T  18821631 ggtcgctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctac 18821543  T
Q  243 attctttcctaatcattatt 262  Q
    ||||| ||||||||||||||    
T  18821542 attctctcctaatcattatt 18821523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 15894237 - 15894123
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaa--agtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    ||||||||| ||||||||||| | |||||||| ||||||||||||| ||||||    |||||||||| | ||||||||||| |||||||||| |||||||    
T  15894237 ctcgcgaggtgagagactctgctcgccatggcgagttcaggtcagaatcccaagttctttcattcta-agtctttccaggtccaatctcatcttacattc 15894139  T
Q  247 tttcctaatcattatt 262  Q
      ||||||||| ||||    
T  15894138 actcctaatcaatatt 15894123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 4185629 - 4185516
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||  | |||||||| ||||||||| ||| ||| ||||  ||||||||| | ||||||||||||||||||||  |||||||||    
T  4185629 ctcgcgaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaactctttccaggttcaatctcactctacattct 4185531  T
Q  248 ttcctaatcattatt 262  Q
    ||| ||||| |||||    
T  4185530 ttcataatcgttatt 4185516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 4668019 - 4667906
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||  | |||||||| ||||||||| ||| ||| ||||  ||||||||| | ||||||||||| ||||||||  |||||||||    
T  4668019 ctcgcgaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaactctttccaggtccaatctcactctacattct 4667921  T
Q  248 ttcctaatcattatt 262  Q
    ||||||||| |||||    
T  4667920 ttcctaatcgttatt 4667906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 20638029 - 20637987
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20638029 ttccaggttcaatctcatcctacattctttcctaatcattatt 20637987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 25611530 - 25611416
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa--gtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    ||||||||||||||| ||||| |  ||||||| ||||||||||||| ||| ||   ||||||||||| | ||||||||||| ||||||||| || |||||    
T  25611530 ctcgcgaggcgagagcctctgctctccatggcgagttcaggtcagaatcctaagttgtttcattcta-agtctttccaggtccaatctcatgctgcattc 25611432  T
Q  247 tttcctaatcattatt 262  Q
      ||||||||||||||    
T  25611431 actcctaatcattatt 25611416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 27333089 - 27332981
Alignment:
Q  150 tcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattcttt 249  Q
    |||||||||||||| ||||  | |||||||| |||||||||   | || ||||  ||||||||| ||||||||||||||||| ||||| ||| | |||||    
T  27333089 tcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaacttcattctaaaatctttccaggttcaacctcattctaaaatcttt 27332990  T
Q  250 cctaatcat 258  Q
    |||||||||    
T  27332989 cctaatcat 27332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 27393829 - 27393721
Alignment:
Q  150 tcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattcttt 249  Q
    |||||||||||||| ||||  | |||||||| |||||||||   | || ||||  ||||||||| ||||||||||||||||| ||||| ||| | |||||    
T  27393829 tcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaacttcattctaaaatctttccaggttcaacctcattctaaaatcttt 27393730  T
Q  250 cctaatcat 258  Q
    |||||||||    
T  27393729 cctaatcat 27393721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 1561622 - 1561731
Alignment:
Q  153 cgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaag--tttcattctacaatctttccaggttcaatctcatcctacattctttc 250  Q
    ||||||||||| || || | ||| |||| ||||| |||||||||| ||||   |||||||||| | | ||||||||||||||||||| |||| |||||||    
T  1561622 cgaggcgagagcctatgctcgccgtggcaagttc-ggtcagattctcaaaagttttcattcta-agtttttccaggttcaatctcattctactttctttc 1561719  T
Q  251 ctaatcattatt 262  Q
    ||||||||||||    
T  1561720 ctaatcattatt 1561731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 4189271 - 4189384
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||  | |||||| | |||| |||| ||| ||| ||||  ||||||||| | ||||||||||| ||||||||  |||||||||    
T  4189271 ctcgcgaggcgagagcctctactcgccatgacgagtttaggttcag-ttcacaaaaattcattctaaactctttccaggtccaatctcactctacattct 4189369  T
Q  248 ttcctaatcattatt 262  Q
    ||||||||| |||||    
T  4189370 ttcctaatcgttatt 4189384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 4674866 - 4674753
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||  | |||||| | |||| |||| ||| ||| ||||  ||||||||| | ||||||||||| ||||||||  |||||||||    
T  4674866 ctcgcgaggcgagagcctctactcgccatgacgagttaaggttcag-ttcacaaaaattcattctaaactctttccaggtccaatctcactctacattct 4674768  T
Q  248 ttcctaatcattatt 262  Q
    ||||||||| |||||    
T  4674767 ttcctaatcgttatt 4674753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 31155137 - 31155091
Alignment:
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||    
T  31155137 atctttccaggttcaatctcattctacattctttcccaatcgttatt 31155091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 25603188 - 25603078
Alignment:
Q  153 cgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa--gtttcattctacaatctttccaggttcaatctcatcctacattctttc 250  Q
    ||||||||||| ||||| | |||||||  |||||| |||||| ||| ||   ||||||||||| | ||||||||||| |||||||||| | |||||  ||    
T  25603188 cgaggcgagagcctctgctcgccatggtgagttcaagtcagaatcctaagttgtttcattcta-agtctttccaggtccaatctcatcatgcattcactc 25603090  T
Q  251 ctaatcattatt 262  Q
    ||||||||||||    
T  25603089 ctaatcattatt 25603078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 27325374 - 27325278
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagat 112  Q
    ||||||||| | || ||||||| ||||||||||||||  |||||| |  |||| |||||| |||||||||||||  ||  |||||||| ||||||||    
T  27325374 atcatcatataacaacttcacagatcatcattaatatcttatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagat 27325278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 16920379 - 16920337
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||| |||||| |||||||||||||| ||||||||||||    
T  16920379 ttccaggtacaatcttatcctacattcttttctaatcattatt 16920337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 16920445 - 16920395
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga 194  Q
    |||||||||| ||||||||| ||||| | |||||||| |||||||||||||    
T  16920445 ggtcactcgcaaggcgagagcctctgctcgccatggcgagttcaggtcaga 16920395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 20638095 - 20638027
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 211  Q
    |||||||||||||| ||||| || || | ||| |||| ||||||||||||| ||||| |||||||||||    
T  20638095 ggtcactcgcgaggtgagagcctttgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 20638027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 22831811 - 22831867
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 200  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||| ||| |||||    
T  22831811 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca 22831867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 31164589 - 31164553
Alignment:
Q  224 aggttcaatctcatcctacattctttcctaatcatta 260  Q
    |||| |||||||||||||||||| |||||||||||||    
T  31164589 aggtccaatctcatcctacattcattcctaatcatta 31164553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 85 - 262
Target Start/End: Complemental strand, 1947 - 1770
Alignment:
Q  85 aactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagt 184  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||| | ||| ||| | |||||||||||||||||||| ||||| | |||||||| | |    
T  1947 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaat 1848  T
Q  185 tcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1847 tcaggtcagatttccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattatt 1770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 20364 - 20119
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||| | |    
T  20364 atcatcataaatcagcttcacagatcatcattaacattatatacaatattcataactatcccaaggttcaactctcaacgactcgtgcgacaaagaccgc 20265  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    |||||||||||||||   ||| ||| ||||  ||| |||||||||||| ||||  | |||||||| |||||||||||| |||| |||  ||||||||  |    
T  20264 aaaatcctaaacaaggcttctgtaattaggcaacttgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattct-ta 20166  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||   ||||||||||||||||| ||||||||||||||| ||||||||    
T  20165 attaatccaggttcaatctcattctacattctttcctactcattatt 20119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 12111 - 12356
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||| || | ||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||  ||||||||| |    
T  12111 atcatcataaatcagcttcacagattaacattaatattatatacaatattcataactaccccaaggttcaactctcaacgactcgtgtgacaaagatcgc 12210  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 215  Q
    ||||||||||||| |   ||| ||| | ||  |||||||||| ||||| ||||  | |||||||| |||||||||||| |||| |||  ||||||||  |    
T  12211 aaaatcctaaacagggcttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtcagtttccaaaaagttcattct-ta 12309  T
Q  216 atctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||   ||||||||||||||||| ||||||||||||||||||||||||    
T  12310 attaatccaggttcaatctcattctacattctttcctaatcattatt 12356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 52221 - 52340
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  52221 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctac 52320  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  52321 attctttcctaatcattatt 52340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 167791 - 167683
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||| ||||           |||||||||||||||||     
T  167791 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatcta-----------ggttcaatctcatcctaa 167703  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  167702 attctttcctaatcattatt 167683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 23660265 - 23660450
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    |||||||||||||||||  |||||||| | |||| |||||||| |||||  | | | ||| |   | |||||||| ||||||||||| ||||| | |||     
T  23660265 caaggttcaactctcaataactcgtgcaataaaggtcacaaaaacctaacaaggcactctgtttctgggtcactcacgaggcgagagcctctgctcgccg 23660364  T
Q  177 tggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23660365 tggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattatt 23660450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 27753884 - 27754003
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||| |||||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27753884 ggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctac 27753983  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  27753984 attctttcctaatcattatt 27754003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 22737994 - 22737873
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    |||||||||||||||||||||| ||||| | ||| |||| ||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  22737994 taggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagttcagaatcccacaagtttcattctacaatctttctaggttcaatctcatcct 22737895  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||    
T  22737894 acattctttcctaatcattatt 22737873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 32451741 - 32451622
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  32451741 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcctac 32451642  T
Q  243 attctttcctaatcattatt 262  Q
    ||||| ||||||||||||||    
T  32451641 attctctcctaatcattatt 32451622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 298626 - 298508
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||     
T  298626 ggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattcta-aatctttccaggttcaatctcatcctat 298528  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  298527 attctttcctaatcattatt 298508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 22731041 - 22730926
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    ||||| |||||||||| || || |  || |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22731041 actcgtgaggcgagagcctttgctccccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 22730942  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  22730941 tttcctaatcattatt 22730926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 23076755 - 23076868
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    |||||||||||||||| ||||  | ||| |||| ||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  23076755 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattccaaagtttcattcta-aatctttccaggtccaatctcatcctacattct 23076853  T
Q  248 ttcctaatcattatt 262  Q
    |||||||| ||||||    
T  23076854 ttcctaattattatt 23076868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 19672010 - 19672122
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | |||||||||| || ||||||||||||||| |||||||||||||||| | |||||||||||||||||  |||||||| ||||||||| |    
T  19672010 atcatcatagatcagcttcacagattatcattaatattataaataatattcataacta-cccaaggttcaactctcaacaactcgtgcgacaaagatcgc 19672108  T
Q  116 aaaatcctaaacaa 129  Q
    ||||||||||||||    
T  19672109 aaaatcctaaacaa 19672122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 22337425 - 22337543
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagat-tcccaaagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||  | ||| |||| | |||||||||||  ||  |||||||||||||| ||||||||||||||||||||||||||||    
T  22337425 ggtcactcgcgaggcgagagcctctactcgccgtggcgaattcaggtcagaactcaaaaagtttcattcta-aatctttccaggttcaatctcatcctac 22337523  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  22337524 attctttcctaatcattatt 22337543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 23071768 - 23071656
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||||||||| | ||| |||||||||| | ||||| ||||||||||||||| |||||||||    
T  23071768 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattcta-agtcttttcaggttcaatctcattctacattct 23071671  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  23071670 ttcctaatcattatt 23071656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 23708545 - 23708383
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    |||||||||| |||||||||||||| ||| | ||| ||||| || | | |||||||||||| ||||  |||||||| ||||||||| |||||||||||||    
T  23708545 cagcttcacagatcatcattaatatcataaacaatcttcattacgaccccaaggttcaactatcaacaactcgtgcgacaaagatcgcaaaatcctaaac 23708446  T
Q  128 aagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggt 190  Q
    ||| | ||| ||| | ||| |||||| ||||||||| ||||  | || ||||| |||||||||    
T  23708445 aagcattctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagttcaggt 23708383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 20309480 - 20309522
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20309480 ttccaggttcaatctcatcctacattctttcctaatcattatt 20309522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 23654145 - 23654103
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23654145 ttccaggttcaatctcatcctacattctttcctaatcattatt 23654103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 22134020 - 22133910
Alignment:
Q  150 tcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattcttt 249  Q
    |||||||||||||| ||||| | |||||||| ||||||| |||| ||| |||| || ||||||| | |||| | |||||||||||||| || || |||||    
T  22134020 tcgcgaggcgagagcctctgctcgccatggcgagttcagttcag-ttcacaaaatt-cattctaaagtcttcctaggttcaatctcattctccaatcttt 22133923  T
Q  250 cctaatcattatt 262  Q
    |||||||||||||    
T  22133922 cctaatcattatt 22133910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 28406297 - 28406407
Alignment:
Q  152 gcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttc 250  Q
    |||||||||||| ||||  | |||||||| ||||||||| ||| ||| |||| ||| |||||| ||||||| ||||||||||||||| || || ||||||    
T  28406297 gcgaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaattttattctaaaatctttacaggttcaatctcattctccaatctttc 28406395  T
Q  251 ctaatcattatt 262  Q
    ||||| ||||||    
T  28406396 ctaattattatt 28406407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 23286236 - 23286278
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  23286236 ttccatgttcaatctcatcctacattctttcctaatcattatt 23286278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 37862 - 37820
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  37862 ttccaggttcaatctcatcctacatcttttcctaatcattatt 37820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 23004944 - 23004974
Alignment:
Q  28 cagcttcacatatcatcattaatattatata 58  Q
    |||||||||||||||||||||||||||||||    
T  23004944 cagcttcacatatcatcattaatattatata 23004974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 23286168 - 23286218
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtca 192  Q
    |||||||||||||||||||||| ||||| | ||| |||| |||||||||||    
T  23286168 taggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtca 23286218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 20309414 - 20309470
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 200  Q
    |||||||||||||||||||| ||||| |  || |||| ||||||||||||| |||||    
T  20309414 ggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcaggtcagaatccca 20309470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 20520050 - 20519978
Alignment:
Q  97 ctcgtgctacaaagatcacaaaatcctaaacaag-taatctttaaataggtcactcgcgaggcgagagactct 168  Q
    ||||||| ||||||||| ||||| |||||||||| || ||| ||| ||||  |||||||||||||||| ||||    
T  20520050 ctcgtgcaacaaagatcgcaaaaccctaaacaaggtattctgtaactaggcaactcgcgaggcgagagcctct 20519978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 25876 - 25758
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||    
T  25876 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaaattcattctacaatcttttcaggttcaatctcatcctaca 25777  T
Q  244 ttctttcctaatcattatt 262  Q
    |||||||||||||||||||    
T  25776 ttctttcctaatcattatt 25758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 33306 - 33187
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||| ||||||||||||| || || | ||| |||| ||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||||||||    
T  33306 ggtcacacgcgaggcgagagcctttgctcgccgtggcgagttcaggtaagacttccaaaagtttcattctaaaatctttccaggttcaatctcatcctac 33207  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  33206 attctttcctaatcattatt 33187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 339762 - 339644
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  339762 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaaaagttcattctacaatctttccaggttcaatctcatcctaca 339663  T
Q  244 ttctttcctaatcattatt 262  Q
    ||| |||||||||||||||    
T  339662 ttcattcctaatcattatt 339644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 20710 - 20831
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    |||||| ||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  20710 taggtcgctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatctttccaggttcaatctcatcct 20809  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||    
T  20810 acattctttcctaatcattatt 20831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 79268 - 79116
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  79268 atcatcataaatcagcttcactgatcatcattaatattatatacaatattcataactaccccaaggttcaactctcaatgactcgtgcgacaaagatcgc 79169  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactct 168  Q
    |||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||    
T  79168 aaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctct 79116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 77 - 262
Target Start/End: Complemental strand, 17093 - 16908
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    ||||||| |||||||||  |||||||| |||||| || |||||||||||  | ||| ||| |   | |||||||||||||||||||| ||||| |  ||     
T  17093 caaggtttaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaataaggtactctgtttctgggtcactcgcgaggcgagagcctctgctctccg 16994  T
Q  177 tggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16993 tggcgagttcaggtcagaattccaaaagtttcattcta-aatctttccaggttcaatctcattctacattctttcctaatcattatt 16908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 79096 - 79055
Alignment:
Q  221 tccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  79096 tccaggttcaatctcattctacattccttcctaatcattatt 79055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 3779 - 3898
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||    
T  3779 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcctac 3878  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  3879 attctttcctaatcattatt 3898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 652 - 770
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||  | |||  ||| ||||||| ||||||||| |||||||||||||| | |||||| |||||||||||||| |||||    
T  652 ggtcactcgcgaggcgagagcctctactcgccgcggcgagttcagttcagattccaaaagtttcattctaaattctttctaggttcaatctcattctaca 751  T
Q  244 ttctttcctaatcattatt 262  Q
    |||||| ||||||||||||    
T  752 ttcttttctaatcattatt 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 4817 - 4936
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct-acaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||| ||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  4817 ggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctac 4916  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||| ||||||||||||    
T  4917 attcttttctaatcattatt 4936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 12399 - 12518
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct-acaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||| ||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  12399 ggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctac 12498  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||| ||||||||||||    
T  12499 attcttttctaatcattatt 12518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 22351 - 22470
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct-acaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||| ||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  22351 ggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctac 22450  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||| ||||||||||||    
T  22451 attcttttctaatcattatt 22470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 2160 - 2279
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||||| ||||||| || ||||  | |||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2160 ggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctac 2259  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  2260 attctttcctaatcattatt 2279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 207324 - 207212
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| |||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  207324 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 207227  T
Q  248 ttcctaatcattatt 262  Q
     ||||||||| ||||    
T  207226 ctcctaatcaatatt 207212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 207459 - 207362
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 113  Q
    ||||||||| | || ||||||| |||||||||||||| || |||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  207459 atcatcatataacaacttcacaaatcatcattaatatcatgtatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 207362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 144 - 258
Target Start/End: Original strand, 13401 - 13516
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  13401 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatcttttcagattcaatctcatcctac 13500  T
Q  243 attctttcctaatcat 258  Q
    ||||||||||||||||    
T  13501 attctttcctaatcat 13516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 262
Target Start/End: Original strand, 34437 - 34548
Alignment:
Q  150 tcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattctt 248  Q
    |||||||||||||| ||||| | |||||||| ||||| |||||||||| ||||| |||||||||| | ||||| ||||||||||||||| ||||||||||    
T  34437 tcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctccaaattttcattcta-agtcttttcaggttcaatctcattctacattctt 34534  T
Q  249 tcctaatcattatt 262  Q
    ||||||||||||||    
T  34535 tcctaatcattatt 34548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 24115 - 23995
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    |||||||||||||||||||||| ||||| | ||  |||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24115 taggtcactcgcgaggcgagagcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctacaat-tttccaggttcaatctcatcct 24017  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||| ||||||||||||||||    
T  24016 acattttttcctaatcattatt 23995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 124894 - 125010
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||||||||   ||||||||||    
T  124894 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttc---ctcatcctac 124990  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  124991 attctttcctaatcattatt 125010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 62932 - 62989
Alignment:
Q  205 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||| ||| ||||||||||||||||||| || || ||||||||||||||||||    
T  62932 ttcattctaaaatatttccaggttcaatctcattctccaatctttcctaatcattatt 62989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 40164 - 40284
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatccta 241  Q
    |||||||| ||||||||||||| ||||| | ||| |||| ||| ||||| |||  || |||||||||||||||||||||||||||||||||||||||||     
T  40164 taggtcacccgcgaggcgagagcctctgctcgccgtggcgagtacaggttagaaaccaaaagtttcattctacaatctttccaggttcaatctcatcctc 40263  T
Q  242 cattctttcctaatcattatt 262  Q
    |||||||||||||||||||||    
T  40264 cattctttcctaatcattatt 40284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 26575 - 26653
Alignment:
Q  184 ttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26575 ttcaggtcagaatccaaaagtttcattctacaatctttccaggtttaatctcatcctacattctttcctaatcattatt 26653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 39680 - 39626
Alignment:
Q  206 tcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatta 260  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  39680 tcattctacattctttccaggttcaatctcattctacattctttcctaatcatta 39626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 59308 - 59196
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||||| ||| | ||| |||||||||| | ||||| ||||||||||||||| |||||||||    
T  59308 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcaggttctctaaattttcattcta-agtcttttcaggttcaatctcattctacattct 59211  T
Q  248 ttcctaatcattatt 262  Q
     ||||||||||||||    
T  59210 gtcctaatcattatt 59196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 16411 - 16292
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa-gtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | |||||||| ||||||||| ||||| ||||| ||||||||| | ||||||||||||||||||||||| |||     
T  16411 ggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattctaa 16312  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  16311 attctttcctaatcattatt 16292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 8344 - 8225
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||  |  || |||| |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  8344 ggtcactcgcgaggcgagagcctctactcaccgtggcgagtttaggccagaattccaaaagtttcattctacaatctttccaggttcaatctcatcctac 8245  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  8244 attctttcctaatcattatt 8225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 39070 - 39187
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| |||  ||||||||||| | ||||||||||||||||||||||| |||||    
T  39070 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccacaagtttcattcaa-aatctttccaggttcaatctcattctaca 39168  T
Q  244 ttctttcctaatcattatt 262  Q
    |||||||||||||||||||    
T  39169 ttctttcctaatcattatt 39187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 40155 - 40337
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 176  Q
    |||||||||||||||||  |||||||| |||||| || ||||  |||||  | ||| ||| |   | |||||||||||||||||||| ||||  | |||     
T  40155 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaacacctaacaaggtactctgtttctgggtcactcgcgaggcgagagcctctactcgccg 40254  T
Q  177 tggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatta 260  Q
    |||| ||||||||||||||| |||||  ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||    
T  40255 tggcgagttcaggtcagatttccaaaagttcattctacaatctgt-caggttcaatctcatcctacattccttcctaatcatta 40337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 51696 - 51577
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||| |||||| ||||| ||||| | ||| |||| ||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  51696 ggtcactagcgaggtgagagcctctgctcgccgtggcgagttcaggtcaaaatcccacaagtttcattcgacaatctttccaggttcaatctcatcctac 51597  T
Q  243 attctttcctaatcattatt 262  Q
    ||||| ||||||||||||||    
T  51596 attctctcctaatcattatt 51577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 824 - 706
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||| | |  || |||| ||||||||||||||| |||||  ||||||||||||||||| ||| ||||||||||| |||||    
T  824 ggtcactcgcgaggcgagagcctccgctcaccgtggcgagttcaggtcagatttccaaaagttcattctacaatcttttcagattcaatctcattctaca 725  T
Q  244 ttctttcctaatcattatt 262  Q
    |||||||||||||||||||    
T  724 ttctttcctaatcattatt 706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 17787 - 17701
Alignment:
Q  177 tggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17787 tggcgagttcaggtcagaatcccacaagtttcattctacaatctatccaggttcaatctcatcctacattctttcctaatcattatt 17701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 225589 - 225731
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | ||||||||||  |||| |||||||| ||||||||| |||||||||| | |||||||||||||||||  |||||||| ||||||||| |    
T  225589 atcatcatatatcagcttcacagttcattattaatatcatatataatcttcataactaccccaaggttcaactctcaacaactcgtgcgacaaagatcgc 225688  T
Q  116 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggc 158  Q
    ||||||||||||||| | ||| ||| || || |||||||||||    
T  225689 aaaatcctaaacaagcattctgtaactatgtaactcgcgaggc 225731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 8784 - 8903
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||| |||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| ||||| |||| ||||||||||| |||||||||||||||||||    
T  8784 ggtcattcgcgaggcgagagcctctactggccgtggcgagttcaggtcagaatcccacaagttccattttacaatctttctaggttcaatctcatcctac 8883  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||| ||||    
T  8884 attctttcctaatcactatt 8903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 80137 - 80025
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||| | ||||||| |||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  80137 ctcgcgaggcgagagcctctgctcgccatgtcgagttcag-tcagattctccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 80040  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  80039 ttcctaatcaatatt 80025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 80272 - 80175
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 113  Q
    ||||||||| | || ||||||| |||||||||||||| || |||| |  |||| |||||| |||||||||||||  ||  |||||||| || ||||||    
T  80272 atcatcatataacaacttcacaaatcatcattaatatcatgtatattcctcattactatcccaaggttcaactcataacaactcgtgcgacgaagatc 80175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 18712 - 18651
Alignment:
Q  201 aagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18712 aagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 18651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 10226 - 10333
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| |||||||| |||||||||| ||||| | |||||||||||||||||||||||||||||||    
T  10226 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttccttcta-agtctttccaggttcaatctcatcctacattct 10323  T
Q  248 ttcctaatca 257  Q
    ||||||||||    
T  10324 ttcctaatca 10333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 214 - 332
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagat-tcccaaagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||||||| |||||||| ||||  | ||  |||| |||||||||||||  ||  |||||||||||||| ||||||||||||||||||||||||||||    
T  214 ggtcactcgcgtggcgagagcctctactcgctgtggcgagttcaggtcagaactcaaaaagtttcattcta-aatctttccaggttcaatctcatcctac 312  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  313 attctttcctaatcattatt 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 12611 - 12502
Alignment:
Q  152 gcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttc 250  Q
    |||||||||||| ||||| | |||||||| ||||||| |||||||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  12611 gcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattctatg-tctttccaggttcaatctcatcctacattctttc 12514  T
Q  251 ctaatcattatt 262  Q
    ||||||| ||||    
T  12513 ctaatcaatatt 12502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 12748 - 12675
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 89  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| ||||||  ||||||||||||    
T  12748 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcctaaggttcaactc 12675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 9774 - 9527
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 115  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||||    
T  9774 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcac 9675  T
Q  116 aaa-atcctaaacaagtaatctttaaatag--gtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattc 211  Q
    |   | ||||||||||  ||  |  ||||   ||  ||||||||||||||| ||||| | |||||| | ||||||| |||||||| ||||||||||||||    
T  9674 atttaacctaaacaaggcattctgtaatactagtg-ctcgcgaggcgagagcctctgctcgccatgacgagttcag-tcagattctccaaagtttcattc 9577  T
Q  212 tacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    || | ||||||||| |||||||||||||||||||||||| |||||| ||||    
T  9576 ta-agtctttccagattcaatctcatcctacattctttcgtaatcaatatt 9527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 344 - 456
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| |||||||| |||||||| ||||||| | | |||||||||||||||||||||||||||||    
T  344 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctccaaagttccattcta-agtatttccaggttcaatctcatcctacattct 441  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  442 ttcctaatcaatatt 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 23125 - 23310
Alignment:
Q  77 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactctgtttgcc 175  Q
    |||||||||||||||||  |||||||| |||||| || ||||| ||||| ||||  | ||| |   |||||||||||||||||||| | ||||| | ||     
T  23125 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagacactctgtttctaggtcactcgcgaggcgagggcctctgctcgct 23223  T
Q  176 atggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
     |||| || |||| ||||| | ||||| ||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  23224 gtggcgagctcagttcagaattccaaaattcaattctacaatctttccagatccaatctcatcctacattctttcctaatcattatt 23310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 8099 - 7987
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||| | | |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  8099 ctcgcgaggcgagagcctctgctcgccatggcgagttctgtt-agattctccaaagtttcattcta-agtctttccaggttcaatctcatcctacattct 8002  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  8001 ttcctaatcaatatt 7987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 262
Target Start/End: Original strand, 16320 - 16515
Alignment:
Q  67 ataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagac 165  Q
    ||||||| |||||||||||||||||||  |||||||| |||||| || ||||| ||||| ||||    ||| |   | ||||||| |||||| ||| | |    
T  16320 ataactacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagactctctgtttctgggtcacttgcgaggtgagggcc 16418  T
Q  166 tctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| | ||| |||| || |||| ||||| | ||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16419 tctgatcgccgtggcgagctcagttcagaattccaaaattcaattctacaatctttccaggttcaatctcgtcctacattctttcctaatcattatt 16515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 32709 - 32652
Alignment:
Q  205 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||| ||||||| ||||||||||||||| || || || |||||||||||||||    
T  32709 ttcattctaaaatctttacaggttcaatctcattctccagtccttcctaatcattatt 32652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 46296 - 46353
Alignment:
Q  205 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||| ||||||| ||||||||||||||| || || || |||||||||||||||    
T  46296 ttcattctaaaatctttacaggttcaatctcattctccagtccttcctaatcattatt 46353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 5933 - 5814
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||  ||||||||||| ||||| | ||| |||| ||||||||||||| ||||  || |||||||| | |||||| |||||||||||||||||||||    
T  5933 ggtcactaacgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccgcaaatttcattcaataatcttcccaggttcaatctcatcctac 5834  T
Q  243 attctttcctaatcattatt 262  Q
    | ||||||||||||||||||    
T  5833 aatctttcctaatcattatt 5814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 20426 - 20540
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagat-tcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | | | |||| || ||||||||||  ||| |||||||||||||| |||||||||||||||||||| || ||||||||    
T  20426 actcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactccaaaagtttcattcta-aatctttccaggttcaatcttattctacattc 20524  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  20525 tttcctaatcattatt 20540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 132967 - 133081
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | |||||||| ||||||||| ||| ||| |||| |||||||||| | ||||||||||||||||||||| || || ||    
T  132967 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatc 133065  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  133066 tttcctaatcattatt 133081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 440 - 558
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    |||||||||||||||||||| ||||| | |||||||| |||||||||   | || ||||  ||||||||| |||||||||| |||||||||||| || ||    
T  440 ggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttccaagttcaatctcattctcca 539  T
Q  244 ttctttcctaatcattatt 262  Q
     ||||||||||||||||||    
T  540 atctttcctaatcattatt 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 29081 - 28973
Alignment:
Q  153 cgaggcgagagactctgtttgccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattctttcc 251  Q
    ||||||||||| ||||| | |||||||||||||| |||||||||| | ||| |||||||||| | |||||| |||||||||||||| |||||||||||||    
T  29081 cgaggcgagagcctctgctcgccatggctagttc-ggtcagattctctaaattttcattcta-agtctttctaggttcaatctcattctacattctttcc 28984  T
Q  252 taatcattatt 262  Q
    |||||||||||    
T  28983 taatcattatt 28973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 2250 - 2138
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||||||||| | ||| |||||||||| | ||||| ||||||||||||||| |||||||||    
T  2250 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattcta-agtcttttcaggttcaatctcattctacattct 2153  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  2152 ttcctaatcattatt 2138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 24456 - 24344
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||||| |||||||  |||||||||||||||| | |||||| |||||||||||||||||| |||||    
T  24456 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattatccaaagtttcattcta-agtctttctaggttcaatctcatcctaaattct 24359  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||| ||||    
T  24358 ttcctaatcaatatt 24344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 32397 - 32511
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||| ||||| ||||| | |||||||| ||||||||| ||| ||| |||| |||||||||| | ||||||||||||||||||||| || || ||    
T  32397 actcgcgaggtgagagcctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatc 32495  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  32496 tttcctaatcattatt 32511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 17965 - 17888
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 93  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||| ||||    
T  17965 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactttcaa 17888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 2112 - 2039
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 89  Q
    ||||||||||| |||||||||| |||||| ||||||||||| |||||||| |||||||||  |||| |||||||    
T  2112 atcatcataaatcagcttcacagatcatcgttaatattataaataatattgataactatcctaaggatcaactc 2039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 6557 - 6521
Alignment:
Q  226 gttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6557 gttcaatctcattctacattctttcctaatcattatt 6521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 2826 - 2778
Alignment:
Q  214 caatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2826 caatctttccaggttcaatctcatcctacattctttcctaatcattatt 2778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 2108 - 1994
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcagg-tcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| |||||||||| |||||||| |||| ||| |||| |||||||||| | |||||  | |||||||||||| || || ||    
T  2108 actcgcgaggcgagagcctctgcttgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtctttttatgttcaatctcattctccaatc 2010  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  2009 tttcctaatcattatt 1994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 3790 - 3896
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||||||||| |||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||           ||||||||||||||||||||    
T  3790 ggtcactcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctac 3878  T
Q  243 attctttcctaatcatta 260  Q
    ||||||||||||||||||    
T  3879 attctttcctaatcatta 3896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 7854 - 7960
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||||||||| |||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||           ||||||||||||||||||||    
T  7854 ggtcactcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctac 7942  T
Q  243 attctttcctaatcatta 260  Q
    ||||||||||||||||||    
T  7943 attctttcctaatcatta 7960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 7126 - 7239
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||| ||||||||| ||||  | |||||||| ||||||||| ||| ||| ||||  ||||||||| ||||||||||||||||||||||| || || |||    
T  7126 ctcgcaaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaaatctttccaggttcaatctcattctccaatct 7224  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  7225 ttcctaatcattatt 7239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 15974 - 16086
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccc-aaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||||||||| | ||| ||||||| |  | ||||| ||||||||||||||| |||||||||    
T  15974 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattttg-agtcttttcaggttcaatctcattctacattct 16071  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  16072 ttcctaatcattatt 16086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 39786 - 39864
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttc 222  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| |||||  ||||||||||||||||||    
T  39786 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttc 39864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 75026 - 74948
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttc 222  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| |||||  ||||||||||||||||||    
T  75026 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttc 74948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 1223 - 1331
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||||| |||||||||| ||||| | |||||||| ||||| ||||||| ||||| |||||||||||           ||||||||||||||||||||    
T  1223 ggtcactcgtgaggcgagagcctctgctcgccatggcgagttctggtcagaatcccacaagtttcattc-----------caggttcaatctcatcctac 1311  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  1312 attctttcctaatcattatt 1331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 2609 - 2496
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||  | |||||||| ||||||||| ||| ||| |||| |||||||||| ||||||| ||||||||| ||||| || || ||    
T  2609 actcgcgaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaa-tttcattctaaaatctttacaggttcaaactcattctccaatc 2512  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  2511 tttcctaatcattatt 2496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 28616 - 28502
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattc 246  Q
    |||||||||||||||| ||||| | |||||||| ||||||||| ||| ||| |||| |||||||||| | ||||   |||||||||||||| || || ||    
T  28616 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtcttcgtaggttcaatctcattctccaatc 28518  T
Q  247 tttcctaatcattatt 262  Q
    ||||||||||||||||    
T  28517 tttcctaatcattatt 28502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 13518 - 13628
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcct 240  Q
    |||||||||||||||||||||| ||||| | ||| |||| ||||||||||||| | ||| |||||||||||           |||||||| |||||||||    
T  13518 taggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatgccacaagtttcattc-----------caggttcagtctcatcct 13606  T
Q  241 acattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||    
T  13607 acattctttcctaatcattatt 13628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 164574 - 164515
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatc 75  Q
    ||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  164574 atcatcataaatcagcttcacagatcatcgttaatattataaataatattcataactatc 164515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 161073 - 161014
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatc 75  Q
    ||||||||||| |||||||||| |||||| ||||||||||| |||||||| |||||||||    
T  161073 atcatcataaatcagcttcacagatcatcgttaatattataaataatattgataactatc 161014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 4877 - 4835
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4877 ttccaggttcaatctcatcctacattctttcctaatcattatt 4835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 798 - 756
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  798 ttccaggttcaatctcatcctacattctttcctaatcattatt 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 9391 - 9504
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggt-cagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||  | |||||||| ||||||||| ||| ||| ||||  ||||||||| | ||||||||||| ||||||||  |||||||||    
T  9391 ctcgcgaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaactctttccaggtccaatctcactctacattct 9489  T
Q  248 ttcctaatcattatt 262  Q
    ||||||||| |||||    
T  9490 ttcctaatcgttatt 9504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 10172 - 10130
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10172 ttccaggttcaatctcatcctacattctttcctaatcattatt 10130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 10238 - 10182
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 200  Q
    |||||||||||||||||||| ||||| |  || |||| ||||||||||||| |||||    
T  10238 ggtcactcgcgaggcgagagcctctgctccccgtggcgagttcaggtcagaatccca 10182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 5223 - 5265
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5223 ttccaggttcaatctcatcctacattctttcctaatcattatt 5265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 11259 - 11217
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11259 ttccaggttcaatctcatcctacattctttcctaatcattatt 11217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 15211 - 15169
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15211 ttccaggttcaatctcatcctacattctttcctaatcattatt 15169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 19576 - 19694
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctaca 243  Q
    ||||| |||||||||||||| ||||| | |||||||| |||||||||   |  |  |||  ||||||||| ||||||||||||||||||||||| || ||    
T  19576 ggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaacacataaaaattcattctaaaatctttccaggttcaatctcattctcca 19675  T
Q  244 ttctttcctaatcattatt 262  Q
     || |||||||||||||||    
T  19676 atccttcctaatcattatt 19694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 101709 - 101822
Alignment:
Q  148 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    |||| |||||| |||| ||||| | |||||||| |||||||||||  ||| |||| || ||||||| | ||| ||||||||||||||||| || || |||    
T  101709 actcccgaggcaagagcctctgctcgccatggcgagttcaggtcaagttcacaaaatt-cattctaaagtctctccaggttcaatctcattctccaatct 101807  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  101808 ttcctaatcattatt 101822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 861 - 753
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||| ||||           |||||||||||||||||     
T  861 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatcta-----------ggttcaatctcatcctaa 773  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  772 attctttcctaatcattatt 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 245 - 353
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||| |||||||||||| ||||| | |||||||| ||||||||||||| ||||| |||||| ||||           ||| ||||||||||||||||    
T  245 ggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttaattc-----------cagattcaatctcatcctac 333  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  334 attctttcctaatcattatt 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 5021 - 5129
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttccaggttcaatctcatcctac 242  Q
    ||||||| |||||||||||| ||||| | |||||||| ||||||||||||| ||||| |||||| ||||           ||| ||||||||||||||||    
T  5021 ggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttaattc-----------cagattcaatctcatcctac 5109  T
Q  243 attctttcctaatcattatt 262  Q
    ||||||||||||||||||||    
T  5110 attctttcctaatcattatt 5129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 85563 - 85490
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 89  Q
    ||||||||||| |||||||||| |||||| ||||||||| | ||||||||||||||||||  |||| |||||||    
T  85563 atcatcataaatcagcttcacagatcatcgttaatattaaaaataatattcataactatcctaaggatcaactc 85490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 161056 - 161113
Alignment:
Q  205 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||| | ||| ||||||||||||||||| || || ||||||||||||||||||    
T  161056 ttcattctaaagtctctccaggttcaatctcattctccaatctttcctaatcattatt 161113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 13324 - 13426
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    |||||||||| ||||||||| |||| ||||| ||| | ||| |||| | ||||||| |||||  ||  |||||||| ||||||||| |||||||||||||    
T  13324 cagcttcacagatcatcattgatatcatatacaatttccattactaccccaaggtttaactcataacaactcgtgcgacaaagatcgcaaaatcctaaac 13423  T
Q  128 aag 130  Q
    |||    
T  13424 aag 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 16026 - 15924
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    |||||||||| ||||||||| |||| ||||| ||| | ||| |||| |  ||||||||||||  ||  ||| |||| ||||||||| |||||||||||||    
T  16026 cagcttcacagatcatcattgatatcatatacaatttccattactacccaaaggttcaactcataacaacttgtgcgacaaagatcgcaaaatcctaaac 15927  T
Q  128 aag 130  Q
    |||    
T  15926 aag 15924  T

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Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 47361 - 47403
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  47361 ttccaggttcaatctcatcctacattcattcctaatcattatt 47403  T

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Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 51954 - 51996
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  51954 ttccaggttcaatctcgtcctacattctttcctaatcattatt 51996  T

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Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 60641 - 60479
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 127  Q
    |||||||||| || ||||||||||| ||||| ||| | |||  ||| | |||||||||||||  ||   ||||||| ||||||||||||||| |||||||    
T  60641 cagcttcacagattatcattaatatcatatacaatctccattcctaccccaaggttcaactcataacatctcgtgcgacaaagatcacaaaaccctaaac 60542  T
Q  128 aa-gtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcagg 189  Q
    || ||| ||| ||| | ||  |||||||||||||||| ||||  | || ||||| ||||||||    
T  60541 aatgtattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

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Target: scaffold0761 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 4475 - 4531
Alignment:
Q  16 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataact 72  Q
    ||||||| ||| |||||||||| ||||||| || |||||||||||||||||||||||    
T  4475 atcatcagaaatcagcttcacagatcatcaatagtattatatataatattcataact 4531  T

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Target: scaffold0130 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 28140 - 28223
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag-attcccaaagtttcattctacaatctttccaggt 227  Q
    |||||||||||||||||||| || || | ||| |||| |||||||||||| ||||  |||||||||||||| |||||||||||||    
T  28140 ggtcactcgcgaggcgagagcctttgctcgccgtggcgagttcaggtcagaattcaaaaagtttcattcta-aatctttccaggt 28223  T

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Target: scaffold0130; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 28924 - 28964
Alignment:
Q  222 ccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  28924 ccaggttcaatctcattctacattctttcctaatcattatt 28964  T

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Target: scaffold0395 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 776 - 655
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca--aagtttcattctacaatctttccaggttcaatctcatcc 239  Q
    |||||||||| ||||||| ||  ||||| | |||||||| ||||||||||||||| |||  |||||||||||| | |     |||||||||||||| | |    
T  776 taggtcactcacgaggcgggaacctctgctcgccatggcgagttcaggtcagatttccaacaagtttcattct-ctactaaaccaggttcaatctcgttc 678  T
Q  240 tacattctttcctaatcattatt 262  Q
    |||| ||||||||||||||||||    
T  677 tacaatctttcctaatcattatt 655  T

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Target: scaffold0389 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 13340 - 13301
Alignment:
Q  223 caggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  13340 caggctcaatctcatcctacattctttcctaatcattatt 13301  T

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Target: scaffold0351 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 16657 - 16696
Alignment:
Q  223 caggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  16657 caggttcaatctcgtcctacattctttcctaatcattatt 16696  T

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Target: scaffold0490 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 2327 - 2369
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  2327 ttccaggttcaatctcatcctacattccttcctaattattatt 2369  T

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Target: scaffold0490; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 2259 - 2310
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag 193  Q
    |||||||||||||||||||||| ||||| | ||| |||| ||||||||||||    
T  2259 taggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 2310  T

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Target: scaffold0427 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 13870 - 13912
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  13870 ttccaggttcaatctcatgctacatcctttcctaatcattatt 13912  T

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Target: scaffold0309 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 6985 - 7027
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  6985 ttccaggttcaatctcatcctacattccttcctaataattatt 7027  T

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Target: scaffold0309; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 6919 - 6968
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag 193  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||    
T  6919 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 6968  T

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Target: scaffold0125 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 45596 - 45482
Alignment:
Q  149 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagt-ttcattctacaatctttccaggttcaatctcatcctacattct 247  Q
    ||||||||||||||| ||||  | |||||||| |||||||||   |||| ||||   ||||||||| | |||| |||||||||||||||| |  || |||    
T  45596 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtacaattcacaaaaaattcattctaaagtcttaccaggttcaatctcattccccaatct 45497  T
Q  248 ttcctaatcattatt 262  Q
    |||||||||||||||    
T  45496 ttcctaatcattatt 45482  T

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Target: scaffold0113 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 32439 - 32481
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||| ||||||||||||| ||||||||    
T  32439 ttccaggttcaatctcatcccacattctttcctagtcattatt 32481  T

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Target: scaffold0113; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 32373 - 32429
Alignment:
Q  144 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 200  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||| |||||| |||||    
T  32373 ggtcactcgcgaggcgagagcctctgctcgccgtggcaagttcaagtcagaatccca 32429  T

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Target: scaffold0088 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 21276 - 21318
Alignment:
Q  220 ttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  21276 ttccaggtacaatctcatcctacattctttcataatcattatt 21318  T

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Target: scaffold0084 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 10471 - 10568
Alignment:
Q  142 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagttt--cattctacaatctttccaggttcaatctcat 237  Q
    |||||||||||||||||| ||  ||||| | ||| |||| ||||||||||||| |   ||| |||  ||||||| |||||||||||||||||||||||    
T  10471 taggtcactcgcgaggcgggaagctctgctcgccgtggcgagttcaggtcagaatttgaaaatttttcattctaaaatctttccaggttcaatctcat 10568  T

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Target: scaffold0151 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 10540 - 10572
Alignment:
Q  230 aatctcatcctacattctttcctaatcattatt 262  Q
    |||||||||||||||||||||||||||||||||    
T  10540 aatctcatcctacattctttcctaatcattatt 10572  T

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Target: scaffold0070 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 260
Target Start/End: Original strand, 4841 - 4949
Alignment:
Q  152 gcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcc 251  Q
    |||||||||||| || || | |||||||| ||  |||||| |||   ||||  ||||||||| ||||||| ||||||||||||||| ||||| |||| ||    
T  4841 gcgaggcgagagcctttgctcgccatggcgaggacaggtctgatcgacaaaagttcattctaaaatcttttcaggttcaatctcattctacaatcttccc 4940  T
Q  252 taatcatta 260  Q
    || ||||||    
T  4941 tagtcatta 4949  T

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Target: scaffold0461 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 11659 - 11692
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataa 61  Q
    |||||||||| |||||||||||||||||||||||    
T  11659 cagcttcacagatcatcattaatattatatataa 11692  T

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Target: scaffold0555 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 917 - 1007
Alignment:
Q  173 gccatggctagttcaggtcagattcccaaa--gtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattatt 262  Q
    |||||||| |||||||| |||| ||||||   ||||||||||| | ||||||||||| | |||||||| |||||||  ||||||||| ||||    
T  917 gccatggcgagttcagggcagaatcccaagttgtttcattcta-agtctttccaggtcctatctcatcttacattcactcctaatcaatatt 1007  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 25300 - 25388
Alignment:
Q  28 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcaca 116  Q
    |||||||||| |||||||||||||||||||  ||  |||||  ||| | ||||| ||||||| |||  |||||||| |||||| |||||    
T  25300 cagcttcacagatcatcattaatattatattcaaccttcatttctaccccaaggatcaactcacaacaactcgtgcgacaaaggtcaca 25388  T

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