View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0649_high_11 (Length: 222)

Name: NF0649_high_11
Description: NF0649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0649_high_11
NF0649_high_11
[»] chr2 (19 HSPs)
chr2 (1-222)||(24174877-24175099)
chr2 (1-222)||(24655156-24655378)
chr2 (1-215)||(24869964-24870179)
chr2 (1-215)||(25961352-25961567)
chr2 (2-207)||(40428555-40428762)
chr2 (14-215)||(24716361-24716562)
chr2 (44-205)||(25963577-25963738)
chr2 (13-205)||(21318465-21318658)
chr2 (13-205)||(21327396-21327589)
chr2 (62-205)||(22811789-22811934)
chr2 (111-207)||(31344957-31345054)
chr2 (27-179)||(19688600-19688752)
chr2 (62-146)||(21918194-21918279)
chr2 (111-179)||(30345255-30345324)
chr2 (150-215)||(37524759-37524824)
chr2 (43-205)||(24735486-24735649)
chr2 (155-205)||(21916071-21916121)
chr2 (1-71)||(44370116-44370186)
chr2 (111-179)||(1283162-1283231)
[»] chr7 (26 HSPs)
chr7 (1-222)||(9445976-9446198)
chr7 (1-217)||(20569414-20569631)
chr7 (1-205)||(3271918-3272122)
chr7 (39-205)||(12321597-12321764)
chr7 (25-198)||(2760233-2760406)
chr7 (42-205)||(14429976-14430140)
chr7 (1-145)||(42205257-42205402)
chr7 (111-204)||(25927431-25927525)
chr7 (111-207)||(13918708-13918805)
chr7 (27-205)||(11312731-11312910)
chr7 (40-179)||(15580801-15580940)
chr7 (43-198)||(15605132-15605287)
chr7 (111-207)||(1859014-1859111)
chr7 (149-217)||(42204076-42204145)
chr7 (134-205)||(2832393-2832464)
chr7 (149-207)||(7519325-7519383)
chr7 (46-181)||(70628-70763)
chr7 (46-181)||(74737-74872)
chr7 (134-205)||(9751707-9751778)
chr7 (48-179)||(12318237-12318368)
chr7 (134-205)||(39267851-39267922)
chr7 (46-179)||(33217-33350)
chr7 (111-179)||(39722039-39722108)
chr7 (40-118)||(12187199-12187277)
chr7 (57-179)||(13635343-13635465)
chr7 (19-109)||(17137898-17137988)
[»] chr5 (27 HSPs)
chr5 (1-222)||(24221954-24222176)
chr5 (1-217)||(12028383-12028600)
chr5 (1-217)||(22757207-22757424)
chr5 (1-222)||(26680659-26680878)
chr5 (1-222)||(26952266-26952485)
chr5 (1-217)||(17918969-17919186)
chr5 (9-217)||(123131-123340)
chr5 (1-215)||(23451431-23451645)
chr5 (1-179)||(23458711-23458889)
chr5 (1-179)||(23462972-23463150)
chr5 (1-208)||(31342216-31342405)
chr5 (1-215)||(1858794-1859010)
chr5 (42-205)||(21366524-21366688)
chr5 (111-207)||(18356037-18356134)
chr5 (111-207)||(20911099-20911196)
chr5 (42-197)||(20805653-20805808)
chr5 (109-207)||(10753109-10753208)
chr5 (65-197)||(20767075-20767207)
chr5 (134-205)||(24767497-24767568)
chr5 (46-179)||(15236643-15236776)
chr5 (19-109)||(18769839-18769929)
chr5 (111-179)||(11220521-11220590)
chr5 (111-179)||(11228930-11228999)
chr5 (111-179)||(11230919-11230988)
chr5 (28-89)||(17410647-17410708)
chr5 (19-112)||(23572270-23572363)
chr5 (111-163)||(40723851-40723904)
[»] chr4 (20 HSPs)
chr4 (1-215)||(16351666-16351881)
chr4 (1-217)||(25555587-25555804)
chr4 (1-217)||(11250379-11250596)
chr4 (1-222)||(15353124-15353347)
chr4 (4-205)||(5338801-5339003)
chr4 (44-205)||(16356813-16356974)
chr4 (44-205)||(16348525-16348686)
chr4 (44-205)||(16487938-16488100)
chr4 (111-207)||(43256341-43256438)
chr4 (134-205)||(20157411-20157482)
chr4 (134-205)||(13812970-13813041)
chr4 (27-179)||(17810382-17810534)
chr4 (65-167)||(12570156-12570259)
chr4 (149-207)||(15224960-15225018)
chr4 (111-179)||(10712629-10712698)
chr4 (111-179)||(10926399-10926468)
chr4 (27-179)||(36133806-36133958)
chr4 (43-202)||(43256021-43256179)
chr4 (111-179)||(12487484-12487553)
chr4 (134-179)||(22634373-22634418)
[»] chr3 (37 HSPs)
chr3 (1-222)||(11557202-11557424)
chr3 (1-217)||(11594957-11595174)
chr3 (9-217)||(3389761-3389971)
chr3 (1-217)||(42326023-42326232)
chr3 (11-217)||(3402783-3402991)
chr3 (27-215)||(1982654-1982843)
chr3 (44-205)||(12496352-12496513)
chr3 (42-205)||(11862887-11863051)
chr3 (42-205)||(18383775-18383939)
chr3 (44-205)||(11298389-11298550)
chr3 (42-205)||(322685-322849)
chr3 (78-205)||(11851675-11851803)
chr3 (111-207)||(4589037-4589134)
chr3 (111-207)||(5223144-5223241)
chr3 (111-207)||(12339546-12339643)
chr3 (42-205)||(19725770-19725934)
chr3 (1-93)||(26190826-26190918)
chr3 (111-207)||(11300694-11300791)
chr3 (121-217)||(12037890-12037987)
chr3 (111-207)||(15464945-15465042)
chr3 (111-207)||(19775513-19775610)
chr3 (27-205)||(20461344-20461523)
chr3 (39-166)||(15060427-15060555)
chr3 (134-205)||(14665495-14665566)
chr3 (1-179)||(326982-327160)
chr3 (27-179)||(2897667-2897819)
chr3 (149-205)||(14668651-14668707)
chr3 (39-146)||(15051671-15051779)
chr3 (19-146)||(16909905-16910033)
chr3 (111-179)||(37439900-37439969)
chr3 (19-166)||(16369543-16369691)
chr3 (27-179)||(30066059-30066211)
chr3 (47-205)||(7793213-7793372)
chr3 (19-109)||(856329-856419)
chr3 (27-93)||(11165373-11165439)
chr3 (99-167)||(12172938-12173007)
chr3 (43-179)||(15482773-15482908)
[»] chr6 (25 HSPs)
chr6 (1-217)||(27567427-27567644)
chr6 (1-217)||(19790597-19790814)
chr6 (1-222)||(20907799-20908021)
chr6 (1-199)||(27553425-27553606)
chr6 (1-215)||(18180577-18180791)
chr6 (1-215)||(22408123-22408336)
chr6 (39-205)||(18907205-18907372)
chr6 (1-181)||(23657238-23657418)
chr6 (111-207)||(1644453-1644550)
chr6 (78-205)||(21834784-21834910)
chr6 (111-207)||(23414725-23414822)
chr6 (111-207)||(27556483-27556580)
chr6 (111-207)||(31478074-31478171)
chr6 (27-205)||(17804280-17804459)
chr6 (111-207)||(27416122-27416219)
chr6 (40-172)||(22429887-22430019)
chr6 (99-167)||(15894344-15894413)
chr6 (27-179)||(14472380-14472532)
chr6 (117-179)||(14472044-14472107)
chr6 (134-205)||(16523336-16523407)
chr6 (117-179)||(18956033-18956096)
chr6 (155-205)||(21766789-21766839)
chr6 (1-71)||(22059560-22059630)
chr6 (27-93)||(27415786-27415852)
chr6 (111-179)||(16760068-16760137)
[»] scaffold0637 (1 HSPs)
scaffold0637 (1-217)||(8642-8859)
[»] chr1 (21 HSPs)
chr1 (1-217)||(45489561-45489778)
chr1 (9-217)||(3704890-3705099)
chr1 (1-198)||(45310184-45310382)
chr1 (9-198)||(18393789-18393979)
chr1 (1-215)||(17678405-17678619)
chr1 (1-205)||(8761450-8761655)
chr1 (1-86)||(33049905-33049989)
chr1 (19-198)||(22449101-22449281)
chr1 (141-222)||(33049984-33050065)
chr1 (111-207)||(20229073-20229170)
chr1 (40-198)||(24782957-24783115)
chr1 (111-207)||(33797362-33797459)
chr1 (62-197)||(3472804-3472939)
chr1 (19-172)||(21022768-21022922)
chr1 (39-167)||(6151990-6152119)
chr1 (27-198)||(16080288-16080459)
chr1 (28-198)||(36819153-36819323)
chr1 (111-179)||(1925393-1925462)
chr1 (111-179)||(20924407-20924476)
chr1 (102-205)||(18182039-18182143)
chr1 (44-171)||(42865071-42865200)
[»] scaffold0001 (1 HSPs)
scaffold0001 (9-222)||(422357-422571)
[»] scaffold0550 (1 HSPs)
scaffold0550 (26-222)||(7548-7745)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-217)||(413868-414085)
scaffold0003 (111-207)||(71142-71239)
scaffold0003 (27-93)||(71509-71575)
[»] scaffold0410 (2 HSPs)
scaffold0410 (2-217)||(11460-11667)
scaffold0410 (143-217)||(2250-2325)
[»] chr8 (17 HSPs)
chr8 (1-215)||(20856242-20856458)
chr8 (1-217)||(16861144-16861360)
chr8 (1-215)||(22010496-22010707)
chr8 (42-205)||(17926565-17926728)
chr8 (42-205)||(30643149-30643314)
chr8 (44-203)||(15602877-15603037)
chr8 (19-205)||(20465874-20466061)
chr8 (1-207)||(39094759-39094949)
chr8 (44-205)||(15611329-15611491)
chr8 (42-205)||(16410113-16410276)
chr8 (1-166)||(377414-377580)
chr8 (111-207)||(14398037-14398134)
chr8 (45-166)||(19259443-19259565)
chr8 (65-167)||(24755856-24755959)
chr8 (111-179)||(21410723-21410792)
chr8 (111-179)||(21805215-21805284)
chr8 (111-179)||(21828278-21828347)
[»] scaffold0015 (1 HSPs)
scaffold0015 (9-207)||(192142-192342)
[»] scaffold0439 (2 HSPs)
scaffold0439 (9-222)||(2261-2476)
scaffold0439 (9-222)||(10121-10336)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-217)||(35328-35546)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-205)||(19109-19314)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-215)||(30562-30776)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-198)||(4042-4240)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-217)||(7088-7305)
[»] scaffold1220 (1 HSPs)
scaffold1220 (1-215)||(1876-2090)
[»] scaffold0483 (1 HSPs)
scaffold0483 (1-127)||(493-619)
[»] scaffold1326 (1 HSPs)
scaffold1326 (27-215)||(1333-1522)
[»] scaffold0346 (1 HSPs)
scaffold0346 (1-205)||(15180-15385)
[»] scaffold0109 (2 HSPs)
scaffold0109 (1-127)||(45280-45406)
scaffold0109 (117-179)||(36210-36273)
[»] scaffold0425 (1 HSPs)
scaffold0425 (42-198)||(261-418)
[»] scaffold0367 (1 HSPs)
scaffold0367 (42-205)||(991-1154)
[»] scaffold0104 (2 HSPs)
scaffold0104 (78-205)||(1924-2051)
scaffold0104 (78-205)||(9606-9733)
[»] scaffold0037 (2 HSPs)
scaffold0037 (42-205)||(21427-21591)
scaffold0037 (111-207)||(80618-80715)
[»] scaffold0393 (1 HSPs)
scaffold0393 (42-205)||(1587-1751)
[»] scaffold0412 (1 HSPs)
scaffold0412 (44-205)||(6276-6437)
[»] scaffold0079 (1 HSPs)
scaffold0079 (44-205)||(44175-44336)
[»] scaffold0035 (1 HSPs)
scaffold0035 (42-205)||(46585-46749)
[»] scaffold0017 (2 HSPs)
scaffold0017 (31-198)||(15057-15225)
scaffold0017 (31-198)||(19579-19747)
[»] scaffold0676 (1 HSPs)
scaffold0676 (19-205)||(4524-4711)
[»] scaffold0124 (1 HSPs)
scaffold0124 (62-192)||(42729-42860)
[»] scaffold0051 (1 HSPs)
scaffold0051 (111-207)||(30964-31061)
[»] scaffold0080 (1 HSPs)
scaffold0080 (42-205)||(18514-18678)
[»] scaffold1296 (1 HSPs)
scaffold1296 (44-205)||(487-649)
[»] scaffold0299 (1 HSPs)
scaffold0299 (111-207)||(6760-6857)
[»] scaffold0293 (1 HSPs)
scaffold0293 (111-207)||(20393-20490)
[»] scaffold0029 (2 HSPs)
scaffold0029 (27-207)||(80794-80974)
scaffold0029 (111-207)||(80460-80557)
[»] scaffold0036 (1 HSPs)
scaffold0036 (27-205)||(66259-66438)
[»] scaffold0031 (2 HSPs)
scaffold0031 (27-205)||(53648-53827)
scaffold0031 (111-179)||(36350-36419)
[»] scaffold0615 (1 HSPs)
scaffold0615 (39-205)||(1939-2107)
[»] scaffold0476 (2 HSPs)
scaffold0476 (27-198)||(5687-5858)
scaffold0476 (27-198)||(6882-7053)
[»] scaffold0327 (1 HSPs)
scaffold0327 (27-127)||(452-552)
[»] scaffold0761 (1 HSPs)
scaffold0761 (99-205)||(6224-6331)
[»] scaffold0166 (1 HSPs)
scaffold0166 (134-205)||(9994-10065)
[»] scaffold0042 (1 HSPs)
scaffold0042 (65-167)||(34791-34894)
[»] scaffold0216 (2 HSPs)
scaffold0216 (13-71)||(16950-17008)
scaffold0216 (134-205)||(17062-17134)
[»] scaffold0016 (1 HSPs)
scaffold0016 (111-179)||(207766-207835)
[»] scaffold0311 (1 HSPs)
scaffold0311 (39-166)||(6933-7061)
[»] scaffold1052 (1 HSPs)
scaffold1052 (134-205)||(2999-3070)
[»] scaffold0210 (2 HSPs)
scaffold0210 (19-115)||(21641-21737)
scaffold0210 (19-115)||(29533-29629)
[»] scaffold0405 (1 HSPs)
scaffold0405 (27-89)||(9509-9571)
[»] scaffold0349 (1 HSPs)
scaffold0349 (27-93)||(12618-12684)
[»] scaffold0185 (1 HSPs)
scaffold0185 (155-205)||(33642-33692)
[»] scaffold0056 (1 HSPs)
scaffold0056 (78-167)||(13971-14061)
[»] scaffold1124 (1 HSPs)
scaffold1124 (40-109)||(2070-2139)
[»] scaffold0158 (2 HSPs)
scaffold0158 (99-167)||(2974-3043)
scaffold0158 (99-167)||(6640-6709)
[»] scaffold0157 (1 HSPs)
scaffold0157 (111-179)||(32924-32993)
[»] scaffold0141 (1 HSPs)
scaffold0141 (111-179)||(14351-14420)
[»] scaffold0022 (1 HSPs)
scaffold0022 (140-205)||(73725-73790)
[»] scaffold0012 (1 HSPs)
scaffold0012 (111-179)||(189641-189710)


Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24175099 - 24174877
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24175099 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaagatgttagccggaa 24175000  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24174999 tctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 24174900  T
Q  200 gaattgttgctatgaaatgatga 222  Q
    ||||||||| |||||||| ||||    
T  24174899 gaattgttgttatgaaattatga 24174877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 24655156 - 24655378
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24655156 gaactgaatgcttttgataaagtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaagatgttagccggaa 24655255  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24655256 tctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 24655355  T
Q  200 gaattgttgctatgaaatgatga 222  Q
    ||||||||| |||||||| ||||    
T  24655356 gaattgttgttatgaaattatga 24655378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 24870179 - 24869964
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  24870179 gaactgaatgcttttgataaggtcgtgacctgagttgaatgaattgagtaggaatgaaacattaggtagtaatgaaacctatttaagatgttagccggaa 24870080  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  24870079 tctgtgaggttgttaagaactgctaagttgtttgtaatgtgatttaacgattaaatacattactcgaattattcttgaataaactagatgttgttgaaat 24869980  T
Q  200 gaattgttgctatgaa 215  Q
    ||||||||| ||||||    
T  24869979 gaattgttgttatgaa 24869964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 25961352 - 25961567
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||    
T  25961352 gaactgaatgcttttgataaaatcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaagatgttagctgcaa 25961451  T
Q  101 tctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaat 199  Q
    | |||||| |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  25961452 tatgtgaatttgttatgaactgttaagttgttgtaatgtgatttaatgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaaat 25961551  T
Q  200 gaattgttgctatgaa 215  Q
    ||||||||| ||||||    
T  25961552 gaattgttgttatgaa 25961567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 40428762 - 40428555
Alignment:
Q  2 aactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaat 101  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| |  ||||||||||   |||||||||||||||| | |  ||    
T  40428762 aactgagtgcttttgagaatgtcgtgacctgagttgaatgaattgagtaggaatggaacttagggtagtaatgtgacctatttaagatgttaactgagat 40428663  T
Q  102 ctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaat 199  Q
    |||||||| ||||| ||| ||||||| || ||||||||||||||||  |||||||||||||||||| |||||||| ||||| || |||||||||| ||||    
T  40428662 ctgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttaaataaccttgatgttgttgaaaat 40428563  T
Q  200 gaattgtt 207  Q
    ||||||||    
T  40428562 gaattgtt 40428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 24716361 - 24716562
Alignment:
Q  14 ttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgt 113  Q
    |||| ||||| | |||||||||||  ||||||||||||||||||||| |||||||||| |||  |||||||||||||||| | | || |||||| | |||    
T  24716361 ttgagaatgttgagacctgagttgcttgaattgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaacctgtgaggctgt 24716460  T
Q  114 taagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgttgctat 212  Q
    |  |||||| ||||||| ||||||||||||||||| ||||||||||||||| ||  |||| |||||| |    ||||||||||||||||||||||| |||    
T  24716461 t-tgaactgctaagttgtttgtaatgtgatttaacgattaaatgcattactagacatattattgaatgattatgatgttgttgaaatgaattgttgttat 24716559  T
Q  213 gaa 215  Q
    |||    
T  24716560 gaa 24716562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 25963577 - 25963738
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgat 142  Q
    |||||||||  |||| | |||||||||||||   ||||||||||||||||   | ||||||||||| ||||  |||||| ||||||||| ||||||||||    
T  25963577 ttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaattgaaatctgtgaagctgttt-gaactgctaagttgtttgtaatgtgat 25963675  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  25963676 ttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 25963738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 21318465 - 21318658
Alignment:
Q  13 tttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttg 112  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||||| ||| |||||| |||  | ||||||||||||||   | | | ||||||| ||    
T  21318465 tttgagaatgtcgtgacctgagttgattgaattgactaggaatggaactttaagtagtagtgagacatatttaagatgttaagtgaattatgtgaagctg 21318564  T
Q  113 ttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
     || ||||| ||||| || || | ||||||||||   ||||| ||||||||||||  |||| |||||||| | ||||||||| |||||||||||    
T  21318565 ctatgaactattaagctgtttatgatgtgatttattgattaattgcattacttgagatattgttgaataatcaagatgttgtagaaatgaattg 21318658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 21327396 - 21327589
Alignment:
Q  13 tttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttg 112  Q
    ||||| |||||  ||||||||||||| |||||||| |||||||||||| ||| |||||| |||  | ||||||| ||||||   | | ||||||||| ||    
T  21327396 tttgagaatgttttgacctgagttgattgaattgactaggaatggaactttaagtagtagtgagacatatttaaaatgttaagtgaattctgtgaagctg 21327495  T
Q  113 ttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||| ||||| ||||| || || | ||||||||||   ||||| ||||||||||||  |||| |||||||| | ||||||||| |||||||||||    
T  21327496 ttatgaactattaagctgtttatgatgtgatttattgattaattgcattacttgagatattgttgaataatcaagatgttgtagaaatgaattg 21327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 62 - 205
Target Start/End: Original strand, 22811789 - 22811934
Alignment:
Q  62 ttaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaat-gcat 159  Q
    |||||||||||||   ||||||||||||||||   | ||||||||||| || || ||||| |||||||| || |||||||||||||  ||||||| ||||    
T  22811789 ttaggtagtaatgtgacctatttaagatgttaagtgaaatctgtgaagctgctatgaactattaagttgattataatgtgatttaatgattaaattgcat 22811888  T
Q  160 tacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||| |||| |||| |||||| | | |||||||||||||||||||||    
T  22811889 tacctgaagtattattgaatgatcaagatgttgttgaaatgaattg 22811934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 31345054 - 31344957
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| |||||||||||| |  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  31345054 tgttatgaactgctaagttgtttgtaatgtgatttcatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 31344957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 19688600 - 19688752
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || ||||||||||||  |||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| || |||    
T  19688600 gacctgagttgcttggattgattaggaaatgaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 19688699  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| ||||||    
T  19688700 gtgattataatgtgatttattgattgattgcattacttgaattattattgaat 19688752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 21918194 - 21918279
Alignment:
Q  62 ttaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaa 146  Q
    |||||||||||||   |||||||||||||||| | | ||||||||||| || || ||||||||||| || || |||||||||||||    
T  21918194 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgctatgaactgttaagctgattataatgtgatttaa 21918279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 30345255 - 30345324
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  30345255 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 30345324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 37524824 - 37524759
Alignment:
Q  150 ttaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgttgctatgaa 215  Q
    |||| ||||||||||||| |||| |||||| | | ||||||| |||||||||||||||| ||||||    
T  37524824 ttaattgcattacttgaaatattattgaatgatcaagatgttattgaaatgaattgttgttatgaa 37524759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 24735649 - 24735486
Alignment:
Q  43 attgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgat 142  Q
    |||||||| ||| ||||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| || |||||  || |||||||||    
T  24735649 attgattaagaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagtgattataatgtgat 24735550  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaa-atgaattg 205  Q
    |||   ||| |  ||||||||||||||||| |||||| | | ||| ||||||||| ||||||||    
T  24735549 ttattgattgatcgcattacttgaattattattgaatgatcaagaagttgttgaagatgaattg 24735486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 21916071 - 21916121
Alignment:
Q  155 tgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  21916071 tgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 21916121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44370116 - 44370186
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagta 71  Q
    ||||||| |||  |||| ||||||||||| |||||||  ||||||||| ||||||| ||| ||||||||||    
T  44370116 gaactgagtgcaattgagaatgtcgtgacttgagttgcttgaattgatgaggaatgaaactttaggtagta 44370186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 1283231 - 1283162
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||| ||  ||||||||||||||| ||| |||| ||||||    
T  1283231 tgttatgaactgctaagttgtttgtaatgtgattaaatgattaaatgcattactcgaaatattattgaat 1283162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 9445976 - 9446198
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  9445976 gaactgaatgcttttgataatgttgtgacctgagttgaatgaattgattaggaatggaactttaggtagtaatgaaacatatttaagatgttagccggaa 9446075  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9446076 tctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 9446175  T
Q  200 gaattgttgctatgaaatgatga 222  Q
    ||||||||| |||||||| ||||    
T  9446176 gaattgttgttatgaaattatga 9446198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 20569414 - 20569631
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |  |    
T  20569414 gaactgaatgttttttataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaagatgttagctgata 20569512  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
      |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  20569513 catgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacttgatgttgttgaaaa 20569612  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  20569613 tgaattgttgttatgaaat 20569631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 3272122 - 3271918
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||  ||||| ||||||||||   | ||    
T  3272122 gaactgagtgcttttgagaatgttgtgacctgagttgattgaattgattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaa 3272023  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    | ||||||| ||||| ||||| ||||| || || | ||||||||||   ||||| ||||||||||||| |||| |||||||| | ||||||||| |||||    
T  3272022 tatgtgaagctgttatgaactattaagctgattatgatgtgatttactgattaattgcattacttgaa-tattattgaataatcaagatgttgtagaaat 3271924  T
Q  200 gaattg 205  Q
    ||||||    
T  3271923 gaattg 3271918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 205
Target Start/End: Original strand, 12321597 - 12321764
Alignment:
Q  39 atgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaat 137  Q
    |||||||||||||| |||||   |||||||||||||   ||||| |||||||||| | | ||||||||||  ||||| |||||||||||||| || ||||    
T  12321597 atgaattgattagggatggactcttaggtagtaatgtgacctatataagatgttaactgcaatctgtgaaactgttatgaactgttaagttgattataat 12321696  T
Q  138 gtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||||  ||||| ||||||||||||| |||| | |||| | | |||||||||||||||||||||    
T  12321697 gtgatttaatgattaattgcattacttgaaatattatggaatgatcaagatgttgttgaaatgaattg 12321764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 2760406 - 2760233
Alignment:
Q  25 gtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgtt 124  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||| | |  | |||||||||||||| | | ||||||||| | |||| | ||||| |    
T  2760406 gtgacctgagttgcttgaattgattaggaatggaactttaggtagtagtaagacatatttaagatgttaactgaaatctgtgaggctgttta-aactgct 2760308  T
Q  125 aagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    |||||| ||||||||||||||||  ||||||||||||||||||  |||| |||||| | |  |||||||||||||    
T  2760307 aagttgtttgtaatgtgatttaatgattaaatgcattacttgagatattattgaatgatcatgatgttgttgaaa 2760233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 14430140 - 14429976
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    |||||||||||  |||| | |||||||||||||   |||||||||||||||| | |  |||||||||| || || ||||||||||| || || |||||||    
T  14430140 aattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgctatgaactgttaagctgattataatgtg 14430041  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| ||||||||||||| |||| |||||| | | |||||||| ||||||||||||    
T  14430040 atttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 14429976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 42205402 - 42205257
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| | ||||||| ||||  ||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||| |||||||| | |  |    
T  42205402 gaactgagttcttttgagaatgatgtgacctgagttgaatgaattgagtaggaatggaactttaggtagtaatgtgacctatttgagatgttaactgaga 42205303  T
Q  101 tctgtgaagttgttaagaactgttaag-ttgttgtaatgtgattta 145  Q
     |||||||| ||||| ||| | ||||| |  |||||||||||||||    
T  42205302 cctgtgaagctgttatgaattattaagctatttgtaatgtgattta 42205257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 25927431 - 25927525
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaatt 204  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | ||||||||||||||||||||    
T  25927431 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaatt 25927525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 13918708 - 13918805
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||| ||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  13918708 tgttatgaactgctaagttgtttgtagtgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 13918805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 11312910 - 11312731
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || |||||||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| || |||    
T  11312910 gacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 11312811  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaa-atgaattg 205  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| |||||| | | ||| ||||||||| ||||||||    
T  11312810 gtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaagaagttgttgaagatgaattg 11312731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 15580940 - 15580801
Alignment:
Q  40 tgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgt 139  Q
    ||||||||||||||||||||| ||||||  || |||  |||||||| ||||||| | | || |||||||| | ||| ||| || |||||  || ||||||    
T  15580940 tgaattgattaggaatggaactttaggttatagtgagacctatttaggatgttaactgaaaactgtgaagctattatgaaatgctaagtgattataatgt 15580841  T
Q  140 gatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||||  |||| | |||||||||||||||||| ||||||    
T  15580840 gatttattaattgattgcattacttgaattattattgaat 15580801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 15605132 - 15605287
Alignment:
Q  43 attgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgat 142  Q
    |||||||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| ||||||||  || |||||||||    
T  15605132 attgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgttaagtgattataatgtgat 15605231  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    |||   ||| | |||||||||||||||||| |||||| | | ||| ||||||||||    
T  15605232 ttattgattgattgcattacttgaattattattgaatgatcaagaagttgttgaaa 15605287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 1859014 - 1859111
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||| ||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||| ||||||||    
T  1859014 tgttatgaactgctaagttgtttgtagtgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaaagaattgtt 1859111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 42204145 - 42204076
Alignment:
Q  149 attaaatgcattacttgaattattcttgaataaactagatgttgttg-aaatgaattgttgctatgaaat 217  Q
    |||||||||||||||||| |||||||||||||| || |||||||||| |||||||||||||  |||||||    
T  42204145 attaaatgcattacttgatttattcttgaataaccttgatgttgttgaaaatgaattgttgtcatgaaat 42204076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 2832393 - 2832464
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||| ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  2832393 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 2832464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 7519325 - 7519383
Alignment:
Q  149 attaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||||    
T  7519325 attaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 7519383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 181
Target Start/End: Original strand, 70628 - 70763
Alignment:
Q  46 gattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgattta 145  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||| | |  || ||||||| | |   ||| || |||||  || ||||||||||||    
T  70628 gattaggaatggaactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagtgtttataatgtgattta 70727  T
Q  146 acaattaaatgcattacttgaattattcttgaataa 181  Q
       ||| | |||||||||||||||||| ||||||||    
T  70728 ttgattgattgcattacttgaattattattgaataa 70763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 181
Target Start/End: Original strand, 74737 - 74872
Alignment:
Q  46 gattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgattta 145  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||| | |  || ||||||| | |   ||| || |||||  || ||||||||||||    
T  74737 gattaggaatggaactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagtgtttataatgtgattta 74836  T
Q  146 acaattaaatgcattacttgaattattcttgaataa 181  Q
       ||| | |||||||||||||||||| ||||||||    
T  74837 ttgattgattgcattacttgaattattattgaataa 74872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 9751707 - 9751778
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||| ||||  ||||||||||||||||||| |||| |||||| | | ||||||||||| |||||||||    
T  9751707 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttggaatgaattg 9751778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 12318368 - 12318237
Alignment:
Q  48 ttaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaac 147  Q
    ||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| ||||||||  || ||||||||||||      
T  12318368 ttaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgttaagtgattataatgtgatttatt 12318269  T
Q  148 aattaaatgcattacttgaattattcttgaat 179  Q
     ||| | |||||||||||||||||| ||||||    
T  12318268 gattgattgcattacttgaattattattgaat 12318237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 39267851 - 39267922
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||| ||||  ||||||||||||||||||| || | |||||| | | |||||||||||||||||||||    
T  39267851 taatgtgaattaatgattaaatgcattacttgaaatagtattgaatgatcaagatgttgttgaaatgaattg 39267922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 33350 - 33217
Alignment:
Q  46 gattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgattta 145  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||| | |  || ||||||| | |   ||| || |||||  || ||||||||||||    
T  33350 gattaggaatggaactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagtgtttataatgtgattta 33251  T
Q  146 acaattaaatgcattacttgaattattcttgaat 179  Q
       ||| | |||||||||||||||||| ||||||    
T  33250 ttgattgattgcattacttgaattattattgaat 33217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 39722108 - 39722039
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  39722108 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 39722039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 12187277 - 12187199
Alignment:
Q  40 tgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaaga 118  Q
    ||||||||||||  ||||| ||||||||||||||||  ||||| ||||| |||| | | ||||||||||| || |||||    
T  12187277 tgaattgattagagatggaccattaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgataaga 12187199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 13635343 - 13635465
Alignment:
Q  57 gaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatg 156  Q
    |||| ||||||| |||||| ||||||||||||| ||| | |  | |||||||| | ||| ||| || |||||  || ||||||||||||   ||| | ||    
T  13635343 gaaccttaggtactaatgaggcctatttaagatattaacagagaactgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattg 13635442  T
Q  157 cattacttgaattattcttgaat 179  Q
    |||||||||||||||| ||||||    
T  13635443 cattacttgaattattattgaat 13635465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 17137898 - 17137988
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaag 109  Q
    ||||| |||| ||| ||||  ||||||||||||| ||||| | ||||||||||||||  ||||| ||||| |||| | | |||||||||||    
T  17137898 aatgttgtgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaag 17137988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24222176 - 24221954
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  24222176 gaactgaatgcttttgataaggtcgtgacctgagttgaatgaattgagtaggaatggaacattaggtagtaatgaaacctatttaagacgttagccggaa 24222077  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24222076 tctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 24221977  T
Q  200 gaattgttgctatgaaatgatga 222  Q
    ||||||||| |||||||| ||||    
T  24221976 gaattgttgttatgaaattatga 24221954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 12028383 - 12028600
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | |  |    
T  12028383 gaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaagatgttaactgaga 12028481  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||| |||    
T  12028482 cctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattctcgaataaacttgatgttgttgaaaa 12028581  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  12028582 tgaattgttgttatgaaat 12028600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 22757424 - 22757207
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||||||| | |  |    
T  22757424 gaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagttgtgaaacctatttaagatgttaactgaga 22757326  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
     ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||| |||    
T  22757325 cctgtgaagttgttaagaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattattgaataaacttgatgttgttgaaaa 22757226  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  22757225 tgaattgttgttatgaaat 22757207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 26680878 - 26680659
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||||||| |||||||||||||||  || |||||||||||||||| ||||||||||||||||| |||||||||||||||| | |  |    
T  26680878 gaactgagtgcttttgataatttcgtgacctgagttgtttggattgattaggaatgga-cattaggtagtaatgaaacctatttaagatgttaactgaga 26680780  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaa-ctagatgttgttgaaa 198  Q
      |||||||||||||||||||   |||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||| || |||||| ||||||    
T  26680779 cttgtgaagttgttaagaact---aagttgtttgtaatgtgatttaacgatcaaatgcattacttgaattattcttgaataaaccttgatgttattgaaa 26680683  T
Q  199 tgaattgttgctatgaaatgatga 222  Q
    ||||||||| ||||||||| ||||    
T  26680682 tgaattgttactatgaaattatga 26680659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 26952485 - 26952266
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||||||| |||||||||||||||  || |||||||||||||||| ||||||||||||||||| |||||||||||||||| | |  |    
T  26952485 gaactgagtgcttttgataatttcgtgacctgagttgtttggattgattaggaatgga-cattaggtagtaatgaaacctatttaagatgttaactgaga 26952387  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaa-ctagatgttgttgaaa 198  Q
      |||||||||||||||||||   |||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||| || |||||| ||||||    
T  26952386 cttgtgaagttgttaagaact---aagttgtttgtaatgtgatttaacgatcaaatgcattacttgaattattcttgaataaaccttgatgttattgaaa 26952290  T
Q  199 tgaattgttgctatgaaatgatga 222  Q
    ||||||||| ||||||||| ||||    
T  26952289 tgaattgttactatgaaattatga 26952266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 17918969 - 17919186
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||||||||||||||  || |||| ||||||||| ||| ||||||||||| ||| ||||||||| |||||    |       
T  17918969 gaactgagtgcttttgataatgtcgtgacctgagttgtttggattggttaggaatgaaactttaggtagtaaggaaacctatttaatatgttgagtgagg 17919068  T
Q  101 tctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaat 199  Q
    |||||||   ||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||| || |||||||||| ||||    
T  17919069 tctgtgagactgttatgaattgttaagttgttgtaatgtgatttaaagattaaatgcattacttgatttattcttgaataaccttgatgttgttgaaaat 17919168  T
Q  200 gaattgttgctatgaaat 217  Q
    ||||||||| ||||||||    
T  17919169 gaattgttgttatgaaat 17919186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 123131 - 123340
Alignment:
Q  9 tgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaa 108  Q
    |||||||| ||||||||| ||||||||||  || |||| ||||||||||||| ||||||||||||    ||||| | |||||||| | |  ||||||||     
T  123131 tgcttttgttaatgtcgtaacctgagttgtttggattggttaggaatggaaccttaggtagtaatatgacctatgtgagatgttaactgagatctgtgag 123230  T
Q  109 gttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaatgaattgtt 207  Q
    | ||||| ||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||    
T  123231 gctgttatgaattgttaagctgttgtaatgtgatttaaagattaaatgcattacttgaattattcttgaataactttgatgttgttgaaaatgaattgtt 123330  T
Q  208 gctatgaaat 217  Q
    |  |||||||    
T  123331 gtgatgaaat 123340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 23451645 - 23451431
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| ||||| | |||||||||||  ||||||||||||||||||||| |||||||||| |||  |||||||||||||||| | | ||    
T  23451645 gaactgagtgcatttgagaatgttgagacctgagttgtttgaattgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaa 23451546  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||||| | ||||  |||||| ||||||| |||||| |||||||||| ||||||||||||||||||| |||| |||||| |    |||||||||||||     
T  23451545 tctgtgaggctgtt-tgaactgctaagttgtttgtaaagtgatttaacgattaaatgcattacttgaaatattattgaatgattatgatgttgttgaaaa 23451447  T
Q  200 gaattgttgctatgaa 215  Q
    |||||| || ||||||    
T  23451446 gaattgatgttatgaa 23451431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 23458889 - 23458711
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| ||||| | |||||||||||  ||||||||||||||||||||| |||||||||| |||  |||||||||||||||| | | ||    
T  23458889 gaactgagtgcatttgagaatgttgagacctgagttgtttgaattgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaa 23458790  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||||| | ||||  |||||| ||||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  23458789 tctgtgaggctgtt-tgaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaaatattattgaat 23458711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 23463150 - 23462972
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| ||||| | |||||||||||  ||||||||||||||||||||| |||||||||| |||  |||||||||||||||| | | ||    
T  23463150 gaactgagtgcatttgagaatgttgagacctgagttgtttgaattgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaa 23463051  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||||| | ||||  |||||| ||||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  23463050 tctgtgaggctgtt-tgaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaaatattattgaat 23462972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 31342405 - 31342216
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| | |  |    
T  31342405 gaactgaatgtttttgataacgtcgtgacctgagttgaatgaattgattaggaatgg-acattaggtagtaaggaaacctatttaagatgttaactgaga 31342307  T
Q  101 tctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaat 199  Q
     || |||||||||                 ||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||| ||||    
T  31342306 cct-tgaagttgt-----------------ttgtaatgtgatttaacgattaattgcattacttgaattatccttgaataaacttgatgttgttgaaaat 31342225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 1858794 - 1859010
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| ||||||||||| |||||||| |||||||||||||| |||||| |||||||||| |||  | ||||||||||||||   | ||    
T  1858794 gaactgagtgcatttgagaatgtcgtgacttgagttgattgaattgattaggattggaac-ttaggtagtagtgagacatatttaagatgttaattgaaa 1858892  T
Q  101 -tctgtgaagttgttaagaactgttaa--gttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttga 196  Q
     ||||||| | ||||  |||||  |||  |||||| ||||||||||||||| ||||||||||||||||||| |||| |||||| |    |||||||||||    
T  1858893 atctgtgaggctgttt-gaactactaattgttgtttgtaatgtgatttaacgattaaatgcattacttgaaatattattgaatgattatgatgttgttga 1858991  T
Q  197 aatgaattgttgctatgaa 215  Q
    |||||||||||| ||||||    
T  1858992 aatgaattgttgttatgaa 1859010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 21366524 - 21366688
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    |||||||||||  |||| | |||||||||||||   |||||||||||||||| | |  |||||||||| || || ||||||||||| || || |||||||    
T  21366524 aattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgctatgaactgttaagctgattataatgtg 21366623  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| ||||||||||||| |||| |||||| | | |||||||| ||||||||||||    
T  21366624 atttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 21366688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 18356134 - 18356037
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  18356134 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 18356037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 20911099 - 20911196
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  20911099 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 20911196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 20805808 - 20805653
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtg 140  Q
    |||||||||||  | || | |||||||||||||   |||||||||||||||| | | ||||||||| | ||||  |||||| |||||| || ||||||||    
T  20805808 aattgattagggtttgacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaggctgtt-tgaactgctaagttattggtaatgtg 20805710  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaa 197  Q
    ||||||  ||||||||||||||||||| | || |||||| | |||||||||||||||    
T  20805709 atttaatgattaaatgcattacttgaaatgttattgaatgatctagatgttgttgaa 20805653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 10753208 - 10753109
Alignment:
Q  109 gttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||| ||||||||||||    
T  10753208 gttgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttaaaatgaattgtt 10753109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 197
Target Start/End: Complemental strand, 20767207 - 20767075
Alignment:
Q  65 ggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattact 163  Q
    ||||||||||   |||||||||||||||| | | ||||||||| | ||||  |||||  |||||||||| |||||||||||||  |||||||||||||||    
T  20767207 ggtagtaatgtgacctatttaagatgttaactgaaatctgtgaggctgttt-gaactactaagttgttggtaatgtgatttaatgattaaatgcattact 20767109  T
Q  164 tgaattattcttgaataaactagatgttgttgaa 197  Q
    |||| | || |||||| | |||||||||||||||    
T  20767108 tgaaatgttattgaatgatctagatgttgttgaa 20767075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 24767497 - 24767568
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||| ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  24767497 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 24767568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 15236643 - 15236776
Alignment:
Q  46 gattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgattta 145  Q
    ||||||||||||||| || |||| ||||||  ||||| |||||||||| | |  || ||||||| | |   ||| || |||||  || ||||||||||||    
T  15236643 gattaggaatggaacctttggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaagtgtttataatgtgattta 15236742  T
Q  146 acaattaaatgcattacttgaattattcttgaat 179  Q
      |||| | |||||||||||||||||||||||||    
T  15236743 ttaattgattgcattacttgaattattcttgaat 15236776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 18769839 - 18769929
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaag 109  Q
    ||||| |||| ||| ||||  ||||||||||||| ||||| | ||||||||||||||  ||||| ||||| |||| | | |||||||||||    
T  18769839 aatgtagtgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaag 18769929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 11220590 - 11220521
Alignment:
Q  111 tgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| |||||||||  |||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  11220590 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 11220521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 11228999 - 11228930
Alignment:
Q  111 tgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| |||||||||  |||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  11228999 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 11228930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 11230988 - 11230919
Alignment:
Q  111 tgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| |||||||||  |||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  11230988 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 11230919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 17410708 - 17410647
Alignment:
Q  28 acctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagat 89  Q
    ||||||||||  || |||||||||||| ||||| ||||||| ||||||  ||||||||||||    
T  17410708 acctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagat 17410647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 23572363 - 23572270
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttg 112  Q
    ||||| |||| || |||||  ||||||||||||| ||||| | ||||||||||||||  ||||| ||||| |||| | | ||| ||||||||||    
T  23572363 aatgttgtgatctaagttgcttgaattgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatttgtgaagttg 23572270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 40723851 - 40723904
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattact 163  Q
    ||||| |||||| ||||||||| ||||||||||||||  |||||||||||||||    
T  40723851 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattact 40723904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 2e-97; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 16351666 - 16351881
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16351666 gaactgaatgcttttgataaaatcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaagatgttagccggaa 16351765  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    | ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16351766 tttgtgaagtttttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 16351865  T
Q  200 gaattgttgctatgaa 215  Q
    ||||||||| ||||||    
T  16351866 gaattgttgttatgaa 16351881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 25555804 - 25555587
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| | |  |    
T  25555804 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacttatttaagatgttaactgaga 25555706  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  25555705 cctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacttgatgttgttgaaaa 25555606  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  25555605 tgaattgttgttatgaaat 25555587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 11250379 - 11250596
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | |  |    
T  11250379 gaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaagatgttaactgaga 11250477  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
     || |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| |||    
T  11250478 cctatgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacatgaattattcttgaataaacttgatgttgttgaaaa 11250577  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  11250578 tgaattgttgttatgaaat 11250596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 15353124 - 15353347
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||| |||||  ||||||||||||  || |||| ||||||||||||| ||||||||||||||| ||||| |||||||||| | ||||    
T  15353124 gaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatctaagatgttaactggaa 15353223  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataa-actagatgttgttgaaa 198  Q
    | ||||||| ||||| ||| ||||||| || ||||||||||||||||  |||||||||||||||||| ||||||||||||||  || |||||||||||||    
T  15353224 tttgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaataatccttgatgttgttgaaa 15353323  T
Q  199 tgaattgttgctatgaaatgatga 222  Q
    |||||||||| |||||||| ||||    
T  15353324 tgaattgttgttatgaaattatga 15353347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 5338801 - 5339003
Alignment:
Q  4 ctgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatct 103  Q
    |||| ||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||  ||||| ||||||||||   | |||||    
T  5338801 ctgagtgcatttgagaatgtcgtgacctgaattgattgaattgattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaatct 5338900  T
Q  104 gtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaa 202  Q
    | |||| ||||| ||||  ||||| || || | ||||||||||   ||||| ||||||||||||  |||| |||||||| | |||| |||||||||||||    
T  5338901 gagaagctgttatgaaccattaagctgattatgatgtgatttattgattaattgcattacttgagatattattgaataatcaagattttgttgaaatgaa 5339000  T
Q  203 ttg 205  Q
    |||    
T  5339001 ttg 5339003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 16356813 - 16356974
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgat 142  Q
    |||||||||  |||| | |||||||||||||   |||||||||||||||| | | ||||||||||| ||||  |||||| |||||| || ||||||||||    
T  16356813 ttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgttt-gaactgctaagttttttgtaatgtgat 16356911  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  ||||||||||||||||||| |||| |||||| | | ||||||||| |||||||||||    
T  16356912 ttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgtggaaatgaattg 16356974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 16348525 - 16348686
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgat 142  Q
    |||||||||  |||| | |||||||||||||   |||||||||||||||| | | ||||||||||| | || | ||||| ||||||||| ||||||||||    
T  16348525 ttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagcttttta-aactgctaagttgtttgtaatgtgat 16348623  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  |||||||||||||||| || |||| |||||| | | ||||||||| |||||||||||    
T  16348624 ttaatgattaaatgcattacttaaaatattattgaattatcaagatgttgtggaaatgaattg 16348686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 16487938 - 16488100
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgat 142  Q
    |||||| || ||||| | |||||||||||||   ||||||||||||||||   |  |||||||||| |  || ||||||||||| || || |||||||||    
T  16487938 ttgatttgggatggacccttaggtagtaatgtgtcctatttaagatgttaattgagatctgtgaagctactatgaactgttaagctgattataatgtgat 16488037  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||| ||||||    
T  16488038 ttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaaagaattg 16488100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 43256341 - 43256438
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  43256341 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 43256438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 20157411 - 20157482
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||| ||||  ||||||||||||||||||| |||| |||||| | |||||||||||||||||||||||    
T  20157411 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatctagatgttgttgaaatgaattg 20157482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 13812970 - 13813041
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||| ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  13812970 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 13813041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 17810534 - 17810382
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    ||||||||| |  ||||| ||||||||||||||| ||||||| ||||||  ||||| |||||||||| | |  || ||||||| | |   ||| ||||||    
T  17810534 gacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgttaa 17810435  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| ||||||    
T  17810434 gtgtttataatgtgatttattgattgattgcattacttgaattattattgaat 17810382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 167
Target Start/End: Complemental strand, 12570259 - 12570156
Alignment:
Q  65 ggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattact 163  Q
    ||||||||||   ||||| || ||||||| | | ||||||||||| ||||| ||| |||||||||| || |||||||||||||  ||||| |||||||||    
T  12570259 ggtagtaatgtgacctatataggatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 12570160  T
Q  164 tgaa 167  Q
    ||||    
T  12570159 tgaa 12570156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 15225018 - 15224960
Alignment:
Q  149 attaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||||||||||||||||| |||| |||||| | | |||||||||| ||||||||||||    
T  15225018 attaaatgcattacttgaaatattattgaatgaccaagatgttgttaaaatgaattgtt 15224960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 10712698 - 10712629
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  10712698 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 10712629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 10926468 - 10926399
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  10926468 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 10926399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 36133806 - 36133958
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  ||  ||||||||||| | ||| ||||||| ||||||  |||||||||||| ||| | || | |||||||| | ||| ||| || |||    
T  36133806 gacctgagttgcttgggttgattaggaaagaaactttaggtattaatgagacctatttaagatattaactgggaactgtgaagctattatgaaatgctaa 36133905  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||  || ||||||||||||   ||| | |||||||||||| ||||| ||||||    
T  36133906 gtgattataatgtgatttattgattgattgcattacttgagttattattgaat 36133958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 202
Target Start/End: Original strand, 43256021 - 43256179
Alignment:
Q  43 attgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgat 142  Q
    |||||||||||  ||||| ||||||| ||||||  |||||||||||||||| | || | |||||||| | ||  ||| ||||||||  || |||||||||    
T  43256021 attgattaggagaggaaccttaggtactaatgagacctatttaagatgttaactgggaactgtgaagctattgtgaaatgttaagtgattataatgtgat 43256120  T
Q  143 ttaacaattaaatgcattactt--gaattattcttgaataaactagatgttgttgaaatgaa 202  Q
     |||  |||| |||||||||||  |||||||  |||||||  | ||||||||||||| ||||    
T  43256121 ataa-tattatatgcattacttaagaattat--ttgaatattcaagatgttgttgaattgaa 43256179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 12487553 - 12487484
Alignment:
Q  111 tgttaagaactgttaagttgttgt-aatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| | ||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  12487553 tgttatgaactgctaagttgtttttaatgtgatttaatgattaaatgcattactcgaaatattattgaat 12487484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 22634373 - 22634418
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    |||||||| ||||  |||||||||||||||||||||||| ||||||    
T  22634373 taatgtgaattaatgattaaatgcattacttgaattattattgaat 22634418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 179; Significance: 9e-97; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 11557202 - 11557424
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||    
T  11557202 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaactttaggtagtaatgaaacctatttaaggtgttagctggaa 11557301  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  11557302 tctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaattagatgttgatgaaat 11557401  T
Q  200 gaattgttgctatgaaatgatga 222  Q
    ||||||||| |||||||| ||||    
T  11557402 gaattgttgttatgaaattatga 11557424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 11594957 - 11595174
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | |  |    
T  11594957 gaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaagatgttaactgaga 11595055  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  11595056 cctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacttgatgttgttgaaaa 11595155  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  11595156 tgaattgttgttatgaaat 11595174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 3389761 - 3389971
Alignment:
Q  9 tgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaa 108  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   |||||||||||||||| | |  | |||||||    
T  3389761 tgcttttgagaatgtcgtgacctgagttgaatgaattgagtaggaatggaactttaggtagtaatgtgacctatttaagatgttaactgagacctgtgaa 3389860  T
Q  109 gttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaatgaattgt 206  Q
    | ||||| ||| ||||||| || ||||||||||||||||  |||||||||||||||||| ||||||||||| || || |||||||||| |||||||||||    
T  3389861 gctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaaaaaccttgatgttgttgaaaatgaattgt 3389960  T
Q  207 tgctatgaaat 217  Q
    ||  |||||||    
T  3389961 tgtcatgaaat 3389971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 42326232 - 42326023
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||  ||       |||  ||||||||||||||| |||||||||||||||| | |  |    
T  42326232 gaactgagtgcttttgataatgtcgtcacctgagttgaatgaattactt-------gaa--ttaggtagtaatgaaacctatttaagatgttaactgaga 42326142  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
      |||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||| |||    
T  42326141 cttgtgaagttgttaagaactgttaacttgtttgtaatgtgatttaacgattaaatgcattacttgaattattctcgaataaacttgatgttgttgaaaa 42326042  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  42326041 tgaattgttgttatgaaat 42326023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 3402783 - 3402991
Alignment:
Q  11 cttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagt 110  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||   |||||||||||||||| | |  | ||||||||     
T  3402783 cttttgagaatgtcgtgacctgagttgaatgaattgagtaggaatgaaactttaggtagtaatgtgacctatttaagatgttaactgagacctgtgaagc 3402882  T
Q  111 tgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaatgaattgttg 208  Q
    | ||| ||| ||||||| || ||||||||||||||||  |||||||||||| ||||| |||||||||||||| || |||||||||| |||||||||||||    
T  3402883 tattatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattccttgatttattcttgaataaccttgatgttgttgaaaatgaattgttg 3402982  T
Q  209 ctatgaaat 217  Q
      |||||||    
T  3402983 tcatgaaat 3402991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 215
Target Start/End: Original strand, 1982654 - 1982843
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || |||| ||||||||||| | |||||||||||||   |||| ||||||||||| | | ||| ||||||||||||| ||||||||||    
T  1982654 gacctgagttgtttggattggttaggaatggagccttaggtagtaatgtgacctaattaagatgttaactgcaatatgtgaagttgttatgaactgttaa 1982753  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaatgaattgttgctatgaa 215  Q
    ||| ||||||||||||||||  ||||||||||||||||||| |||| |||||| | ||| ||||||||| ||||||||||||| ||||||    
T  1982754 gttattgtaatgtgatttaatgattaaatgcattacttgaactatttttgaatgacctatatgttgttgaaaatgaattgttgttatgaa 1982843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 205
Target Start/End: Complemental strand, 12496513 - 12496352
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgat 142  Q
    |||||||||  |||| | |||||||||||||   |||||||||||||||| | | ||||||||||| ||||  |||||| ||||||||| ||||||||||    
T  12496513 ttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgttt-gaactgctaagttgtttgtaatgtgat 12496415  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  ||||||||||||||||||| |||| |||||| | | ||||||||| |||||||||||    
T  12496414 ttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgtagaaatgaattg 12496352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 11863051 - 11862887
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    |||||||||||| |||| | ||||||| |||||   ||||||||||||||||   | ||||||||||| || || ||||||||||| || || | |||||    
T  11863051 aattgattaggattggacccttaggtattaatgtgacctatttaagatgttatttgaaatctgtgaagctgctatgaactgttaagctgattatgatgtg 11862952  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| ||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  11862951 atttaatgattaattgcattacttgaaatattattgaatgaccaagatgttgttgaaatgaattg 11862887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 18383775 - 18383939
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    |||||||||||  |||| | |||||||||||||   |||||||||||||||| | |  ||| |||||| ||||| ||||||||||| || || |||||||    
T  18383775 aattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatcagtgaagctgttatgaactgttaagctgattttaatgtg 18383874  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| ||||||||||||| |||| |||||| | | |||||||| ||||||||||||    
T  18383875 atttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 18383939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 11298389 - 11298550
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgat 142  Q
    |||||||||  |||| | |||||||||||||   |||||||||||| ||| | | ||| ||||| | ||||  |||||| ||||||||| ||||||||||    
T  11298389 ttgattagggttggacccttaggtagtaatgtgacctatttaagatattaactgaaatttgtgaggctgttt-gaactgctaagttgtttgtaatgtgat 11298487  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  11298488 ttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 11298550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 322849 - 322685
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    |||||||||||  |||| | |||||||||||||   |||||||||||||||| |    |||||||||| ||||| ||| ||||||| || || |||||||    
T  322849 aattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactaagatctgtgaagctgttatgaagtgttaagctgattataatgtg 322750  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| ||||||||||||| |||| |||||| | | |||||||| ||||||||||||    
T  322749 atttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 322685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 11851803 - 11851675
Alignment:
Q  78 cctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttg 176  Q
    |||||||||||||||| | | ||| ||||||| || || ||||||||||| || || | |||||||||||  ||||| ||||||||||||| |||| |||    
T  11851803 cctatttaagatgttatctgaaatttgtgaagctgctatgaactgttaagctgattatgatgtgatttaatgattaattgcattacttgaaatattattg 11851704  T
Q  177 aataaactagatgttgttgaaatgaattg 205  Q
    ||| ||| |||||||||||||||||||||    
T  11851703 aatgaacaagatgttgttgaaatgaattg 11851675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 4589037 - 4589134
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  4589037 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 4589134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 5223241 - 5223144
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  5223241 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 5223144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 12339643 - 12339546
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  12339643 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 12339546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 19725770 - 19725934
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    |||||||||||  |||| | |||||||||||||   || ||||||||||| | | | ||||||||||  || || ||||||||||| || || |||||||    
T  19725770 aattgattagggttggacccttaggtagtaatgtgacccatttaagatgtcaactgaaatctgtgaaactgctatgaactgttaagctgattataatgtg 19725869  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| | ||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  19725870 atttaatgattaattacattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 19725934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26190826 - 26190918
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgtta 93  Q
    ||||||| |||  |||| |||||| ||||||||||||  || |||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  26190826 gaactgagtgcaattgagaatgtcatgacctgagttgcttggattgattaggaatggaactttaggtagtaatgagacctatttaagatgtta 26190918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 11300694 - 11300791
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||| ||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  11300694 tgttatgaactgctaagttgtttgtaatttgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 11300791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 217
Target Start/End: Original strand, 12037890 - 12037987
Alignment:
Q  121 tgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgttgctatgaaat 217  Q
    |||||||||| || |||||||||||||  ||||| ||||||||||||  |||| |||||| | | |||||||||||||||||||||||| ||||||||    
T  12037890 tgttaagttgattataatgtgatttaatgattaattgcattacttgagatattattgaatgatcaagatgttgttgaaatgaattgttgttatgaaat 12037987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 15465042 - 15464945
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||| ||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  15465042 tgttatgaactgctaagttgtttgtagtgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 15464945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 19775610 - 19775513
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||| ||||||||||||    
T  19775610 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttaaaatgaattgtt 19775513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 20461344 - 20461523
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || |||||||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| || |||    
T  20461344 gacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 20461443  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaa-atgaattg 205  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| |||||| | | ||| ||||||||| ||||||||    
T  20461444 gtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaagaagttgttgaagatgaattg 20461523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 166
Target Start/End: Complemental strand, 15060555 - 15060427
Alignment:
Q  39 atgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaat 137  Q
    |||||||||||||| ||||| | |||||||||| ||   ||||| ||||||| || | | ||||||||||| | ||| |||||||||||||| || ||||    
T  15060555 atgaattgattagggatggacccttaggtagtattgtgacctatataagatggtaactgcaatctgtgaagctattatgaactgttaagttgattataat 15060456  T
Q  138 gtgatttaacaattaaatgcattacttga 166  Q
    |||||||||  ||||| | ||||||||||    
T  15060455 gtgatttaatgattaatttcattacttga 15060427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 14665566 - 14665495
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||| ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  14665566 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 14665495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 326982 - 327160
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||  || | | |||||||||||  || ||||||||| || ||||| ||||||| ||||||  |||||||||||| ||| | |  |    
T  326982 gaactgagtgcttttgaggattttgagacctgagttgcttggattgattagaaaaggaaccttaggtactaatgagacctatttaagatattaactgaga 327081  T
Q  101 tctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
     |||||||| | ||| ||| || |||||  || ||||||||||||   ||| | |||||||||||||||||| ||||||    
T  327082 actgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaat 327160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 2897667 - 2897819
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  |  ||||||||||| |||||| ||||||| || ||| ||||||||||||||||| | |  | |||||||| | ||| ||| || |||    
T  2897667 gacctgagttgcttagattgattaggagtggaactttaggtaatagtgaggcctatttaagatgttaactgttaactgtgaagctattatgaaatgctaa 2897766  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||  || ||||||||||||   ||| | ||||||||| |||||||| ||||||    
T  2897767 gtgattataatgtgatttattgattgattgcattactggaattattattgaat 2897819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 14668707 - 14668651
Alignment:
Q  149 attaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  14668707 attaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 14668651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 15051779 - 15051671
Alignment:
Q  39 atgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaat 137  Q
    |||||||||||||| ||||| | |||||||||| ||   ||||| |||||||||| | | ||| ||||||| | ||| |||||||||||||| || ||||    
T  15051779 atgaattgattagggatggacccttaggtagtattgtgacctatataagatgttaactgcaatttgtgaagctattatgaactgttaagttgattataat 15051680  T
Q  138 gtgatttaa 146  Q
    |||||||||    
T  15051679 gtgatttaa 15051671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 16910033 - 16909905
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaaga 118  Q
    |||||| ||| ||| ||||  ||||||||||||| ||||| | |||||||||||||   |||||  ||||||||| | | ||||||||||| | ||| ||    
T  16910033 aatgtcatgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgtgacctatacaagatgttaactgcaatctgtgaagcttttatga 16909934  T
Q  119 actgttaagttg-ttgtaatgtgatttaa 146  Q
    | |||||||||| || |||||||||||||    
T  16909933 attgttaagttgattataatgtgatttaa 16909905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 37439900 - 37439969
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  37439900 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 37439969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 16369691 - 16369543
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaaga 118  Q
    ||||||||||  || ||||  ||||||||||||| ||  | | |||||||||||||    |||| |||||||||| |   ||| ||||||| ||||| ||    
T  16369691 aatgtcgtgatatgtgttgcttgaattgattagggatacacccttaggtagtaatgtgatctatataagatgttaactccaatatgtgaagctgttatga 16369592  T
Q  119 actgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttga 166  Q
    |||||||||||| || |||||||||||||  ||||| | ||||||||||    
T  16369591 actgttaagttgattataatgtgatttaatcattaatttcattacttga 16369543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 30066211 - 30066059
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    ||||||||| |  ||||| ||||||||||||||| ||||||| ||||||  ||||| |||||||||| | |  || ||||||| | |   ||| || |||    
T  30066211 gacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaa 30066112  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| ||||||    
T  30066111 gtgtttataatgtgatttattgattgattgcattacttgaattattattgaat 30066059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 205
Target Start/End: Original strand, 7793213 - 7793372
Alignment:
Q  47 attaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaa 146  Q
    |||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| || |||||  || |||||||||||      
T  7793213 attaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagtgattataatgtgatttgt 7793312  T
Q  147 caattaaatgcattacttgaattattcttgaataaactagatgttgttgaa-atgaattg 205  Q
      ||| | |||||||||||||||||| |||||| | | ||| ||||||||| ||||||||    
T  7793313 tgattgattgcattacttgaattattattgaatgatcaagaagttgttgaagatgaattg 7793372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 856419 - 856329
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaag 109  Q
    ||||| |||| ||| ||||  ||||||||||||| ||||| | ||||||||||||||  ||||| ||||| |||| | | |||||||||||    
T  856419 aatgttgtgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaag 856329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 11165373 - 11165439
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgtta 93  Q
    ||||||||| |  ||||| ||||||||||||||| ||||||| ||||||  ||||| ||||||||||    
T  11165373 gacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaagatgtta 11165439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 12173007 - 12172938
Alignment:
Q  99 aatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaa 167  Q
    ||||||||||| ||||| ||| ||||||| || || |||||||||||||  ||||| |||||||||||||    
T  12173007 aatctgtgaagctgttatgaaatgttaagctgattataatgtgatttaatgattaattgcattacttgaa 12172938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 15482908 - 15482773
Alignment:
Q  43 attgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgtgat 142  Q
    ||||||||||||  |||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| || |||||  || |||||||||    
T  15482908 attgattaggaaatgaac-ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaagtgattataatgtgat 15482810  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaat 179  Q
    |||   ||| | |||||||||||||||||| ||||||    
T  15482809 ttattgattgattgcattacttgaattattattgaat 15482773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 27567427 - 27567644
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| || |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||| ||    
T  27567427 gaactgagtgttttttataatgtcgtgacctgagttgaatgaattgcttaggaatggaacattaggtagtactgaaacctatttaagatgtcagccgaaa 27567526  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  27567527 tctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgatttatgcttgaataaactagatgttgttgaaat 27567626  T
Q  200 gaattgttgctatgaaat 217  Q
    ||||||||| ||||||||    
T  27567627 gaattgttgttatgaaat 27567644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 19790597 - 19790814
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | |  |    
T  19790597 gaactgaatgtttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaagatgttaactgaga 19790695  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  19790696 cctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacttgatgttgttgaaaa 19790795  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  19790796 tgaattgttgttatgaaat 19790814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 20907799 - 20908021
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||| |||||  ||||||||||||  || |||| ||||||||||||| ||||||||||||||| |||||||||||||||| |  |||    
T  20907799 gaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactagaa 20907898  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  20907899 tctgggaagttgttaagaattgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcaagatgttgttgaaat 20907998  T
Q  200 gaattgttgctatgaaatgatga 222  Q
    ||||||||| |||||||| ||||    
T  20907999 gaattgttgttatgaaattatga 20908021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27553425 - 27553606
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||    
T  27553425 gaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaagatgtcagccagaa 27553524  T
Q  101 tctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||||||||||||                 ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27553525 tctgtgaagttgt-----------------ttgtaatgtgatttaacgattaaatgcattacttgatttattcttgaataaactagatgttgttgaaat 27553606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18180791 - 18180577
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |  | |||||||||||||| | | ||    
T  18180791 gaactgaatgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaactttaggtagtagtaagacatatttaagatgttaactgaaa 18180692  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||| | | ||||   ||||||||||||| ||||||||||||||||  ||||||||||||||||||| |||| |||||| |   |||||||||||||||    
T  18180691 tctgtaaggctgtt-tcaactgttaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaatgattaagatgttgttgaaat 18180593  T
Q  200 gaattgttgctatgaa 215  Q
    ||||||||| ||||||    
T  18180592 gaattgttgttatgaa 18180577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22408123 - 22408336
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||  |||| ||||| |||||||||||||  ||||||||||||||||||||| |||||||||| | |  | ||||||||||||||   | ||    
T  22408123 gaactgagtgcaattgagaatgttgtgacctgagttgcttgaattgattaggaatggaac-ttaggtagtagtaagacttatttaagatgttaattgaaa 22408221  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||||||   ||||  |||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  22408222 tctgtgagactgttt-gaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaaatattcttgaatgatctagatgttgttgaaat 22408320  T
Q  200 gaattgttgctatgaa 215  Q
    ||||||||| ||||||    
T  22408321 gaattgttgttatgaa 22408336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 39 - 205
Target Start/End: Complemental strand, 18907372 - 18907205
Alignment:
Q  39 atgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagtt-gttgtaat 137  Q
    |||||||||||||| ||||| | |||||||||||||   |||||||||||||||| | | ||| ||||||| ||||| |||||||||||||  || ||||    
T  18907372 atgaattgattagggatggacccttaggtagtaatgtgacctatttaagatgttaactgcaatatgtgaagctgttatgaactgttaagttcattataat 18907273  T
Q  138 gtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||||  ||||| ||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  18907272 gtgatttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 18907205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 23657238 - 23657418
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||||||||||||||   | |||| ||| ||||||||| ||||||||||||     |||| | |||||||| | |  |    
T  23657238 gaactgagtgcttttgataatgtcgtgacctgagttgttcggattggttaagaatggaactttaggtagtaatatgatctatgtgagatgttaactgaga 23657337  T
Q  101 tctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataa 181  Q
    ||||||| | ||||| ||  ||||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  23657338 tctgtgaggctgttatgatatgttaagctgttgtaatgtgatttaaagattaaatgcattacttgatttattcttgaataa 23657418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 1644550 - 1644453
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  1644550 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatatttttgaatgatcaagatgttgttgaaatgaattgtt 1644453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 21834784 - 21834910
Alignment:
Q  78 cctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttg 176  Q
    |||||||||||||||| | | ||||||||||| |||| |  |||| ||||||| || |||||||||||||  |||||||| |||||||||| |||| |||    
T  21834784 cctatttaagatgttaactgaaatctgtgaagctgttta--actgctaagttgattataatgtgatttaatgattaaatgtattacttgaaatattattg 21834881  T
Q  177 aataaactagatgttgttgaaatgaattg 205  Q
    ||| | | |||||||||||||||||||||    
T  21834882 aatgatcaagatgttgttgaaatgaattg 21834910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 23414822 - 23414725
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  23414822 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 23414725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 27556580 - 27556483
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  27556580 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 27556483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 31478074 - 31478171
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||||||| |||| |||||| | | |||||||||| ||||||||||||    
T  31478074 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttaaaatgaattgtt 31478171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 17804459 - 17804280
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || |||||||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| || |||    
T  17804459 gacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 17804360  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaa-atgaattg 205  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| |||||| | | ||| ||||||||| ||||||||    
T  17804359 gtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaagaagttgttgaagatgaattg 17804280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 27416122 - 27416219
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  |||||||||||||||  || ||||  ||||| | | |||||||||||||||||||||||    
T  27416122 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactctaaatattaatgaatgatcaagatgttgttgaaatgaattgtt 27416219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 22429887 - 22430019
Alignment:
Q  40 tgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgt 139  Q
    ||||||||||||||||||||| ||||||  |  |||  |||||||||||||||||| |  | |||||||||| ||| ||| || |||||  || ||||||    
T  22429887 tgaattgattaggaatggaactttaggttatggtgagacctatttaagatgttagctgagaactgtgaagttattatgaaatgctaagtgattataatgt 22429986  T
Q  140 gatttaacaattaaatgcattacttgaattatt 172  Q
    ||||||   ||| | ||||||||||||||||||    
T  22429987 gatttattgattgattgcattacttgaattatt 22430019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 15894344 - 15894413
Alignment:
Q  99 aatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaa 167  Q
    ||||||||||| ||||| ||| |||||||||| || |||||||||||||  ||||| |||||||||||||    
T  15894344 aatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattacttgaa 15894413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 14472532 - 14472380
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    ||||||||| |  ||||| ||||||||||||||| ||||||| ||||||  ||||| |||||||||| | |  || ||||||| | |   ||| || |||    
T  14472532 gacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaa 14472433  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| ||||||    
T  14472432 gtgtttataatgtgatttattgattgattgcattacttgaattattattgaat 14472380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 14472107 - 14472044
Alignment:
Q  117 gaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  14472107 gaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 14472044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 16523336 - 16523407
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||||||||  ||||| |||||||| |||| |||| |||||| | | |||||||| ||||||||||||    
T  16523336 taatgtgatttaatgattaattgcattacctgaaatattattgaatgatcaagatgttgatgaaatgaattg 16523407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 18956033 - 18956096
Alignment:
Q  117 gaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  18956033 gaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 18956096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 21766839 - 21766789
Alignment:
Q  155 tgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  21766839 tgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 21766789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22059560 - 22059630
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagta 71  Q
    ||||||| |||  |||| ||||||||||| |||||||  ||||||||| ||||||| ||| ||||||||||    
T  22059560 gaactgagtgcaattgagaatgtcgtgacttgagttgcttgaattgatgaggaatgaaactttaggtagta 22059630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 27415786 - 27415852
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgtta 93  Q
    |||||||||||  || |||||||||||  ||||| ||||||| ||||||  ||||||||||||||||    
T  27415786 gacctgagttgcttggattgattaggagaggaaccttaggtactaatgagacctatttaagatgtta 27415852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 16760137 - 16760068
Alignment:
Q  111 tgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| |||||||||  |||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  16760137 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 16760068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 8859 - 8642
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| | |  |    
T  8859 gaactgagtgcttttgataatgtcgtgacctgagttgaatgaattggttaggaatgga-cattaggtagtaatgaaacctatttaagatgttaactgaga 8761  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  8760 cctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacttgatgttgttgaaaa 8661  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  8660 tgaattgttgttatgaaat 8642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 45489561 - 45489778
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | |  |    
T  45489561 gaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaagatgttaactgaga 45489659  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||| |||    
T  45489660 cctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattctcgaataaacttgatgttgttgaaaa 45489759  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  45489760 tgaattgttgttatgaaat 45489778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 3704890 - 3705099
Alignment:
Q  9 tgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaa 108  Q
    ||||||||| |||||  |||||||| |||  || ||||  |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  3704890 tgcttttgacaatgttatgacctgatttgtttggattggctaggaatggaactttaggtagtaatgaaacctatttaagatgttagccggaatctgtgaa 3704989  T
Q  109 gttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3704990 gttgttaagaactattaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 3705089  T
Q  208 gctatgaaat 217  Q
    | ||||||||    
T  3705090 gttatgaaat 3705099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 45310184 - 45310382
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||||| | |  |    
T  45310184 gaactgagtgcttttgagattgtcgtgacctgagttgattgaattgattaggaatggaactttaggtagtaatgtggcctatttaagatgttaactgaga 45310283  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    ||||||||| ||||| ||| ||||||| || ||||||||||||||||  |||||||||||| ||||| |||||||||||||| || || ||||||||||    
T  45310284 tctgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattgcttgatttattcttgaataaccttgaagttgttgaaa 45310382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 18393789 - 18393979
Alignment:
Q  9 tgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaa 108  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||||||| |||||||||||||   |||||||||||||||| | |  |||||||||    
T  18393789 tgcttttgagattgtcgtgacctgagttgattgaattgattaggaatggaactttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaa 18393888  T
Q  109 gttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    | ||||| ||| ||||||| || ||||||||||||||||  |||||||||||||||||| |||||||||||||| || || ||||||||||    
T  18393889 gctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaataaccttgaagttgttgaaa 18393979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 17678405 - 17678619
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |  | |||||||||||||| | | ||    
T  17678405 gaactgagtgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaactttaggtagtagtaagacatatttaagatgttaactgaaa 17678504  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||| | | ||||  |||||||||||||| ||||||||| ||||||  ||||||||||||||||||| |||| |||||| |   |||||||||||||||    
T  17678505 tctgtaaggctgtt-tgaactgttaagttgtttgtaatgttatttaatgattaaatgcattacttgaaatattattgaatgattaagatgttgttgaaat 17678603  T
Q  200 gaattgttgctatgaa 215  Q
    ||||||||| ||||||    
T  17678604 gaattgttgttatgaa 17678619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 8761450 - 8761655
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||| || ||||||||||||||||  || |||| ||||||||||||| |||||||||| |||| ||||| ||||||||||   | ||    
T  8761450 gaactgagtgcttttgagaacgtcgtgacctgagttgcttggattggttaggaatggaactttaggtagtagtgaaacctatataagatgttaaatgaaa 8761549  T
Q  101 tctgtgaagttgttaagaactgttaag-ttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||||||| ||||| ||||| ||||| |  || | ||||||||||   ||||| ||||||||||||  |||| |||||||| | |||||||||||||||    
T  8761550 tctgtgaagctgttatgaactattaagctaattatgatgtgatttattgattaattgcattacttgagatattattgaataatcaagatgttgttgaaat 8761649  T
Q  200 gaattg 205  Q
    ||||||    
T  8761650 gaattg 8761655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33049905 - 33049989
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaa 86  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  33049905 gaactgaatgcttttgataatgtcgtaacctgagttgaatgaattgattaggaat-gaacattaggtagtaatgaaacctatttaa 33049989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 22449101 - 22449281
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaaga 118  Q
    ||||| |||| ||||||||  ||||||||||||||||||| | |||||||||||||   | ||| |||||||||| | | ||||||||||| ||||| ||    
T  22449101 aatgttgtgatctgagttgcttgaattgattaggaatggacccttaggtagtaatgtgacatatataagatgttaactgcaatctgtgaagctgttatga 22449200  T
Q  119 actgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    |||||||||||| || |||||||||||||  ||||| | ||||||||||| |||| |||||| | | ||||||||||||||    
T  22449201 actgttaagttgattataatgtgatttaatgattaatttcattacttgaaatattattgaatgatcaagatgttgttgaaa 22449281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 33049984 - 33050065
Alignment:
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgttgctatgaaatgatga 222  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |||||||| ||||    
T  33049984 atttaacgattaaatgcattacttgaattattcttgaataaactagatgttgatgaaatggattgttattatgaaattatga 33050065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 20229073 - 20229170
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  20229073 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 20229170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 198
Target Start/End: Original strand, 24782957 - 24783115
Alignment:
Q  40 tgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttgtaatgt 139  Q
    ||||||||||||||||||||| ||| ||  || |||  |||| ||||||||||| | | ||  ||||||| ||||| ||| || |||||  || ||||||    
T  24782957 tgaattgattaggaatggaactttaagttatagtgagacctacttaagatgttaactgaaaattgtgaagctgttatgaaatgctaagtgattataatgt 24783056  T
Q  140 gatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    ||||||  |||||| |||||||||||||||||| |||||| | | ||| ||||||||||    
T  24783057 gatttattaattaattgcattacttgaattattattgaatgatcaagaagttgttgaaa 24783115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 33797459 - 33797362
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||| | ||| |||| |||||| | | |||||||||||||||||||||||    
T  33797459 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattaatcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 33797362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 3472804 - 3472939
Alignment:
Q  62 ttaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcatt 160  Q
    |||||||||||||   |||||| |||||||||   ||||||||||||| ||||| ||| || ||||||||| | ||||||||||||  |||||||| |||    
T  3472804 ttaggtagtaatgtgacctatt-aagatgttaatgggaatctgtgaagctgttatgaaatgctaagttgtttgaaatgtgatttaatgattaaatgaatt 3472902  T
Q  161 acttgaattattcttgaataaactagatgttgttgaa 197  Q
    ||||||| |||| |||||| | | |||||||||||||    
T  3472903 acttgaaatattgttgaatgatcaagatgttgttgaa 3472939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 21022922 - 21022768
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaaga 118  Q
    |||||||||| ||| ||||  ||| ||||||| | ||||| | |||||||||||||   ||||| |||||||||| | | ||||||||||| | ||| ||    
T  21022922 aatgtcgtgatctgtgttgcttgatttgattaaggatggacccttaggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctattatga 21022823  T
Q  119 actgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattatt 172  Q
    ||||||||| || || |||||||| ||||  ||||| ||||||||||||| ||||    
T  21022822 actgttaagctgattataatgtgaattaatgattaattgcattacttgaaatatt 21022768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 6152119 - 6151990
Alignment:
Q  39 atgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgttg-taat 137  Q
    |||||||||||||| |||||   |||||||||||||   ||||| || |||||||   | ||||||||||| ||||| ||| ||||||| ||||  ||||    
T  6152119 atgaattgattagggatggactcttaggtagtaatgtgacctatataggatgttaattgcaatctgtgaagctgttatgaaatgttaagctgtttataat 6152020  T
Q  138 gtgatttaacaattaaatgcattacttgaa 167  Q
    |||||||||  ||||| |||||||||||||    
T  6152019 gtgatttaatgattaattgcattacttgaa 6151990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 16080288 - 16080459
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || |||||||||||| ||||| ||||||| ||||||  |||||||||||  ||| | |  | |||||||| | ||| ||| || |||    
T  16080288 gacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagagattaactgagaactgtgaagcttttatgaaatgctaa 16080387  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| ||| || | | ||| ||||||||||    
T  16080388 gtgattataatgtgatttattgattgattgcattacttgaattattattggatgatcaagaagttgttgaaa 16080459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 36819153 - 36819323
Alignment:
Q  28 acctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaag 127  Q
    ||||||||||  || |||||||||||| ||||| ||||||| ||||||  |||||||||||| |||   |  | |||||||| | ||| ||| |||||||    
T  36819153 acctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagatattaaatgagaactgtgaagcttttatgaaatgttaag 36819252  T
Q  128 ttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    |  || || |||||||||   ||| | |||||| ||||||||||| |||||| | | ||| ||||||||||    
T  36819253 tgattatattgtgatttatttattgattgcatttcttgaattattattgaatgatcaagaagttgttgaaa 36819323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 1925393 - 1925462
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  1925393 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 1925462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 20924407 - 20924476
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  20924407 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 20924476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 18182039 - 18182143
Alignment:
Q  102 ctgtgaagttgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatg 200  Q
    |||||||| ||||| ||  || |||||||||  |||||||||| ||  ||||| ||||||||||||| |||| |||||| | | |||||||||||||||     
T  18182039 ctgtgaagctgttatgagatgctaagttgtttataatgtgattcaatgattaattgcattacttgaaatattattgaatgatcaagatgttgttgaaata 18182138  T
Q  201 aattg 205  Q
    |||||    
T  18182139 aattg 18182143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 42865071 - 42865200
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa-gttg-ttgtaatgtga 141  Q
    ||||||||  ||||| | || ||||||||||   ||||| |||||||||| | | ||||||||||| ||||| |||  ||||| |||| || ||||||||    
T  42865071 ttgattagagatggacccttgggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaaggttaatgttgattataatgtga 42865170  T
Q  142 tttaacaattaaatgcattacttgaattat 171  Q
    |||||  ||||| |||||||||||| ||||    
T  42865171 tttaatgattaattgcattacttgagttat 42865200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 422357 - 422571
Alignment:
Q  9 tgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaa 108  Q
    |||||||||  ||||  ||| ||||||||  || |||| ||||||||||||| ||||||||||||||| |||||||||||||||| |  |||||||||||    
T  422357 tgcttttgaggatgtaatgatctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactagaatctgtgaa 422456  T
Q  109 gttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||||||||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  422457 gttgttaagaactattaagttgtttgtaatgtgatttaacgactaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 422556  T
Q  208 gctatgaaatgatga 222  Q
    | |||||||| ||||    
T  422557 gttatgaaattatga 422571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 7745 - 7548
Alignment:
Q  26 tgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgtta 125  Q
    ||||||||||||  |  |||| ||||||||||||| ||||||||||||||| ||||| |||||||||| | |||||||||||||||||||||||||||||    
T  7745 tgacctgagttgcttagattggttaggaatggaaccttaggtagtaatgaaacctatataagatgttaactggaatctgtgaagttgttaagaactgtta 7646  T
Q  126 agttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgttgctatgaaatgatga 222  Q
    ||||| |||||||| |||||||| | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||    
T  7645 agttgtttgtaatgcgatttaacgaataaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaattatga 7548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 122; Significance: 9e-63; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 413868 - 414085
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||||||   |||| |||||  ||||||||||||  || |||| ||||||||||||| ||||||||||| ||| | ||| |||||||||| | ||||    
T  413868 gaactgaatgtaattgagaatgttatgacctgagttgcttggattggttaggaatggaaccttaggtagtaaagaaacatatataagatgttaactggaa 413967  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||     
T  413968 tctgtgaagttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaac 414067  T
Q  200 gaattgttgctatgaaat 217  Q
    ||||||||| ||||||||    
T  414068 gaattgttgttatgaaat 414085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 71239 - 71142
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||||||||||||| |||||||||||| |  ||||||||||||| || || |||| |||||| | | |||||||||||||||||||||||    
T  71239 tgttatgaactgttaagttgtttgtaatgtgattttatgattaaatgcattattttaaatattattgaatgatcaagatgttgttgaaatgaattgtt 71142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 71575 - 71509
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgtta 93  Q
    |||||||||||  || |||||||||||  ||||| ||||||| ||||||  ||||||||||||||||    
T  71575 gacctgagttgcttggattgattaggagaggaaccttaggtactaatgagacctatttaagatgtta 71509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 111; Significance: 3e-56; HSPs: 2)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 11667 - 11460
Alignment:
Q  2 aactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaat 101  Q
    |||||| |||||||||||||||||||||||||||||  || |||| ||||||||||||| ||| ||||||| ||| |||||||||||||||| | |||||    
T  11667 aactgagtgcttttgataatgtcgtgacctgagttgtttggattggttaggaatggaactttatgtagtaaggaaacctatttaagatgttaactggaat 11568  T
Q  102 ctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaat 199  Q
    ||||||||          ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  11567 ctgtgaag----------ctgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacttgatgttgttgaaaat 11478  T
Q  200 gaattgttgctatgaaat 217  Q
    ||||||||| ||||||||    
T  11477 gaattgttgttatgaaat 11460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 2325 - 2250
Alignment:
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaatgaattgttgctatgaaat 217  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  2325 ttaacgattaaatgcattacttgaattattcttgaataaacttgatgttgttgaaaatgaattgttgttatgaaat 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 3e-50; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 20856242 - 20856458
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||| | || ||||||||||||||| ||||||||||||||||||||  | |||||||||||   |||||| ||||||||||| |  |    
T  20856242 gaactgagtgcttttgagattgccgtgacctgagttgattgaattgattaggaatggaaattcaggtagtaatgtgacctattaaagatgttagctgaga 20856341  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
    ||||||||  ||||| ||| || |||| |||| ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  20856342 tctgtgaacctgttatgaattgctaagctgtttgtaatgtgatttaatgattaaatgcattacttgaattattcttgaataacctagatgttgttgaaaa 20856441  T
Q  199 tgaattgttgctatgaa 215  Q
    |||||||||| ||||||    
T  20856442 tgaattgttgttatgaa 20856458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16861144 - 16861360
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||  | ||||||||| |||||| | ||    
T  16861144 gaactgagtgcatttgagaatgtcgtgacctgagttgattgaatcgattaggaatggaactttaggtagtagtgagacatatttaagaggttagctgaaa 16861243  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||| | | ||||  |||||||||||||| ||||||||||||||||  ||||||| ||||||||||| |||| |||||| |   |||||||||||||||    
T  16861244 tctgtaaggctgtt-tgaactgttaagttgtttgtaatgtgatttaatgattaaatacattacttgaaatattattgaatgattaagatgttgttgaaat 16861342  T
Q  200 gaattgttgctatgaaat 217  Q
    ||||||||| ||||||||    
T  16861343 gaattgttgttatgaaat 16861360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22010496 - 22010707
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||  |||| ||||| |||||||||||||  ||||||||||||||||||||| |||||||||| | |  | |||||||||||||| | | ||    
T  22010496 gaactgagtgcaattgagaatgttgtgacctgagttgcttgaattgattaggaatggaactttaggtagtagtaagacatatttaagatgttaactgaaa 22010595  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||||| ||||||  |||||| ||||||||| ||||||||||||||  ||||||||||||||||||| ||||||||||| | |||||   |||||||||    
T  22010596 tctgtgaggttgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattcttgaatgatctaga---tgttgaaat 22010691  T
Q  200 gaattgttgctatgaa 215  Q
    ||||||||| ||||||    
T  22010692 gaattgttgttatgaa 22010707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 17926565 - 17926728
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtg 140  Q
    |||||||||||  |||| | |||||||||||||   ||||||||||||||||   | ||||||||||| ||||  |||||| ||||||||| ||||||||    
T  17926565 aattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaattgaaatctgtgaagctgttt-gaactgctaagttgtttgtaatgtg 17926663  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  17926664 atttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 17926728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 30643149 - 30643314
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaa-gttgttaagaactgttaagttg-ttgtaatgt 139  Q
    |||||||||||  |||| | |||||||||||||   |||||||||||||||| | | |||||||||| | ||||| |||||||||||||| || |||| |    
T  30643149 aattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgcaatctgtgaaagctgttacgaactgttaagttgattataatat 30643248  T
Q  140 gatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||  ||||| ||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  30643249 gatttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 30643314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 15602877 - 15603037
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgt-tgtaatgtgat 142  Q
    |||||||||  |||| | ||| |||||||||   |||||||||||||||| | | ||||||||||| ||||   ||||| |||||||| |||||||||||    
T  15602877 ttgattagggttggacccttaagtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgtttgaaactgctaagttgtctgtaatgtgat 15602976  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaat 203  Q
    ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||    
T  15602977 ttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaat 15603037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 205
Target Start/End: Original strand, 20465874 - 20466061
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaaga 118  Q
    |||||||||  ||| ||||  ||||||||||||| | ||| | |||||||||||||   ||||| ||||| |||| | | ||||||||||| ||||| ||    
T  20465874 aatgtcgtgttctgtgttgcttgaattgattagggacggacccttaggtagtaatgtgacctatataagaggttaactgcaatctgtgaagctgttatga 20465973  T
Q  119 actgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    | || ||||||| || |||||||||||||  ||||| ||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  20465974 aatgctaagttgattataatgtgatttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 20466061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 39094759 - 39094949
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||||||| | |||||||||||   |||||||||||||||| | |  |    
T  39094759 gaactgagtgcttttgagaatgtcgtgacctgagttgaatgaattgagtagaaatggaacttaaggtagtaatgtgacctatttaagatgttaactgaga 39094858  T
Q  101 tctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaat 199  Q
    | ||| |||||||                 ||||||||| ||||||  |||||||||||||||||| |||||||||||||| || |||||||||| ||||    
T  39094859 tttgttaagttgt-----------------ttgtaatgtaatttaatgattaaatgcattacttgatttattcttgaataaccttgatgttgttgaaaat 39094941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 15611329 - 15611491
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgt-tgtaatgtgat 142  Q
    |||||||||  |||| | ||| |||||||||   |||||||||||||||| | | ||||||||||| ||||   ||||  |||||||| |||||||||||    
T  15611329 ttgattagggttggacccttaagtagtaatgtgacctatttaagatgttaactgaaatctgtgaagctgtttgaaactactaagttgtctgtaatgtgat 15611428  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  15611429 ttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 15611491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 16410113 - 16410276
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtg 140  Q
    |||||||||||  |||| | |||||||||||||   |||||||||||| ||| | | ||| ||||| | ||||  |||||| ||||||||| ||||||||    
T  16410113 aattgattagggttggacccttaggtagtaatgtgacctatttaagatattaactgaaatatgtgaggctgttt-gaactgctaagttgtttgtaatgtg 16410211  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  16410212 atttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 16410276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 377580 - 377414
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||  ||| |||||||||| ||| ||||  ||||||||||||| ||||| | |||||||||||||   ||||| |||||||||| | | ||    
T  377580 gaactgagtgctaatgagaatgtcgtgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgtgacctatataagatgttaactgcaa 377481  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttga 166  Q
    ||||||||| ||||| ||| ||||||| || |  |||||||||||||  ||||| ||||||||||||    
T  377480 tctgtgaagctgttatgaaatgttaagctgatcataatgtgatttaatgattaattgcattacttga 377414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 14398037 - 14398134
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | || ||||||||||||||||||||    
T  14398037 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagttgttgttgaaatgaattgtt 14398134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 19259443 - 19259565
Alignment:
Q  45 tgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatt 143  Q
    |||||||| ||||| | |||||||||||||   |||||  ||||||||| | | ||||||||||| | ||| |||||||||||||| || ||||||||||    
T  19259443 tgattagggatggacccttaggtagtaatgtgacctatacaagatgttaactgcaatctgtgaagctattatgaactgttaagttgattataatgtgatt 19259542  T
Q  144 taacaattaaatgcattacttga 166  Q
    |||  ||||| | ||||||||||    
T  19259543 taatgattaatttcattacttga 19259565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 167
Target Start/End: Complemental strand, 24755959 - 24755856
Alignment:
Q  65 ggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattact 163  Q
    ||||||||||   ||||| || ||||||| | | ||||||||||| ||||| ||| |||||||||| || |||||||||||||  ||||| |||||||||    
T  24755959 ggtagtaatgtgacctatataggatgttaactgcaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcattact 24755860  T
Q  164 tgaa 167  Q
    ||||    
T  24755859 tgaa 24755856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 21410792 - 21410723
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  21410792 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 21410723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 21805284 - 21805215
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  21805284 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 21805215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 21828278 - 21828347
Alignment:
Q  111 tgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| |||||||||  |||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  21828278 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 21828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 192142 - 192342
Alignment:
Q  9 tgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaa 108  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||| |  ||||||||||   |||||||||||||||| | |  |||||||||    
T  192142 tgcttttgagaatgtcgtgacctgagttgaatgatttgagtaggaatggaacttagggtagtaatgtgacctatttaagatgttaactgagatctgtgaa 192241  T
Q  109 gttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaatgaattgt 206  Q
    ||||||| ||| | ||||| || ||||||||||||||||  |||||||||||||||||| |||||||||||| | || |||||||||| |||||||||||    
T  192242 gttgttatgaatttttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaattaccttgatgttgttgaaaatgaattgt 192341  T
Q  207 t 207  Q
    |    
T  192342 t 192342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 2261 - 2476
Alignment:
Q  9 tgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaa 108  Q
    |||||| || |||||  ||||||||||||  ||||||| |||||||||| || ||||||||||||||| ||||| | |||||||| | ||||||||||||    
T  2261 tgctttagagaatgttatgacctgagttgtttgaattggttaggaatgggactttaggtagtaatgaaacctatcttagatgttaactggaatctgtgaa 2360  T
Q  109 gttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataa-actagatgttgttgaaatgaattgt 206  Q
    | ||||| ||| ||||||| || ||||||||||||||||  ||||||| |||||||||| ||||||||||||||  || |||||||||||| ||||||||    
T  2361 gctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatacattacttgatttattcttgaataatccttgatgttgttgaattgaattgt 2460  T
Q  207 tgctatgaaatgatga 222  Q
    || |||||||| ||||    
T  2461 tgttatgaaattatga 2476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 10121 - 10336
Alignment:
Q  9 tgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaa 108  Q
    |||||| || |||||  ||||||||||||  ||||||| |||||||||| || ||||||||||||||| ||||| | |||||||| | ||||||||||||    
T  10121 tgctttagagaatgttatgacctgagttgtttgaattggttaggaatgggactttaggtagtaatgaaacctatcttagatgttaactggaatctgtgaa 10220  T
Q  109 gttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataa-actagatgttgttgaaatgaattgt 206  Q
    | ||||| ||| ||||||| || ||||||||||||||||  ||||||| |||||||||| ||||||||||||||  || |||||||||||| ||||||||    
T  10221 gctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatacattacttgatttattcttgaataatccttgatgttgttgaattgaattgt 10320  T
Q  207 tgctatgaaatgatga 222  Q
    || |||||||| ||||    
T  10321 tgttatgaaattatga 10336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 35328 - 35546
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||| |||| ||||||||||||||||||| |||| |||||||||| | ||| |||||||||   ||||||| |||||||| | |  |    
T  35328 gaactgagtgcttttgagaatgacgtgacctgagttgaatgagttgagtaggaatggagctttatgtagtaatgtgacctatttgagatgttaactgaga 35427  T
Q  101 tctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaa 198  Q
     |||||||| ||||| ||| | ||||| |||| ||||||||||||||  |||||||||||||||||| |||||||||||||| || |||||||||| |||    
T  35428 cctgtgaagctgttatgaattattaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaataaccttgatgttgttgaaaa 35527  T
Q  199 tgaattgttgctatgaaat 217  Q
    |||||||||| ||||||||    
T  35528 tgaattgttgttatgaaat 35546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19109 - 19314
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  ||||| ||||||||||   | ||    
T  19109 gaactgagtgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaa 19208  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||||||| ||||| ||||| ||||| || || | ||||||||||   ||||| ||||||||||||  |||| |||||||| | |||||||||||||||    
T  19209 tctgtgaagctgttatgaactattaagctgattatgatgtgatttattgattaattgcattacttgagatattattgaataatcaagatgttgttgaaat 19308  T
Q  200 gaattg 205  Q
    ||||||    
T  19309 gaattg 19314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 30562 - 30776
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| ||||| |||||||||||||  ||||||||||||||||||||| |||||||||  |||  |||||||||||||||| | | ||    
T  30562 gaactgagtgcatttgagaatgttgtgacctgagttgcttgaattgattaggaatggaactttaggtagttgtgagacctatttaagatgttaactgaaa 30661  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||| ||||||||  |||||  ||||||| ||||||||||||||||  ||||||||||||||||||| |||| |||||| |   |||||| ||||||||    
T  30662 tctgtaaagttgtt-tgaacttctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaatgataaagatgtagttgaaat 30760  T
Q  200 gaattgttgctatgaa 215  Q
    ||||||||| ||||||    
T  30761 gaattgttgttatgaa 30776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 4042 - 4240
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||||||||| | || |||||| |||||||| ||||||||||||||||||||| |||||||||||||   |||||||||||||||| | |  |    
T  4042 gaactgagtgcttttgagattgccgtgacttgagttgattgaattgattaggaatggaactttaggtagtaatgtgacctatttaagatgttaactgaga 4141  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    | ||||||  ||||| ||| ||||||| || ||||||||||||||||  |||||||||||||||||| |||||||||||||| || || ||||||||||    
T  4142 tatgtgaatctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaataaccttgaagttgttgaaa 4240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 7088 - 7305
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| |||||||||||||||||| ||||||||||  || |||| ||||||||||||| |||||||||| |     |||| | |||||||| | |  |    
T  7088 gaactgagtgcttttgataatgtcgtaacctgagttgtttggattgtttaggaatggaactttaggtagtattatgatctatgtgagatgttaactgaga 7187  T
Q  101 tctgtgaagttgttaagaactgttaagttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttg-aaat 199  Q
    ||||||| | ||||| |||  |||||  ||||||||||||||||||  |||||||||||||||||| ||||||||||||||  | |||||||||| ||||    
T  7188 tctgtgaggctgttatgaaaagttaaactgttgtaatgtgatttaaagattaaatgcattacttgatttattcttgaataactttgatgttgttgaaaat 7287  T
Q  200 gaattgttgctatgaaat 217  Q
    |||||||||  |||||||    
T  7288 gaattgttgtgatgaaat 7305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 2090 - 1876
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| ||||||||| || ||||||| |||||| ||||||||||||||||||||||||| |||  ||||| ||||||||||   | ||    
T  2090 gaactgagtgcatttgagaatgtcgtgccccgagttgattgaatttattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaa 1991  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    | ||||| | ||||  |||||| ||||||| ||||||||||||||||  ||||||||||||||||||| |||| |||||| |    |||||| |||||||    
T  1990 tatgtgaggctgtt-tgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaatgataacgatgttattgaaat 1892  T
Q  200 gaattgttgctatgaa 215  Q
    ||||||| | ||||||    
T  1891 gaattgtggttatgaa 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 619 - 493
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  ||||| ||||||||||   | ||    
T  619 gaactgagtgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaa 520  T
Q  101 tctgtgaagttgttaagaactgttaag 127  Q
    ||||||||||||||| ||||| |||||    
T  519 tctgtgaagttgttatgaactattaag 493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 215
Target Start/End: Original strand, 1333 - 1522
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || ||||| |||||||||||| |||| ||||||||   |||||||||||||||| | |  |||||||||| ||||| ||| ||||||    
T  1333 gacctgagttgcttggattgactaggaatggaactttagttagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaattgttaa 1432  T
Q  127 gttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgttgctatgaa 215  Q
    | || || |||||||| ||||| | ||| ||||||||||||| |||| |||||| | | |||||||||||||||||||||||| ||||||    
T  1433 gctgattataatgtgacttaacgaataattgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattgttgttatgaa 1522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 15385 - 15180
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| |||||  ||||||||||||  | |||||||| |||||||||| |||||||||| |||  ||| | |||||||||| | | ||    
T  15385 gaactgagtgcatttgagaatgttttgacctgagttgctttaattgatttggaatggaactttaggtagtagtgagacctttataagatgttaactgcaa 15286  T
Q  101 tctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaat 199  Q
    ||||||||| |||||  ||  ||||||||| || |||||||||||||  ||||| ||||||||||||| |||| |||||| | | |||||||||||||||    
T  15285 tctgtgaagctgttataaaaagttaagttgattataatgtgatttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgttgaaat 15186  T
Q  200 gaattg 205  Q
    ||||||    
T  15185 gaattg 15180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 45406 - 45280
Alignment:
Q  1 gaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaa 100  Q
    ||||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||  ||||| ||||||||||   | ||    
T  45406 gaactgagtgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaacaataggtagtagtgagacctatataagatgttaaatgaaa 45307  T
Q  101 tctgtgaagttgttaagaactgttaag 127  Q
    ||||||||||||||| ||||| |||||    
T  45306 tctgtgaagttgttatgaactattaag 45280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 36210 - 36273
Alignment:
Q  117 gaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  36210 gaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 36273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 198
Target Start/End: Complemental strand, 418 - 261
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    ||||||||||| ||||| | |||||||||||||   |||| ||||||||||| | | ||||||||||| ||||| |||||||||||||| || |||||||    
T  418 aattgattagggatggacccttaggtagtaatgtgacctaattaagatgttaacggaaatctgtgaagctgttatgaactgttaagttgattataatgtg 319  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    ||||||  | ||| ||||||||||||| |||| |||||| | | ||||||||||||||    
T  318 atttaatgactaattgcattacttgaaatattattgaatgatcaagatgttgttgaaa 261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 1154 - 991
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtg 140  Q
    |||||||||||  |||| | ||| |||||||||   |||||||||||||||| | | ||||||||| | ||||  || ||| ||||||||| ||||||||    
T  1154 aattgattagggttggacccttaagtagtaatgtgacctatttaagatgttaactgaaatctgtgaggctgttt-gacctgctaagttgtttgtaatgtg 1056  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||| ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  1055 atttaacgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 2051 - 1924
Alignment:
Q  78 cctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttg 176  Q
    |||||||||||||||| ||| ||||||||||  ||||  |||||| ||||||||| ||||||||||||||  ||||||||||||||||||| |||| |||    
T  2051 cctatttaagatgttaaccgaaatctgtgaaactgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattg 1953  T
Q  177 aataaactagatgttgttgaaatgaattg 205  Q
    ||| | | |||||||||||||||||||||    
T  1952 aatgatcaagatgttgttgaaatgaattg 1924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 9733 - 9606
Alignment:
Q  78 cctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttg 176  Q
    |||||||||||||||| ||| ||||||||||  ||||  |||||| ||||||||| ||||||||||||||  ||||||||||||||||||| |||| |||    
T  9733 cctatttaagatgttaaccgaaatctgtgaaactgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattg 9635  T
Q  177 aataaactagatgttgttgaaatgaattg 205  Q
    ||| | | |||||||||||||||||||||    
T  9634 aatgatcaagatgttgttgaaatgaattg 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 21427 - 21591
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    ||||||||||| ||||| | |||||||||||||   |||||||||||||||| | | ||| ||||||| || || ||||||||||| || || |||||||    
T  21427 aattgattagggatggacccttaggtagtaatgtgacctatttaagatgttaactgaaatttgtgaagctgctatgaactgttaagctgattataatgtg 21526  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| || |||||||||| |||| |||||| | | |||||||||||||||||||||    
T  21527 atttaatgattaattgtattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 21591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 80618 - 80715
Alignment:
Q  111 tgttaagaactgttaagttgt-tgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| |||||||| |||||||||||||||  |||||||||||| || ||| |||| |||||| | | |||||||||||||||||||||||    
T  80618 tgttatgaactgctaagttgtctgtaatgtgatttaatgattaaatgcattgctcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 80715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 1751 - 1587
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    |||||||||||  |||| | |||||||||||||   |||||||||||||||| | |  |||||||||| || || ||||||||||| || || |||||||    
T  1751 aattgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgctatgaactgttaagctgattataatgtg 1652  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| ||||||||||||| |||| |||||| | | |||||||| ||||||||||||    
T  1651 atttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 6276 - 6437
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgat 142  Q
    |||||||||  |||| | |||||||||||||   |||||||||||||||| | | ||| ||||||| ||||  |||||| ||| ||||| ||||||||||    
T  6276 ttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatatgtgaagctgttt-gaactgctaacttgtttgtaatgtgat 6374  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||    
T  6375 ttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattg 6437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 44 - 205
Target Start/End: Complemental strand, 44336 - 44175
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttgtt-gtaatgtgat 142  Q
    |||||||||  |||| | |||||||||||||   |||||||||||||||| | | ||||||||||| | || | ||||| ||||||||| ||||||||||    
T  44336 ttgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagcttttta-aactgctaagttgtttgtaatgtgat 44238  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  |||||||||||||||| || |||| |||||| | | ||||||||| |||||||||||    
T  44237 ttaatgattaaatgcattacttaaaatattattgaattatcaagatgttgtggaaatgaattg 44175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 46585 - 46749
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    ||||||||||| |||||   |||||||||||||   ||||| ||||| |||| | | ||||||||||| ||||| ||| || ||||||| || |||||||    
T  46585 aattgattagggatggactcttaggtagtaatgtgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgctaagttgattataatgtg 46684  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| ||||||||||||| |||| |||||| | | ||||||||| |||||||||||    
T  46685 atttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgtggaaatgaattg 46749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 15057 - 15225
Alignment:
Q  31 tgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg 130  Q
    |||| ||||||||| || |||||||||||| |  ||||||||||   |||| ||||||||||| | |  |||||||||| ||||| ||| || ||||  |    
T  15057 tgagctgaatgaatcgagtaggaatggaacttagggtagtaatgtgacctacttaagatgttaactgagatctgtgaagctgttatgaattgctaagcag 15156  T
Q  131 tt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    || ||||||||||||||  ||||||||||||||| |  |||||||||||||| || |||||||||||||    
T  15157 tttgtaatgtgatttaatgattaaatgcattactgggtttattcttgaataaccttgatgttgttgaaa 15225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 19579 - 19747
Alignment:
Q  31 tgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg 130  Q
    |||| ||||||||| || |||||||||||| |  ||||||||||   |||| ||||||||||| | |  |||||||||| ||||| ||| || ||||  |    
T  19579 tgagctgaatgaatcgagtaggaatggaacttagggtagtaatgtgacctacttaagatgttaactgagatctgtgaagctgttatgaattgctaagcag 19678  T
Q  131 tt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    || ||||||||||||||  ||||||||||||||| |  |||||||||||||| || |||||||||||||    
T  19679 tttgtaatgtgatttaatgattaaatgcattactgggtttattcttgaataaccttgatgttgttgaaa 19747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 4711 - 4524
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaaga 118  Q
    ||||| |||| ||| ||||  ||||||||||||||||||||| |||||||||| |||  ||||| ||||| |||| | | || |||||||  | ||| ||    
T  4711 aatgttgtgaactgtgttgtttgaattgattaggaatggaactttaggtagtagtgagacctatataagaagttaactgtaaactgtgaaactattatga 4612  T
Q  119 actgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    | || ||||||| || ||||||||||||   ||||| ||||||||||||| |||| | |||| | | |||||||||||||||||||||    
T  4611 aatgctaagttgattataatgtgatttattgattaattgcattacttgaaatattatcgaatgatcaagatgttgttgaaatgaattg 4524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 42860 - 42729
Alignment:
Q  62 ttaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcatt 160  Q
    |||||||||||||   |||||||||||||||| | |  |||||||||| ||||| ||||||||||| || || |||||||||||||  ||||||||||||    
T  42860 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaactgttaagctgattctaatgtgatttaatgattaaatgcatt 42761  T
Q  161 acttgaattattcttgaataaactagatgttg 192  Q
    ||||||| |||| |||||| | | ||||||||    
T  42760 acttgaaatattattgaatgatcaagatgttg 42729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 31061 - 30964
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||||||||||||||||    
T  31061 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 30964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 18514 - 18678
Alignment:
Q  42 aattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtg 140  Q
    |||||||| || ||||| | ||||||||||||||  ||||| ||||| |||| | | ||||||||||| ||||| ||| || || |||| || |||||||    
T  18514 aattgatttgggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgaaatggtatgttgattataatgtg 18613  T
Q  141 atttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||  ||||| | ||||||||||| |||| |||||| | | |||||||||||||| ||||||    
T  18614 atttaatgattaattccattacttgaaatattattgaatgatcaagatgttgttgaaacgaattg 18678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 205
Target Start/End: Complemental strand, 649 - 487
Alignment:
Q  44 ttgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgat 142  Q
    |||||| || ||||| | |||||||||||||   ||||||||||||||||   |  |||||||||| |  || ||||||||||| || || |||||||||    
T  649 ttgatttgggatggacccttaggtagtaatgcgacctatttaagatgttaattgagatctgtgaagctactatgaactgttaagctgattataatgtgat 550  T
Q  143 ttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||  ||||||||||||||||||| |||| |||||| | | |||||| ||||||| ||||||    
T  549 ttaatgattaaatgcattacttgaaatattattgaatgatcaagatgtcgttgaaaagaattg 487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 6857 - 6760
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| | |||| | | |||||||||||||||||||||||    
T  6857 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattatagaatgatcaagatgttgttgaaatgaattgtt 6760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 20393 - 20490
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||  ||| |||| |||||||| | |||||||| ||||||||||||||    
T  20393 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacacgaaatattattgaataatcaagatgttgatgaaatgaattgtt 20490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 80974 - 80794
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    ||||||||| |  ||||| ||||||||||||||| ||||||| ||||||  ||||| |||||||||| | |  || ||||||| |||   ||| || |||    
T  80974 gacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctgtattgaaatgctaa 80875  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||  || ||||||||||||  |||| | |||||||||||||||||| |||||| | |  || | |||||||||||||||||    
T  80874 gtgtttataatgtgatttattaattgattgcattacttgaattattattgaatgatcaggaagatgttgaaatgaattgtt 80794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 80557 - 80460
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattgtt 207  Q
    ||||| |||||  ||||||||| ||||||||||||||  ||||||||||||||| ||| |||| |||||| | | |||||||||| ||||||||||||    
T  80557 tgttatgaactactaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttaaaatgaattgtt 80460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 66259 - 66438
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || |||||||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| || |||    
T  66259 gacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 66358  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaa-atgaattg 205  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| |||||| | | ||| ||||||||| ||||||||    
T  66359 gtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaagaagttgttgaagatgaattg 66438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 53827 - 53648
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || |||||||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |  | |||||||| | ||| ||| || |||    
T  53827 gacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 53728  T
Q  127 gttgttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaa-atgaattg 205  Q
    ||  || ||||||||||||   ||| | |||||||||||||||||| |||||| | | ||| ||||||||| ||||||||    
T  53727 gtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaagaagttgttgaagatgaattg 53648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 36350 - 36419
Alignment:
Q  111 tgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| |||||||||  |||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  36350 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 36419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 205
Target Start/End: Original strand, 1939 - 2107
Alignment:
Q  39 atgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaac-tgttaagttgtt-gtaa 136  Q
    |||||| |||||||  |||| | |||||||||||||   |||||||||||| ||| | | ||| ||||||| ||||| |||  || ||||||||| ||||    
T  1939 atgaatcgattagggttggacccttaggtagtaatgtgacctatttaagatattaactgaaatatgtgaagctgttatgaaaatgctaagttgtttgtaa 2038  T
Q  137 tgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||| ||||||  ||||||||||||||||||| | |  |||||| | | |||||||||||||||| ||||    
T  2039 tgtaatttaatgattaaatgcattacttgaaatttcattgaatgatcaagatgttgttgaaatggattg 2107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 5858 - 5687
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || ||||||||||||||| || |||||||||||||   |||| ||||||||||| | |  |||| ||||| ||||| ||| ||||||    
T  5858 gacctgagttgcttggattgattaggaatgggactttaggtagtaatgtgaccta-ttaagatgttaactgagatctttgaagctgttatgaattgttaa 5760  T
Q  127 gttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    | || || |||||||||| ||  | ||| ||||||||||||  |||| |||||| | | ||||||||||||||    
T  5759 gctgattataatgtgattaaatgaataattgcattacttgagatattattgaatgatcaagatgttgttgaaa 5687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 7053 - 6882
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    |||||||||||  || ||||||||||||||| || |||||||||||||   |||| ||||||||||| | |  |||| ||||| ||||| ||| ||||||    
T  7053 gacctgagttgcttggattgattaggaatgggactttaggtagtaatgtgaccta-ttaagatgttaactgagatctttgaagctgttatgaattgttaa 6955  T
Q  127 gttg-ttgtaatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaa 198  Q
    | || || |||||||||| ||  | ||| ||||||||||||  |||| |||||| | | ||||||||||||||    
T  6954 gctgattataatgtgattaaatgaataattgcattacttgagatattattgaatgatcaagatgttgttgaaa 6882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 552 - 452
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaa 126  Q
    ||||| |||||  |||||||||||||||||| || |||||||||||||   |||||||||||||||| | |  |||||||||| ||||| ||| ||||||    
T  552 gacctcagttgcttgaattgattaggaatgggactttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaattgttaa 453  T
Q  127 g 127  Q
    |    
T  452 g 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 6224 - 6331
Alignment:
Q  99 aatctgtgaagttgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaa 197  Q
    ||||||||||| | ||| ||| ||||||||||||  || ||||||||||  ||||| ||||||||||||| |||| |||||| | | ||| |||||||||    
T  6224 aatctgtgaagctattatgaaatgttaagttgtttatattgtgatttaattattaattgcattacttgaaatattattgaatgatcaagaagttgttgaa 6323  T
Q  198 atgaattg 205  Q
    ||||||||    
T  6324 atgaattg 6331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 9994 - 10065
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||| ||||  ||||||||||||||||||| |||| |||||| | | |||||||||||||||||||||    
T  9994 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 10065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 167
Target Start/End: Original strand, 34791 - 34894
Alignment:
Q  65 ggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattact 163  Q
    ||||||||||   ||||| |||||||||| | | ||||||||||| ||||| ||| |||||||||| || |||||||||||||  ||||| |||||||||    
T  34791 ggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaattgttaagttgattataatgtgatttaatgattaattgcattact 34890  T
Q  164 tgaa 167  Q
    ||||    
T  34891 tgaa 34894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 16950 - 17008
Alignment:
Q  13 tttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagta 71  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  16950 tttgagaatgccgtgacctgagttgcttgaattgattaggaatggaactttaggtagta 17008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 17062 - 17134
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgtt-gaaatgaattg 205  Q
    |||||||||||||  ||||| ||||||||||||| |||| ||||||   | |||||||||| |||||||||||    
T  17062 taatgtgatttaatgattaattgcattacttgaaatattattgaatgttcaagatgttgttggaaatgaattg 17134  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 207766 - 207835
Alignment:
Q  111 tgttaagaactgttaagttgtt-gtaatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| ||||||||||||||  ||||||||||||||||||| |||| ||||||    
T  207766 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaat 207835  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 166
Target Start/End: Original strand, 6933 - 7061
Alignment:
Q  39 atgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaat 137  Q
    |||| ||||||||| ||||  | |||||||||||||   ||||| |||||||||| | | ||||||||||| ||||| ||| ||||||| || || ||||    
T  6933 atgagttgattagggatgggcccttaggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctgttatgaaatgttaagctgattataat 7032  T
Q  138 gtgatttaacaattaaatgcattacttga 166  Q
    | |||||||  ||||| ||||||||||||    
T  7033 gagatttaatgattaattgcattacttga 7061  T

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Target: scaffold1052 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 3070 - 2999
Alignment:
Q  134 taatgtgatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||| ||||  ||||||||||||||||||| |||| |||||| | | ||||||||||||||| |||||    
T  3070 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaattaattg 2999  T

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Target: scaffold0210 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 21641 - 21737
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgtta 115  Q
    ||||| |||| ||| ||||  ||||||| ||||| ||||| | ||||||||||||||  ||||| |||||||||| | | ||||||||||| |||||    
T  21641 aatgttgtgatctgtgttgcttgaattggttagggatggacccttaggtagtaatgagacctatataagatgttaactgcaatctgtgaagctgtta 21737  T

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Target: scaffold0210; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 29533 - 29629
Alignment:
Q  19 aatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaagttgtta 115  Q
    ||||| |||| ||| ||||  ||||||| ||||| ||||| | ||||||||||||||  ||||| |||||||||| | | ||||||||||| |||||    
T  29533 aatgttgtgatctgtgttgcttgaattggttagggatggacccttaggtagtaatgagacctatataagatgttaactgcaatctgtgaagctgtta 29629  T

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Target: scaffold0405 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 9509 - 9571
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagat 89  Q
    |||||||||||  || |||||||||||| ||||| ||||||| ||||||  ||||||||||||    
T  9509 gacctgagttgtttggattgattaggaaaggaaccttaggtactaatgagacctatttaagat 9571  T

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Target: scaffold0349 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 12684 - 12618
Alignment:
Q  27 gacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgtta 93  Q
    ||||||||| |  ||||| ||||||||||||||| ||||||| ||||||  ||||| ||||||||||    
T  12684 gacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaagatgtta 12618  T

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Target: scaffold0185 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 33692 - 33642
Alignment:
Q  155 tgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    ||||||||||||  |||| |||||||| | |||||||||||||||||||||    
T  33692 tgcattacttgagatattattgaataatcaagatgttgttgaaatgaattg 33642  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 13971 - 14061
Alignment:
Q  78 cctatttaagatgttagccggaatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaa 167  Q
    ||||| || ||||||| | | ||||||||||| ||||| ||| |||||||||| || |||||||||||||  ||||| || ||||||||||    
T  13971 cctatataggatgttaactgaaatctgtgaagctgttatgaaatgttaagttgattataatgtgatttaatgattaattgaattacttgaa 14061  T

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Target: scaffold1124 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 2139 - 2070
Alignment:
Q  40 tgaattgattaggaatggaacattaggtagtaatgaagcctatttaagatgttagccggaatctgtgaag 109  Q
    ||||||||||||| ||||| | ||||||||||||||  ||||| ||||| |||| | | |||||||||||    
T  2139 tgaattgattagggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaag 2070  T

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Target: scaffold0158 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 3043 - 2974
Alignment:
Q  99 aatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaa 167  Q
    ||||||||||| ||||| ||| ||||||| || || |||||||||||||  ||||| |||||||||||||    
T  3043 aatctgtgaagctgttatgaaatgttaagctgattataatgtgatttaatgattaattgcattacttgaa 2974  T

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Target: scaffold0158; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 6709 - 6640
Alignment:
Q  99 aatctgtgaagttgttaagaactgttaagttg-ttgtaatgtgatttaacaattaaatgcattacttgaa 167  Q
    ||||||||||| ||||| ||| ||||||| || || |||||||||||||  ||||| |||||||||||||    
T  6709 aatctgtgaagctgttatgaaatgttaagctgattataatgtgatttaatgattaattgcattacttgaa 6640  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 32924 - 32993
Alignment:
Q  111 tgttaagaactgttaagttgttgt-aatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| ||||||||| | ||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  32924 tgttatgaactgctaagttgtttttaatgtgatttaatgattaaatgcattactcgaaatattattgaat 32993  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 14351 - 14420
Alignment:
Q  111 tgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| |||||||||  |||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  14351 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 14420  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 73725 - 73790
Alignment:
Q  140 gatttaacaattaaatgcattacttgaattattcttgaataaactagatgttgttgaaatgaattg 205  Q
    |||||||  ||||| ||||||||||||| |||| |||||| | | |||||||| ||||||||||||    
T  73725 gatttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 73790  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 189641 - 189710
Alignment:
Q  111 tgttaagaactgttaagttgttg-taatgtgatttaacaattaaatgcattacttgaattattcttgaat 179  Q
    ||||| |||||| |||||||||  |||||||||||||  ||||||||||||||| ||| |||| ||||||    
T  189641 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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