View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0650_low_9 (Length: 251)
Name: NF0650_low_9
Description: NF0650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0650_low_9 |
 |  |
|
[»] scaffold0001 (1 HSPs) |
 |  |  |
|
[»] scaffold0264 (1 HSPs) |
 |  |  |
|
[»] scaffold0207 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0001 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 135249 - 135467
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
135249 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
135348 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
135349 |
ccagatactttggacagtttcgcttccaatgcccagcgttgttgcaatagaagcacttaccatccttagccacgcctccagtaggcttcaaagctttggt |
135448 |
T |
 |
Q |
222 |
tgatggcttggcaacagct |
240 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
135449 |
tgatggcttggcaacagct |
135467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 27011133 - 27011351
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
27011133 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
27011232 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
27011233 |
ccagatactttggacagtttcgcttccaatgcccagcgttgttgcaatagaagcacttaccatccttagccacgcctccagtaggcttcaaagctttggt |
27011332 |
T |
 |
Q |
222 |
tgatggcttggcaacagct |
240 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
27011333 |
tgatggcttggcaacagct |
27011351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 21286492 - 21286651
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
21286492 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaatatttccattcttcttatctt |
21286591 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttac |
181 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
21286592 |
ccagatactttggacagtttcgcttccaatgcccagtgttgttgcagtagaagcacttac |
21286651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 22726866 - 22726789
Alignment:
Q |
160 |
ttgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagttgatggcttggcaaca |
237 |
Q |
|
|
||||||||| |||||||||| || |||||||| ||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
T |
22726866 |
ttgttgcagcagaagcacttgccctccttagcaacgcctccagtaggcttcaaagctttggttgatggcttggcaaca |
22726789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 18403774 - 18403556
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
18403774 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
18403675 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
18403674 |
ccagatactttggacagtttcgcttccaatgcccagcgttgttgcaatagaagcacttaccatccttagccacgcctccagtaggcttcaaagctttggt |
18403575 |
T |
 |
Q |
222 |
tgatggcttggcaacagct |
240 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
18403574 |
tgatggcttggcaacagct |
18403556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 19392125 - 19391922
Alignment:
Q |
24 |
tccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatcttcc |
123 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||| || |||| ||||||| |||||||||||| |
|
|
T |
19392125 |
tccagtatctaatacccatgatgtagaagtagacatattaatttatata--aaaaatatctgaagaagtagaagcaacagttccattattcttatcttcc |
19392028 |
T |
 |
Q |
124 |
agatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagttg |
223 |
Q |
|
|
||||| ||||| || ||||||||||||| | | || |||||||||||| || || ||||||||||| | || ||||||||||||||||| ||| |
|
|
T |
19392027 |
agatattttgggcagcttcgcttccaatgtctggttttaccgcagtagaagcaatttccctccttagccacacatcctgtaggcttcaaagctttgattg |
19391928 |
T |
 |
Q |
224 |
atggct |
229 |
Q |
|
|
|||||| |
|
|
T |
19391927 |
atggct |
19391922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 20935726 - 20935508
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
20935726 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
20935627 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
20935626 |
ccagatactttggacagtttcgcttccaatgcccagtgttgttgcagtagaagcacttgccatccttagccacgcctccagtaggcttcaaagctttggt |
20935527 |
T |
 |
Q |
222 |
tgatggcttggcaacagct |
240 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
20935526 |
tgatggcttggcaacagct |
20935508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 15458183 - 15457965
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
15458183 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
15458084 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
15458083 |
ccagatactttggacagtttcgcttccaatgcccagtgttgttgcaatagaagcacttaccatccttagccacgcctccagtaggcttcaaagctttggt |
15457984 |
T |
 |
Q |
222 |
tgatggcttggcaacagct |
240 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
15457983 |
tgatggcttggcaacagct |
15457965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 15818826 - 15818608
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
15818826 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
15818727 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
15818726 |
ccagatactttggacagtttcgcttccaatgcccagcgttgttgcaatagaagcacttaccatccttagccacgcctccagtaggcttcaaagctttggt |
15818627 |
T |
 |
Q |
222 |
tgatggcttggcaacagct |
240 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
15818626 |
tgatggcttggcaacagct |
15818608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 18114659 - 18114877
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
18114659 |
catccagtatctaatacccatgatgtagaagtagatatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
18114758 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
18114759 |
ccagatactttggacagtttcgcttccaatgcccagtgttgttgcaatagaagcacttaccatccttagccacgcctccagtaggcttcaaagctttggt |
18114858 |
T |
 |
Q |
222 |
tgatggcttggcaacagct |
240 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
18114859 |
tgatggcttggcaacagct |
18114877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 18159848 - 18159653
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
18159848 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaatatttccattcttcttatctt |
18159749 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctt |
217 |
Q |
|
|
|||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
18159748 |
ccagatactttggacagtttcgcttccaatgccctgtgttgttgcaatagaagcacttaccatccttagccacgcctctagtaggcttcaaagctt |
18159653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 12303645 - 12303427
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
12303645 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttgtctt |
12303546 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
12303545 |
ccagatactttggacagtttcgcttccaatgcccagtgttgttgcaatagaagcacttaccatccttagccacgcctccagtaggcttcaaagctttggt |
12303446 |
T |
 |
Q |
222 |
tgatggcttggcaacagct |
240 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
12303445 |
tgatggcttggcaacagct |
12303427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 1928914 - 1928967
Alignment:
Q |
29 |
tatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatac |
82 |
Q |
|
|
||||||||||||||||| ||||| |||| | |||||||||||||| || ||||| |
|
|
T |
1928914 |
tatctaatacccatgatatagaaatagataaattaatttctataagaataatac |
1928967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 22 - 235
Target Start/End: Original strand, 7291 - 7504
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
7291 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
7390 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
7391 |
acagatactttggacagtttcgcttccaatgcccagtgttgttgcaatagaagcacttaccatccttagccacgcctccagtaggcttcaaagctttggt |
7490 |
T |
 |
Q |
222 |
tgatggcttggcaa |
235 |
Q |
|
|
|||||||||||||| |
|
|
T |
7491 |
tgatggcttggcaa |
7504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 22 - 237
Target Start/End: Original strand, 27522101 - 27522316
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
27522101 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
27522200 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| |||||| |||||||||||||| |||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||| || |
|
|
T |
27522201 |
ccagatactttggatagtttcacttccaatgcccagcgttgttgcaatagaagcacttatcatccttagccacgcctccagtaggcttcaaagctttggt |
27522300 |
T |
 |
Q |
222 |
tgatggcttggcaaca |
237 |
Q |
|
|
|||||||||||||||| |
|
|
T |
27522301 |
tgatggcttggcaaca |
27522316 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 28138339 - 28138557
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28138339 |
catccagtatctaatacccatgatgtagaagtagacatattaatttctataaaaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
28138438 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||||||| |||||||||||||||||| || |
|
|
T |
28138439 |
ccagatactttggacagtttcgcttccaatgcccagtgttgttgaagtagaagcacttgccatccttacccacgcctccagtaggcttcaaagctttggt |
28138538 |
T |
 |
Q |
222 |
tgatggcttggcaacagct |
240 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
28138539 |
tgatggcttggcaacagct |
28138557 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0207 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: scaffold0207
Description:
Target: scaffold0207; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 29808 - 29593
Alignment:
Q |
22 |
catccaatatctaatacccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagtaggaacatttccattcttcttatctt |
121 |
Q |
|
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
29808 |
catccagtatctaatatccatgatgtagaagtagacatattaatttctataacaaaaatacctgcagaagtagttggaacatttccattcttcttatctt |
29709 |
T |
 |
Q |
122 |
ccagatactttggaaagtttcgcttccaatgcccagaattgttgcagtagaagcacttaccatccttagccacgcctctagtaggcttcaaagctttagt |
221 |
Q |
|
|
|||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||| || |
|
|
T |
29708 |
ccagatactttggacagtttcgcttccaatgccctgtattgttgcagtagaagcacttgccctccttagccacgcctccagtaggcttcaaagctttggt |
29609 |
T |
 |
Q |
222 |
tgatggcttggcaaca |
237 |
Q |
|
|
|||||||||||||||| |
|
|
T |
29608 |
tgatggcttggcaaca |
29593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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