View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0651_low_3 (Length: 382)
Name: NF0651_low_3
Description: NF0651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0651_low_3 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 347; Significance: 0; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 39169172 - 39168800
Alignment:
Q |
1 |
ctgatggcctcaccagatgaggggtggtaggtttgattccggtacattgctgctactctgaaggtgagacgagtgtcttgttgtagatcttttaaaaaga |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
39169172 |
ctgatggcctcaccagatgaggggtggtaggtttgattccggtacattgctgctactctgaaggtgagacgagtgtcttgttgtagatcttttaaaaaga |
39169073 |
T |
 |
Q |
101 |
gttgataatcagattcccacttatcctcaacaacaacaa---ttctaccattttcttcatcataactactcttggtaatcaaaattgcagcaggaaggtc |
197 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
39169072 |
gttgataatcagattcccacttaccctcaacaacaacaacaattctaccattttcttcatcataactactcttggtaatcaaaattgcagcaggaaggtc |
39168973 |
T |
 |
Q |
198 |
gccattgatattggtgttagctcctcctccttcttttcctccagacaagtcataaccaagagcatagtcaccggattttaaaatatgacctagatgagtt |
297 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
39168972 |
gccattgatattggtgttagctcctcctccttctttacgtccagacaagtcataaccaagagcatagtcaccggattttaaaatatgacctagatgagtt |
39168873 |
T |
 |
Q |
298 |
ttgatttgaaaagttgtgtcattatttccaaaatcttccacacgagcaaccacggcatcagctaaccgatatt |
370 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
39168872 |
ttgatttgaaaagttgtgtcattatttccaaaatcttccacacgagcaaccacggcatcagctaaccgatatt |
39168800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 72 - 362
Target Start/End: Complemental strand, 40418529 - 40418245
Alignment:
Q |
72 |
agtgtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccattttcttcatcataactactcttg |
171 |
Q |
|
|
|||||||||||||||||| || || ||||||||||||||||||||||||||||| | || | |||||| ||||||||| ||||| |||||||| ||||| |
|
|
T |
40418529 |
agtgtcttgttgtagatcattgaagaagagttgataatcagattcccacttatcatgaagagcaacaactctaccattctcttcggcataactaatcttg |
40418430 |
T |
 |
Q |
172 |
gtaatcaaaattgcagcaggaaggtcgccattgatattggtgttagctcctcctccttcttttcctccagacaagtcataaccaagagcatagtcaccgg |
271 |
Q |
|
|
|| |||||||| ||||||||||||| | |||||| ||||||| |||||||||| || |||||||||| ||||||||||||||||| |||||||| |
|
|
T |
40418429 |
gtgatcaaaatggcagcaggaaggttgatattgatgttggtgtcagctcctccttct------cctccagacaggtcataaccaagagcatggtcaccgg |
40418336 |
T |
 |
Q |
272 |
attttaaaatatgacctagatgagttttgatttgaaaagttgtgtcattatttccaaaatcttccacacgagcaaccacggcatcagctaa |
362 |
Q |
|
|
|||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| |
|
|
T |
40418335 |
gttttaaaatacgaccaagatgagtcctgatttgaaaagttgtgtcattatttccaatatctttcacacgagcaaccacagcatcagctaa |
40418245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 72 - 370
Target Start/End: Complemental strand, 39880066 - 39879768
Alignment:
Q |
72 |
agtgtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccattttcttcatcataactactcttg |
171 |
Q |
|
|
||||| |||||||||||| || || ||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||| |||||||| ||||| |
|
|
T |
39880066 |
agtgttttgttgtagatcattgaagaagagttgataatcagattcccacttatccttgacagcaacaactctaccattcacttcggcataactaatcttg |
39879967 |
T |
 |
Q |
172 |
gtaatcaaaattgcagcaggaaggtcgccattgatattggtgttagctcctcctccttcttttcctccagacaagtcataaccaagagcatagtcaccgg |
271 |
Q |
|
|
| |||||||| ||||||||||||| | |||| | ||||||| |||||||||| || || ||||||||||| ||||||||||||||||| |||||||| |
|
|
T |
39879966 |
ctgatcaaaatggcagcaggaaggttgttattggtgttggtgtcagctcctccttctcctactcctccagacaggtcataaccaagagcatggtcaccgg |
39879867 |
T |
 |
Q |
272 |
attttaaaatatgacctagatgagttttgatttgaaaagttgtgtcattatttccaaaatcttccacacgagcaaccacggcatcagctaaccgatatt |
370 |
Q |
|
|
|||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||| |
|
|
T |
39879866 |
gttttaaaatacgaccaagatgagtcctgatttgaaaagttgtgtcattatttccagtatctttcacacgagcaaccacagcatcagctaaacgatatt |
39879768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 75 - 370
Target Start/End: Complemental strand, 39726667 - 39726372
Alignment:
Q |
75 |
gtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccattttcttcatcataactactcttggta |
174 |
Q |
|
|
||||||||||||||| || || ||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||| |||||||| ||||| | |
|
|
T |
39726667 |
gtcttgttgtagatcattgaagaagagttgataatcagattcccacttatccttgacagcaacaactctaccattcacttcggcataactaatcttgctg |
39726568 |
T |
 |
Q |
175 |
atcaaaattgcagcaggaaggtcgccattgatattggtgttagctcctcctccttcttttcctccagacaagtcataaccaagagcatagtcaccggatt |
274 |
Q |
|
|
|||||||| ||||||||||||| | |||| | ||||||| |||||||||| || || ||||||||||| ||||||||||||||||| |||||||| || |
|
|
T |
39726567 |
atcaaaatggcagcaggaaggttgttattggtgttggtgtcagctcctccttctcctactcctccagacaggtcataaccaagagcatggtcaccgggtt |
39726468 |
T |
 |
Q |
275 |
ttaaaatatgacctagatgagttttgatttgaaaagttgtgtcattatttccaaaatcttccacacgagcaaccacggcatcagctaaccgatatt |
370 |
Q |
|
|
|||| ||| |||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||| |
|
|
T |
39726467 |
ttaagatacgaccgagatgagtcctgatttgaaaagttgtgtcattatttccagtatctttcacacgagcaaccacagcatcagctaaacgatatt |
39726372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 75 - 370
Target Start/End: Complemental strand, 38987948 - 38987659
Alignment:
Q |
75 |
gtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccattttcttcatcataactactcttggta |
174 |
Q |
|
|
||||||||||||||| || || ||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||| |||||||| ||||| | |
|
|
T |
38987948 |
gtcttgttgtagatcattgaagaagagttgataatcagattcccacttatccttgacagcaacaactctaccattcacttcggcataactaatcttgctg |
38987849 |
T |
 |
Q |
175 |
atcaaaattgcagcaggaaggtcgccattgatattggtgttagctcctcctccttcttttcctccagacaagtcataaccaagagcatagtcaccggatt |
274 |
Q |
|
|
|||||||| ||||||||||||| | |||| | ||||||| |||||||||| || |||||||||| ||||||||||||||||| |||||||| || |
|
|
T |
38987848 |
atcaaaatggcagcaggaaggttgttattggtgttggtgtcagctcctccttct------cctccagacaggtcataaccaagagcatggtcaccgggtt |
38987755 |
T |
 |
Q |
275 |
ttaaaatatgacctagatgagttttgatttgaaaagttgtgtcattatttccaaaatcttccacacgagcaaccacggcatcagctaaccgatatt |
370 |
Q |
|
|
|||| ||| |||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||| |
|
|
T |
38987754 |
ttaagatacgaccgagatgagtcctgatttgaaaagttgtgtcattatttccagtatctttcacacgagcaaccacagcatcagctaaacgatatt |
38987659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 24 - 362
Target Start/End: Complemental strand, 39400144 - 39399821
Alignment:
Q |
24 |
gtggtaggtttgattccggtacattgctgctactctgaaggtgagacgagtgtcttgttgtagatcttttaaaaagagttgataatcagattcccactta |
123 |
Q |
|
|
||||| || |||||| ||||||||||||||| | ||||||||||| ||| | ||||| |||||||| ||| ||||||||||||||||||| ||||||| |
|
|
T |
39400144 |
gtggttgggttgatttcggtacattgctgctgcgttgaaggtgagatgagggccttgtcttagatcttctaagaagagttgataatcagattgccactta |
39400045 |
T |
 |
Q |
124 |
tcctcaacaacaacaattctaccattttcttcatcataactactcttggtaatcaaaattgcagcaggaaggt---cgccattgata---ttggtgttag |
217 |
Q |
|
|
||| || |||||| || | |||||| || || |||||| |||||||||||||||||| | || |||||||||| |||||||||| |
|
|
T |
39400044 |
tccggaataacaactgatcca---------tcatcacaattagtcttggcaatcaaaattgcagcaggcaagtagccgccattgatgatgttggtgttag |
39399954 |
T |
 |
Q |
218 |
ctcctcctccttcttttcctccagacaagtcataaccaagagcatagtcaccggattttaaaatatgacctagatgagttttgatttgaaaagttgtgtc |
317 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
T |
39399953 |
ctcctcctcc------------agacaagtcataaccaagagcatagtcaccggattttaaaatatgaccaagatgagtcctgatttgaaaagttgtgtc |
39399866 |
T |
 |
Q |
318 |
attatttccaaaatcttccacacgagcaaccacggcatcagctaa |
362 |
Q |
|
|
|||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
39399865 |
attatttccaaaattttccacacgagcaaccacggcatcagctaa |
39399821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 240 - 370
Target Start/End: Complemental strand, 3299620 - 3299487
Alignment:
Q |
240 |
agacaagtcataaccaagagcatagtcaccggattttaaaatatgacctagatgagttttgatttgaaaagttgtg---tcattatttccaaaatcttcc |
336 |
Q |
|
|
||||| ||||||||||||||||| |||||||| |||||||||| |||| |||||||| |||||||||||||||||| | ||||||||||| ||||| | |
|
|
T |
3299620 |
agacaggtcataaccaagagcatggtcaccgggttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgtgattattatttccaatatctttc |
3299521 |
T |
 |
Q |
337 |
acacgagcaaccacggcatcagctaaccgatatt |
370 |
Q |
|
|
||||||||||||| |||||||||||| ||||||| |
|
|
T |
3299520 |
acacgagcaaccatggcatcagctaaacgatatt |
3299487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 240 - 370
Target Start/End: Complemental strand, 3392513 - 3392380
Alignment:
Q |
240 |
agacaagtcataaccaagagcatagtcaccggattttaaaatatgacctagatgagttttgatttgaaaagttgtg---tcattatttccaaaatcttcc |
336 |
Q |
|
|
||||| ||||||||||||||||| |||||||| |||||||||| |||| |||||||| |||||||||||||||||| | ||||||||||| ||||| | |
|
|
T |
3392513 |
agacaggtcataaccaagagcatggtcaccgggttttaaaatacgaccaagatgagtcttgatttgaaaagttgtgtgattattatttccaatatctttc |
3392414 |
T |
 |
Q |
337 |
acacgagcaaccacggcatcagctaaccgatatt |
370 |
Q |
|
|
||||||||||||| |||||||||||| ||||||| |
|
|
T |
3392413 |
acacgagcaaccatggcatcagctaaacgatatt |
3392380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 3299767 - 3299640
Alignment:
Q |
72 |
agtgtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccatt---ttcttcatcataactactc |
168 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||| |||||||| | |
|
|
T |
3299767 |
agtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttatcctgaacagcaacaactctaccattctcctcttcggcataactaatt |
3299668 |
T |
 |
Q |
169 |
ttggtaatcaaaattgcagcaggaaggt |
196 |
Q |
|
|
||||| |||||||| ||||||||||||| |
|
|
T |
3299667 |
ttggtgatcaaaatggcagcaggaaggt |
3299640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 3392660 - 3392533
Alignment:
Q |
72 |
agtgtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccatt---ttcttcatcataactactc |
168 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||| |||||||| | |
|
|
T |
3392660 |
agtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttatcctgaacagcaacaactctaccattctcctcttcggcataactaatt |
3392561 |
T |
 |
Q |
169 |
ttggtaatcaaaattgcagcaggaaggt |
196 |
Q |
|
|
||||| |||||||| ||||||||||||| |
|
|
T |
3392560 |
ttggtgatcaaaatggcagcaggaaggt |
3392533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 246 - 370
Target Start/End: Original strand, 1163693 - 1163817
Alignment:
Q |
246 |
gtcataaccaagagcatagtcaccggattttaaaatatgacctagatgagttttgatttgaaaagttgtg-tcattatttccaaaatcttccacacgagc |
344 |
Q |
|
|
||||||||||||||||| |||||||| |||||||||| |||| |||||||| |||||||||||| |||| | ||||||||||| ||||| |||||||| |
|
|
T |
1163693 |
gtcataaccaagagcatggtcaccgggttttaaaatacgaccaagatgagtcctgatttgaaaag-tgtgattattatttccaatatctttgacacgagc |
1163791 |
T |
 |
Q |
345 |
aaccacggcatcagctaaccgatatt |
370 |
Q |
|
|
||| | ||||| |||||| ||||||| |
|
|
T |
1163792 |
aactatggcattagctaaacgatatt |
1163817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 246 - 370
Target Start/End: Complemental strand, 1850046 - 1849919
Alignment:
Q |
246 |
gtcataaccaagagcatagtcaccggattttaaaatatgacctagatgagttttgatttgaaaagttgtg---tcattatttccaaaatcttccacacga |
342 |
Q |
|
|
||||||||||||||||| |||||| | |||||||||| ||| |||||||| ||||||||||||||||| | ||||||||||| ||||| ||||||| |
|
|
T |
1850046 |
gtcataaccaagagcatggtcaccaggttttaaaatacgactaagatgagtcctgatttgaaaagttgtgtgattattatttccaatatctttcacacga |
1849947 |
T |
 |
Q |
343 |
gcaaccacggcatcagctaaccgatatt |
370 |
Q |
|
|
||||| | ||||| |||||| ||||||| |
|
|
T |
1849946 |
gcaactatggcattagctaaacgatatt |
1849919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 1163564 - 1163674
Alignment:
Q |
75 |
gtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccatt---ttcttcatcataactactcttg |
171 |
Q |
|
|
||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||| ||||||||| |||| | || ||||| ||||| |
|
|
T |
1163564 |
gtcttgttgtagatcttttaagaagagttgataaccagattcccacttatcctgaacaggaacaactctaccattctcctctttagcaaaactaatcttg |
1163663 |
T |
 |
Q |
172 |
gtaatcaaaat |
182 |
Q |
|
|
||||||||||| |
|
|
T |
1163664 |
gtaatcaaaat |
1163674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 1850175 - 1850065
Alignment:
Q |
75 |
gtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccatt---ttcttcatcataactactcttg |
171 |
Q |
|
|
||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| || || ||||||||| |||| | || ||||| ||||| |
|
|
T |
1850175 |
gtcttgttgtaaatcttttaagaagagttgataatcagattcccacttatcctgaacaggaataactctaccattctcctctttagcaaaactaatcttg |
1850076 |
T |
 |
Q |
172 |
gtaatcaaaat |
182 |
Q |
|
|
||||||||||| |
|
|
T |
1850075 |
gtaatcaaaat |
1850065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 348
Target Start/End: Original strand, 40102209 - 40102315
Alignment:
Q |
242 |
acaagtcataaccaagagcatagtcaccggattttaaaatatgacctagatgagttttgatttgaaaagttgtgtcattatttccaaaatcttccacacg |
341 |
Q |
|
|
||||||||||||||| ||||| |||||| |||| |||| || ||| |||||||| ||||| | ||| | |||||||| ||||||||||||| |||||| |
|
|
T |
40102209 |
acaagtcataaccaaaagcatggtcaccaaatttcaaaagataacccagatgagtcttgatattaaatctcgtgtcattctttccaaaatctttcacacg |
40102308 |
T |
 |
Q |
342 |
agcaacc |
348 |
Q |
|
|
||||||| |
|
|
T |
40102309 |
agcaacc |
40102315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 138; Significance: 5e-72; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 75 - 370
Target Start/End: Original strand, 25912130 - 25912422
Alignment:
Q |
75 |
gtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccattttcttcatcataactactcttggta |
174 |
Q |
|
|
|||||| ||||||| ||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||| |||||||| ||||||| |
|
|
T |
25912130 |
gtcttgctgtagataatttaagaagagttgataatcagattcccacttatcctgaacagcaacaactctaccattctcttcggcataactaatcttggtg |
25912229 |
T |
 |
Q |
175 |
atcaaaattgcagcaggaaggtcgccattgatattggtgttagctcctcctccttcttttcctccagacaagtcataaccaagagcatagtcaccggatt |
274 |
Q |
|
|
|||||||| |||||| |||||| | |||| | |||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| |||| ||| || |
|
|
T |
25912230 |
atcaaaatggcagcatgaaggttgttattggtgttggtgttagctcc---tccttctcctcctctagacaggtcataaccaagagcatggtcatcgggtt |
25912326 |
T |
 |
Q |
275 |
ttaaaatatgacctagatgagttttgatttgaaaagttgtgtcattatttccaaaatcttccacacgagcaaccacggcatcagctaaccgatatt |
370 |
Q |
|
|
||| |||| |||| |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||||||| |
|
|
T |
25912327 |
ttagaatacgaccaagatgagtcctgatttgaaaagttgtgtcattatttccaatatctttcacacgagcaaccacatcatcagctaaacgatatt |
25912422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 59 - 312
Target Start/End: Original strand, 44444596 - 44444838
Alignment:
Q |
59 |
tgaaggtgagacgagtgtcttgttgtagatcttttaaaaagagttgataatcagattcccacttatcctcaacaacaacaattctaccattttcttcatc |
158 |
Q |
|
|
||||||||||| ||| | |||||| ||||| |||||| || |||| ||||||||||||| | ||||||| ||||||||| || |||| |||||||| |
|
|
T |
44444596 |
tgaaggtgagatgagcggcttgttttagatattttaagaaaagtttataatcagattccaatttatcctgaacaacaactatgt---cattctcttcatc |
44444692 |
T |
 |
Q |
159 |
ataactactcttggtaatcaaaattgcagcaggaaggtcgccattgatattggtgttagctcctcctccttcttttcctccagacaagtcataaccaaga |
258 |
Q |
|
|
|||||| | ||||||||||||||||||||| ||||||||||| || | ||| ||||||||| ||||| | || ||| || |||||||||||| |
|
|
T |
44444693 |
gtaactagtattggtaatcaaaattgcagcacgaaggtcgccaatggtgttgatgttagctcttcctcttact---cctatag-----tcataaccaaga |
44444784 |
T |
 |
Q |
259 |
gcatagtcaccggattttaaaatatgacctagatgagttttgatttgaaaagtt |
312 |
Q |
|
|
||||||||||| | |||||||||| |||| |||||||| ||||||||||||||| |
|
|
T |
44444785 |
gcatagtcaccaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt |
44444838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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