View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0652_high_7 (Length: 311)
Name: NF0652_high_7
Description: NF0652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0652_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 146; Significance: 6e-77; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 32737734 - 32737887
Alignment:
| Q |
155 |
ctgaagtctaaatacatttacataaatgggattttccagctaacaagaatgtaacaatacatactagtatcttaaccatccaatatttcttccaccaaac |
254 |
Q |
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| T |
32737734 |
ctgaagtctaaatacatttacataaatgggattttccagctaacaagaatgtaacaatacataatagtatcttaaccatccaatatttcttccaccaaac |
32737833 |
T |
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| Q |
255 |
ccaaagtatcttaatcctaaaccaaatgaaaggttaaatctttaacaacaacaa |
308 |
Q |
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| T |
32737834 |
ccaaagtatcttaatcctaaacccaatgaaaggttaaatctttaacaacaacaa |
32737887 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 32737615 - 32737668
Alignment:
| Q |
36 |
tgcactcattactcattatccagacaaagcaataccaaacacagcctaagcaca |
89 |
Q |
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| T |
32737615 |
tgcactcattactcattatccagacaaagcaataccaaacacagcctaagcaca |
32737668 |
T |
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