View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0652_low_12 (Length: 387)
Name: NF0652_low_12
Description: NF0652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0652_low_12 |
 | |
|
| [»] scaffold0130 (1 HSPs) |
| | |
|
| [»] scaffold0022 (1 HSPs) |
| | |
|
| [»] scaffold0016 (2 HSPs) |
| | |
|
| [»] scaffold0319 (1 HSPs) |
| | |
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| [»] scaffold0040 (1 HSPs) |
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|
| [»] scaffold0108 (1 HSPs) |
| | |
|
| [»] scaffold0064 (1 HSPs) |
| | |
|
| [»] scaffold0241 (1 HSPs) |
| | |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
| | |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0051 (1 HSPs) |
| | |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0107 (2 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0013 (3 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
| | |
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| [»] scaffold0423 (1 HSPs) |
| | |
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| [»] scaffold0008 (1 HSPs) |
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|
Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 24 - 374
Target Start/End: Original strand, 23626115 - 23626466
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
23626115 |
tcatcgaagtgtttgatttttcaaagactgcatgttgctcttctacacaaccgttattcatgacataatagcatagcggcttgtgagttgccatttcatc |
23626214 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23626215 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagat |
23626314 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
23626315 |
ccagtgaaattcgaagtcatttctacatcctccttgggatgatcttttttcaatattgacaatgggggcgagattctctctgttgctggtttcttaacca |
23626414 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
23626415 |
ttttgaacacagctttctgcttaccctctgttttgtcaacattggtgatgtc |
23626466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 24 - 362
Target Start/End: Complemental strand, 22638655 - 22638316
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
22638655 |
tcattgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcatc |
22638556 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22638555 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagat |
22638456 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22638455 |
ccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca |
22638356 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaac |
362 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
22638355 |
tttcgaacacagccttctgcttaccctctgttttatcaac |
22638316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 24 - 374
Target Start/End: Original strand, 23200486 - 23200837
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||| ||||||||||||| |
|
|
| T |
23200486 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatc |
23200585 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||||| |
|
|
| T |
23200586 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagat |
23200685 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
|| |||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
23200686 |
cccgtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca |
23200785 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
23200786 |
tttcgaacacagccttctgcttaccctctgttttgtcaacattggtgatgtc |
23200837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 24 - 344
Target Start/End: Complemental strand, 24912234 - 24911914
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||||| ||||| |||||||| | |||||||| || |
|
|
| T |
24912234 |
tcatcgaagcatctggtttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgcgtcgccatttcgtc |
24912135 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||| |||||||| | ||| |||| |||| ||||||||||||||||||| ||| || || |||||||| || |||||||||||||| ||||||||| |
|
|
| T |
24912134 |
aacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacagatagaattgataccacattgcatactatgtcgagactggggtcagat |
24912035 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||| || ||||| ||||||||||| ||||| || ||||||| ||||||||||| ||||||| |
|
|
| T |
24912034 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatggtccttctttaagattgacaa-gggggtgaaattctctttgttgctggttttttaacca |
24911936 |
T |
|
| Q |
323 |
tttcgaacacagctttctgctt |
344 |
Q |
| |
|
||||||| |||||| ||||||| |
|
|
| T |
24911935 |
tttcgaaaacagctctctgctt |
24911914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 24 - 374
Target Start/End: Complemental strand, 43482 - 43131
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| || |||||||||| |
|
|
| T |
43482 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagcgccttgtgagtttccatttcatc |
43383 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
43382 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccagtaggatagaaaccacattgcacactatgtcgagactagggtcagat |
43283 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
|| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
43282 |
cccgtgaaattcgaagtcagttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca |
43183 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
43182 |
ttttgaacacagctttctgcttaccctctgttttatcaacattggtgatgtc |
43131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 24 - 362
Target Start/End: Original strand, 18171491 - 18171830
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
18171491 |
tcattgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcatc |
18171590 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|||||||||||||| || ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
18171591 |
gacgaaatcactttgcacttcgttaatttctgactgaacgttgtattccaccagtaggatagaaaccacattgtacactatgtcgagactagggtcagat |
18171690 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||| |
|
|
| T |
18171691 |
ccagtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaagattgacaatgggggcgaaattctttctgttgctggttttttaacca |
18171790 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaac |
362 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
18171791 |
tttcgaacacagctttctgcttaccctctcctttgtcaac |
18171830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 53 - 366
Target Start/End: Original strand, 14342542 - 14342856
Alignment:
| Q |
53 |
gcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaattt |
152 |
Q |
| |
|
|||||||| ||||| ||||| || |||||||||| |||||||||||| ||||||||| |||||||||||||||| || ||| |||||| ||| ||||| | |
|
|
| T |
14342542 |
gcatgttgttcttccacacagccattattcatgacataatagcatagtggcttgtgagttgccatttcatcgacaaagtcattttccacttcattaatct |
14342641 |
T |
|
| Q |
153 |
ctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatc |
251 |
Q |
| |
|
|| |||| || ||||||||||| | ||||| ||| ||||||| || ||||||||||| || ||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
14342642 |
ctgactggacatcgtattccacaggcaggattgaaaccacattgcaaactatgtcgaggctcgggtcagattccgtgaaatttgaagtcatctcctcatc |
14342741 |
T |
|
| Q |
252 |
ctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgcttaccctct |
351 |
Q |
| |
|
||| |||| | |||||||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14342742 |
ctctttggaacaatctttcttcaaaattgacaatgggggtgaaattctttttgttgctggtttcttaaccatttcgaacacagctttctgcttatcctcc |
14342841 |
T |
|
| Q |
352 |
gttttgtcaacgttg |
366 |
Q |
| |
|
|||| ||||| |||| |
|
|
| T |
14342842 |
gtttggtcaatgttg |
14342856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 209 - 374
Target Start/End: Original strand, 18133578 - 18133743
Alignment:
| Q |
209 |
gactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgc |
308 |
Q |
| |
|
|||| ||||||||| | ||||||||||||||||| |||||||| || |||| | |||||||||||| |||||||||||||| || |||| ||| ||||| |
|
|
| T |
18133578 |
gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaacgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc |
18133677 |
T |
|
| Q |
309 |
tggtttcttaaccatttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||||||||||||||| ||||||||| |||| ||||| ||||| ||||||||| ||| ||||||| |
|
|
| T |
18133678 |
tggtttcttaaccatctcgaacacaactttttgcttgccctcccttttgtcaatattggtgatgtc |
18133743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 24 - 374
Target Start/End: Complemental strand, 23435442 - 23435091
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| | |||||| || |||||||||| |
|
|
| T |
23435442 |
tcatcgacgtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagagaattgtgagttaccatttcatc |
23435343 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23435342 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccagtaagatagaaaccacattgcacactatgtcgagactagggtcagat |
23435243 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
|| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
23435242 |
cccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctattgctggtttcttaacca |
23435143 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
23435142 |
tttcgaacacaaccttctgcttaccctctgttttgtcaacattggtgatgtc |
23435091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 24 - 374
Target Start/End: Original strand, 19035035 - 19035386
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19035035 |
tcatcgaagtatctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcataatggcttgtgaattgccatttcatc |
19035134 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|||||| |||||||| | ||| ||||||||| |||| |||||||||||||| ||||||| || |||||||| || | || || ||||| ||||||||| |
|
|
| T |
19035135 |
gacgaagtcactttcaacttcattaatttctgactgcacgtcgtattccacaggtaggatcgagaccacattgcatataatatcaagactggggtcagat |
19035234 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||| ||||||||||| ||||||| ||||||| || ||||||||| ||||||||||| | ||||||||||| ||||||||||| ||||| | |
|
|
| T |
19035235 |
ccagtgaaattcgaagtcatttcttcatcctttttgggattatttttcttcaaaattgacaatggagatgagattctctctgttgctggttttttaacta |
19035334 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||||||||| |||||| ||||| |||||| ||||||||| ||| ||||||| |
|
|
| T |
19035335 |
tttcgaacatagctttttgcttgccctctcctttgtcaacattggtgatgtc |
19035386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 24 - 374
Target Start/End: Complemental strand, 11698 - 11347
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
11698 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaactattattcatgacataatagcatagtggcttgttaattgccatttcatc |
11599 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||| ||||||| ||||||||||| ||||||| || ||||||| |||||||||||||||| |
|
|
| T |
11598 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcatattccataggtaggatagaaaccacattgcatactatgttgagactagggtcagat |
11499 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
11498 |
tcagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggcgagattctctctgttgctggttttttaacca |
11399 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
11398 |
tttcgaacacagctttctgcttaccctctgttttgtcaacattggtgatgtc |
11347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 248; Significance: 1e-137; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 24 - 362
Target Start/End: Original strand, 126416 - 126755
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||| ||||||||| ||| |
|
|
| T |
126416 |
tcatagaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggattgtgagttgccatttaatc |
126515 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| ||| |||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||||| |
|
|
| T |
126516 |
gacgaaatcactttcaacttcgttaatttctgactaaacgtcgtattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagat |
126615 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
126616 |
ccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca |
126715 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaac |
362 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
126716 |
tttcgaacacagccttctgcttaccctctgttttatcaac |
126755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 323
Target Start/End: Original strand, 179311 - 179447
Alignment:
| Q |
187 |
accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatg |
286 |
Q |
| |
|
|||||||| |||||||| |||| || |||||||| | |||||| || |||||||| |||||||| || ||||| ||||||||||| |||||||| | |
|
|
| T |
179311 |
accacattgcacactatatcgaagcttgggtcagacttggagaaattcgacgtcatttcttcatcctctttaggatggtctttcttcaaaattgacaaag |
179410 |
T |
|
| Q |
287 |
ggggcgagattctctccgttgctggtttcttaaccat |
323 |
Q |
| |
|
| || |||||||| || || |||| ||| |||||||| |
|
|
| T |
179411 |
gaggggagattctttctgtggctgattttttaaccat |
179447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 24 - 374
Target Start/End: Original strand, 13289224 - 13289575
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
13289224 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgacataatagcatagtggcttgtgaattgacatttcatc |
13289323 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| | |||||||| ||||||| ||||||||||| ||||||| || |||||||||||||||||||||||| |
|
|
| T |
13289324 |
gacgaaatcactttcaacttcgttaatttctgaatgaacgtcatattccaaaggtaggatagaaaccacattgcatactatgtcgagactagggtcagat |
13289423 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||| || ||||||| |
|
|
| T |
13289424 |
ccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggcgagattctctctgttgctggctttttaacca |
13289523 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
13289524 |
tttcgaacacagctttctgcttaccctctcctttgtcaacattggtgatgtc |
13289575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 24 - 341
Target Start/End: Original strand, 14772424 - 14772742
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||| ||||| |||||||| |||||||||| || |
|
|
| T |
14772424 |
tcatcgaagcgtctggtttttcaaagacaacatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtc |
14772523 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|||||| |||||||| | ||| |||| |||| ||||||||||||||||||| ||||||| || |||||||| || ||||| |||||||| ||||||||| |
|
|
| T |
14772524 |
gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacaggtaggatcgagaccacattgcatactatatcgagactggggtcagat |
14772623 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
14772624 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaacca |
14772723 |
T |
|
| Q |
323 |
tttcgaacacagctttctg |
341 |
Q |
| |
|
||||||| |||||| |||| |
|
|
| T |
14772724 |
tttcgaatacagctctctg |
14772742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 18562450 - 18562670
Alignment:
| Q |
56 |
tgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaatttcta |
155 |
Q |
| |
|
||||| ||||| |||||||| |||||||| | ||| ||||||| ||||| ||||| ||||||||||| | ||| |||||||||| ||| || | || |
|
|
| T |
18562450 |
tgttgatcttcgacacaaccattattcataacatagtagcataatggcttatgaatagccatttcatcaatgaagtcactttccacttcattgacctccg |
18562549 |
T |
|
| Q |
156 |
actgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctc |
254 |
Q |
| |
|
| |||| |||||||| || ||||| | || || ||||| || | |||||||||||| ||||||||| ||| || ||||| |||||||| ||||| || |
|
|
| T |
18562550 |
aaggaacatcgtattcgactagtagcactgacacgacattgcatattatgtcgagactcgggtcagattcagaaaagtttgacgtcatttcttcatcttc |
18562649 |
T |
|
| Q |
255 |
cttgggatgatctttcttcaa |
275 |
Q |
| |
|
||| ||| ||||||||||||| |
|
|
| T |
18562650 |
ctttggaggatctttcttcaa |
18562670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 24 - 374
Target Start/End: Complemental strand, 9977 - 9626
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || |
|
|
| T |
9977 |
tcattgaagtatctggtttttcaaagactgcatgttgctcttctacgcaaccgttattcatgacataataacatagtggcttgtgaattgccatttcgtc |
9878 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| | ||||||||||||||||| ||||||||||| ||||||| || |||||||||||||||||||||||| |
|
|
| T |
9877 |
gacgaaatcactttcaacttcgttaatttctgattgaacgtcgtattccacaggtaggatagaaaccacattgcatactatgtcgagactagggtcagat |
9778 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||| |||||||| || |||||||||||||| ||||||||||| |||||||| || ||||||| |
|
|
| T |
9777 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatgttctttctttaaaattgacaatgggggtgagattctctctgttgctggctttttaacca |
9678 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
9677 |
tttcgaacacagctttctgcttaccctctcctttgtcaacattggtgatgtc |
9626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 24 - 374
Target Start/End: Original strand, 17422711 - 17423062
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||||| ||||||||||||| |
|
|
| T |
17422711 |
tcatcgaagtttctggtttttcgaagactgcatgttgctcttctacacaaccattattcatgacataagagcatagtggcttgtgggttgccatttcatc |
17422810 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||| || ||||||||||| ||||||||||| ||||||| || ||||||||||| || ||||||||| |
|
|
| T |
17422811 |
gacgaaatcactttccactttgttaatttctgactggacatcgtattccacaggtaggatagaaaccacattgcaaactatgtcgaggctcgggtcagat |
17422910 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
17422911 |
cccgtgaaattcgaagtcatctcctcatcctctttgggatgatctttcttcaagattgacaatgggggtgagattctctctgttgctggtttcttaacca |
17423010 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||||||||||| ||| ||||||| |
|
|
| T |
17423011 |
tttcgaacacctctttctgcttatcctccgttttgtcaacattggtgatgtc |
17423062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 24 - 344
Target Start/End: Original strand, 22348621 - 22348942
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||| ||||| ||||||||||||||||| |||||||| || ||||||||||| |||||||| | |||||||||||| ||||||||| |||||||||| || |
|
|
| T |
22348621 |
tcattgaagtatctggtttttcaaagacagcatgttgttcctctacacaaccattattcataacataatagcatagtggcttgtgagttgccatttcgtc |
22348720 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|||||| |||||||| | ||| |||| |||| ||||||||||||||| ||| ||||||| ||| ||||||| || || || || ||||| ||||||||| |
|
|
| T |
22348721 |
gacgaagtcactttcaacttcattaacttctgactgaacgtcgtatttcacaggtaggatcgaaaccacattgcatacgatatcaagactggggtcagat |
22348820 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||| ||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||| |
|
|
| T |
22348821 |
ccaatgaaatttgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggtgagattctctctattgctggttttttaacca |
22348920 |
T |
|
| Q |
323 |
tttcgaacacagctttctgctt |
344 |
Q |
| |
|
||||||||||| |||||||||| |
|
|
| T |
22348921 |
tttcgaacacaactttctgctt |
22348942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 24 - 341
Target Start/End: Complemental strand, 1735635 - 1735317
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||| | ||||| || || || || |||||||| ||||| ||||| || |||||||||| |||||||||||| || |||||| ||||||| ||||| |
|
|
| T |
1735635 |
tcatcgaaatatctggcttctcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcatagtggtttgtgagttgccatctcatc |
1735536 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatag-aaccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|||||| |||||||| | ||| ||||| ||| |||| || ||||||||||| | | ||| | ||||||||| || |||||||| ||||| ||||||||| |
|
|
| T |
1735535 |
gacgaagtcactttcgacttcattaatatctgactggacatcgtattccacaggcaagatggaaaccacattacagactatgtcaagacttgggtcagat |
1735436 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
| ||||||||||||||||| ||||| || || || | |||||||||||||| |||||||||||||| || |||| || |||||||| |||||||||| |
|
|
| T |
1735435 |
tccgtgaaatttgaagtcatctcctcgtcttcttttgaatgatctttcttcagaattgacaatgggggtgaaattcgttctgttgctggcttcttaacca |
1735336 |
T |
|
| Q |
323 |
tttcgaacacagctttctg |
341 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
1735335 |
tctcgaacacagctttctg |
1735317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 35 - 335
Target Start/End: Complemental strand, 22068088 - 22067788
Alignment:
| Q |
35 |
tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac |
134 |
Q |
| |
|
|||||| ||||||| || ||||| |||||||| ||||| || || ||||||| ||||||||||| ||||| || || ||||||| |||| ||| |||| |
|
|
| T |
22068088 |
tctggtctttcaaaaacggcatgctgctcttcaacacagccattgttcatgacataatagcataatggcttatggatggccattttgtcgatgaagtcac |
22067989 |
T |
|
| Q |
135 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatt |
233 |
Q |
| |
|
|||| | ||| |||| ||| ||||||||||||||||||| | | | || |||||||| |||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
22067988 |
tttcaacttcattaacttccgactgaacgtcgtattccacaggaaaaactgacaccacattgcacactatatcgagact-gggtcagatccagtgaaatt |
22067890 |
T |
|
| Q |
234 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacaca |
333 |
Q |
| |
|
||||||||||| ||||||||||| |||||| || ||||||| ||||| || || || |||||||| ||| | ||||| || |||||||||| ||| ||| |
|
|
| T |
22067889 |
cgaagtcatttcttcatcctccttaggatgacctctcttcaaaattgataagggaggggagattctttccatggctggctttttaaccattttgaaaaca |
22067790 |
T |
|
| Q |
334 |
gc |
335 |
Q |
| |
|
|| |
|
|
| T |
22067789 |
gc |
22067788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 24 - 371
Target Start/End: Complemental strand, 10151125 - 10150777
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10151125 |
tcatcgaagtgtctgatttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
10151026 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatag-aaccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|| |||||||||||| | ||| ||||||||| || ||||||| |||||||| |||| |||| ||||||||| || |||||||| ||||| ||||||||| |
|
|
| T |
10151025 |
gatgaaatcactttcaacttcattaatttctgacggaacgtcatattccacaggtagtatagaaaccacattgcatactatgtcaagactggggtcagat |
10150926 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||| ||||||| |
|
|
| T |
10150925 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggtgagattctctctgtgactggttttttaacca |
10150826 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgat |
371 |
Q |
| |
|
||||||||||| |||| |||| |||||| ||||||||| ||| |||| |
|
|
| T |
10150825 |
tttcgaacacatcttttcgcttgccctctcctttgtcaacattggtgat |
10150777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 85 - 356
Target Start/End: Original strand, 13306794 - 13307066
Alignment:
| Q |
85 |
gaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggata |
184 |
Q |
| |
|
|||||||||||| || ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
13306794 |
gaaataatagcacagtggcttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttctaactgaacatcgtattccaccggtaggata |
13306893 |
T |
|
| Q |
185 |
gaa-ccacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgaca |
283 |
Q |
| |
|
||| ||||||| || ||||| |||||||||||||||||||| |||||||| |||||||| || |||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
13306894 |
gaaaccacattgcaaactatatcgagactagggtcagatcccgtgaaattcgaagtcatatcttcatcctctttgggatgatctttcttcaaaattgaca |
13306993 |
T |
|
| Q |
284 |
atgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgcttaccctctgtttt |
356 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||| |
|
|
| T |
13306994 |
atgggggtgagattctctctgttgctggtttcttaaccatttcgaacacagttttctgcttatcctgtgtttt |
13307066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 26 - 374
Target Start/End: Original strand, 14693085 - 14693434
Alignment:
| Q |
26 |
atcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcga |
125 |
Q |
| |
|
|||||| | |||||||| || || || |||||||| ||||| ||||| || |||||||||| |||||||||||| ||||||||| || |||||||||||| |
|
|
| T |
14693085 |
atcgaaatatctggtttctcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcatagtggcttgtgagtttccatttcatcga |
14693184 |
T |
|
| Q |
126 |
cgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatcc |
224 |
Q |
| |
|
|||| ||| |||| | ||| ||||||||| |||| || ||||||||||| | | ||||||| ||||||| || ||||||||||| | ||||||||| | |
|
|
| T |
14693185 |
cgaagtcaatttcaacttcattaatttctgactggacatcgtattccacaggcaagatagaaaccacattgcaaactatgtcgaggtttgggtcagattc |
14693284 |
T |
|
| Q |
225 |
agtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatt |
324 |
Q |
| |
|
||||||||||||||||| |||| |||||| |||| ||| |||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||| |
|
|
| T |
14693285 |
cgtgaaatttgaagtcatctccttatcctctttggaatggtctttcttcaagattgacaatgggggtgaaattctctctgttgctggttttttaaccatt |
14693384 |
T |
|
| Q |
325 |
tcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
|||||||| ||||||||||| |||| |||||||||| ||| ||||||| |
|
|
| T |
14693385 |
tcgaacacggctttctgcttgtcctccgttttgtcaatattggtgatgtc |
14693434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 35 - 361
Target Start/End: Original strand, 7401854 - 7402181
Alignment:
| Q |
35 |
tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac |
134 |
Q |
| |
|
||||| || ||||| || |||||||| ||||| || || || |||||||||| |||||||||||| |||||||||||||||||||||||||| || |||| |
|
|
| T |
7401854 |
tctggcttctcaaaaaccgcatgttgttcttccacgcagccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacaaagtcac |
7401953 |
T |
|
| Q |
135 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatag-aaccacattccacactatgtcgagactagggtcagatccagtgaaatt |
233 |
Q |
| |
|
|||||| ||| ||||| ||| |||| || ||||||||| | | ||||| | ||||||||| || |||||||||||||| |||||| || | |||||||| |
|
|
| T |
7401954 |
tttccacttcattaatctctgactggacatcgtattcctcaggcaggattgaaaccacattgcaaactatgtcgagactcgggtcacattccgtgaaatt |
7402053 |
T |
|
| Q |
234 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacaca |
333 |
Q |
| |
|
||||||||| ||||||||||| |||| | || |||||||| |||||||||||||| || ||||| || ||||||| ||||||||||||||||||||| |
|
|
| T |
7402054 |
tgaagtcatctcctcatcctctttggaacaatacttcttcaaaattgacaatgggggtgaaattctttctgttgctgccttcttaaccatttcgaacaca |
7402153 |
T |
|
| Q |
334 |
gctttctgcttaccctctgttttgtcaa |
361 |
Q |
| |
|
|||||||| ||| |||| ||||||||| |
|
|
| T |
7402154 |
gctttctgtttatcctccattttgtcaa |
7402181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 344
Target Start/End: Complemental strand, 10782494 - 10782173
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||| | ||||| || || || || |||||||| ||||| ||||| | |||||||||| ||||||||| || || |||||| ||||||| ||||| |
|
|
| T |
10782494 |
tcatcgaaatatctggcttctcgaaaaccgcatgttgttcttccacacagtcattattcatgacataatagcacagtggtttgtgagttgccatctcatc |
10782395 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||| ||||||||||| ||| ||||||||| |||| || || |||||||| | | || ||| ||||||| || |||||||| ||||| ||||||||| |
|
|
| T |
10782394 |
gacaaaatcactttcggcttcattaatttctgactggacatcatattccacaggcaaaatggaaaccacattacaaactatgtcaagacttgggtcagat |
10782295 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
| |||||||| ||||||||||||||||| || || |||||||||||| ||| || |||||||||||||| |||| ||| |||||||| |||||||||| |
|
|
| T |
10782294 |
tctgtgaaattcgaagtcatttcctcatcttcttttggatgatctttcatcagaatcgacaatgggggcgaaattcgctctgttgctggcttcttaacca |
10782195 |
T |
|
| Q |
323 |
tttcgaacacagctttctgctt |
344 |
Q |
| |
|
| || ||||||||||||||||| |
|
|
| T |
10782194 |
tctcaaacacagctttctgctt |
10782173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 7365311 - 7365426
Alignment:
| Q |
35 |
tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac |
134 |
Q |
| |
|
||||| || ||||| || |||||||| ||||| || || || |||||||||| |||||||||||| |||||||||||||||||||||||||| || |||| |
|
|
| T |
7365311 |
tctggcttctcaaaaaccgcatgttgttcttccacgcagccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacaaagtcac |
7365410 |
T |
|
| Q |
135 |
tttccatttcgttaat |
150 |
Q |
| |
|
|||||| ||| ||||| |
|
|
| T |
7365411 |
tttccacttcattaat |
7365426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 24 - 344
Target Start/End: Complemental strand, 21511327 - 21511006
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| || ||||||||||| ||||||||| |||||||||| || |
|
|
| T |
21511327 |
tcatcgaagtgtctggtttttcaaagacggcatgttgttcttctacacaaccattattcacgacgtaatagcatagtggcttgtgagttgccatttcgtc |
21511228 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||| ||||||||||||| |||||||| ||| |||||||||||||||||||| |||| ||| || |||||||| || | || || ||||| ||||||||| |
|
|
| T |
21511227 |
gacaaaatcactttccacttcgttaacttccaactgaacgtcgtattccacaagtaagatcgagaccacattgcatatgatatcaagactggggtcagat |
21511128 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
21511127 |
ccagtgaaatttgaagtcatttcttcatcctccttgggatgatctttctttaaaattgacaatgggggtgagattctctctgttgctggttttttaacca |
21511028 |
T |
|
| Q |
323 |
tttcgaacacagctttctgctt |
344 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
21511027 |
tttcgaacaccgctttctgctt |
21511006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 24 - 374
Target Start/End: Complemental strand, 29959 - 29608
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||||| |||||||||||| |||||||||||| |||||||||| |
|
|
| T |
29959 |
tcatcgaagtgtctggtttttctaagactgcatgatgctcttctacataaccattattcatgacataatagcatagtggcttgtgaatttccatttcatc |
29860 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatag-aaccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||| || |||||||| || || ||||||||| |
|
|
| T |
29859 |
gacgaaatcactttcaacttcattaatttctgactgaacgtcgtattccactggtaggatagaaaccacattgcatactatgtctaggctggggtcagat |
29760 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
|| ||||||| ||| |||||||| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| | |||||||| ||||||| |
|
|
| T |
29759 |
ccggtgaaatctgaggtcatttcttcatcctctttgggatgatctttcttcaaaattgacaacgggggtgagattctctctatggctggttttttaacca |
29660 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||||||||||| |||| ||||| |||| | ||||||||| ||| ||||||| |
|
|
| T |
29659 |
tttcgaacacatctttttgcttgccctttcttttgtcaatattggtgatgtc |
29608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 26 - 374
Target Start/End: Complemental strand, 26543 - 26194
Alignment:
| Q |
26 |
atcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcga |
125 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||| ||||| || |||||| || ||||||| |||| |
|
|
| T |
26543 |
atcgaagtgtctggtttttcaaatactgcatgttgctcttccacacatccgttattcatgacataataacatagtggtttgtgagtttccatttcgtcga |
26444 |
T |
|
| Q |
126 |
cgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatcc |
224 |
Q |
| |
|
||||||||||||| | ||||||||||||| | |||||||| |||||||| ||||||| || ||||| || || |||||||||||||||||||||||||| |
|
|
| T |
26443 |
cgaaatcactttcgacttcgttaatttctgattgaacgtcatattccacaggtaggatggacaccacgttgcatactatgtcgagactagggtcagatcc |
26344 |
T |
|
| Q |
225 |
agtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatt |
324 |
Q |
| |
|
||||||||| |||||||| || |||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |||||||| || ||||||||| |
|
|
| T |
26343 |
agtgaaattcgaagtcatctcttcatcctccttgagagagtctttcttcaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatt |
26244 |
T |
|
| Q |
325 |
tcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
374 |
Q |
| |
|
||||||||||||||||| ||| ||||| ||||||||| ||| ||||||| |
|
|
| T |
26243 |
tcgaacacagctttctgtttatcctctcctttgtcaacattggtgatgtc |
26194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 177; Significance: 3e-95; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 24 - 351
Target Start/End: Original strand, 37450 - 37778
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||||| |||||| ||||| || |||||| | |||||||| || |
|
|
| T |
37450 |
tcatcgaagtgtctggtttttcaaatactgcatgttgctcttccacacatccattattcatgacataataacatagtggtttgtgagtagccatttcgtc |
37549 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||||||||||||| | ||||||||||||| | |||||||| |||||||| |||||||||| ||||| || || |||||||||||||||||||||||| |
|
|
| T |
37550 |
gacgaaatcactttcgacttcgttaatttctgattgaacgtcatattccacaggtaggatagacaccacgttacatactatgtcgagactagggtcagat |
37649 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||| |||||||| || ||||||||||||||| ||||||||||| |||||||||||||| || ||||||| |||||||| || ||||||| |
|
|
| T |
37650 |
ccagtgaaattcgaagtcatatcttcatcctccttgggaaagtctttcttcaaaattgacaatgggggtgaaattctctatgttgctggctttttaacca |
37749 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccctct |
351 |
Q |
| |
|
||||||||||||||||||| ||| ||||| |
|
|
| T |
37750 |
tttcgaacacagctttctgtttaacctct |
37778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 24 - 341
Target Start/End: Complemental strand, 11811 - 11493
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||| ||||| |||||||||||||| || |||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||||| || |
|
|
| T |
11811 |
tcattgaagtatctggtttttcaaacacagcatgttgttcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcgtc |
11712 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||| |||||||| | ||| |||| ||| ||||||||||||||||||| ||||||| || |||||||| || || || || ||||| ||||||||| |
|
|
| T |
11711 |
aacgaagtcactttcaacttcattaacttccgactgaacgtcgtattccacaggtaggattgagaccacattgcatacgatatcaagactggggtcagat |
11612 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
11611 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttataattgacaatgggggtgagattctctctgttgctggttttttaacca |
11512 |
T |
|
| Q |
323 |
tttcgaacacagctttctg |
341 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
11511 |
tttcgaatacagctttctg |
11493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 24 - 326
Target Start/End: Complemental strand, 67306 - 67003
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||| ||||| |||||||| |||||||||| || |
|
|
| T |
67306 |
tcatcgaagcgtctggtttttcaaagacaacatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtc |
67207 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|||||| |||||||| | ||| |||| |||| ||||||||||||||||||| ||||||| || |||||||| || ||||| |||||||| ||||||||| |
|
|
| T |
67206 |
gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacaggtaggattgagaccacattgcatactatatcgagactggggtcagat |
67107 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| | ||||| |
|
|
| T |
67106 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaacca |
67007 |
T |
|
| Q |
323 |
tttc |
326 |
Q |
| |
|
|||| |
|
|
| T |
67006 |
tttc |
67003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 24 - 344
Target Start/End: Original strand, 5395 - 5716
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||| | |||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||||| ||||| |||||||| |||||||||| || |
|
|
| T |
5395 |
tcatcgaggcgtctggtttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtc |
5494 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|||||| |||||||| | ||| |||| |||| ||||||||||||||||||| |||| || || |||||||| || ||||| |||||||| ||||||||| |
|
|
| T |
5495 |
gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacaggtagaattgagaccacattgcatactatatcgagactggggtcagat |
5594 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| | ||||| |
|
|
| T |
5595 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaacca |
5694 |
T |
|
| Q |
323 |
tttcgaacacagctttctgctt |
344 |
Q |
| |
|
|||| || ||| || ||||||| |
|
|
| T |
5695 |
tttcaaatacaactctctgctt |
5716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 24 - 349
Target Start/End: Original strand, 126617 - 126943
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||| ||||| |||||||||||||| || || ||||| |||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||||| || |
|
|
| T |
126617 |
tcattgaagtatctggtttttcaaatacggcgtgttgttcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcgtc |
126716 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|| ||| |||||||| | |||||||| ||| ||| ||||||||||||||| ||||||| || |||||||| || || || || ||||| ||||||||| |
|
|
| T |
126717 |
gatgaagtcactttcaacttcgttaacttccgactaaacgtcgtattccacaggtaggatcgagaccacattgcatacgatatcaagactggggtcagat |
126816 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
|| |||||||||||||||||||| |||||||| ||||||||||||||||| || ||| |||||||||| ||||||||||| |||| |||||| ||||||| |
|
|
| T |
126817 |
cccgtgaaatttgaagtcatttcttcatcctcattgggatgatctttctttaaaattcacaatgggggtgagattctctctgttgttggttttttaacca |
126916 |
T |
|
| Q |
323 |
tttcgaacacagctttctgcttaccct |
349 |
Q |
| |
|
|||||||||| ||||||||||| |||| |
|
|
| T |
126917 |
tttcgaacaccgctttctgctttccct |
126943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 158; Significance: 6e-84; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 24 - 344
Target Start/End: Original strand, 138830 - 139151
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||| |||||| ||||| |||||||| | |||||||| || |
|
|
| T |
138830 |
tcatcgaagtgtctggcttttcaaagacagcatgttgttcttctacacaactattattcatgacataataacatagtggcttgtgtgtcgccatttcgtc |
138929 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|||||| |||||||| | ||| |||| |||| |||||||||||||||| || ||||||| ||| ||||||| || ||||||||||||||||||||||| |
|
|
| T |
138930 |
gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattctacaggtaggattgaaaccacattgcatactatgtcgagactagggtcagac |
139029 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||||||||||| || || ||||| |||| ||||||||||| ||||||| |
|
|
| T |
139030 |
ccagtgaaattcgaagtcatttcttcatcctctttgggatggtctttctttaagattgacaagggaggtgagatcctctttgttgctggttttttaacca |
139129 |
T |
|
| Q |
323 |
tttcgaacacagctttctgctt |
344 |
Q |
| |
|
||||||| |||||| ||||||| |
|
|
| T |
139130 |
tttcgaatacagctctctgctt |
139151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 151; Significance: 8e-80; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 47 - 344
Target Start/End: Original strand, 22805718 - 22806016
Alignment:
| Q |
47 |
aagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccatttcgt |
146 |
Q |
| |
|
||||| |||||||| |||||||||||||| |||||||||| |||||| ||||| |||||||| |||||||||| ||||||| |||||||| | ||| | |
|
|
| T |
22805718 |
aagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcgacgatgtcactttcaacttcat |
22805817 |
T |
|
| Q |
147 |
taatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttc |
245 |
Q |
| |
|
||| |||| ||||||||||||||||||| ||||||| || |||||||| || ||||| |||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
22805818 |
taacttctgactgaacgtcgtattccacaggtaggattgagaccacattgcatactatatcgagattggggtcagatccagtgaaatttgaagtcatttc |
22805917 |
T |
|
| Q |
246 |
ctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgctt |
344 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||||||||| || |||||| ||||||| |
|
|
| T |
22805918 |
ttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcaaatacagctctctgctt |
22806016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 350
Target Start/End: Original strand, 41380418 - 41380507
Alignment:
| Q |
261 |
atgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgcttaccctc |
350 |
Q |
| |
|
||||||||||||||| |||||||||||||| || |||| ||| |||||||| ||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
41380418 |
atgatctttcttcaaaattgacaatgggggtgaaattcgctctgttgctggcttcttaaccatctcgaacacagctttctgcttgccctc |
41380507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 174
Target Start/End: Original strand, 41380255 - 41380405
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||| | ||||| ||||| || || |||||||| ||||| ||||| || |||||||||| ||||||||| || || |||||| ||||||| ||||| |
|
|
| T |
41380255 |
tcatcgaaatatctggcttttcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcacagtggtttgtgagttgccatctcatc |
41380354 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccac |
174 |
Q |
| |
|
|||||| |||||||| | ||| ||||||| | |||| || ||||||||||| |
|
|
| T |
41380355 |
gacgaagtcactttcgacttcattaatttttgactggacatcgtattccac |
41380405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 22508072 - 22508100
Alignment:
| Q |
224 |
cagtgaaatttgaagtcatttcctcatcc |
252 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22508072 |
cagtgaaatttgaagtcatttcctcatcc |
22508100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 146; Significance: 8e-77; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 24 - 336
Target Start/End: Complemental strand, 5378 - 5065
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||| ||||| |||||||| |||||||||| |||||| ||||| ||||| || | |||||||| || |
|
|
| T |
5378 |
tcatcgaagcatctggtttttcaaagacagcatgttgttcttccacacaaccattattcatgacataataacatagtggcttatgcgtagccatttcgtc |
5279 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
||||| |||||||| | ||| |||| |||| || |||||||||||||||| |||| || || |||||||| || |||||||||||||| |||||||| |
|
|
| T |
5278 |
aacgaagtcactttcaacttcattaacttctgacagaacgtcgtattccacaggtagaattgataccacattgcatactatgtcgagactgaggtcagat |
5179 |
T |
|
| Q |
223 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
322 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| |||||||| || ||||||| |
|
|
| T |
5178 |
ccagtgaaattcgaagtcatttcttcatcctccttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggctttttaacca |
5079 |
T |
|
| Q |
323 |
tttcgaacacagct |
336 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
5078 |
tttcgaaaacagct |
5065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 69781 - 69632
Alignment:
| Q |
24 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc |
123 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||| | | ||||||||| ||||||||||||| |
|
|
| T |
69781 |
tcatcgaagtatctggtttttcgaagactggatgttgctcttctacacaaccattattcatgacataatagtacaatggcttgtgagttgccatttcatc |
69682 |
T |
|
| Q |
124 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattcca |
173 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||| |||||||||| |
|
|
| T |
69681 |
gacgaaatcactttccacttcgttaatttctgactgaacatcgtattcca |
69632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 35 - 337
Target Start/End: Complemental strand, 14766 - 14463
Alignment:
| Q |
35 |
tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac |
134 |
Q |
| |
|
|||||| |||||||||| |||||||| || || ||||| || || ||||||| ||||||||||| ||||| || | |||||||| |||| ||| |||| |
|
|
| T |
14766 |
tctggtctttcaaagacagcatgttgttcctcaacacagccattgttcatgacataatagcataatggcttatgggtggccatttcgtcgatgaagtcac |
14667 |
T |
|
| Q |
135 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatt |
233 |
Q |
| |
|
|||| | ||| |||| |||| ||||||||||||||||||| | | | || || ||||| || | ||| |||||||| |||| ||||||||||||||| |
|
|
| T |
14666 |
tttcaacttcattaacttctgactgaacgtcgtattccacaggcaaaactgacacgacattgcatattatatcgagactggggttagatccagtgaaatt |
14567 |
T |
|
| Q |
234 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacaca |
333 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| ||||||| ||||| || || || |||||||| ||||| |||||||| |||||||||||||| ||| |
|
|
| T |
14566 |
cgaagtcatttcttcatcctccttaggatgatctctcttcaaaattgataagggaggggagattctttccgtggctggttttttaaccatttcgaaaaca |
14467 |
T |
|
| Q |
334 |
gctt |
337 |
Q |
| |
|
|||| |
|
|
| T |
14466 |
gctt |
14463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 187 - 344
Target Start/End: Original strand, 159086 - 159243
Alignment:
| Q |
187 |
accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatg |
286 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||| || | |
|
|
| T |
159086 |
accacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggtttttcttcaagattgataagg |
159185 |
T |
|
| Q |
287 |
ggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgctt |
344 |
Q |
| |
|
| || |||||||| || |||||||| || ||||||||||| || || ||||||||||| |
|
|
| T |
159186 |
gcggtgagattctttctgttgctggctttttaaccatttcaaaaacggctttctgctt |
159243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 217 - 344
Target Start/End: Complemental strand, 2001 - 1874
Alignment:
| Q |
217 |
tcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttct |
316 |
Q |
| |
|
||||| ||||||||||| ||||||||||| ||||||| ||||||||| |||||||| ||||||||||| ||||| ||||||||||| ||||||||||| | |
|
|
| T |
2001 |
tcagacccagtgaaattcgaagtcatttcttcatcctacttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggttttt |
1902 |
T |
|
| Q |
317 |
taaccatttcgaacacagctttctgctt |
344 |
Q |
| |
|
||||||||||||| |||||| ||||||| |
|
|
| T |
1901 |
taaccatttcgaaaacagctctctgctt |
1874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 35 - 222
Target Start/End: Complemental strand, 4461 - 4273
Alignment:
| Q |
35 |
tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac |
134 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||| |||||||||| |||||| ||||| |||||||| |||||||||| || ||||| |||| |
|
|
| T |
4461 |
tctggcttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcaacgaagtcac |
4362 |
T |
|
| Q |
135 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
222 |
Q |
| |
|
|||| | ||| |||| |||| | ||||| ||||||||||| ||||||| || ||| |||| || |||||||||||||| ||||||||| |
|
|
| T |
4361 |
tttcaacttcattaacttctgattgaacttcgtattccacatgtaggattgataccgcattgcatactatgtcgagactggggtcagat |
4273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 35 - 281
Target Start/End: Complemental strand, 33874 - 33627
Alignment:
| Q |
35 |
tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac |
134 |
Q |
| |
|
||||||| |||||| || |||||||| ||||| ||||| || || ||||||| ||||||||||| ||||| || | |||||||| ||| ||| |||| |
|
|
| T |
33874 |
tctggttattcaaaaacagcatgttgttcttcaacacagccattgttcatgacataatagcataatggcttatgtgtcgccatttcgtcggtgaagtcac |
33775 |
T |
|
| Q |
135 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatt |
233 |
Q |
| |
|
|||| | ||| |||| || ||||||| ||||||||||| | | | || |||||||| ||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
33774 |
tttcaacttcattaactttcgactgaacatcgtattccacaggcaaaactgacaccacattgcacactatgtcgagactggggtcagatccaatgaaatt |
33675 |
T |
|
| Q |
234 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattga |
281 |
Q |
| |
|
||||||||||| |||||||| |||||||| ||||||||||||||||| |
|
|
| T |
33674 |
cgaagtcatttcttcatcctctttgggatggtctttcttcaagattga |
33627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 65376 - 65268
Alignment:
| Q |
236 |
aagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagc |
335 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| | |
|
|
| T |
65376 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
65277 |
T |
|
| Q |
336 |
tttctgctt |
344 |
Q |
| |
|
||||||||| |
|
|
| T |
65276 |
tttctgctt |
65268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 74554 - 74446
Alignment:
| Q |
236 |
aagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagc |
335 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| | |
|
|
| T |
74554 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
74455 |
T |
|
| Q |
336 |
tttctgctt |
344 |
Q |
| |
|
||||||||| |
|
|
| T |
74454 |
tttctgctt |
74446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 323
Target Start/End: Complemental strand, 75661 - 75405
Alignment:
| Q |
68 |
acacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaatttctaactgaacgtcgt |
167 |
Q |
| |
|
|||||||| || ||||| | |||||||||||| ||||| || || |||||||||||| ||||||||||| | |||||||| ||| | ||||||| | |
|
|
| T |
75661 |
acacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacctcttaaggaacgtcat |
75562 |
T |
|
| Q |
168 |
attccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatc |
266 |
Q |
| |
|
|||| | | | | || |||||||| || ||||| |||||||| | ||||||| | ||||||||||| |||||||| |||||||| || ||||| || |
|
|
| T |
75561 |
attcaataggcaatactgataccacattgcatactatatcgagacttgagtcagattctgtgaaatttgacgtcatttcttcatcctctttaggatggtc |
75462 |
T |
|
| Q |
267 |
tttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccat |
323 |
Q |
| |
|
||||||||| ||||| || || || |||||||| ||||| |||||||| |||||||| |
|
|
| T |
75461 |
tttcttcaaaattgataaaggaggggagattctttccgtggctggttttttaaccat |
75405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 323
Target Start/End: Complemental strand, 84105 - 83834
Alignment:
| Q |
53 |
gcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaattt |
152 |
Q |
| |
|
|||||||| |||| |||||||| || ||||| | |||||||||||| ||||| || || |||||||||||| ||||||||||| | |||||||| | |
|
|
| T |
84105 |
gcatgttgatctttgacacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacct |
84006 |
T |
|
| Q |
153 |
ctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatc |
251 |
Q |
| |
|
|| | ||||||| ||||| | | | | || |||||||| || ||||| |||||||| ||||||||| | ||||||||||| ||||||| ||||| |
|
|
| T |
84005 |
cttaaggaacgtcatattcaataggcaatactgataccacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatc |
83906 |
T |
|
| Q |
252 |
ctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccat |
323 |
Q |
| |
|
||| || | ||| ||||||||||| ||||| || || || |||||||| ||||| |||||||| ||||||| |
|
|
| T |
83905 |
ctctttagtatggtctttcttcaaaattgataaaggaggggagattctttccgtggctggttttataaccat |
83834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 323
Target Start/End: Complemental strand, 121777 - 121506
Alignment:
| Q |
53 |
gcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaattt |
152 |
Q |
| |
|
|||||||| |||| |||||||| || ||||| | |||||||||||| ||||| || || |||||||||||| ||||||||||| | |||||||| | |
|
|
| T |
121777 |
gcatgttgatctttgacacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacct |
121678 |
T |
|
| Q |
153 |
ctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatc |
251 |
Q |
| |
|
|| | ||||||| ||||| | | | | || |||||||| || ||||| |||||||| ||||||||| | ||||||||||| ||||||| ||||| |
|
|
| T |
121677 |
cttaaggaacgtcatattcaataggcaatactgataccacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatc |
121578 |
T |
|
| Q |
252 |
ctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccat |
323 |
Q |
| |
|
||| || | ||| ||||||||||| ||||| || || || |||||||| ||||| |||||||| ||||||| |
|
|
| T |
121577 |
ctctttagtatggtctttcttcaaaattgataaaggaggggagattctttccgtggctggttttataaccat |
121506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 281
Target Start/End: Original strand, 42285 - 42379
Alignment:
| Q |
187 |
accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattga |
281 |
Q |
| |
|
|||||||| |||||||| |||||||| || |||||| |||||||||| || |||||||| ||||||||||| ||||||| ||||||||| ||||| |
|
|
| T |
42285 |
accacattgcacactatatcgagacttggatcagattcagtgaaattcgacgtcatttcttcatcctccttaggatgatttttcttcaaaattga |
42379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 275
Target Start/End: Original strand, 48913 - 48987
Alignment:
| Q |
201 |
tatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaa |
275 |
Q |
| |
|
|||||||||||| ||||||||| ||| ||| || || |||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
48913 |
tatgtcgagacttgggtcagattcagagaagttcgacgtcatttcttcatcctcctttggatgatctttcttcaa |
48987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0423 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0423
Description:
Target: scaffold0423; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 338
Target Start/End: Complemental strand, 5228 - 5125
Alignment:
| Q |
235 |
gaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacag |
334 |
Q |
| |
|
||||||||||| |||||| | |||||||| |||||||| ||||||| || || || |||||||| |||| |||| | || |||||||||||||| |||| |
|
|
| T |
5228 |
gaagtcatttcttcatccactttgggatggtctttcttagagattgataagggaggtgagattctttccgctgctagctttttaaccatttcgaaaacag |
5129 |
T |
|
| Q |
335 |
cttt |
338 |
Q |
| |
|
|||| |
|
|
| T |
5128 |
cttt |
5125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 127000 - 127110
Alignment:
| Q |
34 |
gtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatca |
133 |
Q |
| |
|
||||||| |||| || || || ||||| ||||| |||| ||| |||||||| | ||||||||||| ||||| ||||| ||||||||||| ||||||| |
|
|
| T |
127000 |
gtctggtctttcgaatacggcgtgttgatcttcaacaccaccattattcataacataatagcataatggcttatgaatcgccatttcatcagtgaaatca |
127099 |
T |
|
| Q |
134 |
ctttccatttc |
144 |
Q |
| |
|
||||| ||||| |
|
|
| T |
127100 |
ctttctatttc |
127110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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