View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0652_low_14 (Length: 370)

Name: NF0652_low_14
Description: NF0652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0652_low_14
NF0652_low_14
[»] chr3 (44 HSPs)
chr3 (128-370)||(31415334-31415576)
chr3 (163-370)||(31224669-31224876)
chr3 (161-370)||(15447713-15447919)
chr3 (161-363)||(49969965-49970178)
chr3 (161-280)||(6808157-6808276)
chr3 (161-271)||(11912950-11913060)
chr3 (161-369)||(20630193-20630411)
chr3 (190-271)||(40812015-40812096)
chr3 (169-266)||(49389772-49389870)
chr3 (169-266)||(1988953-1989050)
chr3 (161-266)||(18439943-18440047)
chr3 (169-271)||(5841958-5842061)
chr3 (210-305)||(18439845-18439940)
chr3 (186-271)||(30175304-30175389)
chr3 (185-305)||(12269598-12269718)
chr3 (199-271)||(40807173-40807245)
chr3 (169-271)||(12269486-12269587)
chr3 (321-370)||(17693208-17693258)
chr3 (199-271)||(22307386-22307458)
chr3 (210-281)||(1465419-1465490)
chr3 (317-370)||(17519823-17519877)
chr3 (317-370)||(17534685-17534739)
chr3 (321-370)||(22307505-22307555)
chr3 (321-370)||(30175436-30175486)
chr3 (321-370)||(40807076-40807126)
chr3 (321-370)||(41173241-41173291)
chr3 (321-369)||(1465675-1465724)
chr3 (199-271)||(17538284-17538356)
chr3 (210-305)||(49389639-49389734)
chr3 (325-370)||(5214998-5215044)
chr3 (321-370)||(17538187-17538237)
chr3 (325-370)||(13516474-13516519)
chr3 (333-370)||(17519784-17519821)
chr3 (333-370)||(17534646-17534683)
chr3 (333-370)||(40811891-40811928)
chr3 (333-370)||(52466429-52466466)
chr3 (321-370)||(5206524-5206575)
chr3 (331-370)||(12269376-12269415)
chr3 (331-370)||(15932387-15932426)
chr3 (321-370)||(5841861-5841911)
chr3 (331-369)||(23413560-23413598)
chr3 (331-369)||(45796939-45796977)
chr3 (187-271)||(1465531-1465616)
chr3 (222-251)||(12852390-12852419)
[»] chr7 (38 HSPs)
chr7 (128-370)||(38480167-38480409)
chr7 (163-370)||(36685965-36686172)
chr7 (163-370)||(30820971-30821178)
chr7 (161-280)||(9320442-9320561)
chr7 (161-280)||(11085019-11085138)
chr7 (161-280)||(11092757-11092876)
chr7 (161-271)||(15213728-15213838)
chr7 (161-369)||(8468243-8468452)
chr7 (161-369)||(14270140-14270349)
chr7 (161-369)||(45847736-45847945)
chr7 (161-263)||(15439322-15439424)
chr7 (161-271)||(17232537-17232646)
chr7 (163-266)||(37727642-37727745)
chr7 (199-271)||(12371455-12371527)
chr7 (199-271)||(13148275-13148347)
chr7 (210-305)||(9389705-9389800)
chr7 (169-271)||(11391898-11392001)
chr7 (190-271)||(8851959-8852040)
chr7 (321-370)||(59314-59364)
chr7 (321-370)||(8852087-8852137)
chr7 (321-370)||(11066548-11066598)
chr7 (321-370)||(12371358-12371408)
chr7 (199-271)||(11066645-11066717)
chr7 (331-370)||(12128097-12128136)
chr7 (210-305)||(17232649-17232744)
chr7 (321-370)||(32434511-32434561)
chr7 (321-369)||(9389961-9390010)
chr7 (333-370)||(46386997-46387034)
chr7 (333-370)||(48811981-48812018)
chr7 (331-370)||(14183562-14183601)
chr7 (321-370)||(11392048-11392098)
chr7 (321-370)||(13150467-13150517)
chr7 (331-369)||(17232428-17232466)
chr7 (325-370)||(18075455-18075500)
chr7 (222-251)||(39267712-39267741)
chr7 (229-281)||(8468472-8468524)
chr7 (199-271)||(12127967-12128039)
chr7 (202-262)||(32434396-32434456)
[»] chr8 (23 HSPs)
chr8 (161-370)||(21579919-21580129)
chr8 (161-370)||(29763581-29763789)
chr8 (169-370)||(41680843-41681043)
chr8 (169-280)||(32807285-32807396)
chr8 (161-271)||(42560240-42560350)
chr8 (171-321)||(18760514-18760664)
chr8 (238-363)||(22965686-22965811)
chr8 (161-369)||(38550087-38550305)
chr8 (161-369)||(27472392-27472610)
chr8 (161-369)||(39833792-39834012)
chr8 (161-266)||(1327121-1327225)
chr8 (230-370)||(6102532-6102683)
chr8 (199-271)||(39936813-39936885)
chr8 (169-228)||(3273212-3273270)
chr8 (332-370)||(2418971-2419009)
chr8 (188-266)||(20982747-20982825)
chr8 (331-369)||(20982901-20982939)
chr8 (321-370)||(39936932-39936982)
chr8 (196-267)||(21415211-21415281)
chr8 (331-370)||(24713301-24713340)
chr8 (332-366)||(35026960-35026994)
chr8 (321-370)||(39695406-39695455)
chr8 (199-247)||(19139966-19140014)
[»] chr5 (23 HSPs)
chr5 (163-370)||(21557760-21557967)
chr5 (161-370)||(12122234-12122443)
chr5 (163-370)||(21555094-21555302)
chr5 (163-370)||(31455620-31455830)
chr5 (163-370)||(31455007-31455217)
chr5 (162-366)||(30615690-30615893)
chr5 (183-370)||(17875144-17875331)
chr5 (161-281)||(24212387-24212507)
chr5 (161-280)||(35852643-35852762)
chr5 (161-271)||(36460199-36460309)
chr5 (161-281)||(5889125-5889245)
chr5 (165-369)||(29915173-29915387)
chr5 (161-266)||(5889271-5889375)
chr5 (321-370)||(23200434-23200483)
chr5 (192-268)||(21871687-21871763)
chr5 (192-268)||(21875967-21876043)
chr5 (226-302)||(21741557-21741633)
chr5 (317-347)||(12122445-12122475)
chr5 (332-370)||(25743706-25743744)
chr5 (187-271)||(21741653-21741738)
chr5 (222-251)||(21871593-21871622)
chr5 (222-251)||(21875873-21875902)
chr5 (222-251)||(22120217-22120246)
[»] scaffold1351 (1 HSPs)
scaffold1351 (161-370)||(1496-1705)
[»] chr6 (24 HSPs)
chr6 (161-370)||(20734160-20734368)
chr6 (161-280)||(2201139-2201258)
chr6 (161-280)||(22420987-22421106)
chr6 (161-271)||(34296982-34297092)
chr6 (163-363)||(19399684-19399895)
chr6 (161-281)||(27851220-27851341)
chr6 (161-305)||(25956570-25956714)
chr6 (169-271)||(18927853-18927954)
chr6 (161-266)||(25956717-25956821)
chr6 (161-369)||(27850984-27851193)
chr6 (161-266)||(31630623-31630727)
chr6 (199-271)||(27322221-27322293)
chr6 (169-271)||(28708651-28708754)
chr6 (199-271)||(18708677-18708749)
chr6 (199-271)||(23151069-23151141)
chr6 (321-370)||(17318992-17319042)
chr6 (321-370)||(18708580-18708630)
chr6 (331-370)||(31733794-31733833)
chr6 (321-370)||(23151188-23151238)
chr6 (325-370)||(31733841-31733887)
chr6 (321-370)||(19829827-19829876)
chr6 (321-366)||(27573027-27573072)
chr6 (331-370)||(27323551-27323590)
chr6 (321-370)||(28708554-28708604)
[»] scaffold0737 (4 HSPs)
scaffold0737 (161-370)||(6391-6599)
scaffold0737 (331-370)||(5593-5632)
scaffold0737 (317-370)||(5634-5688)
scaffold0737 (331-370)||(5758-5797)
[»] scaffold0071 (1 HSPs)
scaffold0071 (161-370)||(14270-14479)
[»] chr2 (22 HSPs)
chr2 (161-370)||(22500919-22501128)
chr2 (161-370)||(22508853-22509062)
chr2 (161-370)||(24865483-24865692)
chr2 (161-346)||(7672271-7672450)
chr2 (169-370)||(6576293-6576505)
chr2 (161-245)||(2524442-2524526)
chr2 (188-271)||(24883630-24883713)
chr2 (183-255)||(22501128-22501200)
chr2 (183-255)||(22509062-22509134)
chr2 (169-271)||(24436221-24436321)
chr2 (199-271)||(24781643-24781715)
chr2 (321-370)||(5032246-5032296)
chr2 (317-370)||(9975005-9975059)
chr2 (321-370)||(24436124-24436174)
chr2 (321-370)||(24781762-24781812)
chr2 (199-271)||(5032127-5032199)
chr2 (321-370)||(22689760-22689810)
chr2 (321-370)||(22694356-22694406)
chr2 (332-370)||(24883542-24883580)
chr2 (333-370)||(9975061-9975098)
chr2 (333-370)||(21367926-21367963)
chr2 (321-370)||(25045130-25045179)
[»] scaffold0395 (1 HSPs)
scaffold0395 (161-370)||(10825-11034)
[»] chr4 (33 HSPs)
chr4 (161-362)||(33186040-33186241)
chr4 (161-280)||(15880717-15880836)
chr4 (161-369)||(362062-362271)
chr4 (161-305)||(13844567-13844711)
chr4 (169-271)||(9923326-9923427)
chr4 (169-271)||(11479432-11479533)
chr4 (161-266)||(52873253-52873357)
chr4 (185-305)||(46642862-46642982)
chr4 (169-271)||(35812211-35812312)
chr4 (161-271)||(46642750-46642859)
chr4 (161-265)||(13844461-13844564)
chr4 (161-268)||(15868796-15868901)
chr4 (162-268)||(630862-630966)
chr4 (317-370)||(10357358-10357412)
chr4 (210-278)||(15190360-15190428)
chr4 (321-370)||(10357306-10357356)
chr4 (321-370)||(19609404-19609454)
chr4 (186-267)||(21189762-21189842)
chr4 (210-278)||(15099393-15099461)
chr4 (199-263)||(19609509-19609573)
chr4 (331-370)||(15042060-15042099)
chr4 (331-370)||(15112325-15112364)
chr4 (331-369)||(15869022-15869060)
chr4 (331-369)||(19857389-19857427)
chr4 (187-369)||(15099156-15099349)
chr4 (169-208)||(14185252-14185291)
chr4 (331-369)||(32851153-32851191)
chr4 (321-370)||(35812359-35812409)
chr4 (222-251)||(630796-630825)
chr4 (222-251)||(13812831-13812860)
chr4 (222-251)||(15868731-15868760)
chr4 (333-370)||(27995888-27995925)
chr4 (321-370)||(32467169-32467218)
[»] chr1 (32 HSPs)
chr1 (161-370)||(51274301-51274510)
chr1 (161-266)||(12328568-12328673)
chr1 (161-305)||(28194398-28194542)
chr1 (161-250)||(8885447-8885536)
chr1 (169-251)||(51326892-51326974)
chr1 (169-301)||(43697405-43697537)
chr1 (210-305)||(49261357-49261452)
chr1 (161-255)||(28194545-28194638)
chr1 (161-266)||(43543031-43543135)
chr1 (216-305)||(20636866-20636955)
chr1 (161-266)||(43697294-43697398)
chr1 (161-266)||(46382653-46382755)
chr1 (190-271)||(48301040-48301121)
chr1 (288-369)||(41305818-41305901)
chr1 (321-370)||(48300943-48300993)
chr1 (321-369)||(35981952-35982001)
chr1 (332-370)||(20634508-20634546)
chr1 (332-370)||(41227628-41227666)
chr1 (331-369)||(46382831-46382869)
chr1 (333-370)||(11809420-11809457)
chr1 (198-271)||(20636764-20636837)
chr1 (240-280)||(8882176-8882216)
chr1 (210-305)||(35981696-35981791)
chr1 (199-270)||(41227507-41227578)
chr1 (321-370)||(20587810-20587860)
chr1 (321-370)||(20592348-20592398)
chr1 (324-369)||(43542917-43542963)
chr1 (321-370)||(1642566-1642615)
chr1 (321-370)||(8276868-8276917)
chr1 (333-370)||(23073077-23073114)
chr1 (321-370)||(24726451-24726500)
chr1 (187-271)||(35981808-35981893)
[»] scaffold0815 (1 HSPs)
scaffold0815 (173-334)||(450-611)
[»] scaffold0599 (2 HSPs)
scaffold0599 (161-271)||(4644-4754)
scaffold0599 (161-271)||(226-336)
[»] scaffold0434 (1 HSPs)
scaffold0434 (161-271)||(6772-6882)
[»] scaffold0116 (3 HSPs)
scaffold0116 (161-305)||(43733-43877)
scaffold0116 (161-305)||(47653-47797)
scaffold0116 (161-266)||(43880-43984)
[»] scaffold0080 (2 HSPs)
scaffold0080 (169-280)||(59327-59437)
scaffold0080 (321-370)||(59475-59525)
[»] scaffold0009 (3 HSPs)
scaffold0009 (161-268)||(85167-85273)
scaffold0009 (210-305)||(85276-85371)
scaffold0009 (324-369)||(85055-85101)
[»] scaffold0100 (1 HSPs)
scaffold0100 (161-266)||(36144-36248)
[»] scaffold0061 (3 HSPs)
scaffold0061 (169-277)||(15448-15556)
scaffold0061 (169-277)||(24506-24614)
scaffold0061 (325-370)||(19320-19366)
[»] scaffold0810 (1 HSPs)
scaffold0810 (168-266)||(2966-3063)
[»] scaffold0335 (1 HSPs)
scaffold0335 (169-271)||(834-935)
[»] scaffold0371 (2 HSPs)
scaffold0371 (169-271)||(3093-3194)
scaffold0371 (320-370)||(2996-3047)
[»] scaffold0513 (1 HSPs)
scaffold0513 (161-266)||(10965-11069)
[»] scaffold0004 (2 HSPs)
scaffold0004 (161-266)||(362926-363030)
scaffold0004 (324-369)||(362812-362858)
[»] scaffold0802 (1 HSPs)
scaffold0802 (169-271)||(5478-5579)
[»] scaffold0134 (2 HSPs)
scaffold0134 (199-271)||(10029-10101)
scaffold0134 (323-370)||(10150-10198)
[»] scaffold1137 (3 HSPs)
scaffold1137 (210-305)||(2300-2395)
scaffold1137 (321-369)||(2556-2605)
scaffold1137 (198-269)||(2424-2495)
[»] scaffold0679 (2 HSPs)
scaffold0679 (169-271)||(2449-2552)
scaffold0679 (321-370)||(2599-2649)
[»] scaffold0375 (2 HSPs)
scaffold0375 (200-271)||(9106-9177)
scaffold0375 (321-370)||(9224-9274)
[»] scaffold0001 (2 HSPs)
scaffold0001 (169-271)||(76919-77019)
scaffold0001 (332-370)||(76831-76869)
[»] scaffold0632 (1 HSPs)
scaffold0632 (325-370)||(299-344)
[»] scaffold0384 (2 HSPs)
scaffold0384 (199-271)||(8189-8261)
scaffold0384 (321-370)||(8308-8358)
[»] scaffold0509 (2 HSPs)
scaffold0509 (321-370)||(9680-9730)
scaffold0509 (199-271)||(9561-9633)
[»] scaffold0026 (1 HSPs)
scaffold0026 (321-370)||(145867-145917)
[»] scaffold0639 (1 HSPs)
scaffold0639 (331-370)||(7587-7626)
[»] scaffold0507 (1 HSPs)
scaffold0507 (331-370)||(2769-2808)
[»] scaffold0075 (2 HSPs)
scaffold0075 (161-268)||(8381-8486)
scaffold0075 (331-369)||(8608-8646)
[»] scaffold1792 (1 HSPs)
scaffold1792 (331-369)||(202-240)
[»] scaffold0230 (1 HSPs)
scaffold0230 (331-369)||(23660-23698)
[»] scaffold0064 (1 HSPs)
scaffold0064 (321-370)||(57880-57930)
[»] scaffold0040 (2 HSPs)
scaffold0040 (322-370)||(11122-11170)
scaffold0040 (322-370)||(22222-22270)
[»] scaffold0586 (1 HSPs)
scaffold0586 (196-267)||(1920-1990)
[»] scaffold0321 (1 HSPs)
scaffold0321 (320-370)||(879-929)
[»] scaffold0235 (2 HSPs)
scaffold0235 (331-369)||(13334-13372)
scaffold0235 (331-369)||(25035-25073)
[»] scaffold0124 (2 HSPs)
scaffold0124 (192-266)||(24770-24844)
scaffold0124 (222-251)||(24676-24705)
[»] scaffold0045 (1 HSPs)
scaffold0045 (321-370)||(46941-46991)
[»] scaffold0035 (1 HSPs)
scaffold0035 (331-369)||(106372-106410)
[»] scaffold0439 (1 HSPs)
scaffold0439 (325-370)||(11295-11340)
[»] scaffold0379 (2 HSPs)
scaffold0379 (325-370)||(4668-4713)
scaffold0379 (325-370)||(14714-14759)
[»] scaffold0192 (1 HSPs)
scaffold0192 (222-251)||(9926-9955)
[»] scaffold0149 (1 HSPs)
scaffold0149 (325-370)||(20776-20821)
[»] scaffold0142 (1 HSPs)
scaffold0142 (222-251)||(7670-7699)
[»] scaffold0002 (1 HSPs)
scaffold0002 (321-370)||(397621-397670)


Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 128 - 370
Target Start/End: Complemental strand, 31415576 - 31415334
Alignment:
Q  128 gagatgaaccaagaagagagagagctgctgatcgatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaa 227  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  31415576 gagaagaaccaagaagagagagagctgctgatcgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 31415477  T
Q  228 ttgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaag 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  31415476 ttgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaag 31415377  T
Q  328 ttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  31415376 ttgttaagttgtaagatgttgatccaaattattggagtcatat 31415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 163 - 370
Target Start/End: Original strand, 31224669 - 31224876
Alignment:
Q  163 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgactt 262  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31224669 tttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgactt 31224768  T
Q  263 gctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattattgg 362  Q
    |||||||||||||||||||   | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  31224769 gctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtttaagttgttaagttgtaagatgttgatccaaattattgg 31224868  T
Q  363 agtcatat 370  Q
    ||||||||    
T  31224869 agtcatat 31224876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 161 - 370
Target Start/End: Original strand, 15447713 - 15447919
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  15447713 gatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatatatga---ttattattgatggtgac 15447809  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    ||| |||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  15447810 ttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatattgatccaaattatt 15447909  T
Q  361 ggagtcatat 370  Q
    ||||||||||    
T  15447910 ggagtcatat 15447919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 161 - 363
Target Start/End: Original strand, 49969965 - 49970178
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||| |||||| ||||    
T  49969965 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgac 49970064  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagat----------gtctaagttg-ttaagttgtaagatgttaa 349  Q
    |||||||||||  || ||||  |||  ||||||||||||||| |||| || |||||||||          |||||||||| ||||||||||||||||| |    
T  49970065 ttgctgcatattatttaatggtactgccttgctgttgtgatgtattattatcattaagatgctaatgttggtctaagttgtttaagttgtaagatgttga 49970164  T
Q  350 tccaaattattgga 363  Q
    |||||| |||||||    
T  49970165 tccaaagtattgga 49970178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 6808276 - 6808157
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||    
T  6808276 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatataatgattattattgatggtgac 6808177  T
Q  261 ttgctgcatatgtttaaatg 280  Q
    || || ||||||| ||||||    
T  6808176 ttccttcatatgtctaaatg 6808157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 11913060 - 11912950
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||    
T  11913060 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgac 11912961  T
Q  261 ttgctgcatat 271  Q
    ||| |||||||    
T  11912960 ttgatgcatat 11912950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 369
Target Start/End: Original strand, 20630193 - 20630411
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    |||||||||||| |||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  20630193 gatttactttgacgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 20630291  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaga----------tgtctaagttg-ttaagttgtaagatgttaa 349  Q
    |||||| | ||  ||  |||    |  ||||||| ||||||| ||||||| ||||||||          ||| ||||||| ||||||||||||||||| |    
T  20630292 ttgctgtaaattatttgatgttgttgccttgctgatgtgatgtattaatatcattaagatgctaatgtttgtttaagttgtttaagttgtaagatgttga 20630391  T
Q  350 tccaaattattggagtcata 369  Q
    ||||||||||||||||||||    
T  20630392 tccaaattattggagtcata 20630411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 40812096 - 40812015
Alignment:
Q  190 atttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggttatatgggatgattattgttgatgttgacttgctgcatat 40812015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 49389772 - 49389870
Alignment:
Q  169 ttgatgattaaatgttaaaatattta--tatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctg 266  Q
    ||||||||||||||| ||||||||||  ||||||||||| |  |||| |||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  49389772 ttgatgattaaatgtgaaaatatttagatatattgtgaa-gttgttgatatgaagttgtaattgttatatttgatgattattgttgatgttgacttgctg 49389870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 1988953 - 1989050
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctg 266  Q
    ||||||||||||||| |||| || |||||| ||||||||  |||| |||||||||||||| ||| ||| ||||||||||| |||||| ||||||||||    
T  1988953 ttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgaagttgtaatggttgtatttgatgattattgttgatgttgacttgctg 1989050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 18439943 - 18440047
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||||| | || |||||||||||||| ||| ||| ||||||||||| |||||| ||||    
T  18439943 gatttactttgatgattaa-tgtgagaatatctatatattgtgaaagatgatgatatgaagttgtaatggttgtatttgatgattattgttgatgatgac 18440041  T
Q  261 ttgctg 266  Q
     |||||    
T  18440042 ctgctg 18440047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 5842061 - 5841958
Alignment:
Q  169 ttgatgattaaatgtta-aaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgc 267  Q
    |||||||||||||||   ||| ||||||||||||||||||| | |  || ||||||||||| ||||||| ||||||||||| |||||| |||||||||||    
T  5842061 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatatttgatgattattgttgatgttgacttgctgc 5841962  T
Q  268 atat 271  Q
    ||||    
T  5841961 atat 5841958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 305
Target Start/End: Original strand, 18439845 - 18439940
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||| |||| ||||| || |||||||||||| |||||||||||||||| ||||| || ||||||||||||||   | |||||||||||||||||||    
T  18439845 gttgatatgtagttgcaaatgttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 18439940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 30175304 - 30175389
Alignment:
Q  186 aaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    ||||||||||||| ||||||||| |||| |||||||||||||| | |||||  |||||||||| |||||| ||||||||| |||||    
T  30175304 aaatatttatatactgtgaaagatgttgatatgaagttgtaatggatatatgggatgattattgttgatgttgacttgcttcatat 30175389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 305
Target Start/End: Complemental strand, 12269718 - 12269598
Alignment:
Q  185 aaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacac 284  Q
    |||| ||||||||||||||||||  |||| |||||||||||| || ||| |||||| || |||||| | |||| ||||| || ||||||||||||||  |    
T  12269718 aaaagatttatatattgtgaaagttgttgatatgaagttgtattttttacatatgaagaatattatcggtggttacttgttgtatatgtttaaatgatgc 12269619  T
Q  285 tctcttgctgttgtgatgaat 305  Q
    |  ||||||||||| ||||||    
T  12269618 tgccttgctgttgtcatgaat 12269598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 40807245 - 40807173
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||||    
T  40807245 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 40807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 12269587 - 12269486
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||| ||| | || ||||||| ||| |||| ||||||| ||||||||||||||  |||||| ||||||||||| |||||| |||| |||||||    
T  12269587 ttgatgattaa-tgtgagaagatttataaattttgaaggacgttgatatgaagttgtaatgattatatttgatgattattgttgatgttgacgtgctgca 12269489  T
Q  269 tat 271  Q
    |||    
T  12269488 tat 12269486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 17693258 - 17693208
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17693258 gtctaagttgtttaagttgtaagatgttaatccaaattattggagtcatat 17693208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 22307386 - 22307458
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| ||||||||||||||  ||||||  |||||||||| |||||| |||||||||||||||    
T  22307386 ttgtgaaagatgttgatatgaagttgtaatgattatattggatgattattgttgatgttgacttgctgcatat 22307458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 281
Target Start/End: Original strand, 1465419 - 1465490
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatga 281  Q
    |||| |||||||||| |||||||||| |||| |||||||| ||||||| |||||||  ||||||||||||||    
T  1465419 gttgatatgaagttgaaattgttatacatgaagattattaatgatggttacttgctctatatgtttaaatga 1465490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 17519823 - 17519877
Alignment:
Q  317 agatgtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  17519823 agatgtctaagttgtttaagttataagatgttgatccaaattattggagtcatat 17519877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 17534685 - 17534739
Alignment:
Q  317 agatgtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  17534685 agatgtctaagttgtttaagttataagatgttgatccaaattattggagtcatat 17534739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 22307505 - 22307555
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  22307505 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 22307555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 30175436 - 30175486
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  30175436 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 30175486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 40807126 - 40807076
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  40807126 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 40807076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 41173241 - 41173291
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  41173241 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 41173291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 1465675 - 1465724
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  1465675 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcata 1465724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 17538356 - 17538284
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||| |  ||||||  |||||||||| |||||| |||||||||||||||    
T  17538356 ttgtgaaagatgttgatatgaagttgtattgattatattggatgattattgttgatgttgacttgctgcatat 17538284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 305
Target Start/End: Original strand, 49389639 - 49389734
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    ||||||||||||||| |||||||||| |||| ||| |||||| ||||  ||||  || ||||||||||||||   | ||||||||| |||||||||    
T  49389639 gttggtatgaagttgaaattgttatacatgaagatcattattaatgggtacttattgtatatgtttaaatgatgttgtcttgctgtcgtgatgaat 49389734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 5215044 - 5214998
Alignment:
Q  325 aagttgttaa-gttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  5215044 aagttgttaaagttgtaagatgttgatccaaattattggagtcatat 5214998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 17538237 - 17538187
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  17538237 gtctaagttgtttaagttgaaagatgttgatccaaattattggagtcatat 17538187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 13516519 - 13516474
Alignment:
Q  325 aagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||    
T  13516519 aagttgtcaagttgtaagattttgatccaaattattggagtcatat 13516474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 17519784 - 17519821
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  17519784 aagttgtaagatgttgatccaaattattggagtcatat 17519821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 17534646 - 17534683
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  17534646 aagttgtaagatgttgatccaaattattggagtcatat 17534683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 40811928 - 40811891
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40811928 aagttgtaagatgttgatccaaattattggagtcatat 40811891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 52466429 - 52466466
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  52466429 aagttgtaagatgttgatccaaattattggagtcatat 52466466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 5206524 - 5206575
Alignment:
Q  321 gtctaagttgtt--aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||  || |||||||||||| ||||||||||||||||||||||    
T  5206524 gtctaagttgtttaaatttgtaagatgttgatccaaattattggagtcatat 5206575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 12269415 - 12269376
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  12269415 ttaagttgtaaggtgttgatccaaattattggagtcatat 12269376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 15932387 - 15932426
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  15932387 ttaaattgtaagatgttgatccaaattattggagtcatat 15932426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 5841911 - 5841861
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| || ||||||||| || ||||||||||||||||||||||    
T  5841911 gtctaagttgtttaaattgtaagattttgatccaaattattggagtcatat 5841861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 23413560 - 23413598
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  23413560 ttaagttgtatgatgttgatccaaattattggagtcata 23413598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 45796977 - 45796939
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  45796977 ttaatttgtaagatgttgatccaaattattggagtcata 45796939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 1465531 - 1465616
Alignment:
Q  187 aatatttatata-ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||||| |||||||||| | |  |||||||| ||||| |||  || ||| ||||||| |||||| |||||||||||||||    
T  1465531 aatatttatataattgtgaaagatgcttatatgaagtcgtaatggttggatttgacgattattgttgatgttgacttgctgcatat 1465616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 12852390 - 12852419
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  12852390 ttgtaattgttatatatgatgattattatt 12852419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 128 - 370
Target Start/End: Complemental strand, 38480409 - 38480167
Alignment:
Q  128 gagatgaaccaagaagagagagagctgctgatcgatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaa 227  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  38480409 gagaagaaccaagaagagagagagctgctgatcgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 38480310  T
Q  228 ttgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaag 327  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||   | |||||||||||||||||||||||||||||||||| ||||||    
T  38480309 ttgttatatatgatgattattattgatggtgacttgctgcatatatttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatatctaag 38480210  T
Q  328 ttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  38480209 ttgttaagttgtaagatgttgatccaaattattggagtcatat 38480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 163 - 370
Target Start/End: Original strand, 36685965 - 36686172
Alignment:
Q  163 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgactt 262  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36685965 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattgttatatatgatgattattattgatggtgactt 36686064  T
Q  263 gctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattattgg 362  Q
    |||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36686065 gctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaattattgg 36686164  T
Q  363 agtcatat 370  Q
    ||||||||    
T  36686165 agtcatat 36686172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 163 - 370
Target Start/End: Original strand, 30820971 - 30821178
Alignment:
Q  163 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgactt 262  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30820971 tttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaattgttatatatgatgattattattgatggtaactt 30821070  T
Q  263 gctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattattgg 362  Q
    |||||||||||||||||||   | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30821071 gctgcatatgtttaaatgatgttgtcttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaattattgg 30821170  T
Q  363 agtcatat 370  Q
    ||||||||    
T  30821171 agtcatat 30821178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 9320442 - 9320561
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  9320442 gatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 9320541  T
Q  261 ttgctgcatatgtttaaatg 280  Q
    ||| ||||||||| ||||||    
T  9320542 ttgttgcatatgtctaaatg 9320561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 11085138 - 11085019
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  11085138 gatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 11085039  T
Q  261 ttgctgcatatgtttaaatg 280  Q
    |||||||||| | |||||||    
T  11085038 ttgctgcatacgattaaatg 11085019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 11092876 - 11092757
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  11092876 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 11092777  T
Q  261 ttgctgcatatgtttaaatg 280  Q
    ||| |||||| |||||||||    
T  11092776 ttgttgcatacgtttaaatg 11092757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 15213838 - 15213728
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  15213838 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaattgttatatatgatgattattattgatgttgac 15213739  T
Q  261 ttgctgcatat 271  Q
    |||||||||||    
T  15213738 ttgctgcatat 15213728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 369
Target Start/End: Complemental strand, 8468452 - 8468243
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  8468452 gatttactttgatgattaa-tgtgataatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 8468354  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttaatccaaatt 357  Q
    |||||| | ||  || ||||    |  ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||| |||||||||    
T  8468353 ttgctgtaaattatttaatggtgttgccttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaatt 8468255  T
Q  358 attggagtcata 369  Q
    |||| |||||||    
T  8468254 attgaagtcata 8468243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 369
Target Start/End: Original strand, 14270140 - 14270349
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  14270140 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 14270238  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttaatccaaatt 357  Q
    |||||| | ||  ||  |||    |  ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||| |||||||||    
T  14270239 ttgctgtaaattatttgatggtgttgccttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaatt 14270337  T
Q  358 attggagtcata 369  Q
    ||||||||||||    
T  14270338 attggagtcata 14270349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 369
Target Start/End: Original strand, 45847736 - 45847945
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  45847736 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 45847834  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttaatccaaatt 357  Q
    |||||| | ||  ||  |||    |  ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||| |||||||||    
T  45847835 ttgctgtaaattatttgatggtgttgccttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaatt 45847933  T
Q  358 attggagtcata 369  Q
    ||||||||||||    
T  45847934 attggagtcata 45847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 15439424 - 15439322
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||| ||||||||||||||| |||| || ||||   ||||||||  |||| |||||||||||||||||||||||||| |||||||||||||||| ||    
T  15439424 gatttacgttgatgattaaatgtgaaaagatctatactatgtgaaagttgttgatatgaagttgtaattgttatatatgaagattattattgatggttac 15439325  T
Q  261 ttg 263  Q
    |||    
T  15439324 ttg 15439322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 17232646 - 17232537
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||| ||| ||| |||  |||||||||| ||| || ||||    
T  17232646 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgattattgttgctgttgac 17232548  T
Q  261 ttgctgcatat 271  Q
    |||||| ||||    
T  17232547 ttgctgtatat 17232537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 37727642 - 37727745
Alignment:
Q  163 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgactt 262  Q
    ||||| ||||||||||||||| |||| || |||||| ||||||||  || | |||||||||||||| ||| ||| ||||||||||| |||||| ||||||    
T  37727642 tttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgtagatatgaagttgtaatggttgtatttgatgattattgttgatgttgactt 37727741  T
Q  263 gctg 266  Q
    ||||    
T  37727742 gctg 37727745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 12371527 - 12371455
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||||    
T  12371527 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 12371455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 13148275 - 13148347
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||||    
T  13148275 ttgtgaaagatgttgatatgaagttgtaatggttatattagatgattattgttgatgttgacttgctgcatat 13148347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 210 - 305
Target Start/End: Original strand, 9389705 - 9389800
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||| |||||||||| ||||| |||| |||| |||||||| ||||||| |||||||| ||||||||||||||   | ||||||||| |||||||||    
T  9389705 gttgatatgaagttgaaattgatatacatgaagattattaatgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaat 9389800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 11391898 - 11392001
Alignment:
Q  169 ttgatgattaaatgtta-aaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgc 267  Q
    |||||||||||||||   ||| ||||||||||||||||||| | |  || ||||||||||| |||||||  |||||||||| |||||| |||||||||||    
T  11391898 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgc 11391997  T
Q  268 atat 271  Q
    ||||    
T  11391998 atat 11392001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 8851959 - 8852040
Alignment:
Q  190 atttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||||||||||||  ||| ||| |||||||||| |||||||  |||||||||| |||||| |||||| ||||||||    
T  8851959 atttatatattgtgaaagattttgatataaagttgtaatggttatatgggatgattattgttgatgttgacttactgcatat 8852040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 59314 - 59364
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  59314 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 59364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 8852087 - 8852137
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  8852087 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 8852137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 11066598 - 11066548
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  11066598 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 11066548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 12371408 - 12371358
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  12371408 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 12371358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 11066717 - 11066645
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||| ||| ||| || |||||||||||||||    
T  11066717 ttgtgaaagatgttgatatgaagttgtaatagttatattggatgatcattgttgttgttgacttgctgcatat 11066645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 12128097 - 12128136
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  12128097 ttaagttgtaagatgttgatccaaattattggagtcatat 12128136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 305
Target Start/End: Complemental strand, 17232744 - 17232649
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||| |||| ||||| || ||||| |||||| |||||||| ||||||| ||||| || ||||||||||||||   | || ||||||||||||||||    
T  17232744 gttgatatggagttgcaaatgttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgatgatgtcatgctgttgtgatgaat 17232649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 32434511 - 32434561
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  32434511 gtctaagttgtttaagttgtaagatgttgatccaaattatttgagtcatat 32434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 9389961 - 9390010
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  9389961 gtctaagttgtttaagttgtaaaatgttgatccaaattattggagtcata 9390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 46386997 - 46387034
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  46386997 aagttgtaagatgttgatccaaattattggagtcatat 46387034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 48812018 - 48811981
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  48812018 aagttgtaagatgttgatccaaattattggagtcatat 48811981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 14183562 - 14183601
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  14183562 ttaagttgtaagatgttgatccaaattattggagttatat 14183601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 11392048 - 11392098
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| || ||||||||| || ||||||||||||||||||||||    
T  11392048 gtctaagttgtttaaattgtaagattttgatccaaattattggagtcatat 11392098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 13150467 - 13150517
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||| |||||||| |||||||||    
T  13150467 gtctaagttgtttaagttgtaagatgttgatctaaattatttgagtcatat 13150517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 17232466 - 17232428
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  17232466 ttaagttgtaaggtgttgatccaaattattggagtcata 17232428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 18075455 - 18075500
Alignment:
Q  325 aagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||| ||||||||||||||| || ||||||||| |||||||||    
T  18075455 aagttgtcaagttgtaagatgttgattcaaattatttgagtcatat 18075500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 39267712 - 39267741
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  39267712 ttgtaattgttatatatgatgattattatt 39267741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 8468524 - 8468472
Alignment:
Q  229 tgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatga 281  Q
    ||||| |||||| |||||||| ||||||| ||||| || ||||||||||||||    
T  8468524 tgttacatatgaagattattaatgatggttacttgttgtatatgtttaaatga 8468472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 12127967 - 12128039
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||  |||||||||||||| | |||||  || ||||||| |||||| |||||| ||||||||    
T  12127967 ttgtgaaagatgtttatatgaagttgtaatggatatattggacgattattgttgatgttgacttactgcatat 12128039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 32434396 - 32434456
Alignment:
Q  202 tgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgactt 262  Q
    ||||||| |||| |||||||||||||| |||||||  ||||||||||  ||||| ||||||    
T  32434396 tgaaagatgttgatatgaagttgtaatggttatattggatgattattgctgatgttgactt 32434456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 9e-92; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 161 - 370
Target Start/End: Original strand, 21579919 - 21580129
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  21579919 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgataattattattgatggtgac 21580018  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaatacca-ttaagatgtctaagttgttaagttgtaagatgttaatccaaattat 359  Q
    |||||||||||||||||||||   | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  21580019 ttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccatttaagatgtctaagttgttaagttgtaagatgttgatccaaattat 21580118  T
Q  360 tggagtcatat 370  Q
    |||||||||||    
T  21580119 tggagtcatat 21580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 161 - 370
Target Start/End: Original strand, 29763581 - 29763789
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||     
T  29763581 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga- 29763679  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    |||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29763680 ttgctgcatatgtttaaatgatgatgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaattatt 29763779  T
Q  361 ggagtcatat 370  Q
    | ||||||||    
T  29763780 gaagtcatat 29763789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 169 - 370
Target Start/End: Original strand, 41680843 - 41681043
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  41680843 ttgatgattaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaattgttatatatgatgattattattgatggtgacttgctgca 41680942  T
Q  269 tatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattattggagtcat 368  Q
    ||||||||||||    | ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  41680943 tatgtttaaatggtgatgtcttgttgttgtgatgaattaataccattaagatgtc-aagttgttaagttgtaagatgttgatccaaattattggagtcat 41681041  T
Q  369 at 370  Q
    ||    
T  41681042 at 41681043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 32807396 - 32807285
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32807396 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgca 32807297  T
Q  269 tatgtttaaatg 280  Q
    ||||| ||||||    
T  32807296 tatgtctaaatg 32807285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 42560240 - 42560350
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  42560240 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaattgttatatatgatgattattattgatgttgac 42560339  T
Q  261 ttgctgcatat 271  Q
    |||||||||||    
T  42560340 ttgctgcatat 42560350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 171 - 321
Target Start/End: Complemental strand, 18760664 - 18760514
Alignment:
Q  171 gatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcata 270  Q
    ||||||||||||| |||| ||||||||||||||||||| |||| ||||||||| |||| ||||||| ||||||||||| |||||| ||||||||||||||    
T  18760664 gatgattaaatgtgaaaagatttatatattgtgaaagatgttgatatgaagttataatggttatatttgatgattattgttgatgttgacttgctgcata 18760565  T
Q  271 tgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatg 321  Q
    |  || ||||    |  |||||| |||||||| ||||||| ||||||||||    
T  18760564 ttatttaatggtgatgccttgctattgtgatgtattaatatcattaagatg 18760514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 238 - 363
Target Start/End: Complemental strand, 22965811 - 22965686
Alignment:
Q  238 tgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagtt 337  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    | |||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  22965811 tgatgattattattgatggtgatttgatgcatatgtttaaatggtgttgtcttgctgttatgatgaatcaatactattaagatgtctaagttgttaagtt 22965712  T
Q  338 gtaagatgttaatccaaattattgga 363  Q
     |||||||    ||||||||||||||    
T  22965711 ttaagatgaagttccaaattattgga 22965686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 161 - 369
Target Start/End: Original strand, 38550087 - 38550305
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  38550087 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 38550185  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagat----------gtctaagttg-ttaagttgtaagatgttaa 349  Q
    |||||| | ||  ||  |||    | |||||||| ||||||| ||||||| |||||||||          || ||||||| ||||||||||||||||| |    
T  38550186 ttgctgtaaattatttgatggtgttgtcttgctgatgtgatgtattaatatcattaagatgctaatgttggtttaagttgtttaagttgtaagatgttga 38550285  T
Q  350 tccaaattattggagtcata 369  Q
    ||||||||||||||||||||    
T  38550286 tccaaattattggagtcata 38550305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 369
Target Start/End: Original strand, 27472392 - 27472610
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  27472392 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 27472490  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagat----------gtctaagttg-ttaagttgtaagatgttaa 349  Q
    |||||| | ||  ||  |||    |  ||||||| ||||||| ||||||| |||||||||          || ||||||| ||||||||||||||||| |    
T  27472491 ttgctgtaaattatttgatggtgttgccttgctgatgtgatgtattaatatcattaagatgctaatgttggtttaagttgtttaagttgtaagatgttga 27472590  T
Q  350 tccaaattattggagtcata 369  Q
    ||||||||||||||||||||    
T  27472591 tccaaattattggagtcata 27472610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 369
Target Start/End: Complemental strand, 39834012 - 39833792
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattg-ttatatatgatgattattattgatggtga 259  Q
    ||||||| ||||||||||||||| |||| || ||||||  ||||| |  |||| |||||||||| || || |||||||||| |||||||||||||||| |    
T  39834012 gatttacgttgatgattaaatgtgaaaagatctatataacgtgaatgttgttgatatgaagttgcaaatggttatatatgaagattattattgatggtta 39833913  T
Q  260 cttgctgcatatgtttaaatga-cactctcttgctgttgtgatgaattaataccattaagat---------gtctaagttg-ttaagttgtaagatgtta 348  Q
    || |||| ||||||||||||||  | |  ||||||| ||||||| ||||||| ||| |||||          ||||||||| |||||||||||||||||     
T  39833912 ctcgctgtatatgtttaaatgatgattgccttgctgatgtgatgtattaatatcatgaagatctaatgttgatctaagttgtttaagttgtaagatgttg 39833813  T
Q  349 atccaaattattggagtcata 369  Q
    |||||||||||||||||||||    
T  39833812 atccaaattattggagtcata 39833792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 1327121 - 1327225
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||| || |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  1327121 gatttactttgatgattaa-tgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 1327219  T
Q  261 ttgctg 266  Q
    ||||||    
T  1327220 ttgctg 1327225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 370
Target Start/End: Original strand, 6102532 - 6102683
Alignment:
Q  230 gttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatg-------- 321  Q
    ||||||| |||||||| || |||||| ||||||||| |||||  || ||||    |  ||||||||||||||| ||||||| ||||||||||            
T  6102532 gttatatttgatgattgttgttgatgttgacttgctccatattatttaatggtgttgccttgctgttgtgatgtattaatatcattaagatgctaatgtt 6102631  T
Q  322 --tctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
      ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  6102632 ggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 6102683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 39936813 - 39936885
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||| || ||| |||||||||||||||    
T  39936813 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttaatgttgacttgctgcatat 39936885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 3273270 - 3273212
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaat 228  Q
    ||||||||||||||| |||  ||||||||||||||||| | |||||||||||||||||||    
T  3273270 ttgatgattaaatgtgaaag-atttatatattgtgaaaaatgttggtatgaagttgtaat 3273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 370
Target Start/End: Original strand, 2418971 - 2419009
Alignment:
Q  332 taagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  2418971 taagttgtaagatgttgatccaaattattggagtcatat 2419009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 20982747 - 20982825
Alignment:
Q  188 atatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctg 266  Q
    |||| ||||||||||||||||  ||| |||||||||||||| ||| |||  |||||||||| |||||| ||| ||||||    
T  20982747 atatatatatattgtgaaagatattgatatgaagttgtaatggttgtattagatgattattgttgatgttgatttgctg 20982825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 20982901 - 20982939
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  20982901 ttaagttgtaagatgttgatccaaattattggagtcata 20982939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 39936932 - 39936982
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  39936932 gtctaagttgtttaagtcgtaagatgttgatccaaattattggagtcatat 39936982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 21415211 - 21415281
Alignment:
Q  196 atattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgc 267  Q
    ||||| ||||||| |||| ||||| ||| || ||||| ||||||||||||||||||| || |||||||||||    
T  21415211 atattatgaaagatgttgatatga-gttatacttgttgtatatgatgattattattgttgttgacttgctgc 21415281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 24713340 - 24713301
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  24713340 ttaagttgtaagatgttgatccaaattattgaagtcatat 24713301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 366
Target Start/End: Original strand, 35026960 - 35026994
Alignment:
Q  332 taagttgtaagatgttaatccaaattattggagtc 366  Q
    |||||||||||||||| ||||||||||||||||||    
T  35026960 taagttgtaagatgttgatccaaattattggagtc 35026994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 39695406 - 39695455
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||| |||||||||| ||||| |||||  ||||||||||||||    
T  39695406 gtctaagttgtgaagttgtaagttgttattccaagatattggagtcatat 39695455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 19140014 - 19139966
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattat 247  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||    
T  19140014 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattat 19139966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 6e-90; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 163 - 370
Target Start/End: Original strand, 21557760 - 21557967
Alignment:
Q  163 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgactt 262  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  21557760 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatagtgactt 21557859  T
Q  263 gctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattattgg 362  Q
    |||||||||||||||||||   | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21557860 gctgcatatgtttaaatgatgttgtcttgctgttatgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaattattgg 21557959  T
Q  363 agtcatat 370  Q
    ||||||||    
T  21557960 agtcatat 21557967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 161 - 370
Target Start/End: Original strand, 12122234 - 12122443
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12122234 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgac 12122333  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    |||| ||||||||||||||||   | ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  12122334 ttgcggcatatgtttaaatgatgatgtcttgctgttgtgatgaattaataccattgagatgtttaagttgttaagttgtaagatgttgatccaaattatt 12122433  T
Q  361 ggagtcatat 370  Q
     |||||||||    
T  12122434 tgagtcatat 12122443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 163 - 370
Target Start/End: Original strand, 21555094 - 21555302
Alignment:
Q  163 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgactt 262  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  21555094 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaattgttatatatgatgattattattgatggtgactt 21555193  T
Q  263 gctgcatatgtttaaatgacactctcttgctgttgtgatgaattaatacca-ttaagatgtctaagttgttaagttgtaagatgttaatccaaattattg 361  Q
    |||||||||||||||||||   | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  21555194 gctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccatttaagatgtctaagttgttaagttgtaagatgttgatccaaattattg 21555293  T
Q  362 gagtcatat 370  Q
    |||||||||    
T  21555294 gagtcatat 21555302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 163 - 370
Target Start/End: Complemental strand, 31455830 - 31455620
Alignment:
Q  163 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgat---gattattattgatggtga 259  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||   ||||||||||||||||||    
T  31455830 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaatcgttataaatgatattgattattattgatggtga 31455731  T
Q  260 cttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattat 359  Q
    ||||||||||||||||||||||   | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  31455730 cttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaagtaataccattaagatgtctaagttgttaagttgtaagatgttgatacaaattat 31455631  T
Q  360 tggagtcatat 370  Q
    |||||||||||    
T  31455630 tggagtcatat 31455620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 163 - 370
Target Start/End: Complemental strand, 31455217 - 31455007
Alignment:
Q  163 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgat---gattattattgatggtga 259  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||| |||||| |||||   ||||||||||||||||||    
T  31455217 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgtaatcgttataaatgatattgattattattgatggtga 31455118  T
Q  260 cttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattat 359  Q
    |||| |||||||||||||||||   | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31455117 cttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaagtaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaattat 31455018  T
Q  360 tggagtcatat 370  Q
    |||||||||||    
T  31455017 tggagtcatat 31455007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 162 - 366
Target Start/End: Complemental strand, 30615893 - 30615690
Alignment:
Q  162 atttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgact 261  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||  |||||||||||| |||||||||||    
T  30615893 atttacttttatgattaaatgtgaaaatatt-atatattgtgaaagacgttgatatgaagttgtaattgttataattgatgattattaatgatggtgact 30615795  T
Q  262 tgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattattg 361  Q
    ||||||||||||||||| ||   | ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  30615794 tgctgcatatgtttaaacgatgatgtcttgctgttgcgatgaattaataccattaagatgtataagttgttaagttgtaagatgttgatccaaattattg 30615695  T
Q  362 gagtc 366  Q
    |||||    
T  30615694 gagtc 30615690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 183 - 370
Target Start/End: Complemental strand, 17875331 - 17875144
Alignment:
Q  183 ttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgac 282  Q
    |||| ||||||||||| ||  |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17875331 ttaagatatttatataatgataaagacgttgatatgaagttctaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgat 17875232  T
Q  283 actctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  17875231 attatcttgctgttgtgaagaattaataccattaagatgtctaagttgttaagttgtaagatattgatccaaattattggagtcatat 17875144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 24212507 - 24212387
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  24212507 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattaatattgatggtgac 24212408  T
Q  261 ttgctgcatatgtttaaatga 281  Q
    ||||||||||||| |||||||    
T  24212407 ttgctgcatatgtctaaatga 24212387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 35852762 - 35852643
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| |    
T  35852762 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatacgatgattattattgatggtggc 35852663  T
Q  261 ttgctgcatatgtttaaatg 280  Q
    ||||||||||||| ||||||    
T  35852662 ttgctgcatatgtctaaatg 35852643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 36460309 - 36460199
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| ||||    
T  36460309 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattaatgttgac 36460210  T
Q  261 ttgctgcatat 271  Q
    |||||||||||    
T  36460209 ttgctgcatat 36460199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 5889125 - 5889245
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  |||| |||| ||||| |||||||||| |||| |||||||||||||||| ||    
T  5889125 gatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaattgttatacatgaagattattattgatggttac 5889224  T
Q  261 ttgctgcatatgtttaaatga 281  Q
    |||||| ||||||||||||||    
T  5889225 ttgctgtatatgtttaaatga 5889245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 165 - 369
Target Start/End: Original strand, 29915173 - 29915387
Alignment:
Q  165 tactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgc 264  Q
    ||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||||||    
T  29915173 tactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgc 29915271  T
Q  265 tgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatg----------tctaagttg-ttaagttgtaagatgttaatcca 353  Q
    || | ||  || |||| |  |  ||||||| ||||||| ||||||| ||||||||||          | ||||||| ||||||||||||||||| |||||    
T  29915272 tgtaaattattgaatggcgttgccttgctgatgtgatgtattaatatcattaagatgctaatgtttatttaagttgtttaagttgtaagatgttgatcca 29915371  T
Q  354 aattattggagtcata 369  Q
    ||||||||||||||||    
T  29915372 aattattggagtcata 29915387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 5889271 - 5889375
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| | || |||||||||||||| ||| ||| ||||||||||| |||||| ||||    
T  5889271 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgac 5889369  T
Q  261 ttgctg 266  Q
    ||||||    
T  5889370 ttgctg 5889375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 23200434 - 23200483
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  23200434 gtctaagttgtaaagttgtaagatgttaatccaagatattggagtcatat 23200483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 21871687 - 21871763
Alignment:
Q  192 ttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    |||||||||||||| || | || ||||||||||||||  || ||| ||||||||||| |||||| ||||||||||||    
T  21871687 ttatatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgctgca 21871763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 21875967 - 21876043
Alignment:
Q  192 ttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    |||||||||||||| || | || ||||||||||||||  || ||| ||||||||||| |||||| ||||||||||||    
T  21875967 ttatatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgctgca 21876043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 302
Target Start/End: Original strand, 21741557 - 21741633
Alignment:
Q  226 aattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatg 302  Q
    |||||||||| |||| |||||||| ||||||| ||||| || ||||||||||||||   | ||||||||| ||||||    
T  21741557 aattgttatacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatg 21741633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 347
Target Start/End: Original strand, 12122445 - 12122475
Alignment:
Q  317 agatgtctaagttgttaagttgtaagatgtt 347  Q
    |||||||||||||||||||||||||||||||    
T  12122445 agatgtctaagttgttaagttgtaagatgtt 12122475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 370
Target Start/End: Complemental strand, 25743744 - 25743706
Alignment:
Q  332 taagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  25743744 taagatgtaagatgtcaatccaaattattggagtcatat 25743706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 21741653 - 21741738
Alignment:
Q  187 aatatttatata-ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||||| |||||||||| | |  |||||| | ||||| ||| ||| ||| ||||||| |||||| |||||||||||||||    
T  21741653 aatatttatataattgtgaaagatgcttatatgaaatcgtaatggttgtatttgacgattattgttgatgttgacttgctgcatat 21741738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 21871593 - 21871622
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  21871593 ttgtaattgttatatatgatgattattatt 21871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 21875873 - 21875902
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  21875873 ttgtaattgttatatatgatgattattatt 21875902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 22120217 - 22120246
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  22120217 ttgtaattgttatatatgatgattattatt 22120246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 166; Significance: 9e-89; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 161 - 370
Target Start/End: Complemental strand, 1705 - 1496
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  1705 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtgac 1606  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    ||| |||||||||||||||||   | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1605 ttgatgcatatgtttaaatgatgttgtcttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaattatt 1506  T
Q  361 ggagtcatat 370  Q
    ||||| ||||    
T  1505 ggagttatat 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 166; Significance: 9e-89; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 161 - 370
Target Start/End: Original strand, 20734160 - 20734368
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  20734160 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 20734259  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    ||||||||||||||||||||    | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  20734260 ttgctgcatatgtttaaatggtgttgtcttgctgttgtgatgaattaataccattaagatgtc-aagttgttaagttgtaagatgttgatccaaattatt 20734358  T
Q  361 ggagtcatat 370  Q
    ||||||||||    
T  20734359 ggagtcatat 20734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 2201258 - 2201139
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  2201258 gatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 2201159  T
Q  261 ttgctgcatatgtttaaatg 280  Q
    ||||||||||||| ||||||    
T  2201158 ttgctgcatatgtctaaatg 2201139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 22421106 - 22420987
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  22421106 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatagtgac 22421007  T
Q  261 ttgctgcatatgtttaaatg 280  Q
    ||| ||||||||| ||||||    
T  22421006 ttgttgcatatgtctaaatg 22420987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 34296982 - 34297092
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| ||||    
T  34296982 gatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattaatgttgac 34297081  T
Q  261 ttgctgcatat 271  Q
    |||||||||||    
T  34297082 ttgctgcatat 34297092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 363
Target Start/End: Complemental strand, 19399895 - 19399684
Alignment:
Q  163 tttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgactt 262  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||| |||||| ||||||    
T  19399895 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgactt 19399796  T
Q  263 gctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagat----------gtctaagttg-ttaagttgtaagatgttaatc 351  Q
    |||||||||  || ||||   ||  |||||| |||||||| |||| || |||||||||          |||||||||| ||||||||||||||||| |||    
T  19399795 gctgcatattatttaatggttctgccttgcttttgtgatgtattattatcattaagatgctaatgttggtctaagttgtttaagttgtaagatgttgatc 19399696  T
Q  352 caaattattgga 363  Q
    |||| |||||||    
T  19399695 caaagtattgga 19399684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 27851341 - 27851220
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaa-ttgttatatatgatgattattattgatggtga 259  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| |||||||||||||||| |    
T  27851341 gatttaccttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaagattattattgatggtta 27851242  T
Q  260 cttgctgcatatgtttaaatga 281  Q
    |||| ||  |||||||||||||    
T  27851241 cttgttgtgtatgtttaaatga 27851220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 305
Target Start/End: Original strand, 25956570 - 25956714
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  |||| |||| ||||| || |||||||||||| |||||||||||||||| ||    
T  25956570 gatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggttac 25956669  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||||| ||||||||||||||   | |||||||||||||||||||    
T  25956670 ttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 25956714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 18927954 - 18927853
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||  ||||||||||||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| ||||||||||||    
T  18927954 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 18927856  T
Q  269 tat 271  Q
    |||    
T  18927855 tat 18927853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 25956717 - 25956821
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| | || |||||||||||||| ||| ||| ||||||||||| |||||| ||||    
T  25956717 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgac 25956815  T
Q  261 ttgctg 266  Q
    ||||||    
T  25956816 ttgctg 25956821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 369
Target Start/End: Complemental strand, 27851193 - 27850984
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    |||||||||||||| |||| ||| | |||||||||||||||||||||| | || |||||||||||| | ||| ||| ||||||||||| | |||| ||||    
T  27851193 gatttactttgatgcttaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgattattgtcgatgttgac 27851095  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttaatccaaatt 357  Q
    |||||||| ||  ||  |||    |  ||| ||| ||||||| ||||||| |||||||||| |||| ||||  |||||||||||||||||  ||||||||    
T  27851094 ttgctgcaaattatttgatggtgttgccttactgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttggtccaaatt 27850996  T
Q  358 attggagtcata 369  Q
    ||||||||||||    
T  27850995 attggagtcata 27850984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 31630623 - 31630727
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| ||||||||| |||| ||| |||  |||||||||| |||||| ||||    
T  31630623 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttataatggttgtattagatgattattgttgatgttgac 31630721  T
Q  261 ttgctg 266  Q
    ||||||    
T  31630722 ttgctg 31630727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 27322221 - 27322293
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||||    
T  27322221 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 27322293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 28708754 - 28708651
Alignment:
Q  169 ttgatgattaaatgtta-aaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgc 267  Q
    |||||||||||||||   ||| ||||||||||||||||||| | |  || ||||||||||| |||||||  |||||||||| |||||| |||||||||||    
T  28708754 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgc 28708655  T
Q  268 atat 271  Q
    ||||    
T  28708654 atat 28708651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 18708749 - 18708677
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||| || ||| |||||||||||||||    
T  18708749 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgtttatgttgacttgctgcatat 18708677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 23151069 - 23151141
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||| || ||| |||||||||||||||    
T  23151069 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttaatgttgacttgctgcatat 23151141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 17318992 - 17319042
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  17318992 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 17319042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 18708630 - 18708580
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  18708630 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 18708580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 31733833 - 31733794
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  31733833 ttaagttgtaagatgttgatccaaattattggagtcatat 31733794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 23151188 - 23151238
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  23151188 gtctaagttgtttaagtcgtaagatgttgatccaaattattggagtcatat 23151238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 31733887 - 31733841
Alignment:
Q  325 aagttgttaa-gttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  31733887 aagttgttaaagttgtaagatgttgatccaaattattggagtcatat 31733841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 19829827 - 19829876
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||| |||||||||||||||  |||||| ||||||||||||||    
T  19829827 gtctaagttgtaaagttgtaagatgttgttccaaagtattggagtcatat 19829876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 366
Target Start/End: Original strand, 27573027 - 27573072
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtc 366  Q
    ||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  27573027 gtctaagttgtgaagttgtaagatgttgatccaaagtattggagtc 27573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 27323551 - 27323590
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  27323551 ttaagttgtaagatgttgatccaaattattggcgtcatat 27323590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 28708604 - 28708554
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| || ||||||||| || ||||||||||||||||||||||    
T  28708604 gtctaagttgtttaaattgtaagattttgatccaaattattggagtcatat 28708554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 162; Significance: 2e-86; HSPs: 4)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 161 - 370
Target Start/End: Original strand, 6391 - 6599
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  6391 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 6490  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    ||||||||||||||||||||    | ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  6491 ttgctgcatatgtttaaatggtgttgtcttgctattgtgatgaattaataccattaagatgtc-aagttgttaagttgtaagatgttgatccaaattatt 6589  T
Q  361 ggagtcatat 370  Q
    ||||||||||    
T  6590 ggagtcatat 6599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 5593 - 5632
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  5593 ttaagttgtaagatgttgatccaaattattggagtcatat 5632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 5634 - 5688
Alignment:
Q  317 agatgtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  5634 agatctctaagttgtttaagttgtaagatgttgatccaaattattgcagtcatat 5688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 5758 - 5797
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  5758 ttaagttgtaagatgttgatccaaattattgcagtcatat 5797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 161 - 370
Target Start/End: Complemental strand, 14479 - 14270
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  14479 gatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtgac 14380  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    ||| |||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  14379 ttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagattttgatccaaattatt 14280  T
Q  361 ggagtcatat 370  Q
    ||||||||||    
T  14279 ggagtcatat 14270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 2e-86; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 161 - 370
Target Start/End: Complemental strand, 22501128 - 22500919
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||| ||    
T  22501128 gatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggtaac 22501029  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    |||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  22501028 ttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatattgatccaaattatt 22500929  T
Q  361 ggagtcatat 370  Q
    ||||||||||    
T  22500928 ggagtcatat 22500919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 161 - 370
Target Start/End: Complemental strand, 22509062 - 22508853
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||| ||    
T  22509062 gatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggtaac 22508963  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    |||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  22508962 ttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatattgatccaaattatt 22508863  T
Q  361 ggagtcatat 370  Q
    ||||||||||    
T  22508862 ggagtcatat 22508853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 161 - 370
Target Start/End: Original strand, 24865483 - 24865692
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  24865483 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtgac 24865582  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    ||| |||||||||||||||||   | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24865583 ttgatgcatatgtttaaatgatgttgtcttgctattgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaattatt 24865682  T
Q  361 ggagtcatat 370  Q
    ||||| ||||    
T  24865683 ggagttatat 24865692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 161 - 346
Target Start/End: Original strand, 7672271 - 7672450
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||      |||||| ||||||||||||||||||||||    
T  7672271 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgt------tatataagatgattattattgatggtgac 7672364  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgt 346  Q
    ||| |||||| ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7672365 ttgatgcatacgtttaaatgatgctgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagtcgtaagatgt 7672450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 370
Target Start/End: Complemental strand, 6576505 - 6576293
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    |||||||||||| || |||| ||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||    
T  6576505 ttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacttgctgca 6576406  T
Q  269 tatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagat----------gtctaagttg-ttaagttgtaagatgttaatccaaatt 357  Q
    |||  || ||||   ||  |||||| |||||||| | ||||| |||||||||          |||||||||| ||||||||||||||||| |||||||||    
T  6576405 tattatttaatggtgctgccttgctattgtgatgtaataatatcattaagatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaatt 6576306  T
Q  358 attggagtcatat 370  Q
    |||||||||||||    
T  6576305 attggagtcatat 6576293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 2524442 - 2524526
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgatt 245  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||| |||||||||||    
T  2524442 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatcaaattgtaattgttacatatgatgatt 2524526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 24883713 - 24883630
Alignment:
Q  188 atatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||||    
T  24883713 atatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 24883630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 22501200 - 22501128
Alignment:
Q  183 ttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatg 255  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  22501200 ttaagatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatg 22501128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 22509134 - 22509062
Alignment:
Q  183 ttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatg 255  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  22509134 ttaagatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatg 22509062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 24436321 - 24436221
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||  ||||||||||||||||||| |||| |||||| ||||||| |||| ||  ||||||| || |||||| ||||||||||||    
T  24436321 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaaattgtaatggttacattggatgatt-ttgttgatgttgacttgctgca 24436224  T
Q  269 tat 271  Q
    |||    
T  24436223 tat 24436221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 24781643 - 24781715
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||  |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||||    
T  24781643 ttgtgaaagttgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 24781715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 5032246 - 5032296
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  5032246 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 5032296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 9975059 - 9975005
Alignment:
Q  317 agatgtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  9975059 agatgtctaagttgtttaagttgtaagatgttgatccaaattattgaagtcatat 9975005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 24436174 - 24436124
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  24436174 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 24436124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 24781762 - 24781812
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  24781762 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 24781812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 5032127 - 5032199
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||| | |||| ||||||||| |||| |||||||  |||||||||| |||||| |||||||||||||||    
T  5032127 ttgtgaaaaatgttgatatgaagttataatggttatattggatgattattgttgatgttgacttgctgcatat 5032199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 22689810 - 22689760
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  22689810 gtctaagttgtttaagttgtaagatgttgatccaaattatttgagtcatat 22689760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 22694406 - 22694356
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  22694406 gtctaagttgtttaagttgtaagatgttgatccaaattatttgagtcatat 22694356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 370
Target Start/End: Complemental strand, 24883580 - 24883542
Alignment:
Q  332 taagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  24883580 taagttgtaagatgttgatccaaattattggagtcatat 24883542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 9975098 - 9975061
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  9975098 aagttgtaagatgttgatccaaattattggagtcatat 9975061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 21367963 - 21367926
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||  |||||||||||||||||||||    
T  21367963 aagttgtaagatgttgttccaaattattggagtcatat 21367926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 25045179 - 25045130
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||| |||||||||| ||||| |||||  ||||||||||||||    
T  25045179 gtctaagttgtaaagttgtaagttgttattccaagatattggagtcatat 25045130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 161 - 370
Target Start/End: Complemental strand, 11034 - 10825
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||| |||||    
T  11034 gatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaattgttatatatgatgattattattgattgtgac 10935  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    |||||||||||||||||||||   | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10934 ttgctgcatatgtttaaatgatgttgtcttgctgttttgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaattatt 10835  T
Q  361 ggagtcatat 370  Q
    ||||| ||||    
T  10834 ggagttatat 10825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 5e-84; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 161 - 362
Target Start/End: Complemental strand, 33186241 - 33186040
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33186241 gatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgac 33186142  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    ||||||||| |||||||||||   | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  33186141 ttgctgcatttgtttaaatgatgatgtcttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaatcatt 33186042  T
Q  361 gg 362  Q
    ||    
T  33186041 gg 33186040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 15880836 - 15880717
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  15880836 gatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgac 15880737  T
Q  261 ttgctgcatatgtttaaatg 280  Q
    ||||| ||||||| ||||||    
T  15880736 ttgctacatatgtctaaatg 15880717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 369
Target Start/End: Complemental strand, 362271 - 362062
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||||||||| ||||||||| |||| ||| |||  |||||||||| |||||| ||||    
T  362271 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagacgttgatatgaagttataatggttgtattagatgattattgttgatgttgac 362173  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttaatccaaatt 357  Q
    |||||| | ||  ||  |||    |  ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||| |||||||||    
T  362172 ttgctgtaaattatttgatggtgttgccttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaatt 362074  T
Q  358 attggagtcata 369  Q
    ||||||||||||    
T  362073 attggagtcata 362062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 161 - 305
Target Start/End: Complemental strand, 13844711 - 13844567
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||| ||||||||||||||| ||||||| |||||| ||||||||  |||| |||| ||||| || |||||||||||| |||||||||||||||| ||    
T  13844711 gatttacgttgatgattaaatgtgaaaatatctatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggttac 13844612  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    ||| || ||||||||||||||   | |||| ||||||||||||||    
T  13844611 ttgttgtatatgtttaaatgatgttgtcttactgttgtgatgaat 13844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 9923427 - 9923326
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||  ||||||||||||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| ||||||||||||    
T  9923427 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 9923329  T
Q  269 tat 271  Q
    |||    
T  9923328 tat 9923326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 11479432 - 11479533
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||  ||||||||||||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| ||||||||||||    
T  11479432 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 11479530  T
Q  269 tat 271  Q
    |||    
T  11479531 tat 11479533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 52873253 - 52873357
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  52873253 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 52873351  T
Q  261 ttgctg 266  Q
    ||||||    
T  52873352 ttgctg 52873357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 305
Target Start/End: Complemental strand, 46642982 - 46642862
Alignment:
Q  185 aaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacac 284  Q
    |||| ||||||||||||||||||  |||  ||||||||||||||||||| |||||| || |||||||| |||| ||||| || ||||||||||||||  |    
T  46642982 aaaagatttatatattgtgaaagttgttaatatgaagttgtaattgttacatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgc 46642883  T
Q  285 tctcttgctgttgtgatgaat 305  Q
    |  ||||||||||||||||||    
T  46642882 tgccttgctgttgtgatgaat 46642862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 35812211 - 35812312
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    |||||||||||||||  ||  ||||||||||||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| ||||||||||||    
T  35812211 ttgatgattaaatgtggaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 35812309  T
Q  269 tat 271  Q
    |||    
T  35812310 tat 35812312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 46642859 - 46642750
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    |||||| |||||||||||| ||| | || ||||||| | |||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||| ||||    
T  46642859 gatttaatttgatgattaa-tgtgagaagatttataaactgtgaaagacgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgac 46642761  T
Q  261 ttgctgcatat 271  Q
     ||||||||||    
T  46642760 gtgctgcatat 46642750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 13844564 - 13844461
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||| ||||| ||| | |||||||||||||||||||||| | || |||||||||||||| ||| ||| |||| |||||| |||||| ||||    
T  13844564 gatttactttgattattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgattattattgttgatgatgac 13844466  T
Q  261 ttgct 265  Q
    |||||    
T  13844465 ttgct 13844461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 268
Target Start/End: Original strand, 15868796 - 15868901
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||  | |||||| |||||||||||| || | || ||||||||||||||  |||||| ||||||||||| |||||| ||||    
T  15868796 gatttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattatatctgatgattattgttgatgttgac 15868893  T
Q  261 ttgctgca 268  Q
    ||||||||    
T  15868894 ttgctgca 15868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 630862 - 630966
Alignment:
Q  162 atttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgact 261  Q
    |||||||||||||||||| ||  | |||||| |||||||||||| || | || ||||||||||||||  || ||| |||||||||||||||||| |||||    
T  630862 atttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattattgatgttgact 630959  T
Q  262 tgctgca 268  Q
    |||||||    
T  630960 tgctgca 630966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 10357358 - 10357412
Alignment:
Q  317 agatgtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  10357358 agatgtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 10357412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 15190428 - 15190360
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaa 278  Q
    |||| |||||||||| |||||||||| |||| |||||||| ||||||| |||||||| |||||||||||    
T  15190428 gttgatatgaagttgaaattgttatacatgaagattattaatgatggttacttgctgtatatgtttaaa 15190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 10357306 - 10357356
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  10357306 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 10357356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 19609454 - 19609404
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  19609454 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 19609404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 21189762 - 21189842
Alignment:
Q  186 aaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgc 267  Q
    |||||||||||| || ||||||| |||| ||| | ||| || ||||| ||||||||||||||||||| ||||||||||||||    
T  21189762 aaatatttatatgttatgaaagatgttgatatca-gttatacttgttgtatatgatgattattattgttggtgacttgctgc 21189842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 15099461 - 15099393
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaa 278  Q
    |||| |||||||||| |||||||||| || | |||||||| ||||||| |||||||| |||||||||||    
T  15099461 gttgatatgaagttgaaattgttatacataaagattattaatgatggttacttgctgtatatgtttaaa 15099393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 19609573 - 19609509
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttg 263  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||    
T  19609573 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttg 19609509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 15042060 - 15042099
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  15042060 ttaagttgtaagatgttgatccaaattattggagtcatat 15042099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 15112364 - 15112325
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  15112364 ttaagttgtaagatgttgatccaaattattggagtcatat 15112325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 15869022 - 15869060
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  15869022 ttaagttgtaagatgttgatccaaattattggagtcata 15869060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 19857427 - 19857389
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  19857427 ttaagttgtaagatgttgatccaaattattggagtcata 19857389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 369
Target Start/End: Complemental strand, 15099349 - 15099156
Alignment:
Q  187 aatatttatata-ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacact 285  Q
    |||||||||||| |||||||||| | |  |||||||| ||||| ||| ||| ||| ||||||| |||||| ||||||||||||||   || ||||    |    
T  15099349 aatatttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctgcatactatttaatggtgtt 15099250  T
Q  286 ctcttgctgttgtgatgaattaataccattaagat---------gtctaagttg-ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
      ||||| ||||||| | ||||||| ||| |||||         |||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  15099249 gccttgcggttgtgacgtattaatatcatgaagatctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattagagtcata 15099156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 14185291 - 14185252
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaaga 208  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  14185291 ttgatggttaaatgtgaaaatatttatatattgtgaaaga 14185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 32851191 - 32851153
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  32851191 ttaatttgtaagatgttgatccaaattattggagtcata 32851153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 35812359 - 35812409
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| |||||| ||||| || ||||||||||||||||||||||    
T  35812359 gtctaagttgtttaagttgaaagatattgatccaaattattggagtcatat 35812409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 630796 - 630825
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  630796 ttgtaattgttatatatgatgattattatt 630825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 13812831 - 13812860
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  13812831 ttgtaattgttatatatgatgattattatt 13812860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 15868731 - 15868760
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  15868731 ttgtaattgttatatatgatgattattatt 15868760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 27995925 - 27995888
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  27995925 aagttgtaagatgttattccaaagtattggagtcatat 27995888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 32467169 - 32467218
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||| |||||||||| ||||| |||||  ||||||||||||||    
T  32467169 gtctaagttgtaaagttgtaagttgttattccaagatattggagtcatat 32467218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 5e-84; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 161 - 370
Target Start/End: Original strand, 51274301 - 51274510
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  51274301 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtgac 51274400  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttaatccaaattatt 360  Q
    ||| ||||||||||||||||    | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51274401 ttgatgcatatgtttaaatgtttttgttttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaattatt 51274500  T
Q  361 ggagtcatat 370  Q
    ||||||||||    
T  51274501 ggagtcatat 51274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 12328568 - 12328673
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  12328568 gatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaattgttatatatgatgattattattgatggtgac 12328667  T
Q  261 ttgctg 266  Q
    ||||||    
T  12328668 ttgctg 12328673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 305
Target Start/End: Original strand, 28194398 - 28194542
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  |||| |||| ||||| || |||||||||||| |||||||||||||||| ||    
T  28194398 gatttacgttgatgattaaatgtgaaaaaatctatataatgtgaaagttgttgatatgtagttgcaaatgttatatatgaagattattattgatggttac 28194497  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||||| ||||||||||||||   | |||||||||||||||||||    
T  28194498 ttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 28194542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 8885536 - 8885447
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattat 250  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||    
T  8885536 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgtaatatatgatgattgttat 8885447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 51326974 - 51326892
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||| || ||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  51326974 ttgatgattaaatgtgaacatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgttgattattatt 51326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 301
Target Start/End: Complemental strand, 43697537 - 43697405
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||| || |||||| ||||||||  |||| |||| ||||| || |||||||||||| ||||||||||| |||| |||||||| |    
T  43697537 ttgatgattaaatgtgaaaagatctatatagtgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgttggttacttgctgta 43697438  T
Q  269 tatgtttaaatgacactctcttgctgttgtgat 301  Q
    |||||||| ||||  || |||||||||||||||    
T  43697437 tatgtttatatgatgctgtcttgctgttgtgat 43697405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 305
Target Start/End: Complemental strand, 49261452 - 49261357
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||| ||||| |  |||||||||||||| ||| ||||||||| |||||||||    
T  49261452 gttgatatgaagttgtaattgttatacatgaagattattattgatggttacttgttatatatgtttaaatgatactgtcttgctgtcgtgatgaat 49261357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 255
Target Start/End: Original strand, 28194545 - 28194638
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatg 255  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| ||| ||||||||||| ||||||    
T  28194545 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgattattgttgatg 28194638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 161 - 266
Target Start/End: Complemental strand, 43543135 - 43543031
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| ||||||||||||||  || |||  |||||||||| |||||| ||||    
T  43543135 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatgattgtattagatgattattgttgatgttgac 43543037  T
Q  261 ttgctg 266  Q
    ||||||    
T  43543036 ttgctg 43543031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 305
Target Start/End: Complemental strand, 20636955 - 20636866
Alignment:
Q  216 atgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||||||||||||||||||| ||||  ||||||||||||||| |||||||| ||||||||||||||   | ||||||||| |||||||||    
T  20636955 atgaagttgtaattgttatacatgaatattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaat 20636866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 266
Target Start/End: Complemental strand, 43697398 - 43697294
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | | |||| ||||||||||||||| | || |||||||||||||| ||| ||| ||||||||||| |||||| ||||    
T  43697398 gatttactttgatgattaa-tgtgagattattgatatattgtgaaagatgctgatatgaagttgtaatggttttatttgatgattattgttgatgatgac 43697300  T
Q  261 ttgctg 266  Q
    ||||||    
T  43697299 ttgctg 43697294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 46382653 - 46382755
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | ||||||||||  |||||||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  46382653 gatttactttgatgattaa-tgtgagaatatttata--ttgtgaaagatgttgatatgaagttgtaatggttttattagatgattattgttgatgttgac 46382749  T
Q  261 ttgctg 266  Q
    ||||||    
T  46382750 ttgctg 46382755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 48301121 - 48301040
Alignment:
Q  190 atttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    ||||||||||||||||||| |||| |||||||||||||| |||| ||  ||| |||||| |||||| |||||||||||||||    
T  48301121 atttatatattgtgaaagatgttgatatgaagttgtaatggttacatgagattattattgttgatgttgacttgctgcatat 48301040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 369
Target Start/End: Original strand, 41305818 - 41305901
Alignment:
Q  288 cttgctgttgtgatgaattaataccattaagatgtctaa-gttg--ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||| ||||||| ||||||| |||||||||| |||| ||||  ||||||||||||||||| |||||||||||||||||||||    
T  41305818 cttgctgatgtgatgtattaatatcattaagatg-ctaatgttggtttaagttgtaagatgttgatccaaattattggagtcata 41305901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 48300993 - 48300943
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  48300993 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 48300943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 35981952 - 35982001
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  35981952 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcata 35982001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 370
Target Start/End: Original strand, 20634508 - 20634546
Alignment:
Q  332 taagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  20634508 taagttgtaagatgttgatccaaattattggagtcatat 20634546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 370
Target Start/End: Original strand, 41227628 - 41227666
Alignment:
Q  332 taagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  41227628 taagttgtaagatgttgatccaaattattggagtcatat 41227666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 46382831 - 46382869
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  46382831 ttaagttgtaagatgttgatccaaattattggagtcata 46382869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 11809420 - 11809457
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11809420 aagttgtaagatgttgatccaaattattggagtcatat 11809457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 20636837 - 20636764
Alignment:
Q  198 attgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    ||||||||||| |||  |||||||| ||||| ||| ||| ||| ||||||| |||||| |||||||||||||||    
T  20636837 attgtgaaagatgtttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctgcatat 20636764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 8882216 - 8882176
Alignment:
Q  240 atgattattattgatggtgacttgctgcatatgtttaaatg 280  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  8882216 atgattattattgatggtaacttgctgcatatgtctaaatg 8882176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 305
Target Start/End: Original strand, 35981696 - 35981791
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||| |||||||||| |||||||  | |||| ||||| || ||||||| ||||| || ||||||||||||||   | ||||||||| |||||||||    
T  35981696 gttgatatgaagttgaaattgttgcacatgaagattactaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatgaat 35981791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 41227507 - 41227578
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcata 270  Q
    |||||||||| |||  ||||||||| |||| |||||||  |||||||||| || ||| ||||||||||||||    
T  41227507 ttgtgaaagatgtttatatgaagttttaatggttatattggatgattattgttaatgttgacttgctgcata 41227578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 20587860 - 20587810
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  20587860 gtctaagttgtttaagctgtaagatgttgatccaaattataggagtcatat 20587810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 20592398 - 20592348
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  20592398 gtctaagttgtttaagctgtaagatgttgatccaaattataggagtcatat 20592348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 43542963 - 43542917
Alignment:
Q  324 taagttgtt-aagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||    
T  43542963 taagttgtttaagttgtaagatgttgaaccaaattattggagtcata 43542917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 1642615 - 1642566
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||| ||||| |||||| |||||||||  ||||||||||||||    
T  1642615 gtctaagttgtaaagttctaagatattaatccaagatattggagtcatat 1642566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 8276868 - 8276917
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||| |||||||||| ||||| |||||  ||||||||||||||    
T  8276868 gtctaagttgtaaagttgtaagttgttattccaagatattggagtcatat 8276917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 23073114 - 23073077
Alignment:
Q  333 aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  23073114 aagttctaagatgttgatccaaattattggagtcatat 23073077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 24726500 - 24726451
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||| |||||||||| ||||| |||||  ||||||||||||||    
T  24726500 gtctaagttgtaaagttgtaagttgttattccaagatattggagtcatat 24726451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 35981808 - 35981893
Alignment:
Q  187 aatatttatata-ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||||| |||||||||| | |  |||||||| ||||| ||| ||| ||| ||||||| |||||| ||||||| |||||||    
T  35981808 aatatttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgttgcatat 35981893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 611 - 450
Alignment:
Q  173 tgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatg 272  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  611 tgattaaatgagaaaatatttatatattgtgaaagacgttgatatgaaattataattgttatatatgatgattattattgatggtgacttgctgcatatg 512  T
Q  273 tttaaatgacactctcttgctgttgtgatgaattaataccattaagatgtctaagttgttaa 334  Q
    || ||||||   | |||||||||||||||||||||||| |||||||||||||||||||||||    
T  511 ttaaaatgatgttgtcttgctgttgtgatgaattaatatcattaagatgtctaagttgttaa 450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 4754 - 4644
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||    
T  4754 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgac 4655  T
Q  261 ttgctgcatat 271  Q
    ||| |||||||    
T  4654 ttgatgcatat 4644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 336 - 226
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||    
T  336 gatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgac 237  T
Q  261 ttgctgcatat 271  Q
    ||| |||||||    
T  236 ttgatgcatat 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 6772 - 6882
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||  |||||| ||||||||||| || ||| ||||    
T  6772 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaatgattatatttgatgattattgttcatgttgac 6871  T
Q  261 ttgctgcatat 271  Q
    |||||||||||    
T  6872 ttgctgcatat 6882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 305
Target Start/End: Original strand, 43733 - 43877
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  |||| |||| ||||| || |||||||||||| |||||||||||||||| ||    
T  43733 gatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggttac 43832  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||||| ||||||||||||||   | |||||||||||||||||||    
T  43833 ttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 43877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 161 - 305
Target Start/End: Original strand, 47653 - 47797
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||| ||||||||||||||| |||| || |||||| ||||||||  |||| |||| ||||| || |||||||||||| |||||||||||||||| ||    
T  47653 gatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaaatgttatatatgaagattattattgatggttac 47752  T
Q  261 ttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    ||| || ||||||||||||||   | |||||||||||||||||||    
T  47753 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 47797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 43880 - 43984
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| | || |||||||||||||| ||| ||| ||||||||||| |||||| ||||    
T  43880 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgac 43978  T
Q  261 ttgctg 266  Q
    ||||||    
T  43979 ttgctg 43984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 59327 - 59437
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||  ||||||||||||||||||| |||| ||||||||||||||||||||||  |||||||||| |||||| ||||||||||||    
T  59327 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaattgttatattggatgattattgttgatgttgacttgctgca 59425  T
Q  269 tatgtttaaatg 280  Q
    ||| ||| ||||    
T  59426 tattttttaatg 59437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 59475 - 59525
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| |||||| |||||||| ||||||||||||| ||||||||    
T  59475 gtctaagttgtttaagttgcaagatgttgatccaaattattgaagtcatat 59525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 64; Significance: 7e-28; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 161 - 268
Target Start/End: Complemental strand, 85273 - 85167
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| ||| ||||||||||| |||||| ||||    
T  85273 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatagttgtatttgatgattattgttgatgttgac 85175  T
Q  261 ttgctgca 268  Q
    ||||||||    
T  85174 ttgctgca 85167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 305
Target Start/End: Complemental strand, 85371 - 85276
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||| |||| ||||| || |||||||||||| |||||||||||||||| ||||| || ||||||||||||||   | |||||||||||||||||||    
T  85371 gttgatatggagttgcaaatgttatatatgaagattattattgatggttacttgatgtatatgtttaaatgaagttgtcttgctgttgtgatgaat 85276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 85101 - 85055
Alignment:
Q  324 taagttgtt-aagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  85101 taagttgtttaagttttaagatgttgatccaaattattggagtcata 85055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 36144 - 36248
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| ||||    
T  36144 gatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatattagatgattattgttgatgttgac 36242  T
Q  261 ttgctg 266  Q
    ||||||    
T  36243 ttgctg 36248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 61; Significance: 4e-26; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 15448 - 15556
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||||||||||||||||||||| | |||| ||||||||||  ||||||||||  ||||||||| ||||||| ||| ||||||||    
T  15448 ttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcgatgattatcattgatgttgatttgctgca 15547  T
Q  269 tatgtttaa 277  Q
    ||| |||||    
T  15548 tatatttaa 15556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 24506 - 24614
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||||||||||||||||||||| | |||| ||||||||||  ||||||||||  ||||||||| ||||||| ||| ||||||||    
T  24506 ttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcgatgattatcattgatgttgatttgctgca 24605  T
Q  269 tatgtttaa 277  Q
    ||| |||||    
T  24606 tatatttaa 24614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 19320 - 19366
Alignment:
Q  325 aagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||    
T  19320 aagttgttcaagtcgtaagatgttgatccaaattattggagtcatat 19366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 3063 - 2966
Alignment:
Q  168 tttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctg 266  Q
    |||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||| ||| ||| ||||||||||| |||||| ||||||||||    
T  3063 tttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacttgctg 2966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 935 - 834
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||  ||| ||||||||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| ||||||||||||    
T  935 ttgatgattaaatgtgaaag-attaatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 837  T
Q  269 tat 271  Q
    |||    
T  836 tat 834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 3194 - 3093
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||  |||||||||| |||||| | |||| |||||||||||||| |||||||  |||||||||| |||||| ||||||||||||    
T  3194 ttgatgattaaatgtgaaag-atttatatatcgtgaaaaatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 3096  T
Q  269 tat 271  Q
    |||    
T  3095 tat 3093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 3047 - 2996
Alignment:
Q  320 tgtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3047 tgtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 2996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 10965 - 11069
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||| | ||| | |||||||||||||||| ||||| |||| |||||||||||||| ||| |||  |||||||||| |||||| ||||    
T  10965 gatttactttgatgattta-tgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgac 11063  T
Q  261 ttgctg 266  Q
    ||||||    
T  11064 ttgctg 11069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 266
Target Start/End: Complemental strand, 363030 - 362926
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||| | |||||||||||||| ||||||| |||| ||||||||||||||  || |||  |||||||||| |||||| ||||    
T  363030 gatttactttgatgattaa-tgtgagaatatttatatattttgaaagatgttgatatgaagttgtaatgattgtattagatgattattgttgatgttgac 362932  T
Q  261 ttgctg 266  Q
    ||||||    
T  362931 ttgctg 362926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 362858 - 362812
Alignment:
Q  324 taagttgtt-aagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  362858 taagttgtttaagttgtaagatgttgatccaaattattggattcata 362812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 5478 - 5579
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||  ||||||||||||||||||  |||| ||||||||||||||  ||||||  |||||||||| |||||| | ||||||||||    
T  5478 ttgatgattaaatgtgaaag-atttatatattgtgaaaggtgttgatatgaagttgtaatgtttatattggatgattattgttgatgttaacttgctgca 5576  T
Q  269 tat 271  Q
    |||    
T  5577 tat 5579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 10029 - 10101
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||||    
T  10029 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 10101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 10150 - 10198
Alignment:
Q  323 ctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||| |||| |||||| ||| ||||||||||||||||||||||    
T  10150 ctaagttgtttaagtcgtaagacgttgatccaaattattggagtcatat 10198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 210 - 305
Target Start/End: Original strand, 2300 - 2395
Alignment:
Q  210 gttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat 305  Q
    |||| |||||||||| ||||||| || |||| |||||||| ||||||| ||||| || ||||||||||||||  || ||||||||| |||||||||    
T  2300 gttgatatgaagttgaaattgttgtacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgctgtcttgctgtcgtgatgaat 2395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 2556 - 2605
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  2556 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcata 2605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 2424 - 2495
Alignment:
Q  198 attgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcat 269  Q
    ||||||||||| |||  |||||||| ||||| ||| ||| ||| ||||||| |||||| |||||||||||||    
T  2424 attgtgaaagatgtttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctgcat 2495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 2449 - 2552
Alignment:
Q  169 ttgatgattaaatgtta-aaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgc 267  Q
    |||||||||||||||   ||| ||||||||||||||||||| | |  || ||||||||||| |||||||  |||||||||| |||||| |||||||||||    
T  2449 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgc 2548  T
Q  268 atat 271  Q
    ||||    
T  2549 atat 2552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 2599 - 2649
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| || ||||||||| || ||||||||||||||||||||||    
T  2599 gtctaagttgtttaaattgtaagattttgatccaaattattggagtcatat 2649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 9106 - 9177
Alignment:
Q  200 tgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    ||||||||| |||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||||    
T  9106 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 9177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 9224 - 9274
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9224 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 9274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 77019 - 76919
Alignment:
Q  169 ttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgca 268  Q
    ||||||||||||||| |||||  ||||||||||||||||| || | |||||||||||||| |||||||  |||||||||| |||||  ||| ||||| ||    
T  77019 ttgatgattaaatgtgaaaat--ttatatattgtgaaagatgtggatatgaagttgtaatggttatattggatgattattgttgattttgatttgctaca 76922  T
Q  269 tat 271  Q
    |||    
T  76921 tat 76919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 370
Target Start/End: Complemental strand, 76869 - 76831
Alignment:
Q  332 taagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  76869 taagttgtaagatgttgatccaaattattggagtcatat 76831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 344 - 299
Alignment:
Q  325 aagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  344 aagttgttaagttgtaagatgttgatccaaattattggagtcatat 299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 8189 - 8261
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||| |||||||||||||| |||||||  ||||||| || |||||| |||||||||||||||    
T  8189 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattgttgttgatgttgacttgctgcatat 8261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 8308 - 8358
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  8308 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 8358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 9680 - 9730
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9680 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 9730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 9561 - 9633
Alignment:
Q  199 ttgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatat 271  Q
    |||||||||| |||  |||||||||||||| |||||||  ||||||||   |||||| |||||||||||||||    
T  9561 ttgtgaaagatgttaatatgaagttgtaatggttatattggatgattaccgttgatgttgacttgctgcatat 9633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 145917 - 145867
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  145917 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatat 145867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 7587 - 7626
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  7587 ttaagttgtaagatgttgatccaaattattggagtcatat 7626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 2769 - 2808
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  2769 ttaagttgtaagatgttgatccaaattattggagtcatat 2808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 268
Target Start/End: Original strand, 8381 - 8486
Alignment:
Q  161 gatttactttgatgattaaatgttaaaatatttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgac 260  Q
    ||||||||||||||||||| ||  | |||||| |||||||||||| || | || ||||||||||||||  || ||| ||||||||||| |||||| ||||    
T  8381 gatttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgac 8478  T
Q  261 ttgctgca 268  Q
    ||| ||||    
T  8479 ttgttgca 8486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 8608 - 8646
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  8608 ttaagttgtaatatgttgatccaaattattggagtcata 8646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 240 - 202
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  240 ttaagttgtaagatgttgatccaaattattggagtcata 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 23660 - 23698
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  23660 ttaagttgtaagatgttgatccaaattattggagtcata 23698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 57930 - 57880
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  57930 gtctaagttgtttaagttgtaagatgttgatccaaattactggagtcatat 57880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 11170 - 11122
Alignment:
Q  322 tctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||| |||||||||||||||  |||||| ||||||||||||||    
T  11170 tctaagttgtgaagttgtaagatgttgttccaaaatattggagtcatat 11122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 22270 - 22222
Alignment:
Q  322 tctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||| |||||||||||||||  |||||| ||||||||||||||    
T  22270 tctaagttgtgaagttgtaagatgttgttccaaaatattggagtcatat 22222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 1990 - 1920
Alignment:
Q  196 atattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgc 267  Q
    ||||| ||||||| |||| ||||| ||| || ||||| ||||||||||||||||||| || |||||||||||    
T  1990 atattatgaaagatgttgatatga-gttatacttgttgtatatgatgattattattgttgttgacttgctgc 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 879 - 929
Alignment:
Q  320 tgtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| |||||||||| ||||| |||||  ||||||||||||||    
T  879 tgtctaagttgtaaagttgtaagttgttattccaagatattggagtcatat 929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 13372 - 13334
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  13372 ttaatttgtaagatgttgatccaaattattggagtcata 13334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 25073 - 25035
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  25073 ttaatttgtaagatgttgatccaaattattggagtcata 25035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 24770 - 24844
Alignment:
Q  192 ttatatattgtgaaagacgttggtatgaagttgtaattgttatatatgatgattattattgatggtgacttgctg 266  Q
    |||||||||||| | || | || ||||||||||||||  || ||| ||||||||||| |||||| ||||||||||    
T  24770 ttatatattgtggatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgctg 24844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 24676 - 24705
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  24676 ttgtaattgttatatatgatgattattatt 24705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 46941 - 46991
Alignment:
Q  321 gtctaagttgtt-aagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||| ||||| ||||||||| ||||||||| ||||||||||||    
T  46941 gtctaagttgtttaagttataagatgttgatccaaattgttggagtcatat 46991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 106410 - 106372
Alignment:
Q  331 ttaagttgtaagatgttaatccaaattattggagtcata 369  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  106410 ttaagttgtaagatgttgatccaagttattggagtcata 106372  T

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Target: scaffold0439 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 11340 - 11295
Alignment:
Q  325 aagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  11340 aagttgtcaagttgtaagttgttgatccaaagtattggagtcatat 11295  T

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Target: scaffold0379 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 4668 - 4713
Alignment:
Q  325 aagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||||||||||  |||||| ||||||| ||||||    
T  4668 aagttgttaagttgtaagatgttgttccaaagtattggattcatat 4713  T

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Target: scaffold0379; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 14714 - 14759
Alignment:
Q  325 aagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    |||||||||||||||||||||||  |||||| ||||||| ||||||    
T  14714 aagttgttaagttgtaagatgttgttccaaagtattggattcatat 14759  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Complemental strand, 9955 - 9926
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  9955 ttgtaattgttatatatgatgattattatt 9926  T

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Target: scaffold0149 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 20821 - 20776
Alignment:
Q  325 aagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||| |||||||||||||||  |||||| ||||||||||||||    
T  20821 aagttgtcaagttgtaagatgttgttccaaagtattggagtcatat 20776  T

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Target: scaffold0142 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 7670 - 7699
Alignment:
Q  222 ttgtaattgttatatatgatgattattatt 251  Q
    ||||||||||||||||||||||||||||||    
T  7670 ttgtaattgttatatatgatgattattatt 7699  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 397670 - 397621
Alignment:
Q  321 gtctaagttgttaagttgtaagatgttaatccaaattattggagtcatat 370  Q
    ||||||||||| |||||||||| ||||| |||||  ||||||||||||||    
T  397670 gtctaagttgtaaagttgtaagttgttattccaagatattggagtcatat 397621  T

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