View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0652_low_23 (Length: 301)

Name: NF0652_low_23
Description: NF0652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0652_low_23
NF0652_low_23
[»] scaffold0057 (2 HSPs)
scaffold0057 (74-301)||(69842-70069)
scaffold0057 (239-298)||(72277-72336)
[»] scaffold0138 (2 HSPs)
scaffold0138 (68-301)||(20933-21166)
scaffold0138 (68-301)||(33949-34181)
[»] chr5 (39 HSPs)
chr5 (68-301)||(17011564-17011797)
chr5 (85-301)||(265874-266090)
chr5 (74-301)||(29448676-29448903)
chr5 (211-301)||(21503975-21504065)
chr5 (68-152)||(10774647-10774730)
chr5 (84-160)||(20469175-20469251)
chr5 (84-160)||(21617927-21618003)
chr5 (165-301)||(20313111-20313248)
chr5 (68-122)||(31456975-31457029)
chr5 (239-301)||(33472716-33472778)
chr5 (202-298)||(17875896-17875993)
chr5 (84-160)||(25249827-25249903)
chr5 (84-160)||(25313611-25313687)
chr5 (202-301)||(36508859-36508959)
chr5 (84-138)||(6551289-6551343)
chr5 (239-297)||(27868727-27868785)
chr5 (68-122)||(30616629-30616683)
chr5 (84-137)||(21300043-21300096)
chr5 (202-298)||(30138199-30138296)
chr5 (239-297)||(9776947-9777005)
chr5 (239-301)||(18419289-18419351)
chr5 (202-267)||(31456721-31456787)
chr5 (239-297)||(37804225-37804283)
chr5 (239-297)||(41875745-41875803)
chr5 (84-137)||(20566546-20566599)
chr5 (74-123)||(21554292-21554341)
chr5 (85-122)||(36508633-36508670)
chr5 (89-137)||(7485002-7485050)
chr5 (241-297)||(24594218-24594274)
chr5 (241-297)||(24668312-24668368)
chr5 (241-297)||(24738081-24738137)
chr5 (241-297)||(24750850-24750906)
chr5 (84-115)||(18744896-18744927)
chr5 (243-301)||(21398956-21399014)
chr5 (68-118)||(21556932-21556982)
chr5 (84-150)||(21914491-21914556)
chr5 (95-160)||(19921616-19921680)
chr5 (84-137)||(31622117-31622170)
chr5 (76-152)||(26832608-26832682)
[»] chr1 (42 HSPs)
chr1 (74-301)||(46197734-46197961)
chr1 (68-301)||(50001312-50001545)
chr1 (74-301)||(29763621-29763848)
chr1 (68-122)||(51336494-51336548)
chr1 (84-160)||(13302879-13302955)
chr1 (68-122)||(12327726-12327780)
chr1 (200-301)||(34392601-34392704)
chr1 (239-297)||(297197-297255)
chr1 (200-301)||(8306440-8306542)
chr1 (84-150)||(24723350-24723415)
chr1 (84-160)||(4595852-4595928)
chr1 (85-137)||(19676711-19676763)
chr1 (85-137)||(21046049-21046101)
chr1 (202-301)||(21188149-21188249)
chr1 (84-122)||(7051921-7051959)
chr1 (200-301)||(17901916-17902018)
chr1 (239-301)||(22130178-22130240)
chr1 (84-182)||(42697739-42697837)
chr1 (202-267)||(44822246-44822312)
chr1 (239-297)||(45574172-45574230)
chr1 (84-137)||(16058313-16058366)
chr1 (84-137)||(42913049-42913102)
chr1 (202-301)||(7052129-7052229)
chr1 (229-301)||(24723604-24723676)
chr1 (85-160)||(21708127-21708201)
chr1 (85-160)||(21712670-21712744)
chr1 (241-296)||(23194667-23194722)
chr1 (84-122)||(21239048-21239086)
chr1 (200-301)||(21239157-21239259)
chr1 (85-137)||(20633631-20633683)
chr1 (84-160)||(22350694-22350769)
chr1 (239-295)||(28313192-28313248)
chr1 (84-160)||(45755497-45755573)
chr1 (250-301)||(6834002-6834053)
chr1 (84-150)||(7320593-7320658)
chr1 (85-115)||(22145666-22145696)
chr1 (74-112)||(24007214-24007252)
chr1 (84-122)||(51324519-51324557)
chr1 (68-105)||(21995647-21995684)
chr1 (84-121)||(24727383-24727420)
chr1 (84-160)||(41373348-41373423)
chr1 (84-160)||(48444369-48444444)
[»] scaffold0034 (2 HSPs)
scaffold0034 (74-301)||(29205-29432)
scaffold0034 (86-160)||(120931-121005)
[»] chr7 (85 HSPs)
chr7 (74-297)||(29052171-29052394)
chr7 (84-301)||(32160199-32160416)
chr7 (74-301)||(16549994-16550218)
chr7 (74-301)||(16615444-16615668)
chr7 (239-301)||(1856553-1856615)
chr7 (239-299)||(13917725-13917785)
chr7 (202-298)||(14274062-14274159)
chr7 (84-160)||(35771440-35771516)
chr7 (239-301)||(25926452-25926514)
chr7 (84-160)||(4071797-4071873)
chr7 (84-160)||(14218894-14218970)
chr7 (84-191)||(15289052-15289158)
chr7 (84-150)||(48807324-48807390)
chr7 (84-160)||(12127162-12127237)
chr7 (202-301)||(12754781-12754881)
chr7 (85-137)||(13147472-13147524)
chr7 (239-301)||(4325933-4325995)
chr7 (84-150)||(12754611-12754676)
chr7 (200-301)||(13315195-13315297)
chr7 (85-150)||(16078317-16078382)
chr7 (84-137)||(20586352-20586405)
chr7 (85-137)||(8851159-8851211)
chr7 (85-137)||(12372274-12372326)
chr7 (85-137)||(12465260-12465312)
chr7 (86-158)||(14928290-14928362)
chr7 (86-158)||(15351756-15351828)
chr7 (84-138)||(4690662-4690716)
chr7 (239-297)||(14105580-14105638)
chr7 (239-297)||(14415597-14415655)
chr7 (239-297)||(16108011-16108069)
chr7 (239-297)||(23664275-23664333)
chr7 (239-301)||(44190369-44190431)
chr7 (239-296)||(11304030-11304087)
chr7 (85-137)||(11067468-11067520)
chr7 (85-137)||(12322930-12322982)
chr7 (86-158)||(14259373-14259445)
chr7 (84-160)||(15095636-15095711)
chr7 (85-137)||(20620286-20620338)
chr7 (68-160)||(30820134-30820224)
chr7 (85-137)||(32433589-32433641)
chr7 (83-170)||(11054681-11054767)
chr7 (211-285)||(36300766-36300841)
chr7 (239-301)||(13648119-13648181)
chr7 (239-297)||(14188446-14188504)
chr7 (239-297)||(16462910-16462968)
chr7 (84-138)||(18955329-18955383)
chr7 (200-301)||(19282882-19282984)
chr7 (200-301)||(38295438-38295540)
chr7 (202-295)||(42565948-42566042)
chr7 (84-122)||(47974819-47974857)
chr7 (84-137)||(14180397-14180450)
chr7 (239-296)||(17505117-17505174)
chr7 (239-296)||(17548040-17548097)
chr7 (68-105)||(19485956-19485993)
chr7 (84-137)||(20214147-20214200)
chr7 (84-137)||(24269946-24269999)
chr7 (85-122)||(33002168-33002205)
chr7 (84-137)||(44374843-44374896)
chr7 (84-137)||(44383708-44383761)
chr7 (84-137)||(46386087-46386140)
chr7 (89-137)||(10277327-10277375)
chr7 (84-152)||(13698637-13698705)
chr7 (199-301)||(18570481-18570584)
chr7 (202-301)||(47975007-47975107)
chr7 (84-115)||(8488093-8488124)
chr7 (84-115)||(8513752-8513783)
chr7 (84-115)||(16250221-16250252)
chr7 (258-301)||(19195028-19195071)
chr7 (258-297)||(29797392-29797431)
chr7 (258-297)||(29801211-29801250)
chr7 (86-160)||(32302203-32302278)
chr7 (84-122)||(10658850-10658888)
chr7 (239-297)||(11661947-11662005)
chr7 (239-301)||(13256530-13256592)
chr7 (85-119)||(16999454-16999488)
chr7 (84-138)||(18990846-18990900)
chr7 (243-297)||(25942312-25942366)
chr7 (74-160)||(36685135-36685219)
chr7 (239-301)||(39431340-39431402)
chr7 (85-115)||(43276744-43276774)
chr7 (85-122)||(18074647-18074684)
chr7 (84-137)||(36704570-36704623)
chr7 (200-283)||(8930881-8930965)
chr7 (84-160)||(15140191-15140266)
chr7 (68-100)||(46579742-46579774)
[»] chr3 (73 HSPs)
chr3 (74-301)||(16979748-16979975)
chr3 (85-301)||(22652609-22652825)
chr3 (200-300)||(45803451-45803552)
chr3 (239-301)||(5224160-5224222)
chr3 (200-298)||(13522463-13522561)
chr3 (239-301)||(26054587-26054649)
chr3 (165-301)||(48043557-48043694)
chr3 (68-135)||(36528869-36528936)
chr3 (239-301)||(15465932-15465994)
chr3 (165-301)||(25201972-25202107)
chr3 (84-160)||(33565064-33565140)
chr3 (200-299)||(48631170-48631270)
chr3 (69-122)||(15446852-15446905)
chr3 (88-160)||(11885560-11885632)
chr3 (84-160)||(13185872-13185948)
chr3 (84-160)||(35960927-35961003)
chr3 (68-131)||(3263946-3264009)
chr3 (201-301)||(3527270-3527372)
chr3 (239-297)||(13437080-13437138)
chr3 (239-301)||(43549808-43549870)
chr3 (68-137)||(24177719-24177788)
chr3 (84-137)||(40807996-40808049)
chr3 (84-137)||(44274418-44274471)
chr3 (84-160)||(11563702-11563778)
chr3 (85-137)||(17044966-17045018)
chr3 (85-137)||(17047126-17047178)
chr3 (85-137)||(17541434-17541486)
chr3 (85-137)||(22306583-22306635)
chr3 (239-297)||(42369-42427)
chr3 (239-297)||(3803655-3803713)
chr3 (84-122)||(5200242-5200280)
chr3 (239-297)||(12305904-12305962)
chr3 (84-138)||(15566743-15566797)
chr3 (84-122)||(16050942-16050980)
chr3 (86-160)||(18699431-18699505)
chr3 (84-122)||(19568207-19568245)
chr3 (86-160)||(22758835-22758909)
chr3 (239-297)||(29544186-29544244)
chr3 (84-122)||(40812848-40812886)
chr3 (239-297)||(46722739-46722797)
chr3 (239-297)||(55291754-55291812)
chr3 (85-158)||(11259411-11259483)
chr3 (84-137)||(17518872-17518925)
chr3 (84-137)||(17533734-17533787)
chr3 (84-137)||(49900730-49900783)
chr3 (84-160)||(42323970-42324046)
chr3 (239-298)||(6820010-6820069)
chr3 (239-297)||(10555148-10555206)
chr3 (239-297)||(18890265-18890323)
chr3 (239-297)||(54521604-54521662)
chr3 (88-137)||(14508847-14508896)
chr3 (68-105)||(37641487-37641524)
chr3 (202-297)||(6805043-6805139)
chr3 (89-137)||(10311527-10311575)
chr3 (85-137)||(17539106-17539158)
chr3 (89-160)||(17694045-17694115)
chr3 (166-213)||(21845732-21845778)
chr3 (202-267)||(3160742-3160808)
chr3 (84-122)||(9510915-9510953)
chr3 (84-122)||(9518890-9518928)
chr3 (84-122)||(10563723-10563761)
chr3 (68-118)||(14967203-14967253)
chr3 (239-297)||(16324693-16324751)
chr3 (86-160)||(43888756-43888830)
chr3 (239-301)||(43929228-43929290)
chr3 (74-152)||(52988847-52988923)
chr3 (84-137)||(12509349-12509402)
chr3 (85-122)||(15931508-15931545)
chr3 (85-122)||(41172371-41172408)
chr3 (85-150)||(49968859-49968923)
chr3 (68-105)||(52465354-52465391)
chr3 (200-267)||(12155141-12155209)
chr3 (85-137)||(35354602-35354654)
[»] chr2 (56 HSPs)
chr2 (68-301)||(21080952-21081185)
chr2 (68-301)||(25184025-25184258)
chr2 (68-301)||(21915460-21915693)
chr2 (93-301)||(18357975-18358183)
chr2 (200-300)||(12626546-12626647)
chr2 (84-160)||(14694303-14694379)
chr2 (84-152)||(22501956-22502024)
chr2 (84-152)||(22509890-22509958)
chr2 (84-170)||(27852635-27852721)
chr2 (84-160)||(25142181-25142257)
chr2 (74-137)||(40912320-40912383)
chr2 (68-122)||(357896-357950)
chr2 (200-301)||(19647070-19647172)
chr2 (239-301)||(31345957-31346019)
chr2 (165-297)||(36734530-36734664)
chr2 (202-297)||(1383768-1383864)
chr2 (84-160)||(3539814-3539890)
chr2 (84-160)||(24516164-24516239)
chr2 (202-301)||(45535762-45535862)
chr2 (200-301)||(149620-149722)
chr2 (239-297)||(23338552-23338610)
chr2 (84-137)||(17307486-17307539)
chr2 (85-137)||(5031129-5031181)
chr2 (85-137)||(24780840-24780892)
chr2 (85-160)||(2523747-2523821)
chr2 (84-159)||(25046096-25046171)
chr2 (239-301)||(41301082-41301144)
chr2 (84-160)||(5986154-5986230)
chr2 (85-137)||(9975929-9975981)
chr2 (211-267)||(45535666-45535722)
chr2 (239-297)||(10684085-10684143)
chr2 (239-297)||(13100887-13100945)
chr2 (100-150)||(18390229-18390279)
chr2 (239-297)||(20262001-20262059)
chr2 (239-297)||(21072841-21072899)
chr2 (86-160)||(23068408-23068482)
chr2 (202-267)||(24884231-24884297)
chr2 (211-297)||(28652677-28652763)
chr2 (239-297)||(43707200-43707258)
chr2 (84-137)||(19201199-19201252)
chr2 (68-105)||(34858175-34858212)
chr2 (68-105)||(34873237-34873274)
chr2 (85-137)||(24436648-24436700)
chr2 (74-110)||(27484478-27484514)
chr2 (89-137)||(37270699-37270747)
chr2 (87-122)||(1383545-1383580)
chr2 (258-301)||(28345209-28345252)
chr2 (68-103)||(34491223-34491258)
chr2 (85-160)||(39683190-39683264)
chr2 (239-297)||(20590435-20590493)
chr2 (84-122)||(44072572-44072610)
chr2 (85-137)||(22251448-22251500)
chr2 (211-267)||(22501730-22501786)
chr2 (211-267)||(22509664-22509720)
chr2 (84-152)||(24792758-24792824)
chr2 (84-160)||(34401735-34401810)
[»] chr8 (54 HSPs)
chr8 (68-301)||(23478918-23479151)
chr8 (68-297)||(19880663-19880891)
chr8 (74-301)||(16198672-16198899)
chr8 (69-297)||(26454546-26454776)
chr8 (84-301)||(25657513-25657730)
chr8 (74-224)||(17158952-17159102)
chr8 (211-297)||(22483620-22483706)
chr8 (239-296)||(14397063-14397120)
chr8 (84-160)||(20022039-20022115)
chr8 (200-299)||(20879311-20879411)
chr8 (200-285)||(22610380-22610466)
chr8 (84-160)||(22254743-22254819)
chr8 (84-160)||(36727037-36727113)
chr8 (84-160)||(45469218-45469294)
chr8 (84-159)||(23899986-23900061)
chr8 (84-138)||(4380616-4380670)
chr8 (200-285)||(23884021-23884107)
chr8 (200-301)||(36732598-36732700)
chr8 (74-115)||(12577901-12577942)
chr8 (84-160)||(17906848-17906923)
chr8 (84-160)||(31722492-31722568)
chr8 (84-122)||(5761548-5761586)
chr8 (239-297)||(8413901-8413959)
chr8 (85-191)||(17218649-17218754)
chr8 (84-122)||(22532131-22532169)
chr8 (84-122)||(22536816-22536854)
chr8 (84-137)||(6101752-6101805)
chr8 (85-138)||(18761447-18761500)
chr8 (84-137)||(20397509-20397562)
chr8 (202-298)||(20517172-20517269)
chr8 (85-137)||(20083638-20083690)
chr8 (211-267)||(21676717-21676773)
chr8 (85-137)||(42817907-42817959)
chr8 (84-151)||(23419427-23419494)
chr8 (239-298)||(25483594-25483653)
chr8 (243-297)||(19882789-19882843)
chr8 (84-150)||(22317910-22317975)
chr8 (202-294)||(22344966-22345059)
chr8 (202-294)||(22356626-22356719)
chr8 (85-122)||(39936007-39936044)
chr8 (85-137)||(19140765-19140816)
chr8 (84-160)||(19700138-19700214)
chr8 (84-160)||(23948240-23948316)
chr8 (89-137)||(37292705-37292753)
chr8 (85-152)||(13660854-13660920)
chr8 (85-152)||(13719497-13719563)
chr8 (84-115)||(22610266-22610297)
chr8 (68-115)||(41680116-41680163)
chr8 (89-119)||(34758885-34758915)
chr8 (89-122)||(6573060-6573093)
chr8 (89-137)||(6202776-6202824)
chr8 (68-100)||(22237033-22237065)
chr8 (84-152)||(22583659-22583726)
chr8 (84-152)||(23889785-23889852)
[»] chr6 (43 HSPs)
chr6 (68-301)||(15900637-15900870)
chr6 (68-301)||(15173436-15173669)
chr6 (145-301)||(15891629-15891785)
chr6 (239-301)||(23415742-23415804)
chr6 (84-160)||(18928658-18928734)
chr6 (243-301)||(27557500-27557558)
chr6 (200-301)||(29045100-29045202)
chr6 (84-160)||(15890711-15890786)
chr6 (68-160)||(27329964-27330055)
chr6 (68-160)||(27390704-27390795)
chr6 (200-285)||(1818804-1818890)
chr6 (85-137)||(7827972-7828024)
chr6 (84-152)||(12041619-12041687)
chr6 (85-137)||(23150287-23150339)
chr6 (84-160)||(31731903-31731979)
chr6 (85-160)||(19655231-19655305)
chr6 (86-137)||(24267849-24267900)
chr6 (85-152)||(27572122-27572188)
chr6 (239-297)||(13765188-13765246)
chr6 (84-138)||(15998888-15998942)
chr6 (86-160)||(19772667-19772741)
chr6 (239-297)||(23956704-23956762)
chr6 (239-297)||(28288659-28288717)
chr6 (239-297)||(31021874-31021932)
chr6 (85-137)||(18703568-18703620)
chr6 (85-137)||(18709503-18709555)
chr6 (239-295)||(23226010-23226066)
chr6 (84-160)||(23501650-23501725)
chr6 (85-160)||(19401072-19401146)
chr6 (239-297)||(12942971-12943029)
chr6 (202-267)||(18585549-18585615)
chr6 (88-122)||(18585820-18585854)
chr6 (86-160)||(22806716-22806790)
chr6 (74-152)||(27852193-27852269)
chr6 (84-122)||(28948590-28948628)
chr6 (85-122)||(27125477-27125514)
chr6 (68-104)||(28103431-28103467)
chr6 (239-298)||(20556185-20556244)
chr6 (85-160)||(26923659-26923733)
chr6 (215-301)||(10446048-10446134)
chr6 (86-160)||(15704565-15704639)
chr6 (89-119)||(29625201-29625231)
chr6 (84-116)||(30673401-30673433)
[»] chr4 (49 HSPs)
chr4 (85-301)||(10694245-10694461)
chr4 (68-301)||(40620368-40620601)
chr4 (85-295)||(10908011-10908221)
chr4 (68-301)||(15008804-15009032)
chr4 (165-301)||(35660724-35660862)
chr4 (84-160)||(9924131-9924207)
chr4 (200-294)||(9622330-9622425)
chr4 (68-122)||(14186973-14187027)
chr4 (200-301)||(16296707-16296809)
chr4 (84-150)||(11478652-11478718)
chr4 (84-137)||(15115222-15115275)
chr4 (84-160)||(9870443-9870519)
chr4 (85-137)||(11425943-11425995)
chr4 (202-301)||(19434775-19434875)
chr4 (85-137)||(25091653-25091705)
chr4 (85-137)||(53630474-53630526)
chr4 (84-182)||(21151-21249)
chr4 (84-122)||(19434558-19434596)
chr4 (84-122)||(21062656-21062694)
chr4 (239-297)||(28386085-28386143)
chr4 (239-297)||(33849584-33849642)
chr4 (239-297)||(36038652-36038710)
chr4 (239-297)||(49547096-49547154)
chr4 (85-122)||(35811376-35811413)
chr4 (68-152)||(10057648-10057730)
chr4 (85-137)||(10356436-10356488)
chr4 (202-301)||(14549486-14549586)
chr4 (84-160)||(37019648-37019723)
chr4 (239-298)||(15344775-15344834)
chr4 (84-159)||(15613069-15613143)
chr4 (84-159)||(51993540-51993614)
chr4 (84-122)||(2424386-2424424)
chr4 (84-122)||(14549775-14549813)
chr4 (239-297)||(15534963-15535021)
chr4 (239-297)||(16277440-16277498)
chr4 (239-301)||(18230578-18230640)
chr4 (239-297)||(53387050-53387108)
chr4 (89-137)||(6633541-6633589)
chr4 (202-301)||(18462859-18462959)
chr4 (85-137)||(19610324-19610376)
chr4 (85-137)||(42875797-42875849)
chr4 (239-298)||(12611751-12611810)
chr4 (89-160)||(15011474-15011545)
chr4 (84-122)||(14186067-14186105)
chr4 (202-267)||(14477502-14477568)
chr4 (85-122)||(16998540-16998577)
chr4 (84-160)||(19243577-19243652)
chr4 (84-152)||(27996778-27996844)
chr4 (89-137)||(46001535-46001583)
[»] scaffold0436 (1 HSPs)
scaffold0436 (74-301)||(8796-9023)
[»] scaffold0515 (1 HSPs)
scaffold0515 (74-296)||(4877-5092)
[»] scaffold0306 (1 HSPs)
scaffold0306 (74-296)||(4877-5092)
[»] scaffold0083 (3 HSPs)
scaffold0083 (74-301)||(1773-2000)
scaffold0083 (84-122)||(5044-5082)
scaffold0083 (84-122)||(10754-10792)
[»] scaffold0046 (1 HSPs)
scaffold0046 (74-301)||(21766-21993)
[»] scaffold0462 (1 HSPs)
scaffold0462 (68-301)||(11059-11292)
[»] scaffold0058 (3 HSPs)
scaffold0058 (68-217)||(6288-6437)
scaffold0058 (239-301)||(39965-40027)
scaffold0058 (202-267)||(59771-59837)
[»] scaffold0061 (2 HSPs)
scaffold0061 (166-297)||(14667-14798)
scaffold0061 (166-297)||(23725-23856)
[»] scaffold0439 (1 HSPs)
scaffold0439 (200-298)||(12080-12178)
[»] scaffold0035 (2 HSPs)
scaffold0035 (165-301)||(43866-44003)
scaffold0035 (165-301)||(39174-39311)
[»] scaffold0113 (1 HSPs)
scaffold0113 (84-301)||(35328-35543)
[»] scaffold0200 (1 HSPs)
scaffold0200 (239-301)||(18431-18493)
[»] scaffold0802 (1 HSPs)
scaffold0802 (84-160)||(4708-4784)
[»] scaffold0293 (1 HSPs)
scaffold0293 (239-299)||(19452-19512)
[»] scaffold0117 (1 HSPs)
scaffold0117 (239-301)||(42509-42571)
[»] scaffold0205 (2 HSPs)
scaffold0205 (165-301)||(5695-5832)
scaffold0205 (86-160)||(30631-30705)
[»] scaffold0086 (1 HSPs)
scaffold0086 (165-301)||(35565-35702)
[»] scaffold0628 (1 HSPs)
scaffold0628 (84-160)||(1057-1133)
[»] scaffold0220 (1 HSPs)
scaffold0220 (84-160)||(19931-20007)
[»] scaffold0026 (2 HSPs)
scaffold0026 (202-301)||(21958-22058)
scaffold0026 (84-137)||(146723-146776)
[»] scaffold0004 (4 HSPs)
scaffold0004 (89-160)||(110151-110222)
scaffold0004 (200-301)||(66194-66294)
scaffold0004 (84-118)||(328287-328321)
scaffold0004 (85-115)||(73109-73139)
[»] scaffold0453 (1 HSPs)
scaffold0453 (239-297)||(7163-7221)
[»] scaffold0051 (1 HSPs)
scaffold0051 (239-301)||(31981-32042)
[»] scaffold0071 (1 HSPs)
scaffold0071 (69-122)||(15287-15340)
[»] scaffold1941 (1 HSPs)
scaffold1941 (84-160)||(116-191)
[»] scaffold0555 (1 HSPs)
scaffold0555 (213-297)||(8925-9009)
[»] scaffold0037 (2 HSPs)
scaffold0037 (83-150)||(117805-117873)
scaffold0037 (84-170)||(112965-113052)
[»] scaffold0203 (1 HSPs)
scaffold0203 (84-138)||(17939-17993)
[»] scaffold0031 (1 HSPs)
scaffold0031 (200-301)||(127459-127561)
[»] scaffold0001 (5 HSPs)
scaffold0001 (239-297)||(169281-169339)
scaffold0001 (239-297)||(176634-176692)
scaffold0001 (84-137)||(77687-77740)
scaffold0001 (85-137)||(31994-32046)
scaffold0001 (85-137)||(37301-37353)
[»] scaffold1766 (1 HSPs)
scaffold1766 (84-160)||(695-770)
[»] scaffold1633 (1 HSPs)
scaffold1633 (85-137)||(1205-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (85-137)||(468-520)
[»] scaffold0819 (1 HSPs)
scaffold0819 (68-152)||(5352-5435)
[»] scaffold0577 (1 HSPs)
scaffold0577 (68-160)||(9038-9128)
[»] scaffold0411 (1 HSPs)
scaffold0411 (84-160)||(13416-13491)
[»] scaffold0077 (2 HSPs)
scaffold0077 (85-137)||(34339-34391)
scaffold0077 (84-159)||(5929-6003)
[»] scaffold0036 (1 HSPs)
scaffold0036 (85-137)||(78185-78237)
[»] scaffold0019 (2 HSPs)
scaffold0019 (85-137)||(24131-24183)
scaffold0019 (86-160)||(30048-30122)
[»] scaffold0008 (1 HSPs)
scaffold0008 (84-160)||(135503-135578)
[»] scaffold0043 (2 HSPs)
scaffold0043 (85-160)||(27954-28029)
scaffold0043 (85-160)||(42812-42887)
[»] scaffold1256 (1 HSPs)
scaffold1256 (84-138)||(2199-2253)
[»] scaffold0956 (2 HSPs)
scaffold0956 (239-301)||(2248-2310)
scaffold0956 (88-137)||(2555-2604)
[»] scaffold0594 (1 HSPs)
scaffold0594 (200-301)||(2076-2178)
[»] scaffold0589 (1 HSPs)
scaffold0589 (84-182)||(4340-4438)
[»] scaffold0422 (1 HSPs)
scaffold0422 (239-297)||(3805-3863)
[»] scaffold0364 (1 HSPs)
scaffold0364 (239-297)||(8005-8063)
[»] scaffold0213 (1 HSPs)
scaffold0213 (84-138)||(19206-19260)
[»] scaffold0151 (2 HSPs)
scaffold0151 (239-301)||(9932-9994)
scaffold0151 (84-160)||(31086-31161)
[»] scaffold0075 (1 HSPs)
scaffold0075 (84-182)||(60850-60948)
[»] scaffold0056 (1 HSPs)
scaffold0056 (84-150)||(67108-67174)
[»] scaffold0032 (1 HSPs)
scaffold0032 (84-138)||(61847-61901)
[»] scaffold0021 (2 HSPs)
scaffold0021 (202-267)||(16977-17043)
scaffold0021 (202-267)||(26508-26574)
[»] scaffold0632 (1 HSPs)
scaffold0632 (68-137)||(1165-1234)
[»] scaffold0601 (1 HSPs)
scaffold0601 (85-122)||(196-233)
[»] scaffold0256 (1 HSPs)
scaffold0256 (83-152)||(1845-1913)
[»] scaffold0241 (1 HSPs)
scaffold0241 (84-137)||(3182-3235)
[»] scaffold0207 (1 HSPs)
scaffold0207 (84-137)||(13391-13444)
[»] scaffold0149 (3 HSPs)
scaffold0149 (84-137)||(29572-29625)
scaffold0149 (211-301)||(21376-21466)
scaffold0149 (84-122)||(21626-21664)
[»] scaffold0111 (2 HSPs)
scaffold0111 (88-137)||(5383-5432)
scaffold0111 (86-137)||(12534-12585)
[»] scaffold0064 (1 HSPs)
scaffold0064 (85-122)||(58761-58798)
[»] scaffold0020 (2 HSPs)
scaffold0020 (84-137)||(168998-169051)
scaffold0020 (85-137)||(143611-143663)
[»] scaffold1939 (1 HSPs)
scaffold1939 (200-263)||(1-65)
[»] scaffold0737 (1 HSPs)
scaffold0737 (85-137)||(4714-4766)
[»] scaffold0251 (1 HSPs)
scaffold0251 (84-160)||(20085-20160)
[»] scaffold0217 (1 HSPs)
scaffold0217 (202-301)||(28550-28650)
[»] scaffold0175 (1 HSPs)
scaffold0175 (84-160)||(8620-8695)
[»] scaffold0123 (1 HSPs)
scaffold0123 (84-160)||(7254-7330)
[»] scaffold0047 (1 HSPs)
scaffold0047 (85-137)||(79049-79101)
[»] scaffold0671 (1 HSPs)
scaffold0671 (84-159)||(4918-4993)
[»] scaffold0292 (1 HSPs)
scaffold0292 (86-157)||(7535-7606)
[»] scaffold0041 (1 HSPs)
scaffold0041 (90-137)||(5712-5759)
[»] scaffold0002 (1 HSPs)
scaffold0002 (84-159)||(398540-398615)
[»] scaffold1276 (1 HSPs)
scaffold1276 (239-301)||(977-1039)
[»] scaffold0676 (1 HSPs)
scaffold0676 (200-301)||(2650-2752)
[»] scaffold0516 (1 HSPs)
scaffold0516 (84-122)||(5304-5342)
[»] scaffold0334 (2 HSPs)
scaffold0334 (84-122)||(533-571)
scaffold0334 (239-301)||(1962-2024)
[»] scaffold0230 (2 HSPs)
scaffold0230 (88-122)||(6688-6722)
scaffold0230 (202-267)||(6910-6976)
[»] scaffold0156 (1 HSPs)
scaffold0156 (74-152)||(16590-16667)
[»] scaffold0148 (1 HSPs)
scaffold0148 (200-301)||(8677-8779)
[»] scaffold0104 (2 HSPs)
scaffold0104 (74-152)||(14942-15020)
scaffold0104 (74-152)||(16962-17040)
[»] scaffold0070 (1 HSPs)
scaffold0070 (239-297)||(8932-8990)
[»] scaffold0040 (2 HSPs)
scaffold0040 (84-122)||(106050-106088)
scaffold0040 (84-160)||(13032-13107)
[»] scaffold0018 (1 HSPs)
scaffold0018 (86-160)||(21672-21746)
[»] scaffold0407 (1 HSPs)
scaffold0407 (85-122)||(11274-11311)
[»] scaffold0153 (2 HSPs)
scaffold0153 (68-105)||(5329-5366)
scaffold0153 (68-105)||(12349-12386)
[»] scaffold0139 (1 HSPs)
scaffold0139 (74-115)||(23556-23597)
[»] scaffold0007 (1 HSPs)
scaffold0007 (202-298)||(18976-19073)
[»] scaffold0042 (1 HSPs)
scaffold0042 (84-160)||(29365-29441)
[»] scaffold1439 (1 HSPs)
scaffold1439 (239-298)||(916-975)
[»] scaffold0080 (1 HSPs)
scaffold0080 (85-160)||(21793-21867)
[»] scaffold0065 (1 HSPs)
scaffold0065 (84-159)||(52543-52618)
[»] scaffold0625 (1 HSPs)
scaffold0625 (84-138)||(5860-5914)
[»] scaffold0285 (1 HSPs)
scaffold0285 (84-122)||(19768-19806)
[»] scaffold0106 (1 HSPs)
scaffold0106 (243-301)||(21821-21879)
[»] scaffold0096 (1 HSPs)
scaffold0096 (94-160)||(22075-22141)
[»] scaffold0092 (1 HSPs)
scaffold0092 (202-267)||(38558-38624)
[»] scaffold0028 (1 HSPs)
scaffold0028 (86-160)||(3053-3126)
[»] scaffold0016 (1 HSPs)
scaffold0016 (239-301)||(174261-174323)
[»] scaffold0010 (1 HSPs)
scaffold0010 (84-122)||(126304-126341)
[»] scaffold0003 (1 HSPs)
scaffold0003 (84-182)||(96354-96451)
[»] scaffold0112 (1 HSPs)
scaffold0112 (84-137)||(2889-2942)
[»] scaffold0686 (1 HSPs)
scaffold0686 (68-100)||(1475-1507)
[»] scaffold0452 (1 HSPs)
scaffold0452 (112-160)||(12649-12697)
[»] scaffold0379 (1 HSPs)
scaffold0379 (84-152)||(3892-3959)
[»] scaffold0254 (1 HSPs)
scaffold0254 (84-160)||(21625-21700)
[»] scaffold0174 (2 HSPs)
scaffold0174 (71-115)||(5476-5520)
scaffold0174 (76-152)||(13624-13698)
[»] scaffold0029 (1 HSPs)
scaffold0029 (84-160)||(12164-12239)
[»] scaffold0011 (1 HSPs)
scaffold0011 (88-152)||(126776-126840)


Alignment Details
Target: scaffold0057 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 69842 - 70069
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  69842 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatg 69941  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | ||    
T  69942 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaaaaaaaatag 70041  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  70042 gttgagtttcctatcaaatttgggattt 70069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 72336 - 72277
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  72336 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 72277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 206; Significance: 1e-112; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 21166 - 20933
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||    
T  21166 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 21067  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  21066 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 20967  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  20966 acataggttgagtttcctatcaaatttgggattt 20933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 34181 - 33949
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||    
T  34181 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 34082  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| | |||||||||    
T  34081 ttgatgattagagaaattaggttttggtttggaattgattgttaaacagtaggtaattcaatgaattaacataagaattgaagttcagaccgtagaataa 33982  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||| |||||||| |||||    
T  33981 acataggttgagtttccta-caaatttgagattt 33949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 17011797 - 17011564
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||    
T  17011797 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 17011698  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  17011697 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 17011598  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  17011597 acataggttgagtttcctatcaaatttgggattt 17011564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 85 - 301
Target Start/End: Complemental strand, 266090 - 265874
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaat 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  266090 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtggtaattttgatgattagagaaat 265991  T
Q  185 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  265990 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 265891  T
Q  285 tatcaaatttgggattt 301  Q
    |||||||||||||||||    
T  265890 tatcaaatttgggattt 265874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 29448903 - 29448676
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  29448903 atcatcaatactaaggtaatgatgagactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtggtaattttgatg 29448804  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  29448803 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaaaccaatgaattaacataagaattgaagttcaggctgtagaataaacatag 29448704  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||| |||||    
T  29448703 gttgagtttcctatcaaatttgagattt 29448676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 21504065 - 21503975
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||| |||||||||| || ||||||||||||||||  ||||||||||||    
T  21504065 aaagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggattt 21503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 10774647 - 10774730
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| |||||||||||||    
T  10774647 ccgccgatcatcaatactaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacatg 10774730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 20469175 - 20469251
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| |||||||| || |||||||| | |||||||    
T  20469175 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggt 20469251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 21617927 - 21618003
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||||||||| | |||||||    
T  21617927 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggt 21618003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 301
Target Start/End: Complemental strand, 20313248 - 20313111
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattg-ttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| | ||| |||||  ||| || |||||||   ||  |||||| ||||| | | ||||    
T  20313248 attttgatgattagagaaattagattttgatttggaattgattgctaaaaaagtagagaattcaatgaattagtgtacaaattgatgttcaagttataga 20313149  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| || |||||||||||||  ||||||||||||    
T  20313148 ataaacatagattgagtttcctattgaatttgggattt 20313111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 31457029 - 31456975
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  31457029 ccgccgatcatcaatactaaggtaagggtgagactaactttctctaattttaagt 31456975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 33472716 - 33472778
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  33472716 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 33472778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 298
Target Start/End: Complemental strand, 17875993 - 17875896
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| ||||||||||  | ||||   ||||| ||||||||||||||    
T  17875993 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataacaataggtgatgtttcttatcaaatttggga 17875896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 25249827 - 25249903
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||| |||||||| |||| ||||| ||||| || |||||||||||| || |||||||||| |||||||    
T  25249827 ctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggt 25249903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 25313611 - 25313687
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||| |||||||| |||| ||||| ||||| || |||||||||||| || |||||||||| |||||||    
T  25313611 ctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggt 25313687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 36508859 - 36508959
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||| ||| |||||||||| || ||||| |||||||||||||||||||||||    
T  36508859 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 36508958  T
Q  301 t 301  Q
    |    
T  36508959 t 36508959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 6551289 - 6551343
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  6551289 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa 6551343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 27868727 - 27868785
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  27868727 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 27868785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 30616683 - 30616629
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||| || ||||||||||||||| |||||||||||||||||||    
T  30616683 ccgccgatcatcaatattatggtaagggtgggactgactttctctaattctaagt 30616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 21300043 - 21300096
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||| |||||  | |||||||||||    
T  21300043 ctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaa 21300096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 298
Target Start/End: Original strand, 30138199 - 30138296
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| ||||| |||||| |||||||||||| ||  ||| ||||||| |||||||||| || ||||| ||||||| | |||||||||||    
T  30138199 ttgattgttgaaagtgtaggcaatccaatgaattaacatatgatatgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttggga 30138296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 9777005 - 9776947
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||| ||||||||||||||||||||    
T  9777005 taagaatcgatgttcagattgtagaataaacataggttaagtttcctatcaaatttggg 9776947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 18419351 - 18419289
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || || || |||||||||||||||||| |||||    
T  18419351 taagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttgagattt 18419289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 31456787 - 31456721
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| ||||||||| || |||||||||||| ||||||| ||||||| ||||||||||    
T  31456787 ttgattgttgaaagtgtaggtaattcaatgaattaacatatgaattgatgttcaggttgtagaataa 31456721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 37804225 - 37804283
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  37804225 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 37804283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 41875745 - 41875803
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || |||||| ||||||||||| || ||||| ||||||||||||||||||||    
T  41875745 taagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggg 41875803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 20566599 - 20566546
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||| ||||||||||||||||||| ||||  | |||||||||||    
T  20566599 ctaaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaa 20566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 21554292 - 21554341
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagta 123  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| ||||    
T  21554292 atcatcaatactaaggtaagggtgggactaaccttcagtaattctgagta 21554341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 36508633 - 36508670
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagt 36508670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 7485050 - 7485002
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 7485002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 24594218 - 24594274
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24594218 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24594274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 24668312 - 24668368
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24668312 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24668368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 24738081 - 24738137
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24738081 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24738137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 24750850 - 24750906
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24750850 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24750906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Complemental strand, 18744927 - 18744896
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  18744927 ctaaggtaagggtgggactaactttctctaat 18744896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 21398956 - 21399014
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||| ||||||| ||||||||||||| |||  |||||| |||| |||||||||||||    
T  21398956 aattgatgttcaggttgtagaataaacataggaagagttttctataaaatttgggattt 21399014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 21556932 - 21556982
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattct 118  Q
    ||||| |||||||||||||||||||||||| ||||||| |||  |||||||    
T  21556932 ccgccgatcatcaatactaaggtaagggtgagactaaccttcagtaattct 21556982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 21914491 - 21914556
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    |||||||||||||||||||||| |||  ||||||| ||| || |||||||||||| || ||||||||    
T  21914491 ctaaggtaagggtgggactaaccttcaataattctgagt-atgtaattctgaaaattggatttaaca 21914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 19921680 - 19921616
Alignment:
Q  95 gtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||| ||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  19921680 gtgggactacctttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 19921616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 31622170 - 31622117
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||| ||||||||||||||| || ||  | |||||||||||    
T  31622170 ctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 31622117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 26832682 - 26832608
Alignment:
Q  76 catcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||||| ||||||||||||| |||| |||  ||||||||||| || | |||||||| | |||||||||||||    
T  26832682 catcaatactacggtaagggtgggagtaaccttcaataattctaagt-atgtgattctgaaga-tgaatttaacatg 26832608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 46197734 - 46197961
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  46197734 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatttaggtggtaattttgatg 46197833  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  46197834 attagagaaattatgttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacatag 46197933  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  46197934 gttgagtttcctatcaaatttgggattt 46197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 50001545 - 50001312
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||    
T  50001545 ccgccgatcatcaatactaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 50001446  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  50001445 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 50001346  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| | ||||||||||||||||||||| ||||||    
T  50001345 acatatgttgagtttcctatcaaattttggattt 50001312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 29763621 - 29763848
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  29763621 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatg 29763720  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| || |||||||||||||| |     
T  29763721 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatacaatgaattaacataagaattgaagtttagactgtagaataaacataa 29763820  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  29763821 gttgagtttcctatcaaatttgggattt 29763848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 51336548 - 51336494
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51336548 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 51336494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 13302955 - 13302879
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  13302955 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 13302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 12327726 - 12327780
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12327726 ccgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 12327780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 34392704 - 34392601
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggct-gtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  | |||||||||||| |||||||||||||| |  ||||||||    
T  34392704 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagaattgtagaataaacataggttgagtttccttttgaatttggg 34392605  T
Q  298 attt 301  Q
    ||||    
T  34392604 attt 34392601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 297255 - 297197
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  297255 taagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 297197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 8306542 - 8306440
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  ||||||||  ||| |||||  ||||||  ||| |||||| || ||||| |||||||||||||||||||||    
T  8306542 aattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttggga 8306443  T
Q  299 ttt 301  Q
    |||    
T  8306442 ttt 8306440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 24723350 - 24723415
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||| |||||||||||||||    
T  24723350 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctg-aaactgaatttaaca 24723415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 4595852 - 4595928
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| |||||||||||||||||||||||   | ||||||||||||  |||||||||| | |||||||    
T  4595852 ctaaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggt 4595928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 19676763 - 19676711
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19676711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 21046049 - 21046101
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 21046101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 21188149 - 21188249
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||| |||||||||||| |||||||| |||| |||||| ||||||| ||||||||||  | | ||   ||||||||||||||||||||||    
T  21188149 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatt 21188248  T
Q  301 t 301  Q
    |    
T  21188249 t 21188249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 7051921 - 7051959
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7051921 ctaaggtaagggtgggactaactttctctaattctaagt 7051959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 17901916 - 17902018
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||| ||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| |||||| |||||||||||||||    
T  17901916 aattgattgttgaaagagtagataatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttggga 17902015  T
Q  299 ttt 301  Q
    |||    
T  17902016 ttt 17902018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 22130178 - 22130240
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||| ||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  22130178 taagaattgatgttaaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 22130240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 42697837 - 42697739
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaa 182  Q
    |||||||||||||| ||||||| |||| |||||||||||  | ||||||||| || || |||||||||| ||||||| ||  |||||| |||| |||||    
T  42697837 ctaaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaa 42697739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 44822246 - 44822312
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  44822246 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 44822312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 45574172 - 45574230
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  45574172 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 45574230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 16058313 - 16058366
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  16058313 ctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaa 16058366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 42913102 - 42913049
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  42913102 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 42913049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 7052129 - 7052229
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| |||| ||||| || ||||| |||||||||||| ||||||||||    
T  7052129 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatt 7052228  T
Q  301 t 301  Q
    |    
T  7052229 t 7052229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 24723604 - 24723676
Alignment:
Q  229 tgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||||  ||| |||||  ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  24723604 tgaattaaggtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 24723676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 21708201 - 21708127
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||| |||  ||||||| ||| || |||||||||||| || |||||||||| |||||||    
T  21708201 taaggtaagggtgggactaaccttcaataattctgagt-atgtaattctgaaaattggatttaacatgttgtaggt 21708127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 21712744 - 21712670
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||| |||  ||||||| ||| || |||||||||||| || |||||||||| |||||||    
T  21712744 taaggtaagggtgggactaaccttcaataattctgagt-atgtaattctgaaaattggatttaacatgttgtaggt 21712670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 23194667 - 23194722
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||    
T  23194667 agaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 23194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 21239048 - 21239086
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  21239048 ctaaggtatgggtgggactaactttctctaattctaagt 21239086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 21239157 - 21239259
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||  ||||||  |||||||||| || |||| |||||| ||||||||||| |||    
T  21239157 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcagtttgtagaataatcataggtagagttttctatcaaatttagga 21239256  T
Q  299 ttt 301  Q
    |||    
T  21239257 ttt 21239259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 20633631 - 20633683
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||| |||||||||||||||||| ||||||||||||||  | |||||||||||    
T  20633631 taagataagggtgggactaacttgctctaattctaagttgtataattctgaaa 20633683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 22350769 - 22350694
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||||| ||| || | |||||||||| ||||||||||| | |||||||    
T  22350769 ctaaggtaagggtgggactaaccttcaataattctgagt-atatgattctgaaaattgaatttaacaagttgtaggt 22350694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 28313248 - 28313192
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttg 295  Q
    |||||||||| ||||||| ||| |||||| || ||||| ||||||||||||||||||    
T  28313248 taagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttg 28313192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 45755573 - 45755497
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| ||||||| |||| ||||| ||||| || | |||||||||| || |||||||| | |||||||    
T  45755573 ctaaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggt 45755497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 6834053 - 6834002
Alignment:
Q  250 gttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| |||||||||| || |||| |||||| ||||||||||||||||||    
T  6834053 gttcaggttgtagaataatcataggtagagttttctatcaaatttgggattt 6834002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 7320593 - 7320658
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    |||||||||||||||||||||| | | ||||||||||||  | | |||||||||| |||||||||||    
T  7320593 ctaaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaaca 7320658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 22145666 - 22145696
Alignment:
Q  85 taaggtaagggtgggactaactttctctaat 115  Q
    |||||||||||||||||||||||||||||||    
T  22145666 taaggtaagggtgggactaactttctctaat 22145696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 112
Target Start/End: Original strand, 24007214 - 24007252
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctct 112  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  24007214 atcatctatactaaggtaagggtgggactagctttctct 24007252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 51324557 - 51324519
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  51324557 ctaaggtaagggtgagactaactttccctaattctaagt 51324519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 21995647 - 21995684
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  21995647 ccgccgatcatcaatactaagataagggtgggactaac 21995684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Complemental strand, 24727420 - 24727383
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaag 121  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  24727420 ctaaggtaagggtgggactaaccttctttaattctaag 24727383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 41373423 - 41373348
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  41373423 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 41373348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 48444444 - 48444369
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  48444444 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 48444369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 196; Significance: 1e-107; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 29205 - 29432
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  29205 atcatcaatactaaggtaagagtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtagatggtaattttgatg 29304  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  29305 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 29404  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  29405 gttgagtttcctatcaaatttgggattt 29432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 121005 - 120931
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  121005 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 120931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 74 - 297
Target Start/End: Original strand, 29052171 - 29052394
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  29052171 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatg 29052270  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| ||    
T  29052271 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaattaattaacataagaattgaagttcaggctgtagaataaacatag 29052370  T
Q  274 gttgagtttcctatcaaatttggg 297  Q
    ||||||||||||||||||||||||    
T  29052371 gttgagtttcctatcaaatttggg 29052394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 84 - 301
Target Start/End: Original strand, 32160199 - 32160416
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaa 183  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  32160199 ctaaggtaagggtaagactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtgataattttgatgattagagaaa 32160298  T
Q  184 ttaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttc 283  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32160299 ttaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttc 32160398  T
Q  284 ctatcaaatttgggattt 301  Q
    |||||||||||| |||||    
T  32160399 ctatcaaatttgagattt 32160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 16549994 - 16550218
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||     
T  16549994 atcatcaatactaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgat- 16550092  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  16550093 --tagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 16550190  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||| ||||||||||||||||||    
T  16550191 gttgagttttctatcaaatttgggattt 16550218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 16615668 - 16615444
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||     
T  16615668 atcatcaatactaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgat- 16615570  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  16615569 --tagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 16615472  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||| ||||||||||||||||||    
T  16615471 gttgagttttctatcaaatttgggattt 16615444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 1856553 - 1856615
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1856553 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 1856615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 13917725 - 13917785
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggat 299  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13917725 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggat 13917785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 298
Target Start/End: Complemental strand, 14274159 - 14274062
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| |||||||||| || ||||| ||||||||| |||||||||||    
T  14274159 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 14274062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 35771440 - 35771516
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||||||| | |||||||    
T  35771440 ctaaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggt 35771516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 25926452 - 25926514
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||    
T  25926452 taagaattgaagttcaggctgtagaataaacataggttcagtttcctataaaatttgggattt 25926514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 4071873 - 4071797
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| |||||||| || |||||||| | |||||||    
T  4071873 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggt 4071797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 14218894 - 14218970
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  14218894 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 14218970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 15289158 - 15289052
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaa 183  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||| |||||||| || |||||||| | ||||||| ||  |||||| |||| ||| ||    
T  15289158 ctaaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgag-aa 15289060  T
Q  184 ttaggttt 191  Q
    ||||||||    
T  15289059 ttaggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 48807324 - 48807390
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||  ||||||||||    
T  48807324 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaaca 48807390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 12127162 - 12127237
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  12127162 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 12127237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 12754781 - 12754881
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  12754781 ttgattgttgaaagagtaggtaatctgatgaattaaagtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 12754880  T
Q  301 t 301  Q
    |    
T  12754881 t 12754881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 13147472 - 13147524
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  13147472 taaggtaagggtgggactaactttctctaattctaagttatataattctgaaa 13147524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 4325995 - 4325933
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  4325995 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 4325933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 12754611 - 12754676
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||| |||||| ||||||||    
T  12754611 ctaaggtaagggtgggactaactttctctaattctaagttatatgattctg-aaactggatttaaca 12754676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 13315195 - 13315297
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||| ||| ||||||||   || |||||  ||||||| |||||||||| || |||| |||||| |||||||||||||||    
T  13315195 aattgattgttgaaagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttggga 13315294  T
Q  299 ttt 301  Q
    |||    
T  13315295 ttt 13315297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 16078382 - 16078317
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||| ||||||  ||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaaca 16078317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 20586405 - 20586352
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  20586405 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 20586352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 8851159 - 8851211
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  8851159 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 8851211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 12372326 - 12372274
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12372274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 12465260 - 12465312
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12465312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 14928290 - 14928362
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 158  Q
    |||||||||||||||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||    
T  14928290 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 14928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 15351756 - 15351828
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 158  Q
    |||||||||||||||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||    
T  15351756 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 15351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 4690662 - 4690716
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaa 4690716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 14105580 - 14105638
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  14105580 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 14105638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 14415597 - 14415655
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  14415597 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 14415655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 16108011 - 16108069
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  16108011 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 16108069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 23664275 - 23664333
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  23664275 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 23664333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 44190369 - 44190431
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||| ||||||||    
T  44190369 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggattt 44190431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 11304087 - 11304030
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||    
T  11304087 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttgg 11304030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 11067520 - 11067468
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  11067520 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 11067468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 12322930 - 12322982
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||| |||||||||||||||||||||||  | |||||||||||    
T  12322930 taaggtaagggtggaactaactttctctaattctaagttgtataattctgaaa 12322982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 14259445 - 14259373
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 158  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||    
T  14259445 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtag 14259373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 15095636 - 15095711
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | |||||||    
T  15095636 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggt 15095711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 20620338 - 20620286
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  20620338 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaa 20620286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 30820134 - 30820224
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||| ||||||||||||||||| |||||||||||||| |||  ||||||| ||| || |||||||| |||||| |||||||| | |||||||    
T  30820134 ccgccgatcatcaatactaaggtgagggtgggactaaccttcagtaattctgagt-atgtaattctg-aaactggatttaacaggttgtaggt 30820224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 32433589 - 32433641
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  32433589 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 32433641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 11054767 - 11054681
Alignment:
Q  83 actaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttg 170  Q
    ||||||||||||||||||||||| |||  | |||||||||  ||| |||||||||| ||||||||||| | ||||||| || ||||||    
T  11054767 actaaggtaagggtgggactaaccttcaatgattctaagt-gtttgattctgaaaattgaatttaacaggttgtaggttgtaattttg 11054681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 36300766 - 36300841
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcag-gctgtagaataaacagaggttgagtttcct 285  Q
    ||||||||||||||||| ||||||||| |||| | ||| ||||||   ||||||||||||| ||||||||||||||    
T  36300766 aaagagtaggtaatccattgaattaacgtaaggagtgaggttcagaattgtagaataaacataggttgagtttcct 36300841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 13648181 - 13648119
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||| ||| |||||||||| || ||||| | ||||||||||||||||||||||    
T  13648181 taagaattgatgtttaggttgtagaataatcataggttaaatttcctatcaaatttgggattt 13648119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 14188446 - 14188504
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||| | |||||||||| || ||||| ||||||||||||||||||||    
T  14188446 taagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 14188504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 16462968 - 16462910
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || || || ||||||||||||||||||||    
T  16462968 taagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttggg 16462910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 18955383 - 18955329
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    ||||||||| |||| ||||||||||||||||||||||||  | ||||||||||||    
T  18955383 ctaaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaaa 18955329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 19282984 - 19282882
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||   |||||| |||||||||| || |||| |||||| ||||||||||||| |    
T  19282984 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtcttcaggttgtagaataatcataggtagagttttctatcaaatttggaa 19282885  T
Q  299 ttt 301  Q
    |||    
T  19282884 ttt 19282882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 38295540 - 38295438
Alignment:
Q  200 aattgattgtta-aagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||||  |||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| |||||||||||  |||||||||    
T  38295540 aattgattgttgcaagagtaggtaatccgatgaagtaaggtaataattggtgttcaggatgtagaataatcataggtagagtttcctattgaatttggga 38295441  T
Q  299 ttt 301  Q
    |||    
T  38295440 ttt 38295438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 42565948 - 42566042
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttg 295  Q
    ||||||||| |||| ||| |||||||| ||||||||||||  |||||| ||||||| ||||||||||  | ||||   |||||||||||||||||    
T  42565948 ttgattgttgaaagtgtacgtaatccaatgaattaacatagaaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttg 42566042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 47974819 - 47974857
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  47974819 ctaaggtaagggtgagactaactttctctaattctaagt 47974857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 14180397 - 14180450
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  14180397 ctaaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaa 14180450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 17505117 - 17505174
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||||| |||||||  ||||||||| || ||||| |||||||||||||||||||    
T  17505117 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 17505174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 17548097 - 17548040
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||||| |||||||  ||||||||| || ||||| |||||||||||||||||||    
T  17548097 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 17548040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 19485956 - 19485993
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  19485956 ccgccgatcatcaatactaaggtaagggtgggactaac 19485993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 20214200 - 20214147
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||| |||||| |||  | |||||||||||    
T  20214200 ctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaa 20214147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 24269946 - 24269999
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||| ||||||||||||||| |||||  | |||||||||||    
T  24269946 ctaaggtaagggtgggattaactttctctaattttaagttgtataattctgaaa 24269999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 33002205 - 33002168
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||| |||||||||||||||||||||||||    
T  33002205 taaggtaagggtcggactaactttctctaattctaagt 33002168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 44374896 - 44374843
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||| || |||||||||||||||||||||  | |||||||||||    
T  44374896 ctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaa 44374843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 44383761 - 44383708
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||| || |||||||||||||||||||||  | |||||||||||    
T  44383761 ctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaa 44383708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 46386087 - 46386140
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||| ||||||| |||||||||||||||||||||||||  | |||||||||||    
T  46386087 ctaagataagggtaggactaactttctctaattctaagttgtataattctgaaa 46386140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 10277375 - 10277327
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 10277327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 13698637 - 13698705
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||||||| ||||||||||||| ||||| |||||   ||||||||||||| || |||| |||||    
T  13698637 ctaaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatg 13698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 301
Target Start/End: Complemental strand, 18570584 - 18570481
Alignment:
Q  199 gaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggct-gtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||||||| ||||||||||||| ||| ||||||||| |||| | ||| ||||||  | |||||||||||| ||||||| |||||| |  |||||||    
T  18570584 gaattgattgttgaaagagtaggtaa-ccattgaattaacgtaaggaatgaggttcagaattgtagaataaacataggttgaatttcctcttgaatttgg 18570486  T
Q  297 gattt 301  Q
    |||||    
T  18570485 gattt 18570481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 47975007 - 47975107
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| ||||| ||||||||||  ||||||||  ||| |||||  ||||||| |||||||||| || || || ||||| ||||||||||||| |||    
T  47975007 ttgattgttgaaagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatt 47975106  T
Q  301 t 301  Q
    |    
T  47975107 t 47975107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Original strand, 8488093 - 8488124
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  8488093 ctaaggtaagggtgggactaactttctctaat 8488124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Original strand, 8513752 - 8513783
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  8513752 ctaaggtaagggtgggactaactttctctaat 8513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Original strand, 16250221 - 16250252
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  16250221 ctaaggtaagggtgggactaactttctctaat 16250252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 19195071 - 19195028
Alignment:
Q  258 tgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| || ||||| ||||||||||||||||||||||||    
T  19195071 tgtagaataatcataggttaagtttcctatcaaatttgggattt 19195028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 29797431 - 29797392
Alignment:
Q  258 tgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  29797431 tgtagaataaacatatgttgagtttcctatcaaatttggg 29797392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 29801250 - 29801211
Alignment:
Q  258 tgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  29801250 tgtagaataaacatatgttgagtttcctatcaaatttggg 29801211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 32302278 - 32302203
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctg-aaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||| |||| || |||||||||| |||||||    
T  32302278 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaattgtatttaacatgttgtaggt 32302203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 10658850 - 10658888
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  10658850 ctaaggtaagggtgggactaaccttctttaattctaagt 10658888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 11662005 - 11661947
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||| |||  | ||||| ||||||||||||||||||||    
T  11662005 taagaattgatgttcaggttgtagactaattataggttaagtttcctatcaaatttggg 11661947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 13256592 - 13256530
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||| | ||||| |||| || ||| | ||||||||||||||||||||||||    
T  13256592 taagaattgatgttcaagttgtaggataatcataggataagtttcctatcaaatttgggattt 13256530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 119
Target Start/End: Complemental strand, 16999488 - 16999454
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattcta 119  Q
    ||||||||||||| |||||||||||||||||||||    
T  16999488 taaggtaagggtgagactaactttctctaattcta 16999454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 18990900 - 18990846
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    ||||||||| ||||  |||||||||||||||||||||||  | ||||||||||||    
T  18990900 ctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaaa 18990846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 25942366 - 25942312
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||| ||||||| |||||||||| |  ||||| ||||||||||||||||||||    
T  25942366 aattgatgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg 25942312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 36685135 - 36685219
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||||||| || ||| |||  ||||||| ||| || |||||||| |||||| |||||||| | |||||||    
T  36685135 atcatcaatactaaggtaagggtggaaccaaccttcaataattctgagt-atgtaattctg-aaactggatttaacaggttgtaggt 36685219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 39431340 - 39431402
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || | |||  |||||||||||||| ||||||||    
T  39431340 taagaattgatgttcaggttgtagaataatcatatgttatgtttcctatcaaatatgggattt 39431402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 43276744 - 43276774
Alignment:
Q  85 taaggtaagggtgggactaactttctctaat 115  Q
    |||||||||||||||||||||||||||||||    
T  43276744 taaggtaagggtgggactaactttctctaat 43276774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 18074647 - 18074684
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  18074647 taaggtaagagtgggattaactttctctaattctaagt 18074684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 36704570 - 36704623
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||| |||| ||||| |||||  | |||||||||||    
T  36704570 ctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaa 36704623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 8930881 - 8930965
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttc 283  Q
    ||||||||||| ||||||||||||| ||| |||||||||  ||| | |||  |||||  |||| |||||||| ||||||||||||    
T  8930881 aattgattgttgaaagagtaggtaaaccattgaattaacgaaaggaatgagcttcagattgtataataaacataggttgagtttc 8930965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 15140266 - 15140191
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||| ||||| ||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | |||||||    
T  15140266 ctaaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggt 15140191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 46579742 - 46579774
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtggga 100  Q
    ||||| |||||||||||||||||||||||||||    
T  46579742 ccgccgatcatcaatactaaggtaagggtggga 46579774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 16979975 - 16979748
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  16979975 atcatcaatactaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatg 16979876  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  16979875 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 16979776  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||| ||||    
T  16979775 gttgagtttcctatcaaatttggaattt 16979748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 85 - 301
Target Start/End: Complemental strand, 22652825 - 22652609
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaat 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |  ||||||||||||||||||||    
T  22652825 taaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaaactagatttaacatgatgtaggtcgcaattttgatgattagagaaat 22652726  T
Q  185 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 284  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22652725 taggttttggtttggaattgattgttaaagagtaggtaatctagtgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 22652626  T
Q  285 tatcaaatttgggattt 301  Q
    |||||||||||||||||    
T  22652625 tatcaaatttgggattt 22652609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 45803451 - 45803552
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||    
T  45803451 aattgattgttgaaagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataaacataggttgagtttcctattgaatttggga 45803550  T
Q  299 tt 300  Q
    ||    
T  45803551 tt 45803552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 5224222 - 5224160
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5224222 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 5224160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 13522463 - 13522561
Alignment:
Q  200 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  13522463 aattgatcgttaaagagtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 13522561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 26054587 - 26054649
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26054587 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 26054649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 48043557 - 48043694
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| | |||| |||| || |||||||   ||  | |||| ||||| | ||||||    
T  48043557 attttgatgattagagaaattagattttgatttggaattgattgttaaaaaggtagataattcaatgaattagtgtacaatttgatgttcaagttgtaga 48043656  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  48043657 ataaacataggttgagtttcctattgaatttgggattt 48043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 36528936 - 36528869
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctga 135  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  36528936 ccgccgatcatcaatactaaggtaagggtgggattaactttctctaattctaagtaatataattctga 36528869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 15465994 - 15465932
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  15465994 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatatgggattt 15465932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 301
Target Start/End: Complemental strand, 25202107 - 25201972
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||| || |||||||   ||  | |||| |||||   | ||||    
T  25202107 attttgatgattagagaaattaggttttgatttggaattgattgttaaaaaggtagataattcaatgaattagtgtacaatttgatgttca--ttctaga 25202010  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  25202009 ataaacataggttgagtttcctattgaatttgggattt 25201972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 33565140 - 33565064
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  33565140 ctaaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 33565064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 48631270 - 48631170
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  48631270 aattgattgttgaaagtgtaggtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggga 48631171  T
Q  299 t 299  Q
    |    
T  48631170 t 48631170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 15446852 - 15446905
Alignment:
Q  69 cgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15446852 cgccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15446905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 11885560 - 11885632
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggt 11885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 13185948 - 13185872
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||  |||||||||| | |||||||    
T  13185948 ctaaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggt 13185872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 35960927 - 35961003
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||| |||||||||||||||||| ||  | |||||||||||| ||||||||||| | |||||||    
T  35960927 ctaaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggt 35961003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 3263946 - 3264009
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaatt 131  Q
    ||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||| |||||    
T  3263946 ccgccgatcatcaatactaaggtaagggtcggattaaccttctctaattctaagtaatataatt 3264009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 3527270 - 3527372
Alignment:
Q  201 attgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggct-gtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||||||||| ||| ||||||||| |||| | ||| ||||||  | |||||||||||| ||||||||||||||||  |||||||||    
T  3527270 attgattgttgaaagagtaggtaagccattgaattaacgtaaggaatgaggttcagaattgtagaataaacataggttgagtttcctattgaatttggga 3527369  T
Q  299 ttt 301  Q
    |||    
T  3527370 ttt 3527372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 13437138 - 13437080
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  13437138 taagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 13437080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 43549808 - 43549870
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  43549808 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 43549870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 24177719 - 24177788
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||||| |||||  | |||||||||||    
T  24177719 ccgccgattatcaatactaaggtaagggtgggacaaactttctctaattataagttgtataattctgaaa 24177788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 40808049 - 40807996
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  40808049 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40807996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 44274471 - 44274418
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  44274471 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 44274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 11563778 - 11563702
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| ||||||||||||||||  | ||||||||||||   ||||||||| | |||||||    
T  11563778 ctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggt 11563702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 17045018 - 17044966
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 17047178 - 17047126
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 17541486 - 17541434
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 22306583 - 22306635
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 22306635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 42427 - 42369
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  42427 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 42369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 3803713 - 3803655
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  3803713 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 3803655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 5200242 - 5200280
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5200242 ctaaggtaagggtgggactaactttctctaattctaagt 5200280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 12305962 - 12305904
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  12305962 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 12305904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 15566797 - 15566743
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  15566797 ctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 15566743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 16050980 - 16050942
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagt 16050942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 18699431 - 18699505
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  18699431 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 18699505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 19568207 - 19568245
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19568207 ctaaggtaagggtgggactaactttctctaattctaagt 19568245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 22758835 - 22758909
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||| ||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  22758835 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 22758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 29544186 - 29544244
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  29544186 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 29544244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 40812886 - 40812848
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40812886 ctaaggtaagggtgggactaactttctctaattctaagt 40812848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 46722739 - 46722797
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  46722739 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 46722797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 55291754 - 55291812
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  55291754 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 55291812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 11259483 - 11259411
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 158  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| |||||||| |||| |||||    
T  11259483 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgaatttagcatgttgtag 11259411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 17518872 - 17518925
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||| ||||||||||||||||||||||||||||||||  | |||||||||||    
T  17518872 ctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaa 17518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 17533734 - 17533787
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||| ||||||||||||||||||||||||||||||||  | |||||||||||    
T  17533734 ctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaa 17533787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 49900783 - 49900730
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  49900783 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 49900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 42323970 - 42324046
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| || | ||||| |||||  | |||||||||||| ||||||| ||||| |||||||    
T  42323970 ctaaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggt 42324046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 6820069 - 6820010
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||| |||||||||||    
T  6820069 taagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 6820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 10555206 - 10555148
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  10555206 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 10555148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 18890323 - 18890265
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| ||| |||||| || ||||| ||||||||||||||||||||    
T  18890323 taagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggg 18890265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 54521662 - 54521604
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||| | ||||||||||||||||||||||||||    
T  54521662 taagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggg 54521604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 14508896 - 14508847
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  14508896 ggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 14508847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 37641487 - 37641524
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  37641487 ccgccgatcatcaatactaaggtaagggtgggactaac 37641524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 297
Target Start/End: Original strand, 6805043 - 6805139
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| |||||||||| || | ||| ||||| ||||||||||||||    
T  6805043 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttggg 6805139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 10311575 - 10311527
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 10311527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 17539158 - 17539106
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| |||||||||| |||||||||||||  | |||||||||||    
T  17539158 taaggtaagggtgagactaactttatctaattctaagttgtataattctgaaa 17539106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 17694115 - 17694045
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||| ||||||||||||||||||||||||  | ||||||| |||| ||| |||| |||| |||||||    
T  17694115 gtaagggtgagactaactttctctaattctaagttgtataattct-aaaattgagtttagcatgttgtaggt 17694045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 21845732 - 21845778
Alignment:
Q  166 ttttgatgattagagaaattaggttttggtttggaattgattgttaaa 213  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  21845732 ttttgatg-ttatagaaattaggttttgatttggaattgattgttaaa 21845778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 3160742 - 3160808
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||||||||||||| || |||||||| |||| |||||| ||| ||| ||||||||||    
T  3160742 ttgattgttgaaagagtaggtaattcaatgaattaatataaaaattgatgtttaggttgtagaataa 3160808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 9510915 - 9510953
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  9510915 ctaaggtaagggtgaaactaactttctctaattctaagt 9510953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 9518890 - 9518928
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  9518890 ctaaggtaagggtgaaactaactttctctaattctaagt 9518928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 10563761 - 10563723
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  10563761 ctaaggtaatggtgggactaactttctctaattttaagt 10563723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 14967253 - 14967203
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattct 118  Q
    ||||| |||||||||||||||||||||| ||||||||| |||  |||||||    
T  14967253 ccgccgatcatcaatactaaggtaagggggggactaaccttcaataattct 14967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 16324693 - 16324751
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| ||||||||||  | || || ||||||||||||||||||||    
T  16324693 taagaattgatgttcaggttgtagaataattatagcttaagtttcctatcaaatttggg 16324751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 43888756 - 43888830
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||| |  ||  |||||||||||  ||||||||||||||  | |||||||||| |||||||    
T  43888756 aaggtaagggtgggactagccatcaataattctaagtgttttaattctgaaaatggtatttaacatgttgtaggt 43888830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 43929290 - 43929228
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||| |||| ||| ||| |||||||||| |  ||||| ||||||||||||||||||||||||    
T  43929290 taagacttgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggattt 43929228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 52988847 - 52988923
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||||||||||||||| ||||||| |||  ||||||| ||| || | |||||||| | |||||||||||||    
T  52988847 atcatcaatactaaggtaagggtgagactaaccttcaataattctgagt-atgtgattctgaaga-tgaatttaacatg 52988923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 12509349 - 12509402
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||| ||| |||| |||||||||||  | |||||||||||    
T  12509349 ctaaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaa 12509402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 15931508 - 15931545
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  15931508 taaggtaaaggtgagactaactttctctaattctaagt 15931545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 41172371 - 41172408
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||| || |||||    
T  41172371 taaggtaagggtgggactaactttctctacttataagt 41172408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 49968859 - 49968923
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    ||||||||| ||||||||||| ||| ||||||||||||  | | |||||||||| |||||||||||    
T  49968859 taaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaaca 49968923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 52465354 - 52465391
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  52465354 ccgccgatcatcaatactaaggtaagggtgtgactaac 52465391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 12155141 - 12155209
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||| |||| |||||||| ||| ||||||||||| | |||||| ||| ||| ||||||||||    
T  12155141 aattgattgttgaaagtgtaggtaacccaatgaattaacatgaaaattgatgttgaggttgtagaataa 12155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 35354654 - 35354602
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||| |||| |||||||||||||||||||||| |||||  | |||||||||||    
T  35354654 taagctaagtgtgggactaactttctctaattttaagttgtataattctgaaa 35354602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 68 - 301
Target Start/End: Original strand, 21080952 - 21081185
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||    
T  21080952 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaagtggtaatt 21081051  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  21081052 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaaaacaatgaattaacataagaattgaagttcaggctgtagaataa 21081151  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| | ||||||||||||||||||||| ||||||    
T  21081152 acataagttgagtttcctatcaaatttaggattt 21081185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 25184258 - 25184025
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||| |||||||||| |||    
T  25184258 ccgccaatcatcaatactaaggtaagggtgagactaactttctctaattctaagtattttaattctgaaaactagatttaacatgttgtaggtggtaatt 25184159  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  25184158 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcagactgtagaataa 25184059  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  25184058 acataggttgagtttcctatcaaatttgggattt 25184025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 21915693 - 21915460
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||    
T  21915693 ccgccgatcatcaatactaaagtaagggtgtgactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 21915594  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  21915593 ttgatgaatagagaaattaggttttggtttggaattgattgttaaagaataggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 21915494  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| |||||||||||||||| |||||||||||||    
T  21915493 acataggttgagtttcctataaaatttgggattt 21915460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 93 - 301
Target Start/End: Original strand, 18357975 - 18358183
Alignment:
Q  93 gggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaattaggtttt 192  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18357975 gggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatgattagagaaattaggtttt 18358074  T
Q  193 ggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaat 292  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18358075 ggtttggaattgattgttaaagagtatgtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 18358174  T
Q  293 ttgggattt 301  Q
    |||||||||    
T  18358175 ttgggattt 18358183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 12626546 - 12626647
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||||||||| ||||||||| ||||||| ||||||||||||| | ||||||||||||||  |||||||||    
T  12626546 aattgattgttgaaagagtaggtaatccgatgaattaacagaagaattgatgttcaggttgtagaataaacataagttgagtttcctattgaatttggga 12626645  T
Q  299 tt 300  Q
    ||    
T  12626646 tt 12626647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 14694379 - 14694303
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||||||    
T  14694379 ctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggt 14694303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 22502024 - 22501956
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||    
T  22502024 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatg 22501956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 22509958 - 22509890
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||    
T  22509958 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatg 22509890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 27852721 - 27852635
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttg 170  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| | ||||||| ||| |||||    
T  27852721 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgttgttttg 27852635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 25142257 - 25142181
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  25142257 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 25142181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 40912383 - 40912320
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  40912383 atcatcaatactaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40912320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 357950 - 357896
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  357950 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 357896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 19647172 - 19647070
Alignment:
Q  200 aattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| || | |||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  19647172 aattgattgttgaaaatgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggga 19647073  T
Q  299 ttt 301  Q
    |||    
T  19647072 ttt 19647070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 31346019 - 31345957
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  31346019 taagaattgaagttcaggctatagaataaacataggttgagtttcctatcaaatttggtattt 31345957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 297
Target Start/End: Original strand, 36734530 - 36734664
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgttaaa--gagtaggtaatccagtgaattaacataagaattgaagttcaggctgtag 262  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||   | ||| |||| || |||||||   ||  |||||  ||||||| |||||    
T  36734530 attttgatgattagagaaattagattttgatttggaattgattgttaaaataaatagataattcaatgaattagtgtacaaattggtgttcaggttgtag 36734629  T
Q  263 aataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||| |  ||||| ||||||||||||||||||||    
T  36734630 aataatcttaggttaagtttcctatcaaatttggg 36734664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 297
Target Start/End: Original strand, 1383768 - 1383864
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||| ||||||||||||||||  ||||||||| ||| |||||   |||||| |||||||||| || ||||| ||||||||||||||||||||    
T  1383768 ttgattgttgaaagagtaggtaatccgatgaattaacgtaataattggtcttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 1383864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 3539890 - 3539814
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||||||||||||||| |||||  | ||||||||||||  |||||||||| | |||||||    
T  3539890 ctaaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggt 3539814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 24516239 - 24516164
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  24516239 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 24516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 45535862 - 45535762
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||  | ||||   ||||||| ||||||||||||||    
T  45535862 ttgattgttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggatt 45535763  T
Q  301 t 301  Q
    |    
T  45535762 t 45535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 149620 - 149722
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  ||||||||  ||| |||||  ||||||  ||| |||||| || ||||| |||||||||||||||||||||    
T  149620 aattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttggga 149719  T
Q  299 ttt 301  Q
    |||    
T  149720 ttt 149722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 23338552 - 23338610
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  23338552 taagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 23338610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 17307539 - 17307486
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17307539 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 5031129 - 5031181
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 5031181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 24780840 - 24780892
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 2523747 - 2523821
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||  ||| ||| ||||||||| |||||||    
T  2523747 taaggtaagggtgggactaactttctctaattctaagttgtataattct-taaattgagtttaacatgttgtaggt 2523821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 25046171 - 25046096
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 159  Q
    |||||||||||||||||||||| |||| |||||||||||  | ||||||||| || || |||||||||| ||||||    
T  25046171 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtagg 25046096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 41301082 - 41301144
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||| |||||||||    
T  41301082 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggattt 41301144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 5986230 - 5986154
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||| ||| |||| |||||||||||  | |||||||||||| || |||||||| | |||||||    
T  5986230 ctaaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggt 5986154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 9975981 - 9975929
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  9975981 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaa 9975929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 45535722 - 45535666
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  45535722 aaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataa 45535666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 10684085 - 10684143
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  10684085 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 10684143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 13100887 - 13100945
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || |||||| ||||||||||| || ||||| ||||||||||||||||||||    
T  13100887 taagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggg 13100945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 18390229 - 18390279
Alignment:
Q  100 actaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    ||||||||||||||||||||||| || ||||||||||||  ||||||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaaca 18390279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 20262059 - 20262001
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  20262059 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 20262001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 21072841 - 21072899
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| ||| |||||| || ||||| ||||||||||||||||||||    
T  21072841 taagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggg 21072899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 23068408 - 23068482
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||| ||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  23068408 aaggtaagggtgagactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 23068482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 24884297 - 24884231
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| | ||||||||    
T  24884297 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttatagaataa 24884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 28652677 - 28652763
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||||||||||| ||||||||  ||| |||||| |||||||  ||||||||| || |||  |||||| |||| |||||||||    
T  28652677 aaagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataatcataggaagagttttctataaaatttggg 28652763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 43707200 - 43707258
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||| | |||||||||| || ||||| ||||||||||||||||||||    
T  43707200 taagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 43707258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 19201199 - 19201252
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||| |||||||| ||||||||||||||||||||||||  | |||||||||||    
T  19201199 ctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaa 19201252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 34858175 - 34858212
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34858175 ccgccgatcatcaatactaaggtaagggtgggactaac 34858212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 34873237 - 34873274
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34873237 ccgccgatcatcaatactaaggtaagggtgggactaac 34873274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 24436700 - 24436648
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||| |||||||||||||||||||||| ||||||||||  | |||||||||||    
T  24436700 taagataagggtgggactaactttctcgaattctaagttgtataattctgaaa 24436648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 27484478 - 27484514
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttct 110  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27484478 atcatcaatactaaggtaagggtgagactaactttct 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 37270747 - 37270699
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 37270699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 1383545 - 1383580
Alignment:
Q  87 aggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagt 1383580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 28345209 - 28345252
Alignment:
Q  258 tgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| || ||||| ||||||||||||||||||||||||    
T  28345209 tgtagaataatcataggttaagtttcctatcaaatttgggattt 28345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 34491223 - 34491258
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggacta 103  Q
    ||||| ||||||||||||||||||||||||||||||    
T  34491223 ccgccgatcatcaatactaaggtaagggtgggacta 34491258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 39683264 - 39683190
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||| |||  ||||  ||||| ||| | ||||||||| ||||||||||||| |||||||    
T  39683264 taaggtaagggtgggactaacattcaataatcttaagtcattga-ttctgaaaattgaatttaacatgttgtaggt 39683190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 20590435 - 20590493
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||| ||||||||||||||    
T  20590435 taagaattgatgttcaggtggtagaataatcataggttaagttttctatcaaatttggg 20590493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 44072610 - 44072572
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  44072610 ctaaggtaagggtgagactaactttcactaattctaagt 44072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 22251448 - 22251500
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||  ||||| |||||||||||||||||  | |||||||||||    
T  22251448 taaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaa 22251500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 22501786 - 22501730
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||| |||||||||||| |||||||||||| ||||||| ||||| | ||| ||||||    
T  22501786 aaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataa 22501730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 22509720 - 22509664
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||| |||||||||||| |||||||||||| ||||||| ||||| | ||| ||||||    
T  22509720 aaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataa 22509664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 24792758 - 24792824
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||||||||||||| |||  ||||||| ||| || | |||||| |||||||||||||||||    
T  24792758 ctaaggtaagggtgggactaaccttcaataattctgagt-atgtgattctg-aaactgaatttaacatg 24792824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 34401735 - 34401810
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  34401735 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 34401810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 23479151 - 23478918
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||||||||| |||    
T  23479151 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtatttaaattatgaaaactggatttaacatgatgtaggtggtaatt 23479052  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  23479051 ttgatgattagagaaattaggttttggtttggaagtgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 23478952  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||| ||||||    
T  23478951 acataggttgagtttcctatcaaatttaggattt 23478918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 68 - 297
Target Start/End: Complemental strand, 19880891 - 19880663
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| |||    
T  19880891 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaag-attttaattctgaaaactaaatttaacatgatgtaggtggtaatt 19880793  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  19880792 ttgatgattagagaaattaggttttgttttggaattgattgttaaagagtaggtaattaaatgaattaacataagaattgaagttcaggctgtagaataa 19880693  T
Q  268 acagaggttgagtttcctatcaaatttggg 297  Q
    ||| ||||||||||||||||||||||||||    
T  19880692 acataggttgagtttcctatcaaatttggg 19880663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 16198899 - 16198672
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  16198899 atcatcaatactaaggtaaaagtgggactaactttctctaattctaagtattttcattctgaaaactggatttaacatgatgtaggtggtaattttgatg 16198800  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    || || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  16198799 ataagggaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 16198700  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  16198699 gttgagtttcctatcaaatttgggattt 16198672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 69 - 297
Target Start/End: Complemental strand, 26454776 - 26454546
Alignment:
Q  69 cgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattt 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  26454776 cgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattt 26454677  T
Q  169 tgatgattagagaaat--taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaata 266  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||    
T  26454676 tgattattagagaaatattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattaaagttcaggctgtagaata 26454577  T
Q  267 aacagaggttgagtttcctatcaaatttggg 297  Q
    |||| ||||||||||||||||||||||||||    
T  26454576 aacataggttgagtttcctatcaaatttggg 26454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 84 - 301
Target Start/End: Original strand, 25657513 - 25657730
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaa 183  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  25657513 ctaaagtaagggtgggagtaactttctctaattctaagtattttaattctgaaaattggatttaacatgatgtaggtggtaattttgatgattagagaaa 25657612  T
Q  184 ttaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttc 283  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  25657613 ttaggttttggtttgaaattgattgttaaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacataggttgagtttc 25657712  T
Q  284 ctatcaaatttgggattt 301  Q
    ||||||||||||||||||    
T  25657713 ctatcaaatttgggattt 25657730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 74 - 224
Target Start/End: Original strand, 17158952 - 17159102
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||||||| |||||||||    
T  17158952 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattttgaaaactagatttaacatgatgtaggtggtaattttgatg 17159051  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17159052 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaat 17159102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 297
Target Start/End: Complemental strand, 22483706 - 22483620
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||||||||   |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||  ||||||||    
T  22483706 aaagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttggg 22483620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 14397063 - 14397120
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14397063 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 14397120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 20022039 - 20022115
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||  |||||||||| | |||||||    
T  20022039 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggt 20022115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 20879411 - 20879311
Alignment:
Q  200 aattgattgttaaa-gagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||| ||||||||||||    
T  20879411 aattgattgttaaaagtgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttggga 20879312  T
Q  299 t 299  Q
    |    
T  20879311 t 20879311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 22610380 - 22610466
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcct 285  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  ||||||||||||| ||||||||||||||    
T  22610380 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagtttcct 22610466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 22254819 - 22254743
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  22254819 ctaaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggt 22254743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 36727037 - 36727113
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  36727037 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggt 36727113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 45469218 - 45469294
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||  |||||||||| | |||||||    
T  45469218 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggt 45469294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 23899986 - 23900061
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 159  Q
    |||||||||||||| |||||||||||||||||||||||| || ||| ||||| || ||||||||||| | ||||||    
T  23899986 ctaaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtagg 23900061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 4380616 - 4380670
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 4380670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 23884107 - 23884021
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcct 285  Q
    ||||||||||| |||||||||||||  || ||||||||| |||| | ||||||||||  ||||||||||||| ||||||||||||||    
T  23884107 aattgattgttgaaagagtaggtaaatcattgaattaacgtaaggaatgaagttcagattgtagaataaacataggttgagtttcct 23884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 36732598 - 36732700
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||| ||| ||||||||| |||| |  || ||||||  |||||||||| || ||||  |||||||||||||||||||||    
T  36732598 aattgattgttgaaagagtaggtaaaccattgaattaacgtaaggaaggaggttcagattgtagaataatcataggtcaagtttcctatcaaatttggga 36732697  T
Q  299 ttt 301  Q
    |||    
T  36732698 ttt 36732700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 12577942 - 12577901
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12577942 atcatcaatactaaggtaagggtgggactaactttctctaat 12577901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 17906848 - 17906923
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||| |||||| |||||||| | |||||||    
T  17906848 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctg-aaactggatttaacaagttgtaggt 17906923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 31722492 - 31722568
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||  |||||||||| | |||||||    
T  31722492 ctaagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggt 31722568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 5761586 - 5761548
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5761586 ctaaggtaagggtgggactaactttctctaattctaagt 5761548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 8413901 - 8413959
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  8413901 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 8413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 191
Target Start/End: Complemental strand, 17218754 - 17218649
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaat 184  Q
    |||| |||||||||||||||||||||||| ||||||||| | |||||||||||| |  ||||| ||   ||||||| ||| |||||| |||| ||| |||    
T  17218754 taagataagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgag-aat 17218656  T
Q  185 taggttt 191  Q
    |||||||    
T  17218655 taggttt 17218649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 22532131 - 22532169
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22532131 ctaaggtaagggtgggactaactttctctaattctaagt 22532169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 22536816 - 22536854
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22536816 ctaaggtaagggtgggactaactttctctaattctaagt 22536854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 6101752 - 6101805
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||||||||||    
T  6101752 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 6101805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 18761500 - 18761447
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    ||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  18761500 taaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaaa 18761447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 20397509 - 20397562
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||| |||||||||||||||||||||  | |||||||||||    
T  20397509 ctaaggtaagggtgggattaactttctctaattctaagttgtataattctgaaa 20397562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 298
Target Start/End: Original strand, 20517172 - 20517269
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  20517172 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 20517269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 20083638 - 20083690
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 20083690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 21676717 - 21676773
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  21676717 aaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 21676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 42817907 - 42817959
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||| |||||||||||||||||||  | |||||||||||    
T  42817907 taaggtaagggtgggacttactttctctaattctaagttgtataattctgaaa 42817959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 23419494 - 23419427
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacat 151  Q
    |||||||||||||||||||||| |||| |||||||||||  | ||||||||| || || |||||||||    
T  23419494 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacat 23419427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 25483594 - 25483653
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||| ||| |||||||||| || ||||| |||||||||||||||||||||    
T  25483594 taagaattgatgtttaggttgtagaataatcataggttaagtttcctatcaaatttggga 25483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 19882843 - 19882789
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  19882843 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 19882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 22317910 - 22317975
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    |||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| |||||||||||    
T  22317910 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaaca 22317975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 22345059 - 22344966
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaattt 294  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||    
T  22345059 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaattt 22344966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 22356719 - 22356626
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaattt 294  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||    
T  22356719 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaattt 22356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 39936007 - 39936044
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||| |||||||||||||||||||||    
T  39936007 taaggtaagggtgggattaactttctctaattctaagt 39936044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 19140816 - 19140765
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||| ||||||||||||||||||  | |||||||||||    
T  19140816 taaggtaagggtgggacta-ctttctctaattctaagttgtataattctgaaa 19140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 19700214 - 19700138
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||| |||||||||||  | ||||||| | ||  | |||||||||| |||||||    
T  19700214 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggt 19700138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 23948316 - 23948240
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||| |||||| |||| |||||||||||  | | |||||||||| || |||||||| | |||||||    
T  23948316 ctaaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggt 23948240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 37292753 - 37292705
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 37292705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 13660854 - 13660920
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||||||||||||||| |||  ||||||| ||| || | |||||||||| |||||||||||||    
T  13660854 taaggtaagggtgggactaaccttcaataattctgagt-atgtgattctgaaaattgaatttaacatg 13660920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 13719497 - 13719563
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||||||||||||||| |||  ||||||| ||| || | |||||||||| |||||||||||||    
T  13719497 taaggtaagggtgggactaaccttcaataattctgagt-atgtgattctgaaaattgaatttaacatg 13719563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Original strand, 22610266 - 22610297
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  22610266 ctaaggtaagggtgggactaactttctctaat 22610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 41680116 - 41680163
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaat 115  Q
    ||||| ||||||||||||||||||| |||||||||||| |||| ||||    
T  41680116 ccgccgatcatcaatactaaggtaaaggtgggactaaccttctttaat 41680163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 34758915 - 34758885
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  34758915 gtaagggtgggactaactttctctaattcta 34758885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 6573060 - 6573093
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||||||||||||||||||||||||    
T  6573060 gtaagggtgagactaactttctctaattctaagt 6573093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 6202824 - 6202776
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaa 6202776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 22237033 - 22237065
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtggga 100  Q
    ||||| |||||||||||||||||||||||||||    
T  22237033 ccgccgatcatcaatactaaggtaagggtggga 22237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 22583659 - 22583726
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||||||||||| |||| |||| |||||||| ||  | |||||||| ||| |||||||||||||    
T  22583659 ctaaggtaagggtgggattaacattctttaattctaggttgtataattctg-aaattgaatttaacatg 22583726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 23889852 - 23889785
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||| |||||||| || |||||||||||||||||| ||  | |||||||| ||| |||||||||||||    
T  23889852 ctaagctaagggtgagattaactttctctaattctaggttgtataattctg-aaattgaatttaacatg 23889785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 68 - 301
Target Start/End: Original strand, 15900637 - 15900870
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| ||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||    
T  15900637 ccgccgatcttcaatactaaggtaagggtgagaccaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 15900736  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  15900737 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataa 15900836  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  15900837 acataggttgagtttcctatcaaatttgggattt 15900870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 68 - 301
Target Start/End: Original strand, 15173436 - 15173669
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||| |||    
T  15173436 ccgccgatcatcaatactaaggtaatggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaatgtgatgtaggtggtaatt 15173535  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||| ||||    
T  15173536 ttgatgattaaagaaattaggttttggtttggaattgattgttaaagaataggtaattcaatgaattaacataagaattgaagttcagcctgtaggataa 15173635  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  15173636 acataggttgagtttcctatcaaatttgggattt 15173669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 145 - 301
Target Start/End: Original strand, 15891629 - 15891785
Alignment:
Q  145 ttaacatgatgtaggtggttattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaa 244  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  15891629 ttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaa 15891728  T
Q  245 ttgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15891729 ttgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggattt 15891785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 23415804 - 23415742
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23415804 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 23415742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 18928734 - 18928658
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  18928734 ctaaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 18928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 27557558 - 27557500
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  27557558 aattgaagttcaggttgtagaataaacataggttgagttttctatcaaatttgggattt 27557500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 29045202 - 29045100
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||| ||||||| |||||||||| || |||| |||||| |||||||||||||||    
T  29045202 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataatcataggtagagttttctatcaaatttggga 29045103  T
Q  299 ttt 301  Q
    |||    
T  29045102 ttt 29045100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 15890711 - 15890786
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  15890711 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 15890786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 27329964 - 27330055
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||  | |||||||| ||| ||| ||||||||| |||||||    
T  27329964 ccgccgatcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctg-aaattgagtttaacatgttgtaggt 27330055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 27390704 - 27390795
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||  | |||||||| ||| ||| ||||||||| |||||||    
T  27390704 ccgccgatcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctg-aaattgagtttaacatgttgtaggt 27390795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 1818890 - 1818804
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcct 285  Q
    ||||||||||| |||||||||||||| || ||||||||| |||| | ||| ||||||  ||||||||||||| ||||||||||||||    
T  1818890 aattgattgttgaaagagtaggtaattcattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagtttcct 1818804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 7828024 - 7827972
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 7827972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 12041619 - 12041687
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||||||||||||| |||| |||||||||||  | |||||||||||| || ||||||||||    
T  12041619 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaaattggatttaacatg 12041687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 23150287 - 23150339
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 23150339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 31731903 - 31731979
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||| ||||||||||  | |||||||||||| || |||| ||| | |||||||    
T  31731903 ctaaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggt 31731979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 19655231 - 19655305
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  19655231 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 19655305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 24267900 - 24267849
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24267849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 27572122 - 27572188
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| |||||||||||||    
T  27572122 taaggtaagggtgagactaactttctctaattctaagtcgtataattctg-aaattgaatttaacatg 27572188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 13765246 - 13765188
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  13765246 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 13765188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 15998942 - 15998888
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa 15998888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 19772667 - 19772741
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  19772667 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 19772741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 23956762 - 23956704
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  23956762 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 23956704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 28288659 - 28288717
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  28288659 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 28288717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 31021874 - 31021932
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  31021874 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 31021932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 18703620 - 18703568
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  18703620 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaa 18703568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 18709555 - 18709503
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  18709555 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaa 18709503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 23226010 - 23226066
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttg 295  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||    
T  23226010 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg 23226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 23501725 - 23501650
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| ||||||| |||  ||||||||| |  |||||||||||||||||||||||||| | |||||||    
T  23501725 ctaaggtaagggtgagactaaccttcaataattctaaatg-tttaattctgaaaactgaatttaacaagttgtaggt 23501650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 19401146 - 19401072
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | |||||||    
T  19401146 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggt 19401072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 12943029 - 12942971
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||| | ||||||||||||||||||||||||||    
T  12943029 taagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggg 12942971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 18585615 - 18585549
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| ||| ||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  18585615 ttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 18585549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 18585854 - 18585820
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagt 18585820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 22806790 - 22806716
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| |  |||||||||| |||||||    
T  22806790 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattatatttaacatgttgtaggt 22806716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 27852269 - 27852193
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||||||||||||||||||||||| |||  | ||||||||| || | |||||||| | |||||||||||||    
T  27852269 atcatcaatactaaggtaagggtgggactaaccttcaatcattctaagt-atgtgattctgaaga-tgaatttaacatg 27852193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 28948628 - 28948590
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  28948628 ctaaggtaagggtgagactaactttctctaattctaagt 28948590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 27125477 - 27125514
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27125477 taaggtaagggtgagactaactttctctaattctaagt 27125514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 28103431 - 28103467
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaa 104  Q
    ||||| |||||||||||||||||||||||||||||||    
T  28103431 ccgccgatcatcaatactaaggtaagggtgggactaa 28103467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 20556185 - 20556244
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  20556185 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 20556244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 26923659 - 26923733
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||| |||  ||||  ||||| ||| | ||||||||| ||||||||||||| |||||||    
T  26923659 taaggtaagggtgggactaacattcaataatcttaagtcattga-ttctgaaaattgaatttaacatgttgtaggt 26923733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 10446134 - 10446048
Alignment:
Q  215 agtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||  || ||||||||| |||| | ||| ||||||  | ||||||||||| |||||||||||||| |  ||||||||||||    
T  10446134 agtaggtaaagcattgaattaacgtaaggaatgaggttcagattatagaataaacataggttgagtttccttttgaatttgggattt 10446048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 15704565 - 15704639
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||| | |||  |||||||||||  ||| |||| ||||| || |||||||||| |||||||    
T  15704565 aaggtaagggtgggactagccttcaataattctaagtgttttcattccgaaaattgtatttaacatgttgtaggt 15704639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 29625231 - 29625201
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  29625231 gtaagggtgggactaactttctctaattcta 29625201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 30673401 - 30673433
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaatt 116  Q
    ||||||||||||||||| |||||||||||||||    
T  30673401 ctaaggtaagggtgggattaactttctctaatt 30673433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 85 - 301
Target Start/End: Original strand, 10694245 - 10694461
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaat 184  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||    
T  10694245 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaaactcgatttaacatgatgtaggtggtaattttgatgattagagaaat 10694344  T
Q  185 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 284  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10694345 taggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 10694444  T
Q  285 tatcaaatttgggattt 301  Q
    |||||||||||||||||    
T  10694445 tatcaaatttgggattt 10694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 40620601 - 40620368
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| |||    
T  40620601 ccgccgatcatcaatactaaggtaagggtgggaataactttctctaattctaagtattttaattctgaaaattggatttaacatgatgtaggtggtaatt 40620502  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| ||||    
T  40620501 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggccgtaggataa 40620402  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| |||||||||||||| |||||||||||||||    
T  40620401 acataggttgagtttcctctcaaatttgggattt 40620368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 85 - 295
Target Start/End: Original strand, 10908011 - 10908221
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaat 184  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||    
T  10908011 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaaactcgatttaacatgatgtaggtggtaattttgatgattagagaaat 10908110  T
Q  185 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 284  Q
    |||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10908111 taggttttggtttggaattgattgttaaagagtaggtaattcaattaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 10908210  T
Q  285 tatcaaatttg 295  Q
    |||||||||||    
T  10908211 tatcaaatttg 10908221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 15009032 - 15008804
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctg-aaaactgaatttaacatgatgtaggtggttat 166  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||| ||    
T  15009032 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaaactggatttaacatgatgtaggtggtaat 15008933  T
Q  167 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaata 266  Q
    ||||||||||||||||||||||||||      ||||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||||||||||    
T  15008932 tttgatgattagagaaattaggtttt------gaattgattgttaaagagttggtaattcaatgaattaacataagaattaaagttcaggctgtagaata 15008839  T
Q  267 aacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||| |||||||||||||||| |||||||||||||    
T  15008838 aacataggttgagtttcctataaaatttgggattt 15008804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 301
Target Start/End: Complemental strand, 35660862 - 35660724
Alignment:
Q  165 attttgatgattagagaaattaggttttgg-tttggaattgattgttaa-agagtaggtaatccagtgaattaacataagaattgaagttcaggctgtag 262  Q
    |||||||||||||||||||||||| ||||  |||  ||||||||||| | ||||||||||||||  |||| |||  ||| |||||  ||||||| |||||    
T  35660862 attttgatgattagagaaattagggtttgaatttaaaattgattgttgagagagtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtag 35660763  T
Q  263 aataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||| || | ||| ||||||||||||||||||||||||    
T  35660762 aataatcatatgttaagtttcctatcaaatttgggattt 35660724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 9924207 - 9924131
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  9924207 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 9924131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 9622425 - 9622330
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaattt 294  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  ||||||||||||| |||||||||||||| | ||||||    
T  9622425 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagtttccttttaaattt 9622330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 14187027 - 14186973
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14187027 ccgccgatcatcaatactaaggtaagggtgggagtaactttctctaattctaagt 14186973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 16296809 - 16296707
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  ||||||||  ||| |||||  ||||||| ||| |||||| || ||||| |||||||||||||||||||||    
T  16296809 aattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcaggttgttgaataatcataggttaagtttcctatcaaatttggga 16296710  T
Q  299 ttt 301  Q
    |||    
T  16296709 ttt 16296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 11478652 - 11478718
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    |||||||||||||| ||||||||| ||||||||||||||  | |||||||||||| |||||||||||    
T  11478652 ctaaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaaca 11478718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 15115275 - 15115222
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  15115275 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15115222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 9870443 - 9870519
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||| ||||||||||||||||||||  |||||||||||  | |||||||||||| || |||| |||||||||||||    
T  9870443 ctaagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggt 9870519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 11425995 - 11425943
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 11425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 19434775 - 19434875
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||   || |||||  ||||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  19434775 ttgattgttgaaagagtaggtaatctgatgaattaaagaaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 19434874  T
Q  301 t 301  Q
    |    
T  19434875 t 19434875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 25091705 - 25091653
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 25091653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 53630474 - 53630526
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 53630526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 21249 - 21151
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaa 182  Q
    ||||||||||| || ||||||| |||| |||||||||||  | ||||||||| || ||||||||||||| ||||||| ||  |||||| |||| |||||    
T  21249 ctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaa 21151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 19434558 - 19434596
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19434558 ctaaggtaagggtgggactaactttctctaattctaagt 19434596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 21062694 - 21062656
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21062694 ctaaggtaagggtgggactaactttctctaattctaagt 21062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 28386143 - 28386085
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  28386143 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 28386085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 33849642 - 33849584
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  33849642 taagaatcgatgttcatgttgtagaataaacataggttgagtttcctatcaaatttggg 33849584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 36038710 - 36038652
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  36038710 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 36038652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 49547096 - 49547154
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  49547096 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 49547154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 35811376 - 35811413
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35811376 taaggtaagggtgggactaactttctctaattctaagt 35811413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 10057730 - 10057648
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||| |||||||||||||||||||||||||||||||| |||  ||||||| ||| || | |||||||| | |||||||||||||    
T  10057730 ccgccgatcatcaatactaaggtaagggtgggactaaccttcaataattctgagt-atgtgattctgaaga-tgaatttaacatg 10057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 10356436 - 10356488
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  10356436 taaggtaaggttgggactaactttctctaattctaagttgtataattctgaaa 10356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 14549586 - 14549486
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||| ||||||   ||||||||  ||| |||||  ||||||| |||||||||| || | ||| |||||||||||||||||||||||    
T  14549586 ttgattgttgaaagagtatgtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatt 14549487  T
Q  301 t 301  Q
    |    
T  14549486 t 14549486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 37019723 - 37019648
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||| |||||||||||||||||| |||||  | |||||||| ||| ||| ||||||||| |||||||    
T  37019723 ctaaggtaagggtgtgactaactttctctaattttaagttgtataattctg-aaattgagtttaacatgttgtaggt 37019648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 15344834 - 15344775
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||| |||||||||||    
T  15344834 taagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 15344775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 15613143 - 15613069
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 159  Q
    |||||||||||||||||||||| |||| |||||||||||  | |||||||| ||| || |||||||||| ||||||    
T  15613143 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctg-aaattggatttaacatgttgtagg 15613069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 51993614 - 51993540
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 159  Q
    |||||||||||||||||||||| |||| |||||||||||  | |||||||| ||| || |||||||||| ||||||    
T  51993614 ctaaggtaagggtgggactaaccttctttaattctaagttgtgtaattctg-aaattggatttaacatgttgtagg 51993540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 2424386 - 2424424
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagt 2424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 14549813 - 14549775
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  14549813 ctaaggtaagggtgagactaactttctctaattctaagt 14549775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 15535021 - 15534963
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  15535021 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 15534963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 16277440 - 16277498
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  16277440 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 16277498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 18230640 - 18230578
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| ||||| |||| || ||| | ||||||||||||||||||||||||    
T  18230640 taagaattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttgggattt 18230578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 53387050 - 53387108
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  53387050 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 53387108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 6633541 - 6633589
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 6633589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 18462959 - 18462859
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||| |||||||||||| ||||||||||| | |||||| ||||||  ||||||| ||  | ||||   ||||||| ||||||||||||||    
T  18462959 ttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcagattgtagaacaacaataggtaatgtttcctgtcaaatttgggatt 18462860  T
Q  301 t 301  Q
    |    
T  18462859 t 18462859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 19610376 - 19610324
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| |||||||||||||||||| |||||  | |||||||||||    
T  19610376 taaggtaagggtgagactaactttctctaattttaagttgtataattctgaaa 19610324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 42875849 - 42875797
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||| | |||||||||||  | |||||||||||    
T  42875849 taaggtaagggtgggactaactttatataattctaagttgtataattctgaaa 42875797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 12611810 - 12611751
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  12611810 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 12611751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 15011474 - 15011545
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||| |||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  15011474 gtaagggtaggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 15011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 14186105 - 14186067
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  14186105 ctaaggtaagggtgggagtaactttctttaattctaagt 14186067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 14477568 - 14477502
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| |||||||||||| ||||||||||||  |||||| ||||||  ||||||||||    
T  14477568 ttgattgttgaaagtgtaggtaatccaatgaattaacatagaaattgatgttcagattgtagaataa 14477502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 16998577 - 16998540
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  16998577 taaggtaagagtgagactaactttctctaattctaagt 16998540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 19243652 - 19243577
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  19243652 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 19243577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 27996844 - 27996778
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||||||||||||| |||  ||||||| ||| || | |||||||||| |||||||||||||    
T  27996844 ctaaggtaagggtgggactaaccttcaataattctgagt-atgtgattctgaaaa-tgaatttaacatg 27996778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 46001535 - 46001583
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaa 46001583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 9023 - 8796
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  9023 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactgaattgaacatgatgtaggtggtaattttgatg 8924  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |  || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  8923 agaagggaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 8824  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||| |||||    
T  8823 gttgagtttcctatcaaatttgagattt 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 74 - 296
Target Start/End: Complemental strand, 5092 - 4877
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5092 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatg 4993  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||| ||    
T  4992 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagtt-------tagaataaacatag 4900  T
Q  274 gttgagtttcctatcaaatttgg 296  Q
    |||||||||||| ||||||||||    
T  4899 gttgagtttcctttcaaatttgg 4877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 74 - 296
Target Start/End: Complemental strand, 5092 - 4877
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5092 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatg 4993  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||| ||    
T  4992 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagtt-------tagaataaacatag 4900  T
Q  274 gttgagtttcctatcaaatttgg 296  Q
    |||||||||||| ||||||||||    
T  4899 gttgagtttcctttcaaatttgg 4877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 180; Significance: 3e-97; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 2000 - 1773
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  2000 atcatcaatactaaggaaagggtgggactaactttatctaattctaagtattttaattctgaaaacggtatttaacatgatgtaggtggtaattttgatg 1901  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  1900 attagagaaattattttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 1801  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||| ||||||    
T  1800 gttgagtttcctatcaaattttggattt 1773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 5044 - 5082
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5044 ctaaggtaagggtgggactaactttctctaattctaagt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 10754 - 10792
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10754 ctaaggtaagggtgggactaactttctctaattctaagt 10792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 21766 - 21993
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatg 173  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||| |||||||||    
T  21766 atcatcaatactaaggtaaggatgggactaactttctctaattctaagtattttaaatttgaaaactggatttaacatgatgtaggtggtaattttgatg 21865  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| ||    
T  21866 attagagaaattaggttttggtttgaaaatgattgttaaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacatag 21965  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  21966 gttgagtttcctatcaaatttgggattt 21993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 11292 - 11059
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||  ||||||||| ||||||||||| |||    
T  11292 ccgccgatcatcaatactaaggtaagggtgagtctaactttctctaattccaagtattttaattctgaaaactagatttaacataatgtaggtggtaatt 11193  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  11192 ttgatgattagagaaattaggttttgatttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 11093  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| |  |||||||||||||||||||||||||||    
T  11092 acatatcttgagtttcctatcaaatttgggattt 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 6437 - 6288
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttatt 167  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||||||||| |||    
T  6437 ccgccgatcatcaatactaatgtaagggtgggactaactttctctaattctaagtattttaattttgaaaactggatttgacatgatgtaggtggtaatt 6338  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6337 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 39965 - 40027
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||| |||||||||    
T  39965 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggattt 40027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 59771 - 59837
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| ||| ||||||||||||| |||||||| |||| |||||| ||| ||| ||||||||||    
T  59771 ttgattgttgaaatagtaggtaatccaatgaattaatataaaaattgatgtttaggttgtagaataa 59837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 166 - 297
Target Start/End: Original strand, 14667 - 14798
Alignment:
Q  166 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaat 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  14667 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaat 14766  T
Q  266 aaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||| ||||||||||||||||||||||||||    
T  14767 aaacataggttgagtttcctatcaaatttggg 14798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 166 - 297
Target Start/End: Original strand, 23725 - 23856
Alignment:
Q  166 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaat 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  23725 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaat 23824  T
Q  266 aaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||| ||||||||||||||||||||||||||    
T  23825 aaacataggttgagtttcctatcaaatttggg 23856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 12178 - 12080
Alignment:
Q  200 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |||||||||| || ||||   ||||||||||||||||||||    
T  12178 aattgattgttaaagagtaggtaacccaatgaattaacataagaattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaatttggga 12080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 43866 - 44003
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||| || | |||||   ||  |||||| ||| ||| ||||||    
T  43866 attttgatgattagagaaattaggttttgatttggaattgattgttgaaaaagtagataattcaattaattagtgtacaaattgatgtttaggttgtaga 43965  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  43966 ataaacataggttgagtttcctattgaatttgggattt 44003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 39174 - 39311
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||| ||| ||||| |||| || |||||||   ||  |  | | ||||||| ||||||    
T  39174 attttgatctttagagaaattaggttttgatttggaattgattgttgaaaaagtagataattcaatgaattagtgtacaagataatgttcaggttgtaga 39273  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
     |||||| ||||||| ||||||||  ||||||||||||    
T  39274 ttaaacataggttgaatttcctattgaatttgggattt 39311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 301
Target Start/End: Complemental strand, 35543 - 35328
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaaa 183  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||  ||| |||| |||| |||||||  |  |||||   ||| | |||     
T  35543 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaat-tgagtttagcatgttgtaggt--tagttttgggaatttgggaa- 35448  T
Q  184 ttaggttttggtttgg-aattgattgttaaa-gagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtt 281  Q
    ||||||||||   | | ||||| |||||||| | ||| |||||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  35447 ttaggttttgaagtcgtaattggttgttaaaagtgtatgtaatccaataaattaacataagaattgatgttcaggttgtagaataaacataggttgagtt 35348  T
Q  282 tcctatcaaatttgggattt 301  Q
    ||||||  ||||||||||||    
T  35347 tcctattgaatttgggattt 35328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 18493 - 18431
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18493 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 18431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 4708 - 4784
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| | |||||||    
T  4708 ctaaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggt 4784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 19452 - 19512
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggat 299  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  19452 taagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttgggat 19512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 42571 - 42509
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  42571 taagaattgaagttcaggctgtagaataaacctaggttgagtttcctatcaaatttggaattt 42509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 5695 - 5832
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    |||||||||||||||||||||||||||||  |  |||||||||||| ||| | ||| |||| || |||||||   ||  |||||| ||||||| ||||||    
T  5695 attttgatgattagagaaattaggttttgaatcagaattgattgttgaaaaactagataattcaatgaattagtgtacaaattgatgttcaggttgtaga 5794  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| ||||||||||||| ||  ||||||||||||    
T  5795 ataaacataggttgagtttcccattgaatttgggattt 5832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 30705 - 30631
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||| ||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  30705 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 30631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 35565 - 35702
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaa-ttgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||| ||||||||||||||||||| ||| ||| |||||||||||| ||||| |||| || |||||||   ||  |||||   |||||| ||||||    
T  35565 attttgatggttagagaaattaggttttgatttagaatttgattgttaaaaagtagataattcaatgaattagtgtacaaattgttattcaggttgtaga 35664  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||| || ||||| ||||||||||||||||||| ||||    
T  35665 ataatcataggtttagtttcctatcaaatttggaattt 35702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 1057 - 1133
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||||||||||||| |||||||||  | |||||||||||| ||||||||||| | |||||||    
T  1057 ctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggt 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 20007 - 19931
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  20007 ctaaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggt 19931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 22058 - 21958
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||  |||||||||  ||||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  22058 ttgattgttgaaagagtaggtaatctgatgaattaaggtaagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 21959  T
Q  301 t 301  Q
    |    
T  21958 t 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 146776 - 146723
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||| ||||||||||||||| ||||||||||||||  | |||||||||||    
T  146776 ctaaggtatgggtgggactaacttactctaattctaagttgtataattctgaaa 146723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 110222 - 110151
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||| ||||||||||| | |||||||    
T  110222 gtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggt 110151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 66194 - 66294
Alignment:
Q  200 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggat 299  Q
    |||||||| | ||||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| |||||| ||||||||||||||||    
T  66194 aattgattttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttt-ctatcaaatttgggat 66292  T
Q  300 tt 301  Q
    ||    
T  66293 tt 66294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 328287 - 328321
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattct 118  Q
    |||||||||||||||||||||||||||||||||||    
T  328287 ctaaggtaagggtgggactaactttctctaattct 328321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 115
Target Start/End: Complemental strand, 73139 - 73109
Alignment:
Q  85 taaggtaagggtgggactaactttctctaat 115  Q
    |||||||||||||||||||||||||||||||    
T  73139 taaggtaagggtgggactaactttctctaat 73109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 7163 - 7221
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7163 taagaatcgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 7221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 32042 - 31981
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  32042 taagagttgaagttcaggctgtagaataa-cataggttgagtttcctatcaaatttgggattt 31981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 15340 - 15287
Alignment:
Q  69 cgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15340 cgccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 191 - 116
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  191 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 8925 - 9009
Alignment:
Q  213 agagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| || | ||||||||| |||||||||| ||||||| ||||||||||||  ||||||||||||||||  ||||||||    
T  8925 agagtaggtagtcgaatgaattaacgtaagaattgatgttcaggttgtagaataaacttaggttgagtttcctattgaatttggg 9009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 117805 - 117873
Alignment:
Q  83 actaaggtaagggtgggactaactttctctaattctaagtaatttaattctg-aaaactgaatttaaca 150  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| |||| |||| |||||||||||    
T  117805 actaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaaca 117873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 112965 - 113052
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctg-aaaactgaatttaacatgatgtaggtggttattttg 170  Q
    ||||| ||||||||||||||||||||||||||||||||| || ||| |||| |||| ||||||||||| | ||||||| || ||||||    
T  112965 ctaagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttg 113052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 17939 - 17993
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  17939 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 17993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 127459 - 127561
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||| ||| ||||||||| |||| | ||| |||||   ||||||||||||| |||||||||||||| |  |||||||||    
T  127459 aattgattgttgaaagagtaggtaaaccattgaattaacgtaaggaatgaggttcaaattgtagaataaacataggttgagtttccttttgaatttggga 127558  T
Q  299 ttt 301  Q
    |||    
T  127559 ttt 127561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 169339 - 169281
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  169339 taagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 169281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 176692 - 176634
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  176692 taagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 176634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 77740 - 77687
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  77740 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 77687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 32046 - 31994
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  32046 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 31994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 37353 - 37301
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  37353 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 37301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 695 - 770
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||| ||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  695 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 1257 - 1205
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  1257 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 468 - 520
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  468 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 5435 - 5352
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||| ||||| ||| |||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| |||||||||||||    
T  5435 ccgccgatcattaattctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacatg 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 9128 - 9038
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||| |||||||||||||||||||||||||||||||| |||  ||||||| ||| || |||||||| |||||| |||||||| | |||||||    
T  9128 ccgccgatcatcaatactaaggtaagggtgggactaaccttcagtaattctgagt-atgtaattctg-aaactggatttaacaggttgtaggt 9038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 13416 - 13491
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||||||||   |||||||||||||||||||||||||| | |||||||    
T  13416 ctaaggtaagggtgggactaaccttcaataattctaaggg-tttaattctgaaaactgaatttaacaagttgtaggt 13491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 34391 - 34339
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  34391 taaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaa 34339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 6003 - 5929
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 159  Q
    |||||||||||||||||||||| |||| |||||||||||  | |||||||| ||| ||||||||||||| ||||||    
T  6003 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctg-aaattgaatttaacatgttgtagg 5929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 78185 - 78237
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  78185 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 78237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 24131 - 24183
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  24131 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 30122 - 30048
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||| |||  ||| |||||||  |||||||||||||| || |||||||||| |||||||    
T  30122 aaggtaagggtgggactaaccttcaataaatctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 30048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 135503 - 135578
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| ||| ||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  135503 ctaaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggt 135578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 28029 - 27954
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  28029 taaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 27954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 42887 - 42812
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  42887 taaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 42812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 2199 - 2253
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    ||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaa 2253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 2248 - 2310
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||| ||||    
T  2248 taagaattgatgttcaggttgtagaataatcacaggttaagtttcctatcaaatttggcattt 2310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 2604 - 2555
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||    
T  2604 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 2555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 2178 - 2076
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| || ||| |||||||||||||||    
T  2178 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagatttttctatcaaatttggga 2079  T
Q  299 ttt 301  Q
    |||    
T  2078 ttt 2076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 4438 - 4340
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaa 182  Q
    ||||||||| | |||||||||| |||| |||||||||||  | ||||||||| ||||| |||||||||| ||||||| ||  |||||| |||| |||||    
T  4438 ctaaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaa 4340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 3863 - 3805
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  3863 taagaatcgatgttcaggttgttgaataaacataggttgagtttcctatcaaatttggg 3805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 8063 - 8005
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  8063 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 8005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 19260 - 19206
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  19260 ctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 19206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 9994 - 9932
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||| |||||||||    
T  9994 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggattt 9932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 31161 - 31086
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||||| ||| || |||||||||||| || |||||||| | |||||||    
T  31161 ctaaggtaagggtgggactaaccttcaataattctgagt-atgtaattctgaaaattggatttaacaagttgtaggt 31086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 60948 - 60850
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaa 182  Q
    ||||||||||| || ||||||| |||| |||||||||||  | ||||||||| || ||||||||||||| ||||||| ||  |||||| |||| |||||    
T  60948 ctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaa 60850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 67174 - 67108
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 150  Q
    ||||||||| |||||||||||||||||||||||| ||||  | |||||||||||| || ||||||||    
T  67174 ctaaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaaca 67108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 61847 - 61901
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  61847 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa 61901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 17043 - 16977
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  17043 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 16977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 26574 - 26508
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  26574 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 26508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 1234 - 1165
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||| || ||||||||||||||||||||| ||||||||||  ||||||||||||  | |||||||||||    
T  1234 ccgccgattatcaatactaaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaa 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 196 - 233
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaattctaagt 233  T

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Target: scaffold0256 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 1845 - 1913
Alignment:
Q  83 actaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||  ||||||||||||||||||||||||||||||  | |||||||| ||| |||||||||||||    
T  1845 actaaggtgtgggtgggactaactttctctaattctaagtggtataattctg-aaattgaatttaacatg 1913  T

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Target: scaffold0241 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 3235 - 3182
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  3235 ctaaggtaagggttggactaactttctctaattctaagttgtataattctgaaa 3182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 13391 - 13444
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||| ||||  | |||||||||||    
T  13391 ctaaggtaagggtgggactaactttctctaattccaagttgtataattctgaaa 13444  T

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Target: scaffold0149 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 29572 - 29625
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||||||||||||| |||||||||||  | |||||||||||    
T  29572 ctaaggtaagggtgggactaactttctataattctaagttgtataattctgaaa 29625  T

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Target: scaffold0149; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 21466 - 21376
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||   ||||||||  ||| |||||  ||||||| |||||||||| || || || ||||| ||||||||||||||||||    
T  21466 aaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggattt 21376  T

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Target: scaffold0149; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 21664 - 21626
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  21664 ctaaggtaagggtgggactagctttctctaattctaagt 21626  T

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Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 5432 - 5383
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 5383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 12534 - 12585
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||| |||||||||||||||||||||  | |||||||||||    
T  12534 aaggtaagggtgggaataactttctctaattctaagttgtataattctgaaa 12585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 58798 - 58761
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  58798 taaggtaagggtgggactaactttctctaattctaagt 58761  T

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Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 168998 - 169051
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||| ||||||||||||||||||||||||||||||  | |||||||||||    
T  168998 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaa 169051  T

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Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 143663 - 143611
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 143611  T

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Target: scaffold1939 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 65 - 1
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||| | ||||||    
T  65 aattgattgttgaaagagtaggtaatccaaagaattaacataagaattgatgttcatgttgtaga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 4714 - 4766
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  4714 taaggtaagggtcggactaactttctctaattctaagttgtataattctgaaa 4766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 20085 - 20160
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||| ||||||||| ||| ||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  20085 ctaaggtaagggcgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggt 20160  T

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Target: scaffold0217 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 28650 - 28550
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||| |||||||||| | ||||||||||||| |||||| ||||||| ||||||||||  | | ||   ||||||| ||||||||||||||    
T  28650 ttgattgttgaaagtgtaggtaatctaatgaattaacataaaaattgatgttcaggttgtagaataataatacgtaatgtttcctgtcaaatttgggatt 28551  T
Q  301 t 301  Q
    |    
T  28550 t 28550  T

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Target: scaffold0175 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 8695 - 8620
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | |||||||    
T  8695 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggt 8620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 7330 - 7254
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    ||||||| |||||||||||||| |||| |||||||||||  | |||||||||||| || |||| ||||| |||||||    
T  7330 ctaaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggt 7254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 79101 - 79049
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  79101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 79049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 4993 - 4918
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 159  Q
    |||||||||||||||||||||| |||| |||||||||||  | ||||||||| |  || |||||||||| ||||||    
T  4993 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtagg 4918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 7606 - 7535
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 157  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| ||||    
T  7606 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaatgtatttaacatgttgta 7535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 5712 - 5759
Alignment:
Q  90 taagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaa 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 398615 - 398540
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 159  Q
    |||||||||||||||||||||| |||| |||||||| ||  | ||||||||| || || |||||||||| ||||||    
T  398615 ctaaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtagg 398540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 1039 - 977
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||| |||| ||||||| ||||| |||| || ||||| ||||||||||||||||||||||||    
T  1039 taagagttgatgttcaggttgtaggataatcataggttaagtttcctatcaaatttgggattt 977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 2752 - 2650
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||  ||| |||||| || | ||| |||||||||||||||||||||    
T  2752 aattgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcagattgttgaataatcatacgttaagtttcctatcaaatttggga 2653  T
Q  299 ttt 301  Q
    |||    
T  2652 ttt 2650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 5304 - 5342
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagt 5342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 571 - 533
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  571 ctaaggtaagggtgagactaactttctctaattctaagt 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 2024 - 1962
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||| ||| |||||||||| |  ||||| ||||||||||||||||||||||||    
T  2024 taagaattgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggattt 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 6688 - 6722
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagt 6722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 6910 - 6976
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| ||| ||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  6910 ttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 16667 - 16590
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||||||  |||||||||||||| ||| |||||||||||||  | | |||||| |||||| ||||||||||    
T  16667 atcatcaatactaagcaaagggtgggactaaatttatctaattctaagttgtatgattctg-aaactggatttaacatg 16590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 8779 - 8677
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| || ||| ||| || |||| |||||| |||||||||||||||    
T  8779 aattgattgttgaaagagtaggtaatcagatgaattaaggtaataattggtgttcaggttgcagagtaatcataggtagagttttctatcaaatttggga 8680  T
Q  299 ttt 301  Q
    |||    
T  8679 ttt 8677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 15020 - 14942
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||||||||||| |||||||||||||  || | |||||||||||  |  ||||||||||| || ||||||||||    
T  15020 atcatcaatactaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaaattggatttaacatg 14942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 17040 - 16962
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||||||||||| |||||||||||||  || | |||||||||||  |  ||||||||||| || ||||||||||    
T  17040 atcatcaatactaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaaattggatttaacatg 16962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 8990 - 8932
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || | ||| ||||||||||||||||||||    
T  8990 taagaattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg 8932  T

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Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 106050 - 106088
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  106050 ctaaggtaagggtgtgactaactttctctaattctaagt 106088  T

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Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 13032 - 13107
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  13032 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 13107  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 21746 - 21672
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||| | |||  |||||||||||  ||||||| |||||| || |||||||||| |||||||    
T  21746 aaggtaagggtgggactagccttcaataattctaagtgttttaattttgaaaattgtatttaacatgttgtaggt 21672  T

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Target: scaffold0407 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 11274 - 11311
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11274 taaggtaagggtgagactaactttctctaattctaagt 11311  T

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Target: scaffold0153 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 5366 - 5329
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  5366 ccgccgatcatcaatactaaggtaagggtgggactaac 5329  T

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Target: scaffold0153; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 12386 - 12349
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  12386 ccgccgatcatcaatactaaggtaagggtgggactaac 12349  T

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Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 23597 - 23556
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  23597 atcatcaatactaaggtaagggtaggactagctttctctaat 23556  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 298
Target Start/End: Original strand, 18976 - 19073
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| |||||||||||| |||| ||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  18976 ttgattgttgaaagtgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 19073  T

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Target: scaffold0042 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 29441 - 29365
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||  |||| |||||||||||  | | |||||||||| || |||||||| | |||||||    
T  29441 ctaaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggt 29365  T

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Target: scaffold1439 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 975 - 916
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  975 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 916  T

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Target: scaffold0080 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 21793 - 21867
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||| ||||||||||| |||||||||||||||||  | || ||||| ||| |||||||| |||| |||||||    
T  21793 taaggtaatggtgggactaaatttctctaattctaagttgtatagttctg-aaattgaatttagcatgttgtaggt 21867  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 52543 - 52618
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 159  Q
    ||||| |||||||||||||||| |||  |||||||||||  | ||||||||| || || |||||||||| ||||||    
T  52543 ctaagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtagg 52618  T

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Target: scaffold0625 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 5860 - 5914
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 138  Q
    ||||||||| ||||  |||||||||||||||||||||||  | ||||||||||||    
T  5860 ctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaaa 5914  T

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Target: scaffold0285 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 19806 - 19768
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  19806 ctaaggtaagggtgagactgactttctctaattctaagt 19768  T

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Target: scaffold0106 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 21879 - 21821
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||| ||||||| |||||||||| || || || || |||||||||||||||||||||    
T  21879 aattgatgttcaggttgtagaataatcatagattaagcttcctatcaaatttgggattt 21821  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 22141 - 22075
Alignment:
Q  94 ggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  22141 ggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 22075  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 38558 - 38624
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| |||||||||||| ||||||||||| | |||||| ||||||| ||| ||||||    
T  38558 ttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcaggttgtggaataa 38624  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 3053 - 3126
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||| |||  |||||||||||  | | |||||||||| ||||||||||| | |||||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggt 3126  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 174261 - 174323
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| | ||||| |||||||||| || | ||| |||||||||||||||||| |||||    
T  174261 taagaattgatggtcaggttgtagaataatcatatgttaagtttcctatcaaatttgagattt 174323  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 126304 - 126341
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  126304 ctaaggtaagg-tgggactaactttctctaattctaagt 126341  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 96451 - 96354
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggttattttgatgattagagaa 182  Q
    |||| |||| ||||||||||||||||||||||||| |||  | | |||||||||| || |||||||| | ||||||| ||  |||||| |||| |||||    
T  96451 ctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaa-tggatttaacaagttgtaggttgtagttttgaggattggagaa 96354  T

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Target: scaffold0112 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 2942 - 2889
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 137  Q
    ||||||||||||||||| ||||||||||||||| || ||  | |||||||||||    
T  2942 ctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 2889  T

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Target: scaffold0686 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 1507 - 1475
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtggga 100  Q
    ||||| |||||||||||||||||||||||||||    
T  1507 ccgccgatcatcaatactaaggtaagggtggga 1475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 12649 - 12697
Alignment:
Q  112 taattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  12649 taattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 12697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 3892 - 3959
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||| ||||||||| |||  ||||| | |||| | |||||||||||| |||||||||||||    
T  3892 ctaaggtaagggagggactaaccttcaataattatgagta-tgtaattctgaaaattgaatttaacatg 3959  T

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Target: scaffold0254 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 21700 - 21625
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  21700 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 21625  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 5520 - 5476
Alignment:
Q  71 ccaatcatcaatactaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||    
T  5520 ccaatcatctaatctaaggtaagggtgggactacctttctctaat 5476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 13698 - 13624
Alignment:
Q  76 catcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    ||||||||||| ||||||||||||| |||| |||  ||||||||||| || | |||||||| | |||||||||||||    
T  13698 catcaatactacggtaagggtgggagtaaccttcaataattctaagt-atgtgattctgaaga-tgaatttaacatg 13624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 12239 - 12164
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 160  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  12239 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 12164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 126840 - 126776
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 152  Q
    |||||||||||||||| | ||   |||||||||||  |||||||||||||| || ||||||||||    
T  126840 ggtaagggtgggactagccttaaataattctaagtgttttaattctgaaaattgtatttaacatg 126776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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