View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0652_low_43 (Length: 234)

Name: NF0652_low_43
Description: NF0652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0652_low_43
NF0652_low_43
[»] scaffold0029 (1 HSPs)
scaffold0029 (2-218)||(111752-111969)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-218)||(11818-12036)
scaffold0026 (8-187)||(111563-111741)
[»] scaffold0006 (1 HSPs)
scaffold0006 (7-218)||(50055-50265)
[»] scaffold1773 (1 HSPs)
scaffold1773 (7-218)||(1054-1264)
[»] chr6 (31 HSPs)
chr6 (1-218)||(29614115-29614332)
chr6 (2-199)||(23057809-23058006)
chr6 (8-197)||(18800314-18800503)
chr6 (8-186)||(23839075-23839253)
chr6 (8-198)||(10986169-10986359)
chr6 (52-218)||(930064-930229)
chr6 (8-186)||(4477734-4477912)
chr6 (9-216)||(12168244-12168447)
chr6 (9-216)||(19785840-19786043)
chr6 (9-216)||(19878337-19878540)
chr6 (9-216)||(19287153-19287356)
chr6 (9-216)||(19884113-19884316)
chr6 (9-187)||(34639986-34640162)
chr6 (9-187)||(34646660-34646836)
chr6 (8-184)||(21565214-21565390)
chr6 (104-187)||(25469704-25469785)
chr6 (131-198)||(24512832-24512899)
chr6 (134-186)||(9187498-9187550)
chr6 (130-186)||(25348486-25348542)
chr6 (130-184)||(25598643-25598697)
chr6 (130-186)||(25397172-25397228)
chr6 (115-187)||(31252406-31252478)
chr6 (98-187)||(11288668-11288758)
chr6 (130-186)||(19471335-19471391)
chr6 (130-184)||(2286769-2286823)
chr6 (152-186)||(18659450-18659484)
chr6 (152-186)||(24441673-24441707)
chr6 (134-187)||(15458492-15458545)
chr6 (134-187)||(15465087-15465140)
chr6 (159-187)||(28288509-28288537)
chr6 (152-192)||(29415551-29415591)
[»] chr7 (31 HSPs)
chr7 (2-199)||(15168046-15168243)
chr7 (2-191)||(18873231-18873420)
chr7 (7-218)||(12709813-12710023)
chr7 (7-218)||(13122884-13123094)
chr7 (3-218)||(13743581-13743794)
chr7 (2-182)||(10895795-10895975)
chr7 (8-190)||(14422861-14423043)
chr7 (8-186)||(16009454-16009631)
chr7 (9-216)||(12590614-12590818)
chr7 (9-216)||(13007313-13007516)
chr7 (18-184)||(16677180-16677348)
chr7 (18-184)||(17651416-17651584)
chr7 (131-198)||(21230948-21231015)
chr7 (131-186)||(11382871-11382926)
chr7 (131-186)||(11389348-11389403)
chr7 (131-198)||(20311038-20311107)
chr7 (123-186)||(13679485-13679548)
chr7 (132-187)||(2971254-2971309)
chr7 (132-187)||(20906461-20906516)
chr7 (132-186)||(11311059-11311113)
chr7 (151-192)||(831628-831669)
chr7 (151-192)||(1196808-1196849)
chr7 (151-192)||(34958578-34958619)
chr7 (130-186)||(46625961-46626017)
chr7 (132-187)||(29181109-29181164)
chr7 (131-197)||(148619-148685)
chr7 (134-187)||(31155396-31155449)
chr7 (171-199)||(14129216-14129244)
chr7 (171-199)||(14136062-14136090)
chr7 (171-199)||(14433034-14433062)
chr7 (135-187)||(16091078-16091130)
[»] chr5 (15 HSPs)
chr5 (2-191)||(22751012-22751201)
chr5 (8-197)||(38144526-38144714)
chr5 (8-186)||(28370055-28370232)
chr5 (8-186)||(19512263-19512441)
chr5 (9-191)||(23528511-23528690)
chr5 (103-186)||(18407944-18408027)
chr5 (131-198)||(22438735-22438803)
chr5 (103-186)||(23111200-23111283)
chr5 (132-187)||(19236900-19236955)
chr5 (131-197)||(42961566-42961632)
chr5 (134-187)||(22461158-22461211)
chr5 (134-187)||(22467782-22467835)
chr5 (132-187)||(20781744-20781799)
chr5 (158-187)||(17021913-17021942)
chr5 (133-197)||(34830086-34830149)
[»] chr3 (26 HSPs)
chr3 (2-199)||(14762745-14762942)
chr3 (2-184)||(20247791-20247973)
chr3 (2-184)||(38310802-38310984)
chr3 (8-184)||(24192832-24193009)
chr3 (8-186)||(9534205-9534382)
chr3 (8-187)||(23370505-23370684)
chr3 (9-216)||(41455068-41455272)
chr3 (9-187)||(24933828-24934003)
chr3 (18-197)||(16801457-16801635)
chr3 (8-184)||(55499104-55499281)
chr3 (103-186)||(17240513-17240596)
chr3 (125-186)||(18929239-18929300)
chr3 (132-187)||(13302240-13302295)
chr3 (132-187)||(13323787-13323842)
chr3 (132-187)||(12033444-12033499)
chr3 (132-187)||(13312896-13312951)
chr3 (132-187)||(17131732-17131787)
chr3 (132-187)||(51301589-51301644)
chr3 (113-187)||(10389443-10389517)
chr3 (113-187)||(10414532-10414606)
chr3 (113-187)||(10421202-10421276)
chr3 (132-187)||(14865846-14865901)
chr3 (152-187)||(23392819-23392854)
chr3 (130-184)||(16801027-16801081)
chr3 (151-187)||(2247649-2247685)
chr3 (136-192)||(10833303-10833359)
[»] chr4 (18 HSPs)
chr4 (1-218)||(8045801-8046017)
chr4 (1-218)||(11847977-11848200)
chr4 (9-187)||(53483584-53483760)
chr4 (131-198)||(15408139-15408206)
chr4 (130-186)||(8834895-8834951)
chr4 (130-186)||(13888641-13888697)
chr4 (132-184)||(14486661-14486713)
chr4 (130-186)||(15245215-15245271)
chr4 (130-181)||(22724691-22724742)
chr4 (151-192)||(15747551-15747592)
chr4 (130-186)||(15308120-15308176)
chr4 (132-187)||(16146830-16146885)
chr4 (132-187)||(27906266-27906321)
chr4 (156-186)||(15069781-15069811)
chr4 (156-186)||(15076381-15076411)
chr4 (130-187)||(14912081-14912138)
chr4 (166-198)||(37837766-37837798)
chr4 (166-198)||(42596465-42596497)
[»] scaffold0924 (1 HSPs)
scaffold0924 (7-218)||(719-931)
[»] scaffold0058 (1 HSPs)
scaffold0058 (3-218)||(164-377)
[»] chr8 (15 HSPs)
chr8 (7-218)||(23866490-23866700)
chr8 (8-187)||(44477500-44477678)
chr8 (8-187)||(44492658-44492836)
chr8 (8-184)||(8727735-8727911)
chr8 (9-210)||(17054472-17054668)
chr8 (103-186)||(23482053-23482136)
chr8 (8-197)||(27940841-27941032)
chr8 (130-199)||(18614271-18614340)
chr8 (131-198)||(14056552-14056619)
chr8 (130-186)||(39364919-39364975)
chr8 (131-198)||(25111976-25112043)
chr8 (132-199)||(29643373-29643440)
chr8 (132-187)||(24320670-24320725)
chr8 (130-186)||(21931696-21931752)
chr8 (166-198)||(44474690-44474722)
[»] chr2 (17 HSPs)
chr2 (18-218)||(26583715-26583913)
chr2 (8-186)||(6483595-6483772)
chr2 (8-186)||(6487062-6487239)
chr2 (8-199)||(19661441-19661631)
chr2 (8-184)||(23878885-23879060)
chr2 (8-184)||(23089057-23089233)
chr2 (8-186)||(23101463-23101641)
chr2 (48-187)||(5706023-5706160)
chr2 (103-186)||(23265114-23265197)
chr2 (103-186)||(23280182-23280265)
chr2 (125-186)||(21908353-21908414)
chr2 (130-186)||(24661576-24661632)
chr2 (132-187)||(10577-10632)
chr2 (132-187)||(25180929-25180984)
chr2 (98-196)||(26885148-26885246)
chr2 (134-198)||(23168287-23168351)
chr2 (134-198)||(23579544-23579608)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-218)||(1867-2082)
scaffold0117 (1-218)||(8544-8759)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-197)||(11219-11407)
[»] scaffold0025 (1 HSPs)
scaffold0025 (8-184)||(14398-14575)
[»] chr1 (18 HSPs)
chr1 (8-186)||(20437024-20437202)
chr1 (9-216)||(41111916-41112119)
chr1 (122-199)||(32651563-32651640)
chr1 (122-186)||(18712790-18712854)
chr1 (131-186)||(19663517-19663572)
chr1 (130-186)||(20805320-20805376)
chr1 (131-186)||(11158093-11158148)
chr1 (130-184)||(10811785-10811839)
chr1 (132-187)||(20851132-20851187)
chr1 (132-187)||(20857759-20857814)
chr1 (132-187)||(21706276-21706331)
chr1 (132-187)||(21710818-21710873)
chr1 (156-186)||(24476350-24476380)
chr1 (156-186)||(25091418-25091448)
chr1 (152-185)||(18271338-18271371)
chr1 (152-185)||(18275992-18276025)
chr1 (166-198)||(11946472-11946504)
chr1 (171-199)||(21665177-21665205)
[»] scaffold0553 (1 HSPs)
scaffold0553 (8-187)||(10195-10374)
[»] scaffold0544 (1 HSPs)
scaffold0544 (8-187)||(1525-1704)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-197)||(18038-18235)
[»] scaffold0154 (1 HSPs)
scaffold0154 (18-197)||(30743-30923)
[»] scaffold0796 (2 HSPs)
scaffold0796 (9-192)||(1727-1907)
scaffold0796 (9-192)||(5750-5930)
[»] scaffold0456 (4 HSPs)
scaffold0456 (104-191)||(904-991)
scaffold0456 (104-191)||(8049-8136)
scaffold0456 (1-41)||(859-899)
scaffold0456 (1-41)||(8004-8044)
[»] scaffold0476 (1 HSPs)
scaffold0476 (8-184)||(3295-3472)
[»] scaffold0129 (1 HSPs)
scaffold0129 (107-193)||(45268-45353)
[»] scaffold0077 (1 HSPs)
scaffold0077 (8-184)||(3624-3800)
[»] scaffold0004 (2 HSPs)
scaffold0004 (103-199)||(116868-116964)
scaffold0004 (152-185)||(60441-60474)
[»] scaffold0222 (1 HSPs)
scaffold0222 (103-186)||(16792-16875)
[»] scaffold0107 (1 HSPs)
scaffold0107 (131-198)||(40520-40587)
[»] scaffold0310 (1 HSPs)
scaffold0310 (131-198)||(17643-17711)
[»] scaffold0461 (1 HSPs)
scaffold0461 (103-186)||(8-91)
[»] scaffold0146 (1 HSPs)
scaffold0146 (103-186)||(13604-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (103-186)||(101928-102011)
[»] scaffold0019 (1 HSPs)
scaffold0019 (131-198)||(135473-135540)
[»] scaffold2054 (1 HSPs)
scaffold2054 (98-218)||(680-800)
[»] scaffold0235 (1 HSPs)
scaffold0235 (133-198)||(22581-22646)
[»] scaffold0815 (1 HSPs)
scaffold0815 (135-198)||(1453-1516)
[»] scaffold0124 (2 HSPs)
scaffold0124 (131-186)||(34276-34331)
scaffold0124 (130-187)||(35438-35495)
[»] scaffold0138 (1 HSPs)
scaffold0138 (130-186)||(12296-12352)
[»] scaffold0317 (1 HSPs)
scaffold0317 (123-186)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (131-186)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (115-196)||(493019-493099)
[»] scaffold0609 (1 HSPs)
scaffold0609 (115-187)||(5857-5929)
[»] scaffold0096 (1 HSPs)
scaffold0096 (130-190)||(39503-39563)
[»] scaffold0790 (1 HSPs)
scaffold0790 (158-197)||(5480-5519)
[»] scaffold0348 (1 HSPs)
scaffold0348 (132-187)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (132-187)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (132-187)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (132-186)||(1913-1967)
[»] scaffold0261 (1 HSPs)
scaffold0261 (132-198)||(23558-23624)
[»] scaffold0335 (1 HSPs)
scaffold0335 (130-186)||(2628-2684)
[»] scaffold0249 (1 HSPs)
scaffold0249 (113-187)||(13894-13969)
[»] scaffold0053 (1 HSPs)
scaffold0053 (132-187)||(79490-79545)
[»] scaffold0481 (1 HSPs)
scaffold0481 (140-185)||(676-721)
[»] scaffold0028 (1 HSPs)
scaffold0028 (134-199)||(69749-69814)
[»] scaffold1128 (1 HSPs)
scaffold1128 (166-198)||(529-561)
[»] scaffold0600 (1 HSPs)
scaffold0600 (130-186)||(732-788)
[»] scaffold0453 (1 HSPs)
scaffold0453 (115-187)||(10550-10622)
[»] scaffold0180 (1 HSPs)
scaffold0180 (137-186)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (132-184)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (130-186)||(121902-121958)
scaffold0031 (130-186)||(132778-132834)


Alignment Details
Target: scaffold0029 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 111752 - 111969
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  111752 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctca 111851  T
Q  102 atttattttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaat 200  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111852 atttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaat 111951  T
Q  201 tagacagcaagaatcggt 218  Q
    ||||||||||| ||||||    
T  111952 tagacagcaaggatcggt 111969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 179; Significance: 1e-96; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 12036 - 11818
Alignment:
Q  1 acaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctc 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| |||    
T  12036 acaacaaagattaagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctc 11937  T
Q  101 aatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-a 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11936 aatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaga 11837  T
Q  200 ttagacagcaagaatcggt 218  Q
    ||| || ||| ||||||||    
T  11836 ttatactgcatgaatcggt 11818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 111563 - 111741
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||||||||||||    
T  111563 agattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttat 111661  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111662 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 7 - 218
Target Start/End: Original strand, 50055 - 50265
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| ||| |||||||||||||||||    
T  50055 aagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattta 50154  T
Q  107 ttttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagaca 206  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50155 ttttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcataaaattagaca 50253  T
Q  207 gcaagaatcggt 218  Q
    ||||| ||||||    
T  50254 gcaaggatcggt 50265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 7 - 218
Target Start/End: Original strand, 1054 - 1264
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| ||| |||||||||||||||||    
T  1054 aagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattta 1153  T
Q  107 ttttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagaca 206  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  1154 ttttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaaaaataagaca 1252  T
Q  207 gcaagaatcggt 218  Q
    ||||| ||||||    
T  1253 gcaaggatcggt 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 29614332 - 29614115
Alignment:
Q  1 acaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctc 100  Q
    ||||||||||||||||||||||||| ||||||  || ||||||||||||||||||||||||| |||||||||||| |||||||| ||| |||||||||||    
T  29614332 acaacaaagattaagttttcattctaaacattcaat-acaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctc 29614234  T
Q  101 aatttatttt-ccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614233 aatttatttttccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 29614134  T
Q  200 ttagacagcaagaatcggt 218  Q
    |||||||||||||||||||    
T  29614133 ttagacagcaagaatcggt 29614115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 2 - 199
Target Start/End: Original strand, 23057809 - 23058006
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  23057809 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctca 23057908  T
Q  102 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||    
T  23057909 atttatcttccaaaactatgcaattaggtcaattttcaggaattatagattatgattatcgagagatagtctcacccttaccttaatttagaagaaaa 23058006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 18800314 - 18800503
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatt-ta 106  Q
    |||||||| ||||||| ||||||| | ||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||| ||    
T  18800314 agattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattcta 18800412  T
Q  107 ttttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18800413 ttttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaa 18800503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 23839075 - 23839253
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| |||| ||||| |||||||||| ||| ||||||||||||||||||    
T  23839075 agattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttat 23839173  T
Q  108 tttccaaa-actatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
     ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23839174 cttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 10986359 - 10986169
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||||||||||||    
T  10986359 agattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttat 10986261  T
Q  108 tttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
     |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  10986260 cttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaaa 10986169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 52 - 218
Target Start/End: Complemental strand, 930229 - 930064
Alignment:
Q  52 atgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagat 151  Q
    ||||||||||| |||| |||||||||| ||||| ||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  152 tatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaaaataagacagcaaggatcggt 930064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 4477734 - 4477912
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||| ||||||||||| ||| ||||||||| ||||||||    
T  4477734 agattaagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttat 4477832  T
Q  108 tttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477833 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 12168244 - 12168447
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  12168244 gattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttatt 12168340  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12168341 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 12168439  T
Q  209 aagaatcg 216  Q
    ||| ||||    
T  12168440 aaggatcg 12168447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 216
Target Start/End: Complemental strand, 19786043 - 19785840
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  ||| ||||||    
T  19786043 gattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcattttatt 19785947  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19785946 ttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 19785848  T
Q  209 aagaatcg 216  Q
    ||| ||||    
T  19785847 aaggatcg 19785840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 19878337 - 19878540
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  19878337 gattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttatt 19878433  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19878434 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 19878532  T
Q  209 aagaatcg 216  Q
    ||| ||||    
T  19878533 aaggatcg 19878540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 19287153 - 19287356
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  19287153 gattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttatt 19287249  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19287250 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacaac 19287348  T
Q  209 aagaatcg 216  Q
    ||| ||||    
T  19287349 aaggatcg 19287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 19884113 - 19884316
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  19884113 gattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttatt 19884209  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19884210 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccctaaccttagttttgcagaaaattagacagc 19884308  T
Q  209 aagaatcg 216  Q
    ||| ||||    
T  19884309 aaggatcg 19884316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 34640162 - 34639986
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||||||||||||| ||| ||| |||   ||| || |||||| ||| |||||||||  || |||||| ||||| ||| ||||||   ||   |||||    
T  34640162 gattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaattttcttattatt 34640065  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34640064 ttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 34646836 - 34646660
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||||||||||||| ||| ||| |||   ||| || |||||| ||| |||||||||  || |||||| ||||| ||| ||||||   ||   |||||    
T  34646836 gattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaattttcttattatt 34646739  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34646738 ttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 21565390 - 21565214
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||| | | ||||||| | |||||||||||||||||| |||| ||||| |||||||||| ||| ||||||||||||||||      
T  21565390 agattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaatttta 21565292  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 184  Q
    |   |||   || |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  21565291 tcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 25469785 - 25469704
Alignment:
Q  104 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25469785 ttattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 24512899 - 24512832
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaa 24512832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 31252406 - 31252478
Alignment:
Q  115 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||| ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||    
T  31252406 aactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 11288758 - 11288668
Alignment:
Q  98 ctcaatttattttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||||||||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  11288758 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 11288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  152 tatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  152 tatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 15458492 - 15458545
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 15465087 - 15465140
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  159 attgagagatagtctcacccttaccttag 187  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 29415591 - 29415551
Alignment:
Q  152 tatgattattgagagatagtctcacccttaccttagttttg 192  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  29415591 tatgattattgagagttagcctcactcttaccttagttttg 29415551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 2 - 199
Target Start/End: Original strand, 15168046 - 15168243
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  15168046 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctca 15168145  T
Q  102 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||    
T  15168146 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttaatttagaagaaaa 15168243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 18873231 - 18873420
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  18873231 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctca 18873330  T
Q  102 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 191  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18873331 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 12710023 - 12709813
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaag-agaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattt 105  Q
    ||||||||||||  |||||||||||||||||||||  |||||||||||||||||||| |||||| ||||| |||||||| ||| ||||||||||||||||    
T  12710023 aagattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt 12709924  T
Q  106 attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 205  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12709923 attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagac 12709826  T
Q  206 agcaagaatcggt 218  Q
    |||||||||||||    
T  12709825 agcaagaatcggt 12709813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 13123094 - 13122884
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaag-agaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattt 105  Q
    ||||||||||||  |||||||||||||||||||||  |||||||||||||||||||| |||||| ||||| |||||||| ||| ||||||||||||||||    
T  13123094 aagattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt 13122995  T
Q  106 attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 205  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13122994 attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagac 13122897  T
Q  206 agcaagaatcggt 218  Q
    |||||| ||||||    
T  13122896 agcaaggatcggt 13122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 218
Target Start/End: Original strand, 13743581 - 13743794
Alignment:
Q  3 aacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaa 102  Q
    |||| ||||||||| |||| ||||||||  ||| ||||||| |||||||||||||||||| |||||| ||||| |||||||| ||| |||||||||||||    
T  13743581 aacatagattaagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaa 13743680  T
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaatta 202  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13743681 tttattttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaatta 13743778  T
Q  203 gacagcaagaatcggt 218  Q
    ||||||||| ||||||    
T  13743779 gacagcaaggatcggt 13743794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 182
Target Start/End: Complemental strand, 10895975 - 10895795
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||| ||    
T  10895975 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccaca 10895877  T
Q  102 atttattttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttac 182  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10895876 atttatcttccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 190
Target Start/End: Original strand, 14422861 - 14423043
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||||||||||||    
T  14422861 agattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttat 14422959  T
Q  108 tttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 190  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422960 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 16009454 - 16009631
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||| |||| ||||||||||| ||| || |||||| ||||||||    
T  16009454 agattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttat 16009552  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16009553 cttccaaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 216
Target Start/End: Complemental strand, 12590818 - 12590614
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| ||||||||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  12590818 gattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatattatt 12590721  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12590720 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacaac 12590622  T
Q  209 aagaatcg 216  Q
    ||| ||||    
T  12590621 aaggatcg 12590614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 13007313 - 13007516
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  13007313 gattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttatt 13007409  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13007410 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacaac 13007508  T
Q  209 aagaatcg 216  Q
    ||| ||||    
T  13007509 aaggatcg 13007516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 16677180 - 16677348
Alignment:
Q  18 ttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattt-attttccaaaa 116  Q
    |||||||||||||| |  |||||| | | |||||||||||||||| |  | | | ||| |||||||| ||| |||||||||| ||||| || ||||||||    
T  16677180 ttcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaa 16677279  T
Q  117 -ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16677280 actatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 17651416 - 17651584
Alignment:
Q  18 ttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattt-attttccaaaa 116  Q
    |||||||||||||| |  |||||| | | |||||||||||||||| |  | | | ||| |||||||| ||| |||||||||| ||||| || ||||||||    
T  17651416 ttcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaa 17651515  T
Q  117 -ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17651516 actatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 21231015 - 21230948
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaa 21230948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 20311107 - 20311038
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag--ttttgcagaaa 198  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaa 20311038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  123 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  151 ttatgattattgagagatagtctcacccttaccttagttttg 192  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  151 ttatgattattgagagatagtctcacccttaccttagttttg 192  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  151 ttatgattattgagagatagtctcacccttaccttagttttg 192  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 29181164 - 29181109
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 148619 - 148685
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    |||||||||||||  ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaa 148685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 31155396 - 31155449
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 31155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 14129216 - 14129244
Alignment:
Q  171 tctcacccttaccttagttttgcagaaaa 199  Q
    |||||||||||||||||||||||||||||    
T  14129216 tctcacccttaccttagttttgcagaaaa 14129244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 14136062 - 14136090
Alignment:
Q  171 tctcacccttaccttagttttgcagaaaa 199  Q
    |||||||||||||||||||||||||||||    
T  14136062 tctcacccttaccttagttttgcagaaaa 14136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 14433034 - 14433062
Alignment:
Q  171 tctcacccttaccttagttttgcagaaaa 199  Q
    |||||||||||||||||||||||||||||    
T  14433034 tctcacccttaccttagttttgcagaaaa 14433062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 16091078 - 16091130
Alignment:
Q  135 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 5e-89; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 22751012 - 22751201
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  22751012 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctca 22751111  T
Q  102 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 191  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22751112 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 38144714 - 38144526
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||||||||||||    
T  38144714 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttat 38144616  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144615 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 38144526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 28370232 - 28370055
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  |||||| |||||||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||    
T  28370232 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttat 28370134  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370133 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 19512263 - 19512441
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  |||||| |||||||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||    
T  19512263 agattaagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttat 19512361  T
Q  108 tttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19512362 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 191
Target Start/End: Original strand, 23528511 - 23528690
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  23528511 gattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttatt 23528608  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 191  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23528609 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 18408027 - 18407944
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408027 tttattttcaagaacaattcaattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 22438803 - 22438735
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaaa 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaa 22438735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 23111283 - 23111200
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23111283 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 42961566 - 42961632
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaa 42961632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 20781744 - 20781799
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttag 20781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 187
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  158 tattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 34830086 - 34830149
Alignment:
Q  133 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    |||||||||||||||| ||||  |||||||| ||||| || ||||||||||||||  ||||||||    
T  34830086 attttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgcagaa 34830149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 5e-89; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 2 - 199
Target Start/End: Complemental strand, 14762942 - 14762745
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  14762942 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctca 14762843  T
Q  102 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||    
T  14762842 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttaatttagaagaaaa 14762745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 20247973 - 20247791
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca 101  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  20247973 caacaaagattaagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctca 20247874  T
Q  102 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247873 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 38310984 - 38310802
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  38310984 caacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctca 38310885  T
Q  102 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38310884 atttatcttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 24192832 - 24193009
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  24192832 agattaagttttcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 24192931  T
Q  108 tttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24192932 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 9534205 - 9534382
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||| | || ||||||||||| ||| ||||||||||||||||||    
T  9534205 agattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttat 9534303  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534304 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 23370684 - 23370505
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||| ||||||||    
T  23370684 agattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttat 23370586  T
Q  108 tttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23370585 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 216
Target Start/End: Complemental strand, 41455272 - 41455068
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||||||||  |||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| ||||||   |||   ||||    
T  41455272 gattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaatccctaattttcatcctatt 41455175  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  41455174 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagttagacaac 41455076  T
Q  209 aagaatcg 216  Q
    ||| ||||    
T  41455075 aaggatcg 41455068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 24934003 - 24933828
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||||||||  || |||||||||||| ||| ||||||   |||  |||||    
T  24934003 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttcatattatt 24933906  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24933905 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 16801635 - 16801457
Alignment:
Q  18 ttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattt-attttccaaaa 116  Q
    |||||||| ||||| | ||||||  | | |||||||||||||||| |  ||| | ||| |||||||| ||| |||||||| ||||||| || ||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  117 ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    ||| ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaa 16801457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 55499281 - 55499104
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||||| | ||||||| | |||||||||||||||||| || ||||| |||||||||||| ||| ||||||||||||||||      
T  55499281 agattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttta 55499183  T
Q  108 tttccaaaactatgcaattaggtcaatttt-cagaaattatagattat-gattattgagagatagtctcacccttacct 184  Q
    |   |||   || ||| ||||||||||||| | ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  55499182 tcctcaaggttaagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 17240596 - 17240513
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240596 tttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  125 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 10389517 - 10389443
Alignment:
Q  113 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10389517 aaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 10414606 - 10414532
Alignment:
Q  113 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10414606 aaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 10421276 - 10421202
Alignment:
Q  113 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10421276 aaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 14865846 - 14865901
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 14865901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  152 tatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  151 ttatgattattgagagatagtctcacccttaccttag 187  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 10833359 - 10833303
Alignment:
Q  136 ttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 192  Q
    ||||||| ||||| | |||||||| |||  | |||||||||||||||||||||||||    
T  10833359 ttcagaatttatacactatgattactgaatgttagtctcacccttaccttagttttg 10833303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 8046017 - 8045801
Alignment:
Q  1 acaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||  ||  ||| |||||||||||    
T  8046017 acaacaaggattaagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctc 8045918  T
Q  101 aatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaat 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8045917 aatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaaaat 8045819  T
Q  201 tagacagcaagaatcggt 218  Q
     |||||||||| ||||||    
T  8045818 aagacagcaaggatcggt 8045801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 11847977 - 11848200
Alignment:
Q  1 acaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctc 100  Q
    |||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||| | |||||||||| ||| ||| |||||||||||    
T  11847977 acaacaaagattaagttttcattctgaacattatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctc 11848076  T
Q  101 aatttattttc------caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgca 194  Q
    |||| |||||       ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848077 aattgattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 11848176  T
Q  195 gaaaattagacagcaagaatcggt 218  Q
    ||||||||||||||||||||||||    
T  11848177 gaaaattagacagcaagaatcggt 11848200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 53483584 - 53483760
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctca-atttat 107  Q
    ||||||||||||||||| ||| ||| |||   ||| || |||||| ||| |||||||||  || |||||||||||| ||| ||||||   ||| |||  |    
T  53483584 gattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttcatattatt 53483681  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53483682 tttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 15408139 - 15408206
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | ||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaa 15408206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 181  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  151 ttatgattattgagagatagtctcacccttaccttagttttg 192  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 16146885 - 16146830
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 27906266 - 27906321
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| |||||||| ||||| ||||| || |||||||| |||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  156 attattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  156 attattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 14912081 - 14912138
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttag 14912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 37837798 - 37837766
Alignment:
Q  166 gatagtctcacccttaccttagttttgcagaaa 198  Q
    ||||||||||||||||||||| |||||||||||    
T  37837798 gatagtctcacccttaccttaattttgcagaaa 37837766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 42596497 - 42596465
Alignment:
Q  166 gatagtctcacccttaccttagttttgcagaaa 198  Q
    ||||||||||||||||||||| |||||||||||    
T  42596497 gatagtctcacccttaccttaattttgcagaaa 42596465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 931 - 719
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattta 106  Q
    ||||||||||||| || ||||||||||||||||||||| |||| |||||||||||| |||||||||||| |||| ||| ||| |||||||||||||||||    
T  931 aagattaagtttttatcctgaacattatattacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattta 832  T
Q  107 ttttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 205  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  831 ttttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaataagac 732  T
Q  206 agcaagaatcggt 218  Q
    |||||| ||||||    
T  731 agcaaggatcggt 719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 218
Target Start/End: Original strand, 164 - 377
Alignment:
Q  3 aacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaa 102  Q
    |||| ||||||||| |||| ||||||||  ||| ||||||| |||||||||||||||||| |||| |||| ||||||||||| ||| |||||||||||||    
T  164 aacatagattaagtcttcaatctgaacaccataatacaagaaaattaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaa 262  T
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaatta 202  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  263 tttattttccaaaactatgcaattaggtcaattt-cagaaattatagattatggttattgagagatagtctcacccttaccttagttttgcagaaaatta 361  T
Q  203 gacagcaagaatcggt 218  Q
    ||||||||| ||||||    
T  362 gacagcaaggatcggt 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 218
Target Start/End: Original strand, 23866490 - 23866700
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaag-agaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattt 105  Q
    ||||||||||||  |||||||||||||||||||||  |||||||||||||||||||| |||||| ||||| |||||||| ||| ||||||||||||||||    
T  23866490 aagattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt 23866589  T
Q  106 attttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 205  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23866590 attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagac 23866687  T
Q  206 agcaagaatcggt 218  Q
    |||||| ||||||    
T  23866688 agcaaggatcggt 23866700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 44477500 - 44477678
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  |||||| |||||||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||    
T  44477500 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttat 44477598  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44477599 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 44492658 - 44492836
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  |||||| |||||||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||    
T  44492658 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttat 44492756  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492757 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 8727911 - 8727735
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| |||  |||| ||||||||||  ||| ||||||||||||||||||    
T  8727911 agattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccatacccct-cagaatcatcgtcaaaccctaaccctcaatttat 8727813  T
Q  108 tttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8727812 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 210
Target Start/End: Original strand, 17054472 - 17054668
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  17054472 gattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttatt 17054568  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  17054569 ttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttggttttgcag-aaattagacagc 17054666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 23482136 - 23482053
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23482136 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 27941032 - 27940841
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaat--tt 105  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||| || ||||| |||||||||||| ||| ||||||  | ||||  ||    
T  27941032 agattaaattttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaattcccaattctt 27940934  T
Q  106 attttccaa-aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    ||||| ||| ||| || | | |    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||    
T  27940933 atttttcaagaacaattctaatcaaacaattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaa 27940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 18614271 - 18614340
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttaccttaatttagaagaaaa 18614340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 14056619 - 14056552
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaa 14056552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 25111976 - 25112043
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| |||| |||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaa 25112043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 29643440 - 29643373
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||| ||| | ||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttaatttagaagaaaa 29643373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 44474722 - 44474690
Alignment:
Q  166 gatagtctcacccttaccttagttttgcagaaa 198  Q
    ||||||||||||||||||||| |||||||||||    
T  44474722 gatagtctcacccttaccttaattttgcagaaa 44474690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 26583715 - 26583913
Alignment:
Q  18 ttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaac 117  Q
    |||||||||||||| |  |||||| | | |||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  26583715 ttcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaac 26583813  T
Q  118 tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcgg 217  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26583814 tatgcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaaggatcgg 26583912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 6483595 - 6483772
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  |||||| |||||||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||    
T  6483595 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttat 6483693  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483694 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 6487062 - 6487239
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  |||||| |||||||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||    
T  6487062 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttat 6487160  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487161 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 19661631 - 19661441
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||||||||||||    
T  19661631 agattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttat 19661533  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| | ||||||    
T  19661532 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttaatttagaagaaaa 19661441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 23878885 - 23879060
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||| ||||||||||||||| | ||||||| | |||||||||||||||||| |  ||||| |||||||||||| ||| |||||||||||||||||     
T  23878885 agattaagatttcattctgaacatcacattacaacataattaacatgatcattaccccattcccctcagaatcatcaacaa-ccctaaccctcaatttaa 23878983  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
    |   |||   || |||||||||||||||||  ||||||||| || || |||| ||||||||||||||||||||||||    
T  23878984 tcctcaaggttaagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 23089233 - 23089057
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||| | | ||||||| | |||||||||||||||||| |||| ||||| |||||||||| ||| ||||||||||||||||      
T  23089233 agattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaatttta 23089135  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 184  Q
    |   |||   || |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  23089134 tcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 23101641 - 23101463
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||| | | ||||||| | |||||||||||||||||| || ||||| |||||||||||| ||| ||||||||||||||||      
T  23101641 agattaagatttcattccgaacgtcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttta 23101543  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacctta 186  Q
    |   |||   ||  ||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||||    
T  23101542 tcctcaaggttaaacaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 5706160 - 5706023
Alignment:
Q  48 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaatta 146  Q
    |||||| ||| |||||||||  || |||||||||||| ||| ||||||   |||  ||||||| ||||| |||| ||||||||||||||| ||| |||||    
T  5706160 taacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaattt-caggaatta 5706064  T
Q  147 tagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  5706063 tagattatgattaatgagagatagtctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 23265114 - 23265197
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265114 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 23280182 - 23280265
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280182 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  125 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 26885148 - 26885246
Alignment:
Q  98 ctcaatttattttccaa-aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 196  Q
    |||||||| || ||||| |||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||||  |||||||    
T  26885148 ctcaattttttctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 23168351 - 23168287
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  |||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaa 23168287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 23579608 - 23579544
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  |||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaa 23579544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 2082 - 1867
Alignment:
Q  1 acaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctc 100  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||  || ||| |||||||| ||| |||||||||||    
T  2082 acaacaaggattaagttttcattatgaacattaaattacaagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctc 1985  T
Q  101 aatttattttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    || ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  1984 aaattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcag-aaa 1886  T
Q  200 ttagacagcaagaatcggt 218  Q
    |||||||||||| ||||||    
T  1885 ttagacagcaaggatcggt 1867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 8759 - 8544
Alignment:
Q  1 acaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctc 100  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||  || ||| |||||||| ||| |||||||||||    
T  8759 acaacaaggattaagttttcattttgaacattaaattacaagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctc 8662  T
Q  101 aatttattttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    || ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  8661 aaattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcag-aaa 8563  T
Q  200 ttagacagcaagaatcggt 218  Q
    |||||||||||| ||||||    
T  8562 ttagacagcaaggatcggt 8544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 11219 - 11407
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatt-tat 107  Q
    ||||||| ||||||| ||||||| | ||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||| |||    
T  11219 gattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctat 11317  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11318 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 14575 - 14398
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    ||||||||||||||||| |||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  14575 agattaagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 14476  T
Q  108 tttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14475 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 20437202 - 20437024
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||||| ||||||| | |||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||||||||||||    
T  20437202 agattaagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttat 20437104  T
Q  108 tttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20437103 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 41111916 - 41112119
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| |||| |||| ||||||| ||| ||||| || |||||   || |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  41111916 gattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttatt 41112012  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 208  Q
    || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41112013 tttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagc 41112111  T
Q  209 aagaatcg 216  Q
    ||| ||||    
T  41112112 aaggatcg 41112119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 32651563 - 32651640
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagaagaaaa 32651640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  156 attattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  156 attattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  152 tatgattattgagagatagtctcacccttacctt 185  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  152 tatgattattgagagatagtctcacccttacctt 185  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 11946472 - 11946504
Alignment:
Q  166 gatagtctcacccttaccttagttttgcagaaa 198  Q
    ||||||||||||||||||||| |||||||||||    
T  11946472 gatagtctcacccttaccttaattttgcagaaa 11946504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 21665177 - 21665205
Alignment:
Q  171 tctcacccttaccttagttttgcagaaaa 199  Q
    |||||||||||||||||||||||||||||    
T  21665177 tctcacccttaccttagttttgcagaaaa 21665205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 10374 - 10195
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||| ||||||||    
T  10374 agattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttat 10276  T
Q  108 tttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10275 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 1704 - 1525
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||| ||||||||    
T  1704 agattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttat 1606  T
Q  108 tttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1605 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 18038 - 18235
Alignment:
Q  1 acaacaaagattaagttttcattctgaacattatattacaag-agaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccct 99  Q
    |||||| || |||||||||||||||| |||| | |||||||  ||||||||||||| |||||| |||||||| | ||||||||||  || || |||||||    
T  18038 acaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattac-catttcccgttagaatcatcattaaaccttaaccct 18136  T
Q  100 caatttattttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    ||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18137 caatttattttcctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 18235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 30743 - 30923
Alignment:
Q  18 ttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattt-attttccaaaa 116  Q
    ||||||||| |||| |  |||||| | | ||||||||||| |||| |  ||||| ||| |||||||| ||| |||||| ||||||||| |  ||||||||    
T  30743 ttcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaa 30842  T
Q  117 ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30843 ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 30923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 1907 - 1727
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  1907 gattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaactttcatattatt 1810  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 192  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1809 ttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 5930 - 5750
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatt 108  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||||||||  || |||||||||||| ||| |||||||  |||  |||||    
T  5930 gattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaactttcatattatt 5833  T
Q  109 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 192  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5832 ttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 3e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 904 - 991
Alignment:
Q  104 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 191  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  104 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 191  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 859 - 899
Alignment:
Q  1 acaacaaagattaagttttcattctgaacattatattacaa 41  Q
    |||||| |||||||||||||||||||||||| | |||||||    
T  859 acaacacagattaagttttcattctgaacatcacattacaa 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8004 - 8044
Alignment:
Q  1 acaacaaagattaagttttcattctgaacattatattacaa 41  Q
    |||||| |||||||||||||||||||||||| | |||||||    
T  8004 acaacacagattaagttttcattctgaacatcacattacaa 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 3472 - 3295
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatga-tcattactcatttcccttcagaatcatcaccaagccctaaccctcaattta 106  Q
    |||||||| ||||||||||||||| | ||||||| | ||||||||||| ||||||| || ||||| |||||||||||| ||| ||||||||||||||||     
T  3472 agattaagatttcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttt 3374  T
Q  107 ttttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 184  Q
     |  ||||   || |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3373 atccccaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 45353 - 45268
Alignment:
Q  107 ttttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgc 193  Q
    ||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45353 ttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 3800 - 3624
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||||| | ||||||| | |||||||||||||||||| || | ||| |||||||||||| ||| ||||||||||||||||      
T  3800 agattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaatttta 3702  T
Q  108 tttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 184  Q
    |   |||   || |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3701 tcctcaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 116868 - 116964
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  116868 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagaagaaaa 116964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  152 tatgattattgagagatagtctcacccttacctt 185  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 16792 - 16875
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16792 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 40587 - 40520
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaa 40520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 17643 - 17711
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaaa 198  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaa 17711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 91 - 8
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  91 tttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 13604 - 13687
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13604 tttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 102011 - 101928
Alignment:
Q  103 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||| | ||| || ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  102011 tttattttcaagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0019 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 135473 - 135540
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaa 135540  T

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Target: scaffold2054 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 218
Target Start/End: Original strand, 680 - 800
Alignment:
Q  98 ctcaatttattttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 196  Q
    |||||||||||||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||||||||||     
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcag- 778  T
Q  197 aaattagacagcaagaatcggt 218  Q
    |||| |||||||||| ||||||    
T  779 aaataagacagcaaggatcggt 800  T

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Target: scaffold0235 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 22646 - 22581
Alignment:
Q  133 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| | ||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaa 22581  T

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Target: scaffold0815 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 1453 - 1516
Alignment:
Q  135 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||||| |||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaaa 1516  T

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Target: scaffold0124 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 35495 - 35438
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttag 35438  T

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Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

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Target: scaffold0317 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  123 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold0139 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

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Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  115 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 196  Q
    |||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 5929 - 5857
Alignment:
Q  115 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||| ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  5929 aactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

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Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 190  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 5480 - 5519
Alignment:
Q  158 tattgagagatagtctcacccttaccttagttttgcagaa 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttgcagaa 5519  T

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Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

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Target: scaffold1318 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 23624 - 23558
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 198  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||  |||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaaa 23558  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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Target: scaffold0249 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 13969 - 13894
Alignment:
Q  113 aaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||||| ||||||| | |||||| ||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  13969 aaaactattcaattagattaatttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 79545 - 79490
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  140 gaaattatagattatgattattgagagatagtctcacccttacctt 185  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 69749 - 69814
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 199  Q
    |||||| |||||||| |||| ||| ||||| || ||||||||||||||||||| ||| | ||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttaccttaatttagaagaaaa 69814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 529 - 561
Alignment:
Q  166 gatagtctcacccttaccttagttttgcagaaa 198  Q
    ||||||||||||||||||||| |||||||||||    
T  529 gatagtctcacccttaccttaattttgcagaaa 561  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 732 - 788
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 10622 - 10550
Alignment:
Q  115 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 187  Q
    |||||| | ||||| | ||||||||||||||||| |||| ||| ||||| ||||| || ||| ||||||||||    
T  10622 aactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  137 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 186  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 73285 - 73337
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 184  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73285 aattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 186  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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