View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0653_high_16 (Length: 282)
Name: NF0653_high_16
Description: NF0653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0653_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 32667089 - 32667354
Alignment:
| Q |
1 |
aagctagagagcttgttagcatcaataataaggcgataccgtagacgtggcgccggccttttaggtctccgaggcgtccgaataggagctgaccgaaggc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32667089 |
aagctagagagcttgttagcatcaataataaggcgataccgtagacgtggcgccggccttttaggtctccgaggcgtccgaataggagctgaccgaaggc |
32667188 |
T |
|
| Q |
101 |
ggttcctaggagtgcgacggagacaagagctgagaccacgaccgggttgacttgacggatttcttggtggtcagagtagtatattcttcctagcatcttt |
200 |
Q |
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||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
32667189 |
ggttcctaggagtgcaacggagacaagggctgagaccacgaccgggttgacttgacggatttcttggtggtcggagtagtatattcttcctagcatcttt |
32667288 |
T |
|
| Q |
201 |
gtgatgagtgtgatggagaagaggtcataagagtcagtgaaaagtcccattcctgctatgatgatg |
266 |
Q |
| |
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||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32667289 |
gtgatgagtgtgatggaaaaaaggtcataagagtcagtgaaaagtcccattcctgctatgatgatg |
32667354 |
T |
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