View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0653_low_62 (Length: 221)
Name: NF0653_low_62
Description: NF0653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0653_low_62 |
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Alignment Details
Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 46901452 - 46901305
Alignment:
| Q |
1 |
aggagtagcagtagcatcaggattattcctcatctcagcactagccaccccagcagcatcttgccttgtcgccgccttatcagctggcagcttcgctgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46901452 |
aggagtagcagtagcatcaggattattcctcatctcagcactagccaccccagcagcatcttgccttgtcgccgccttatcagctggcagcttcgctgtt |
46901353 |
T |
|
| Q |
101 |
gctccggtcagaacatctcccatcttaatcttctcctcctcacgttga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
46901352 |
gctccggtcagaacatctcccatcttaatcttctcctcctcacgttga |
46901305 |
T |
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