View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0654_high_3 (Length: 251)

Name: NF0654_high_3
Description: NF0654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0654_high_3
NF0654_high_3
[»] chr2 (32 HSPs)
chr2 (26-239)||(14510420-14510633)
chr2 (26-143)||(7983702-7983818)
chr2 (28-152)||(14509203-14509327)
chr2 (28-151)||(25570869-25570992)
chr2 (30-136)||(3533640-3533746)
chr2 (29-110)||(15850107-15850188)
chr2 (27-151)||(15850658-15850782)
chr2 (92-151)||(23177732-23177791)
chr2 (92-151)||(23588989-23589048)
chr2 (92-152)||(1624974-1625034)
chr2 (29-109)||(7982307-7982387)
chr2 (47-150)||(7036979-7037082)
chr2 (28-130)||(25569763-25569865)
chr2 (92-151)||(2581861-2581920)
chr2 (92-151)||(6706984-6707043)
chr2 (52-151)||(7490194-7490293)
chr2 (92-151)||(12852944-12853003)
chr2 (47-150)||(32614398-32614501)
chr2 (172-239)||(42246748-42246815)
chr2 (52-146)||(3532212-3532306)
chr2 (82-152)||(35801043-35801113)
chr2 (82-150)||(10367287-10367355)
chr2 (82-150)||(12959705-12959773)
chr2 (47-151)||(28109868-28109972)
chr2 (52-151)||(4829483-4829582)
chr2 (52-151)||(35799530-35799629)
chr2 (92-131)||(42249801-42249840)
chr2 (29-87)||(8538688-8538746)
chr2 (166-236)||(33836921-33836991)
chr2 (93-151)||(40174763-40174821)
chr2 (54-111)||(20630710-20630767)
chr2 (95-151)||(42027254-42027310)
[»] chr8 (51 HSPs)
chr8 (28-239)||(8096456-8096667)
chr8 (29-151)||(8095342-8095463)
chr8 (52-149)||(41522689-41522786)
chr8 (52-137)||(20308623-20308708)
chr8 (52-137)||(21095256-21095341)
chr8 (52-151)||(13367049-13367148)
chr8 (52-145)||(2421298-2421391)
chr8 (27-121)||(22619888-22619982)
chr8 (29-121)||(22621163-22621255)
chr8 (82-149)||(24069447-24069514)
chr8 (92-151)||(31625383-31625442)
chr8 (92-151)||(37274945-37275004)
chr8 (31-137)||(45195817-45195922)
chr8 (30-111)||(9190481-9190561)
chr8 (26-111)||(16346091-16346176)
chr8 (52-120)||(34616147-34616215)
chr8 (47-147)||(38591010-38591110)
chr8 (28-111)||(4534028-4534111)
chr8 (92-151)||(36070236-36070295)
chr8 (29-130)||(34617215-34617316)
chr8 (52-137)||(39220697-39220782)
chr8 (47-151)||(24068343-24068447)
chr8 (47-151)||(31623919-31624023)
chr8 (47-111)||(35463028-35463092)
chr8 (28-132)||(43579674-43579778)
chr8 (47-150)||(29738304-29738407)
chr8 (47-142)||(35945445-35945540)
chr8 (92-151)||(41867915-41867974)
chr8 (92-151)||(43275808-43275867)
chr8 (160-211)||(43277841-43277892)
chr8 (92-151)||(45385793-45385852)
chr8 (82-151)||(7486125-7486194)
chr8 (27-76)||(31872878-31872927)
chr8 (82-151)||(37276242-37276311)
chr8 (52-137)||(38789068-38789153)
chr8 (47-151)||(1570205-1570309)
chr8 (47-111)||(35462680-35462744)
chr8 (95-151)||(35943969-35944025)
chr8 (92-152)||(36940031-36940091)
chr8 (28-111)||(12820137-12820220)
chr8 (92-151)||(16363811-16363870)
chr8 (92-151)||(19913550-19913609)
chr8 (47-150)||(19914906-19915009)
chr8 (29-132)||(24750049-24750152)
chr8 (165-211)||(38589970-38590016)
chr8 (30-111)||(9189390-9189471)
chr8 (47-151)||(37998-38102)
chr8 (92-128)||(7796829-7796865)
chr8 (103-151)||(8395064-8395112)
chr8 (29-109)||(12818749-12818829)
chr8 (147-239)||(36071268-36071360)
[»] chr3 (52 HSPs)
chr3 (31-239)||(12060656-12060863)
chr3 (28-235)||(23561041-23561247)
chr3 (29-236)||(48866136-48866363)
chr3 (30-151)||(23559815-23559936)
chr3 (29-137)||(21127920-21128028)
chr3 (31-137)||(12062397-12062503)
chr3 (29-137)||(35173142-35173250)
chr3 (83-151)||(47855337-47855405)
chr3 (28-130)||(43346467-43346569)
chr3 (92-151)||(32980451-32980510)
chr3 (29-111)||(50150716-50150798)
chr3 (29-110)||(7921683-7921764)
chr3 (82-151)||(54653965-54654034)
chr3 (28-151)||(43345313-43345436)
chr3 (27-110)||(48867470-48867553)
chr3 (27-109)||(1031809-1031891)
chr3 (92-150)||(11220658-11220716)
chr3 (46-152)||(25583126-25583232)
chr3 (27-109)||(53901562-53901644)
chr3 (52-137)||(35174395-35174480)
chr3 (52-151)||(8371238-8371337)
chr3 (92-151)||(29536772-29536831)
chr3 (92-151)||(42632764-42632823)
chr3 (82-152)||(47808104-47808174)
chr3 (27-111)||(2088835-2088919)
chr3 (47-143)||(54752629-54752725)
chr3 (92-151)||(11219488-11219547)
chr3 (96-151)||(25585832-25585887)
chr3 (92-151)||(47806876-47806934)
chr3 (47-150)||(49122002-49122105)
chr3 (168-239)||(49334229-49334300)
chr3 (30-111)||(4067922-4068003)
chr3 (29-130)||(51401371-51401472)
chr3 (82-151)||(51825620-51825689)
chr3 (95-151)||(26798905-26798961)
chr3 (26-106)||(32999789-32999869)
chr3 (27-111)||(39530788-39530872)
chr3 (47-111)||(39531855-39531919)
chr3 (47-151)||(41386143-41386247)
chr3 (28-111)||(33000839-33000922)
chr3 (28-107)||(45730631-45730710)
chr3 (92-151)||(48252991-48253050)
chr3 (101-151)||(2124096-2124146)
chr3 (101-151)||(29537141-29537191)
chr3 (93-151)||(42633885-42633943)
chr3 (92-150)||(43101952-43102010)
chr3 (171-236)||(39287606-39287671)
chr3 (48-137)||(49334350-49334439)
chr3 (92-152)||(10987651-10987711)
chr3 (95-151)||(41387432-41387488)
chr3 (111-151)||(47854564-47854604)
chr3 (92-140)||(48254899-48254946)
[»] chr6 (26 HSPs)
chr6 (31-235)||(14326150-14326354)
chr6 (31-235)||(14419160-14419364)
chr6 (24-151)||(14328773-14328899)
chr6 (24-151)||(14421783-14421909)
chr6 (47-151)||(8412315-8412419)
chr6 (52-152)||(8411104-8411204)
chr6 (47-150)||(31740272-31740375)
chr6 (27-120)||(13800024-13800117)
chr6 (148-239)||(16269509-16269600)
chr6 (92-151)||(22299902-22299961)
chr6 (95-152)||(27440173-27440230)
chr6 (47-143)||(5311292-5311388)
chr6 (47-115)||(33129294-33129362)
chr6 (29-111)||(1757533-1757615)
chr6 (25-151)||(31738354-31738480)
chr6 (28-105)||(1692068-1692145)
chr6 (26-111)||(27107173-27107258)
chr6 (26-111)||(27148979-27149064)
chr6 (83-152)||(27438839-27438908)
chr6 (52-152)||(33807707-33807807)
chr6 (92-150)||(293640-293698)
chr6 (47-152)||(9927619-9927723)
chr6 (52-97)||(16269821-16269866)
chr6 (195-239)||(17358979-17359023)
chr6 (28-132)||(26452251-26452355)
chr6 (166-239)||(28931003-28931078)
[»] scaffold0122 (2 HSPs)
scaffold0122 (28-187)||(17123-17282)
scaffold0122 (27-151)||(15943-16062)
[»] chr5 (51 HSPs)
chr5 (29-152)||(12830936-12831059)
chr5 (52-152)||(12862916-12863016)
chr5 (26-151)||(32734125-32734248)
chr5 (31-142)||(22819557-22819668)
chr5 (28-151)||(42510108-42510231)
chr5 (31-153)||(24761718-24761839)
chr5 (29-137)||(42511679-42511787)
chr5 (47-151)||(15857617-15857721)
chr5 (165-236)||(40059220-40059291)
chr5 (29-111)||(11907200-11907282)
chr5 (83-152)||(1663236-1663305)
chr5 (92-152)||(15613563-15613623)
chr5 (29-151)||(32735478-32735600)
chr5 (92-150)||(42979506-42979564)
chr5 (47-151)||(8188199-8188303)
chr5 (47-151)||(22812386-22812490)
chr5 (26-110)||(29221182-29221265)
chr5 (92-151)||(5384345-5384404)
chr5 (82-151)||(40058066-40058135)
chr5 (47-111)||(8284283-8284347)
chr5 (27-111)||(21011847-21011931)
chr5 (103-151)||(22819516-22819564)
chr5 (29-109)||(39135689-39135769)
chr5 (92-151)||(10085844-10085903)
chr5 (92-151)||(15614959-15615018)
chr5 (47-150)||(19525288-19525391)
chr5 (29-111)||(21006135-21006217)
chr5 (52-149)||(7426659-7426756)
chr5 (95-152)||(8762398-8762455)
chr5 (26-111)||(24070397-24070482)
chr5 (146-239)||(26911290-26911383)
chr5 (47-151)||(224589-224693)
chr5 (95-151)||(1273150-1273206)
chr5 (89-137)||(2167527-2167575)
chr5 (24-152)||(26403297-26403425)
chr5 (92-152)||(38473553-38473613)
chr5 (32-108)||(39134665-39134741)
chr5 (92-151)||(5383000-5383059)
chr5 (28-87)||(12861543-12861602)
chr5 (92-151)||(15509253-15509312)
chr5 (93-151)||(21389142-21389200)
chr5 (84-137)||(15856584-15856636)
chr5 (82-151)||(18695646-18695715)
chr5 (92-137)||(19827153-19827198)
chr5 (166-211)||(26403458-26403503)
chr5 (47-123)||(8187179-8187254)
chr5 (46-150)||(12936102-12936206)
chr5 (168-236)||(20988844-20988912)
chr5 (83-151)||(26404209-26404277)
chr5 (84-152)||(40059326-40059394)
chr5 (92-152)||(42980707-42980767)
[»] chr1 (60 HSPs)
chr1 (28-151)||(36511330-36511453)
chr1 (30-151)||(51726843-51726964)
chr1 (28-151)||(14765093-14765216)
chr1 (26-151)||(22167771-22167896)
chr1 (28-137)||(14169613-14169722)
chr1 (148-239)||(2971833-2971924)
chr1 (52-151)||(36509829-36509928)
chr1 (29-137)||(40812624-40812730)
chr1 (27-151)||(8092591-8092715)
chr1 (31-151)||(40811192-40811312)
chr1 (27-151)||(19466204-19466329)
chr1 (27-130)||(51725336-51725439)
chr1 (82-151)||(3979312-3979381)
chr1 (28-147)||(19464594-19464713)
chr1 (27-130)||(24516327-24516430)
chr1 (29-148)||(38283741-38283860)
chr1 (28-121)||(40110681-40110774)
chr1 (29-133)||(40109356-40109460)
chr1 (27-111)||(43807428-43807512)
chr1 (92-151)||(13641315-13641374)
chr1 (31-121)||(24517643-24517733)
chr1 (28-106)||(26803260-26803338)
chr1 (83-152)||(3978093-3978162)
chr1 (160-239)||(21278109-21278188)
chr1 (92-151)||(26056146-26056205)
chr1 (28-111)||(30743081-30743164)
chr1 (30-109)||(38280846-38280925)
chr1 (92-151)||(42248304-42248363)
chr1 (182-235)||(40812507-40812560)
chr1 (82-151)||(49141495-49141564)
chr1 (47-151)||(14764242-14764346)
chr1 (47-151)||(25787163-25787267)
chr1 (92-151)||(16217498-16217557)
chr1 (92-151)||(20953346-20953405)
chr1 (92-147)||(21277052-21277107)
chr1 (92-151)||(47136686-47136745)
chr1 (92-151)||(47411447-47411506)
chr1 (92-150)||(14071203-14071261)
chr1 (166-236)||(34531815-34531885)
chr1 (52-133)||(2973025-2973106)
chr1 (82-151)||(50679820-50679889)
chr1 (47-151)||(9633788-9633892)
chr1 (47-151)||(25785981-25786085)
chr1 (52-132)||(48332733-48332813)
chr1 (168-236)||(48935004-48935072)
chr1 (47-142)||(45570332-45570426)
chr1 (92-151)||(47411042-47411101)
chr1 (92-150)||(13930675-13930733)
chr1 (31-93)||(21246532-21246594)
chr1 (166-236)||(25889387-25889457)
chr1 (166-236)||(35684097-35684167)
chr1 (27-109)||(43808562-43808644)
chr1 (166-236)||(48973350-48973420)
chr1 (166-211)||(47411368-47411413)
chr1 (47-152)||(52181303-52181408)
chr1 (95-151)||(14390319-14390375)
chr1 (32-76)||(22169293-22169337)
chr1 (165-236)||(25786118-25786190)
chr1 (29-133)||(26801938-26802042)
chr1 (92-152)||(47560197-47560257)
[»] chr4 (67 HSPs)
chr4 (28-151)||(38417547-38417670)
chr4 (52-151)||(34438424-34438523)
chr4 (29-151)||(34439659-34439781)
chr4 (29-141)||(50531765-50531877)
chr4 (29-137)||(43419388-43419496)
chr4 (29-151)||(44159080-44159202)
chr4 (52-151)||(38419016-38419115)
chr4 (24-107)||(43418023-43418106)
chr4 (25-121)||(41348230-41348326)
chr4 (26-151)||(6138989-6139114)
chr4 (52-137)||(50530521-50530606)
chr4 (92-152)||(33376276-33376336)
chr4 (47-151)||(33377363-33377467)
chr4 (29-151)||(17319037-17319159)
chr4 (47-151)||(44128333-44128437)
chr4 (52-151)||(11113760-11113859)
chr4 (83-239)||(40146524-40146690)
chr4 (92-151)||(53400243-53400302)
chr4 (29-111)||(11482791-11482873)
chr4 (29-111)||(43708831-43708913)
chr4 (82-151)||(5687223-5687292)
chr4 (92-152)||(44304977-44305037)
chr4 (27-111)||(47572580-47572663)
chr4 (28-111)||(50496989-50497072)
chr4 (97-151)||(26788585-26788639)
chr4 (47-152)||(39592287-39592392)
chr4 (28-121)||(41349554-41349647)
chr4 (24-109)||(43709915-43709999)
chr4 (22-111)||(47573683-47573772)
chr4 (92-137)||(56000345-56000390)
chr4 (47-151)||(11114979-11115083)
chr4 (92-152)||(15787500-15787560)
chr4 (82-150)||(28103486-28103554)
chr4 (47-131)||(48207736-48207820)
chr4 (92-151)||(1273432-1273491)
chr4 (92-151)||(11094584-11094643)
chr4 (92-151)||(15446669-15446728)
chr4 (28-111)||(26045126-26045209)
chr4 (92-151)||(46796025-46796084)
chr4 (79-149)||(3533609-3533679)
chr4 (83-137)||(26393140-26393194)
chr4 (95-137)||(29663703-29663745)
chr4 (166-236)||(29834327-29834397)
chr4 (167-236)||(526613-526682)
chr4 (28-85)||(44160475-44160532)
chr4 (47-151)||(37560298-37560402)
chr4 (47-151)||(38370295-38370399)
chr4 (95-151)||(55953851-55953907)
chr4 (92-151)||(5688636-5688695)
chr4 (161-236)||(23153156-23153231)
chr4 (92-147)||(27410686-27410740)
chr4 (47-150)||(52658924-52659027)
chr4 (160-211)||(55953772-55953823)
chr4 (97-151)||(86866-86920)
chr4 (97-151)||(6140359-6140413)
chr4 (47-137)||(27408776-27408866)
chr4 (166-236)||(29833523-29833593)
chr4 (170-236)||(30671959-30672025)
chr4 (47-109)||(47242965-47243027)
chr4 (160-236)||(4373522-4373599)
chr4 (95-152)||(15787013-15787070)
chr4 (82-151)||(30683026-30683095)
chr4 (92-137)||(48206218-48206263)
chr4 (166-239)||(48206311-48206384)
chr4 (47-111)||(5417317-5417381)
chr4 (99-151)||(35787861-35787913)
chr4 (47-151)||(47668596-47668700)
[»] scaffold0166 (1 HSPs)
scaffold0166 (31-153)||(4215-4336)
[»] chr7 (54 HSPs)
chr7 (27-141)||(4167444-4167558)
chr7 (28-141)||(10257397-10257508)
chr7 (26-151)||(35315221-35315346)
chr7 (47-151)||(22746319-22746423)
chr7 (148-239)||(33458443-33458534)
chr7 (27-137)||(10256116-10256226)
chr7 (47-133)||(132016-132102)
chr7 (29-151)||(27899213-27899335)
chr7 (47-152)||(22744759-22744864)
chr7 (92-151)||(19278411-19278470)
chr7 (28-111)||(47928469-47928552)
chr7 (26-111)||(40881083-40881168)
chr7 (47-152)||(43930332-43930437)
chr7 (82-151)||(46674933-46675002)
chr7 (47-151)||(22061794-22061898)
chr7 (82-150)||(46458713-46458781)
chr7 (27-111)||(47537079-47537163)
chr7 (92-151)||(7347219-7347278)
chr7 (46-153)||(40926516-40926623)
chr7 (92-151)||(43007648-43007707)
chr7 (93-151)||(13446657-13446715)
chr7 (29-111)||(47927374-47927456)
chr7 (95-151)||(4857262-4857318)
chr7 (47-151)||(35484309-35484413)
chr7 (95-151)||(36702949-36703005)
chr7 (47-151)||(43006398-43006502)
chr7 (26-109)||(4168890-4168973)
chr7 (92-151)||(28326389-28326448)
chr7 (92-151)||(48672774-48672833)
chr7 (92-151)||(48754054-48754113)
chr7 (29-151)||(13286993-13287115)
chr7 (92-150)||(24873597-24873655)
chr7 (166-236)||(30223871-30223941)
chr7 (92-137)||(43935243-43935288)
chr7 (166-239)||(43936032-43936105)
chr7 (99-151)||(14206738-14206790)
chr7 (99-151)||(14215428-14215480)
chr7 (47-151)||(19279611-19279715)
chr7 (47-111)||(33071677-33071741)
chr7 (95-146)||(4858348-4858399)
chr7 (92-151)||(22060521-22060580)
chr7 (92-151)||(26406183-26406242)
chr7 (50-109)||(29409279-29409338)
chr7 (99-146)||(35128195-35128242)
chr7 (92-151)||(43936139-43936198)
chr7 (92-151)||(47163211-47163270)
chr7 (166-236)||(2903941-2904011)
chr7 (166-236)||(30222797-30222867)
chr7 (95-137)||(36702838-36702880)
chr7 (29-111)||(37781952-37782034)
chr7 (95-152)||(35127871-35127928)
chr7 (47-151)||(7148057-7148161)
chr7 (29-109)||(12631876-12631954)
chr7 (47-131)||(25153671-25153755)
[»] scaffold0098 (1 HSPs)
scaffold0098 (47-151)||(42345-42449)
[»] scaffold0041 (1 HSPs)
scaffold0041 (26-111)||(85115-85200)
[»] scaffold0003 (2 HSPs)
scaffold0003 (95-152)||(47131-47188)
scaffold0003 (83-152)||(48454-48523)
[»] scaffold1974 (1 HSPs)
scaffold1974 (47-151)||(627-731)
[»] scaffold1878 (1 HSPs)
scaffold1878 (47-151)||(543-647)
[»] scaffold0290 (1 HSPs)
scaffold0290 (47-151)||(9477-9581)
[»] scaffold0025 (1 HSPs)
scaffold0025 (92-132)||(56718-56758)
[»] scaffold2127 (1 HSPs)
scaffold2127 (92-151)||(514-573)
[»] scaffold0178 (2 HSPs)
scaffold0178 (92-151)||(2264-2323)
scaffold0178 (92-151)||(1269-1328)
[»] scaffold0009 (2 HSPs)
scaffold0009 (29-111)||(205591-205673)
scaffold0009 (27-75)||(204529-204577)
[»] scaffold0007 (1 HSPs)
scaffold0007 (95-152)||(145867-145924)
[»] scaffold0177 (1 HSPs)
scaffold0177 (166-236)||(1906-1976)
[»] scaffold0051 (1 HSPs)
scaffold0051 (95-152)||(22188-22245)
[»] scaffold0084 (1 HSPs)
scaffold0084 (47-151)||(11719-11823)
[»] scaffold0045 (1 HSPs)
scaffold0045 (52-152)||(77179-77279)


Alignment Details
Target: chr2 (Bit Score: 178; Significance: 4e-96; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 14510633 - 14510420
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgcc 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  14510633 taaggcttaatacataccccggtcctttaacttattttattttcttagtttagtcccttaactattaagtgtctcaatttggtcctataactcttctgcc 14510534  T
Q  126 gtttactattttagtcctctccgttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcac 225  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  14510533 gtttactattttagtcatcttcgttaaccccctgtctatgtgtcatttaagattgatgatcaatgactggatttagaaagcacacaaatatacaatgcac 14510434  T
Q  226 tcacaacatatgat 239  Q
    ||||||||||||||    
T  14510433 tcacaacatatgat 14510420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 7983818 - 7983702
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgcc 125  Q
    ||||||||||||||| ||| | ||| |||||||||||||||||||||||||| |  |||||| ||||||||| ||||||||||||||||| |||||| ||    
T  7983818 taaggcttaatacatccccga-tcccttaacttattttattttctcagtttaattccttaactattaagtgtgtcaatttggtcctataagtcttctacc 7983720  T
Q  126 gtttactattttagtcct 143  Q
    ||||||| ||||||||||    
T  7983719 gtttactgttttagtcct 7983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 14509203 - 14509327
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| | ||  ||| ||||||||||||||||||||| ||| ||| |||||| || |||||| | |||| ||||| |||| ||||||| |||    
T  14509203 aggcttaatacatcctccgatcccttaacttattttattttctcactttggtcccttaactataaagtgttttaattcggtcccataaatcttctgtcgt 14509302  T
Q  128 ttactattttagtcctctccgttaa 152  Q
    |||||||||| ||||||||||||||    
T  14509303 ttactattttggtcctctccgttaa 14509327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 25570992 - 25570869
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| |  | |||| ||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||| | | |||| |||||  || |    
T  25570992 aggcttaatacatccttcggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtttcaatttgattccataagtcttcctccat 25570893  T
Q  128 ttactattttagtcctctccgtta 151  Q
    |||||||||||||||| |||||||    
T  25570892 ttactattttagtcctttccgtta 25570869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 3533746 - 3533640
Alignment:
Q  30 gcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttt 129  Q
    ||||||||||| | || |||||||||||||||||||||| | ||||| ||| |||||| ||||||||| |||||||||||  |||| |||| || |||||    
T  3533746 gcttaatacattctccggtcctttaacttattttatttttttagtttggtcccttaactattaagtgtgtcaatttggtctcataaatcttttgtcgttt 3533647  T
Q  130 actattt 136  Q
    |||||||    
T  3533646 actattt 3533640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 15850107 - 15850188
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcc 110  Q
    |||||||| ||| |||| |||| ||||||||||||||||| ||||||| ||| |||||| || |||||||||||||||||||    
T  15850107 ggcttaatgcatcccccggtcccttaacttattttattttttcagtttggtctcttaactataaagtgtctcaatttggtcc 15850188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 15850782 - 15850658
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccg 126  Q
    |||||||||||||| |||| |||| ||||||||||||||||||| |||||  ||  ||||| || || ||| |||||||||||  ||||||||||||| |    
T  15850782 aaggcttaatacatcccccggtcccttaacttattttattttcttagtttgctcctttaactataaaatgtttcaatttggtctcataactcttctgctg 15850683  T
Q  127 tttactattttagtcctctccgtta 151  Q
    ||  ||||||| |||| || |||||    
T  15850682 ttacctattttggtccacttcgtta 15850658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 23177732 - 23177791
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||| |||||||||||||    
T  23177732 aagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgtta 23177791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 23588989 - 23589048
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||| |||||||||||||    
T  23588989 aagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgtta 23589048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 1625034 - 1624974
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||| ||| ||||||||||    
T  1625034 aagtgtctcaatttggtcctataaatcttatgccatttactattttggtcttctccgttaa 1624974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 7982307 - 7982387
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    ||||||||||||  |||  |||||||||||||||||||||||||||||  || |||||| || |||||| |||||||||||    
T  7982307 ggcttaatacatctcccgatcctttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaatttggtc 7982387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 7036979 - 7037082
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||||||||||||||||    | ||| ||||||| |||||| || |||||| |||||||||||| |||| ||||||||||||||| ||||| ||| | ||    
T  7036979 gtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtttaccattttggtcatttc 7037078  T
Q  147 cgtt 150  Q
    ||||    
T  7037079 cgtt 7037082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 25569763 - 25569865
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| |||  |||||||||||||||||||||| | ||||| ||| |||||| ||||  ||| |||||||||||  |||| |||||  ||||    
T  25569763 aggcttaatacatccccaggtcctttaacttattttatttttttagtttggtcccttaactattacttgtgtcaatttggtcacataagtcttcctccgt 25569862  T
Q  128 tta 130  Q
    |||    
T  25569863 tta 25569865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 2581861 - 2581920
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||||  |||||||||||| || |||||||||||||    
T  2581861 aagtgtctcaatttggtcccataaatcttacgccgtttactatcttggtcctctccgtta 2581920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 6706984 - 6707043
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||| | |||| |||||| |||||||||||||| |||| ||||||||    
T  6706984 aagtgtctcaatttggttccataaatcttcttccgtttactattttggtcccctccgtta 6707043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 7490293 - 7490194
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||||||||| |||  ||||  || || |||||||||||||||| |||| |||| |   |||||||||||| ||| | |||||||    
T  7490293 ttaacttattttattttctcagtttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgtta 7490194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 12852944 - 12853003
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||||||  ||||||||||||| ||| |||||||||    
T  12852944 aagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcatctccgtta 12853003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 32614398 - 32614501
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||| ||||||||||||| ||| ||| ||| | |||| || | |||| ||||||| || | ||||||||| || ||||||| ||||||||||||||    
T  32614398 gtcccttagcttattttattttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgtttaccattttagtcctctc 32614497  T
Q  147 cgtt 150  Q
    ||||    
T  32614498 cgtt 32614501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 42246748 - 42246815
Alignment:
Q  172 ttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    ||||||| ||||||||| || || ||||||||||| |||| |||||||| | ||||||||||||||||    
T  42246748 ttaagatggatgatcaagggttggatttagaaagcgcacatatatacaacgaactcacaacatatgat 42246815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 3532212 - 3532306
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| |||||||  || |||||  ||||||||| |||||||||||  |||| |||| || | ||||||||||||||| ||||    
T  3532212 ttaatttattttattttttcagtttgatcccttaattattaagtgtgtcaatttggtcacataagtcttttgtcatttactattttagtcatctc 3532306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 35801113 - 35801043
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||| || |||||| ||||||||||||  ||||||||||||| ||||| | ||| ||||||||||||||    
T  35801113 cttaactataaagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctctccgttaa 35801043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 10367287 - 10367355
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    |||||| || |||||||||||||| |||  |||| |||||||||||||||  |||||||| ||||||||    
T  10367287 cttaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttagtcgtctccgtt 10367355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 12959773 - 12959705
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    |||||| || |||||||||||||| |||| |||| |||||||||||||||  ||||  |||||||||||    
T  12959773 cttaacaataaagtgtctcaatttagtccgataaatcttctgccgtttacctttttgatcctctccgtt 12959705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 28109972 - 28109868
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || |||| |||||||||||||| |||||| |||||  |||||| ||||| ||||||||    
T  28109972 gtcccttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaatttggtcccataacttttctgtagtttaccattttggtcctctc 28109873  T
Q  147 cgtta 151  Q
    |||||    
T  28109872 cgtta 28109868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 4829483 - 4829582
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||   || ||| ||||||| |||||| || || |||||||||||| ||  |||| |||| || ||||||||||||| |||||||| ||||    
T  4829483 ttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtcctctctgtta 4829582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 35799530 - 35799629
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||   || ||| ||||||| | |||| || ||||||||||||||||||  |||||| |||| ||||||||   ||| |||||||||||||    
T  35799530 ttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataacttttcttccgtttacctctttggtcctctccgtta 35799629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 42249840 - 42249801
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttac 131  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  42249840 aagtgtctcaatttagtcctataactcttctaccgtttac 42249801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 8538746 - 8538688
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaac 87  Q
    ||||||||||||   || |||| ||||||||||||||||||||||||| ||| ||||||    
T  8538746 ggcttaatacatcaaccggtcccttaacttattttattttctcagtttggtctcttaac 8538688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 33836921 - 33836991
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||| ||||||| ||||  ||||  |||| |||||| |||||||||  ||||||||||||    
T  33836921 tgtcatttaagattggtgatcaagggctagatttgaaaagtacacaagtatacaatgggctcacaacatat 33836991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 40174821 - 40174763
Alignment:
Q  93 agtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||| |||||||||||| |||| |||||||  |||||||||||| ||| |||||||||    
T  40174821 agtgtttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgtta 40174763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 20630767 - 20630710
Alignment:
Q  54 aacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||| |||||||||||| || |||||| |||||  || |||||||||||||    
T  20630767 aacttattttaatttctcagtttaatcccttaactattaaacgtttcaatttggtcct 20630710  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 42027254 - 42027310
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||| |||| | |||||| |||||||| ||| ||||| |||||||    
T  42027254 tgtctcaatttggtcccataaattttctgctgtttactactttggtcctttccgtta 42027310  T

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Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 28 - 239
Target Start/End: Complemental strand, 8096667 - 8096456
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||| |||||| |||||| |||| |||||||||  ||||||||| | ||||    
T  8096667 aggcttaatacatcccctagtcccttaacttattttattttttcagtttagtctcttaactattaagcgtcttaatttggtctcataactcttttaccgt 8096568  T
Q  128 ttactattttagtcctctccgttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactc 227  Q
    |||||||||| ||||||||||| ||| || ||| ||  ||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||  ||||    
T  8096567 ttactattttggtcctctccgtcaactccatgttcacatgtcatttaagattggtgatcaatggctggatttagaaagcacgcaaatatacaataaactc 8096468  T
Q  228 acaacatatgat 239  Q
     ||||| |||||    
T  8096467 gcaacacatgat 8096456  T

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Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 8095342 - 8095463
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| || |||||| || ||||    
T  8095342 ggcttaatacat-ccccggtcccttaacttattttattttctcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtt 8095440  T
Q  129 tactattttagtcctctccgtta 151  Q
    ||||||||| ||||| |||||||    
T  8095441 tactattttggtcctttccgtta 8095463  T

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Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 41522786 - 41522689
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgt 149  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  41522786 ttaacttattttattttctcagtttaatcatttaactattaagtgtgtcaatttggtcctataagtcttctgccgtttactgttttagtcctttccgt 41522689  T

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Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 20308623 - 20308708
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||  |||||||||||| |||||||||||||    
T  20308623 ttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactatttt 20308708  T

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Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 21095256 - 21095341
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||  |||||||||||| |||||||||||||    
T  21095256 ttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactatttt 21095341  T

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Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 13367148 - 13367049
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||| ||| ||| ||| |||||| || |||||| | |||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  13367148 ttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgtta 13367049  T

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Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 145
Target Start/End: Complemental strand, 2421391 - 2421298
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctct 145  Q
    ||||||||||||| ||| ||||||||||| |||||  ||||||||| |||||||||||| | || |||||||||||||| |||||| |||||||    
T  2421391 ttaacttattttaatttatcagtttagtcccttaaatattaagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctct 2421298  T

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Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 22619888 - 22619982
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttc 121  Q
    |||||||||||||| || | |||| |||||||||||||||||||||||||  || ||||||  |||||||| |||||||||||| |||| |||||    
T  22619888 aaggcttaatacatcccacggtcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatcttc 22619982  T

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Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 22621255 - 22621163
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttc 121  Q
    |||||||||||| || | |||| |||||||||||||||||||||||||  || |||||| |||||||||  ||||||||||| |||| |||||    
T  22621255 ggcttaatacatccctcggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtggcaatttggtcccataagtcttc 22621163  T

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Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 24069514 - 24069447
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgt 149  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||    
T  24069514 cttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtcctttccgt 24069447  T

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Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 31625442 - 31625383
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  31625442 aagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 37274945 - 37275004
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||||    
T  37274945 aagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgtta 37275004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 45195922 - 45195817
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttta 130  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||| ||| |||||  || |||||||||||||| ||||  ||  ||||||||||||      
T  45195922 cttaatacat-ccccagtcccttaacttattttaatttctcagtttggtcccttaaatataaagtgtctcaatttagtccattatatcttctgccgttat 45195824  T
Q  131 ctatttt 137  Q
    |||||||    
T  45195823 ctatttt 45195817  T

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Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 9190561 - 9190481
Alignment:
Q  30 gcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||| |||| || | ||||||||||||| ||||||||||||||| |||||| ||||| ||| |||||||||||||    
T  9190561 gcttaatacat-ccccggttccttaacttattttaatttctcagtttagtcccttaactattaaatgtttcaatttggtcct 9190481  T

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Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 16346091 - 16346176
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||||||  | |||||| ||||||||||||| ||||||||||| ||| |||||| |||||  || |||||||||||||    
T  16346091 taaggcttaatacatctctcagtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcct 16346176  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 34616147 - 34616215
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactctt 120  Q
    |||||||||||||||||||||||||  || |||||| || ||||||||||||||||||| |||| ||||    
T  34616147 ttaacttattttattttctcagtttgatctcttaactataaagtgtctcaatttggtcccataaatctt 34616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 38591110 - 38591010
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||| |||| |||| |||||||||||||||| ||||||||    
T  38591110 gtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactattttggtcctctc 38591011  T
Q  147 c 147  Q
    |    
T  38591010 c 38591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 4534028 - 4534111
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||| || |||||| ||||||||||||| ||||||||||| |||  ||||  ||||| ||| |||||||||||||    
T  4534028 aggcttaatacatccctcagtcccttaacttattttaatttctcagtttggtcctttaaatattaaatgtttcaatttggtcct 4534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 36070236 - 36070295
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||| |||||| ||||||    
T  36070236 aagtgtctcaatttgatcccataaatcttctgccgtttactattttggtcctccccgtta 36070295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 34617316 - 34617215
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| |||| |||| ||||||| |||| ||||| ||||||  ||  ||||| ||||||||| ||||||| |||| ||| ||||||| |||||    
T  34617316 ggcttaatacattccccggtcccttaacttttttttttttcccagtttgatccattaactattaagtgtgtcaatttagtcccatagctcttcttccgtt 34617217  T
Q  129 ta 130  Q
    ||    
T  34617216 ta 34617215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 39220697 - 39220782
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    ||||||||||||| ||||||| ||| |||  ||||| ||||||||| |||||||| | |  ||| |||||||||||||||||||||    
T  39220697 ttaacttattttaatttctcattttggtctattaactattaagtgtttcaatttgattccttaagtcttctgccgtttactatttt 39220782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 24068343 - 24068447
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||| |||| |||||  |||||||||| ||| ||||||||    
T  24068343 gtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatttggtcctctc 24068442  T
Q  147 cgtta 151  Q
    |||||    
T  24068443 cgtta 24068447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 31623919 - 31624023
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || |||||| |||||||||||| |||| |||| || |||||| |||||||||||||||    
T  31623919 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtttattattttagtcctctc 31624018  T
Q  147 cgtta 151  Q
    |||||    
T  31624019 cgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 35463092 - 35463028
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||||||||||||||||||||  || |||||| || || |||||||| ||||||||    
T  35463092 gtcctttaacttattttattttctcagtttgatcccttaactataaaatgtctcaaattggtcct 35463028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 43579674 - 43579778
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||||| | ||||  |||||||||||| | |||||| || |||| |||||| ||||| ||| ||||||||||||| ||| |  ||| ||||    
T  43579674 aggcttaatacatacgcaagtctcttaacttattttttcttctcacttcagtcccttaactattaaatgtttcaatttggtcctgtaagtactcttccgt 43579773  T
Q  128 ttact 132  Q
    |||||    
T  43579774 ttact 43579778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 29738304 - 29738407
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||| ||| |||  ||||| || |||||||||||||| |||  |||| |||||||||||||||  |||| ||||||||    
T  29738304 gtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttggtcctctc 29738403  T
Q  147 cgtt 150  Q
    ||||    
T  29738404 cgtt 29738407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 35945540 - 35945445
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcc 142  Q
    |||| |||||||||||| | || ||| ||||||| |||||| || || ||||||| |||||||| |||  |||||||| |||||||||||| ||||    
T  35945540 gtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagtttactattttggtcc 35945445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 41867974 - 41867915
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| | || ||||||||  ||||||||||||||||||||    
T  41867974 aagtgtctcaatttggtcccataaattttatgccgttttttattttagtcctctccgtta 41867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 43275808 - 43275867
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||| |||| ||||||||| ||||||||| |||||| |||||| ||||||    
T  43275808 aagtgtctcaatttagtcccataactcttatgccgtttattattttggtcctcaccgtta 43275867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 43277892 - 43277841
Alignment:
Q  160 tccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacaca 211  Q
    ||||||| ||||||||||||||||||||| || |||||||| ||||||||||    
T  43277892 tccatgtttcatttaagattgatgatcaacggttgaatttaaaaagcacaca 43277841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 45385852 - 45385793
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| |||||||| |||||||| |||| || ||||||| |||||||||||||||||||    
T  45385852 aagtgtttcaatttgatcctataaatcttatgtcgtttaccattttagtcctctccgtta 45385793  T

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Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 7486125 - 7486194
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || |||||  |||||||||||| |||| |||| ||| |||||||||||| |||||||||||||    
T  7486125 cttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgtta 7486194  T

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Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 31872927 - 31872878
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagttt 76  Q
    ||||||||||||||  ||| |||||||||||||||||| |||||||||||    
T  31872927 aaggcttaatacatctcccggtcctttaacttattttaatttctcagttt 31872878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 37276311 - 37276242
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || ||||||||||||||||||| |||| |||| ||||||||| ||| || |||||||| ||||    
T  37276311 cttaactataaagtgtctcaatttggtcccataaatcttttgccgtttattatattggtcctctctgtta 37276242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 38789068 - 38789153
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    |||||||||||| |||| ||| ||||||| | |||| |||||  ||||||||||| |||||||| |||| ||| ||||| ||||||    
T  38789068 ttaacttattttcttttttcattttagtctcgtaacaattaaacgtctcaatttgatcctataaatcttatgcagtttattatttt 38789153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 1570309 - 1570205
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||||||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||   ||| | || |||||||||||||||| ||| ||||    
T  1570309 gtcctttaacttatttttcattttcaatttggtctcataactataaagtgtctcaatttggtctattaaattttatgccgtttactattttggtcatctc 1570210  T
Q  147 cgtta 151  Q
    |||||    
T  1570209 cgtta 1570205  T

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Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 35462680 - 35462744
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||||||||||||||||||||  || ||||||  | || |||||||| ||||||||    
T  35462680 gtcctttaacttattttattttctcagtttgatcccttaactgtaaaatgtctcaaattggtcct 35462744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 35943969 - 35944025
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||| |||| |||| ||| |||||||||||| ||| |||||||||    
T  35943969 tgtctcaatttggtcccataaatcttatgcagtttactattttggtcatctccgtta 35944025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 36940091 - 36940031
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||| ||||||||||   |||| ||||||||||||||||||||| ||| ||||||||||    
T  36940091 aagtgtttcaatttggtatcataaatcttctgccgtttactattttggtcatctccgttaa 36940031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 12820220 - 12820137
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||| |||| |||| | ||||||||||| ||||||||||  ||| |||||| |||||  || | |||||||||||    
T  12820220 aggcttaatacatcccccggtccctaaacttattttaatttctcagttcggtcccttaactattaaacgttttaatttggtcct 12820137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 16363870 - 16363811
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||| |||||||||| ||| |||| || ||||| |||||||||||| |||||||||||||    
T  16363870 aagtatctcaatttgatcccataaatcgtctgctgtttactattttggtcctctccgtta 16363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 19913550 - 19913609
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| |||||||||||| |||| |||||||| |||||  ||||| |||||||||||||    
T  19913550 aagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcctctccgtta 19913609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 19915009 - 19914906
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||||||||||||||||   || ||| ||| ||| |||||| || |||||||||||||||  || |||| |||||| |||||||| ||||| ||| | ||    
T  19915009 gtcctttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatcttctaccgtttaccattttggtcatatc 19914910  T
Q  147 cgtt 150  Q
    ||||    
T  19914909 cgtt 19914906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 24750152 - 24750049
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||| ||||| | ||||| |||||||||||| | |||||| || |||| ||||||  |||| ||| ||||||||||||| ||| |  ||| |||||    
T  24750152 ggcttaatgcatacgcaagtcccttaacttattttttcttctcacttcagtcccttaacttttaaatgtgtcaatttggtcctgtaagtactcttccgtt 24750053  T
Q  129 tact 132  Q
    ||||    
T  24750052 tact 24750049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 38589970 - 38590016
Alignment:
Q  165 gtgtcatttaagattgatgatcaatggctgaatttagaaagcacaca 211  Q
    |||||||||||||||| ||||||| || |||||||| ||||||||||    
T  38589970 gtgtcatttaagattggtgatcaacggttgaatttaaaaagcacaca 38590016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 9189390 - 9189471
Alignment:
Q  30 gcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||| | || |||| |||| |||||||| ||||||||| | ||| |||||| |||||  || |||||||||||||    
T  9189390 gcttaatacatcctccggtcccttaatttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtcct 9189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 37998 - 38102
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || | | ||||||| | |||| || |||||| | |||||||||  |||| |||||  |||||||||||| | ||||||||    
T  37998 gtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgtttactattgtggtcctctc 38097  T
Q  147 cgtta 151  Q
    |||||    
T  38098 cgtta 38102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 7796865 - 7796829
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    ||||||||||||||||||  |||||||||||||||||    
T  7796865 aagtgtctcaatttggtctcataactcttctgccgtt 7796829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 8395064 - 8395112
Alignment:
Q  103 tttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||| |||| |||||| |||||||| ||||| |||||||||||||    
T  8395064 tttggtcccataattcttcttccgtttaccattttggtcctctccgtta 8395112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 12818749 - 12818829
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    ||||||||| || | || |||| ||||||||||||| ||||||||||| ||| |||||| |||||   | |||||||||||    
T  12818749 ggcttaatatatccaccggtcccttaacttattttaatttctcagtttggtcccttaactattaaacatttcaatttggtc 12818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 36071360 - 36071268
Alignment:
Q  147 cgttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    |||||||||  | |||| |||| |||||| |||| ||||||| ||||| |||||||  || ||||||||||||||   |||||||||| ||||    
T  36071360 cgttaaccctttatccacgtgttatttaaaattggtgatcaagggctggatttagagggcgcacaaatatacaataacctcacaacatgtgat 36071268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 31 - 239
Target Start/End: Original strand, 12060656 - 12060863
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttta 130  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |  |||||| || |||||||||    
T  12060656 cttaatacat-ccccagtcccttaacttattttattttctcagtttagtctcttaactattaagtgtctcaatttggcctcataactattttgccgttta 12060754  T
Q  131 ctattttagtcctctccgttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcaca 230  Q
    ||||||| ||||||||| | |||  | | ||||  ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||| ||    
T  12060755 ctattttggtcctctccatcaacttcatatccacatgtcacttaagattggtgatcaatggctgaatttagaaagcacgcaaatatacaataaactcgca 12060854  T
Q  231 acatatgat 239  Q
    ||| |||||    
T  12060855 acagatgat 12060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 28 - 235
Target Start/End: Complemental strand, 23561247 - 23561041
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| ||||  ||| |||||||||||||||||||||||||  || |||||  ||||||||||| ||||||||||||||| ||||||| |||    
T  23561247 aggcttaatacatcccccgatcccttaacttattttattttctcagtttgatcccttaattattaagtgtcttaatttggtcctataattcttctgacgt 23561148  T
Q  128 ttactattttagtcctctccgttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactc 227  Q
    |||||||| | ||||| |||||||||||| ||||||  ||||||||||||||| ||||||||| |||||||||||||||| ||| ||||| |||| |||     
T  23561147 ttactattgt-gtcctttccgttaaccccttgtccacatgtcatttaagattggtgatcaatgactgaatttagaaagcatacagatatataatgaactt 23561049  T
Q  228 acaacata 235  Q
    ||||||||    
T  23561048 acaacata 23561041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 236
Target Start/End: Original strand, 48866136 - 48866363
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||||| || ||| ||||||||| ||||||||||||||||| |||||| |||||    
T  48866136 ggcttaatacataccccaatctcttaacttattttattttctcagtttagtccctgaactattaagtgtgtcaatttggtcctataagtcttcttccgtt 48866235  T
Q  129 tactattttagtcctctcc--------------------gttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcac 208  Q
    ||||| | | |||||||||                    ||||||||| ||| || ||||||||| |||||||||||||| | ||| ||||||||||| |    
T  48866236 tactaatatggtcctctccgttagtttttttcaaaaattgttaaccccttgttcacgtgtcattttagattgatgatcaaggactggatttagaaagcgc 48866335  T
Q  209 acaaatatacaatgcactcacaacatat 236  Q
    |||||||||||||| |||||||||||||    
T  48866336 acaaatatacaatggactcacaacatat 48866363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 23559815 - 23559936
Alignment:
Q  30 gcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttt 129  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||| ||| |||||  |||||||||||||||||| ||| |||| ||||||| |||||    
T  23559815 gcttaatacattccccggtcccttaacttattttattttctcagtttggtcccttaattattaagtgtctcaatttgatcccataattcttctgtcgttt 23559914  T
Q  130 actattttagtcctctccgtta 151  Q
    |||||||| |||||||||||||    
T  23559915 actattttggtcctctccgtta 23559936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 21127920 - 21128028
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    ||||||||||||| || | ||| ||||||||||||||||| |||||||  || |||||| ||||||||| |||||||||||| |||||||||||||||||    
T  21127920 ggcttaatacatatccgaatcccttaacttattttattttttcagtttgatctcttaactattaagtgtgtcaatttggtcccataactcttctgccgtt 21128019  T
Q  129 tactatttt 137  Q
    ||| |||||    
T  21128020 taccatttt 21128028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 12062503 - 12062397
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttta 130  Q
    |||||||||| | || |||| ||||||||||||||||| ||||||| ||| |||||| |||||||||||||||||||||| || |||||| ||| |||||    
T  12062503 cttaatacatcctccggtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgttta 12062404  T
Q  131 ctatttt 137  Q
    |||||||    
T  12062403 ctatttt 12062397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 35173142 - 35173250
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||  || |||||| ||||||| | |||||||||||  ||||||||| || ||||    
T  35173142 ggcttaatacatcccccagtcccttaacttattttattttctcaatttcatcccttaactattaagtatttcaatttggtctcataactcttttgtcgtt 35173241  T
Q  129 tactatttt 137  Q
    |||||||||    
T  35173242 tactatttt 35173250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 47855405 - 47855337
Alignment:
Q  83 ttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  47855405 ttaactataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcctctccgtta 47855337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 43346569 - 43346467
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| ||||  | | |||||||||||||||||||||||||  || |||||| ||||||||| |||||||||||  |||||||||||| |||    
T  43346569 aggcttaatacatcccccgataccttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtctcataactcttctgtcgt 43346470  T
Q  128 tta 130  Q
    |||    
T  43346469 tta 43346467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 32980510 - 32980451
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  32980510 aagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgtta 32980451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 50150716 - 50150798
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||| |||  |||| ||||||||||||| ||||||||||| |||||||||| ||||| ||| |||||||||||||    
T  50150716 ggcttaatacatccccgggtcccttaacttattttaatttctcagtttggtcacttaactattaaatgtttcaatttggtcct 50150798  T

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Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 7921764 - 7921683
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcc 110  Q
    |||||||||||| | || |||| |||||||||||| ||||||||||||  ||||||||| |||||||||||||| |||||||    
T  7921764 ggcttaatacatcctccggtcccttaacttattttgttttctcagtttgatcacttaactattaagtgtctcaaattggtcc 7921683  T

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Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 54654034 - 54653965
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || ||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||    
T  54654034 cttaactataaagtgtctcaatttggtcccataattcttctgtcgtttactattttggtcctctccgtta 54653965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 43345313 - 43345436
Alignment:
Q  28 aggcttaatacataccccag-tcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccg 126  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||||  ||| |||||| || || ||| |||||||||||| |||| ||||||  ||    
T  43345313 aggcttaatacat-ccccagatcccttaacttattttattttctcagttaggtcccttaactataaaatgtttcaatttggtcccataaatcttctctcg 43345411  T
Q  127 tttactattttagtcctctccgtta 151  Q
    ||||| ||||| ||  |||||||||    
T  43345412 tttaccattttggttttctccgtta 43345436  T

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Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 48867553 - 48867470
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcc 110  Q
    ||||||| |||||| | || |||| ||||||||||||||||||||| ||| ||| |||||| ||||||||| ||||||||||||    
T  48867553 aaggctttatacatcctccggtcccttaacttattttattttctcaatttggtcccttaactattaagtgtgtcaatttggtcc 48867470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 1031809 - 1031891
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    |||||||||||||| |||| |||| ||||||||||||| ||||||||| | ||| |||||| ||||| ||| |||||||||||    
T  1031809 aaggcttaatacatcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaatgtttcaatttggtc 1031891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 11220716 - 11220658
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||||||    
T  11220716 aagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcccctccgtt 11220658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 25583126 - 25583232
Alignment:
Q  46 agtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctct 145  Q
    ||||| ||||||||||||   || ||| ||| ||| | |||| |||||  ||||||||||||||| |||| ||||||||||||||||||||| |||||||    
T  25583126 agtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttactattttggtcctct 25583225  T
Q  146 ccgttaa 152  Q
    | |||||    
T  25583226 ctgttaa 25583232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 53901562 - 53901644
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    |||||||||||||||||||  ||| |||| |||||||| ||||||||||||||| |||||| ||||| ||| | |||||||||    
T  53901562 aaggcttaatacataccccgatcccttaatttattttaatttctcagtttagtcccttaactattaaatgttttaatttggtc 53901644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 35174480 - 35174395
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    ||||||||||||||||| ||| ||| ||| |||||| ||||||||| ||||  |||||| |||||||||||  |||||||||||||    
T  35174480 ttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactatttt 35174395  T

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Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 8371238 - 8371337
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||| | || ||| ||| ||| | |||| || || |||||||||||||| | |||| |||||||| |||||||||||| |||||||||||||    
T  8371238 ttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtttactattttggtcctctccgtta 8371337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 29536772 - 29536831
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||||||  ||||||||||||| |||||||||||||    
T  29536772 aagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcctctccgtta 29536831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 42632764 - 42632823
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||| ||| |||| |||| || |||||||||||||||||||||||||||    
T  42632764 aagtgtctcaatttgatcccataaatcttatgtcgtttactattttagtcctctccgtta 42632823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 47808174 - 47808104
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||| || ||||||||||||||||||  |||| ||||||| ||||| ||||||| ||||||||||||||    
T  47808174 cttaactataaagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcctctccgttaa 47808104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 2088835 - 2088919
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||||| |||| |||| |||| |||||||| ||||||||||  ||| |||||  ||||| ||| |||||||||||||    
T  2088835 aaggcttaatacatcccccggtcccttaatttattttaatttctcagttaggtcccttaattattaaatgtttcaatttggtcct 2088919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 54752629 - 54752725
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcct 143  Q
    |||| ||||||||||||   || ||| ||||||| | |||| || |||||||||||||||||||| ||  |||| |||||||||||||||| |||||    
T  54752629 gtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccgtttactattttggtcct 54752725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 11219488 - 11219547
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||  || | ||||||||||||||||||||| ||| |||||||||    
T  11219488 aagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctccgtta 11219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 25585887 - 25585832
Alignment:
Q  96 gtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||  |||| ||||||| ||||||||||||||||| |||||||||    
T  25585887 gtctcaatttggtctcataaatcttctgtcgtttactattttagtcatctccgtta 25585832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 47806876 - 47806934
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||| |||||||| |||||||| |||||| ||||| |||||||||||||    
T  47806876 aagtgtctcaatttgatcctataaatcttctgctgtttac-attttggtcctctccgtta 47806934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 49122105 - 49122002
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||||||||||||||||   || ||| ||| ||| |||||| || ||||||||||||||||||  |||| | ||||||||||||| ||||| ||| | ||    
T  49122105 gtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttctgccgtttaccattttggtcttttc 49122006  T
Q  147 cgtt 150  Q
    ||||    
T  49122005 cgtt 49122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 49334300 - 49334229
Alignment:
Q  168 tcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    |||||||| |||| ||||  ||||||| |||| || ||| ||||||||||||||| ||||||||||||||||    
T  49334300 tcatttaatattggtgattgatggctggatttggacagcgcacaaatatacaatgaactcacaacatatgat 49334229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 4067922 - 4068003
Alignment:
Q  30 gcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||| ||||| | | ||||||||||||| ||| |||||||| || |||||| ||||| ||| | |||||||||||    
T  4067922 gcttaatacatgccccaattccttaacttattttaatttatcagtttaatcccttaactattaaatgttttaatttggtcct 4068003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 51401472 - 51401371
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| | |  |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||| |||| ||||||||||||    
T  51401472 ggcttaatacatgctctggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtt 51401373  T
Q  129 ta 130  Q
    ||    
T  51401372 ta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 51825689 - 51825620
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || |||||| |||||||||||| |||| ||||||| ||||||||||||| ||| | |||||||    
T  51825689 cttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttactattttggtcatatccgtta 51825620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 26798961 - 26798905
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||| |||| |||||  |||||||| ||||| |||||||||||||    
T  26798961 tgtctcaatttggtcccataattcttcctccgtttaccattttggtcctctccgtta 26798905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 32999789 - 32999869
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttg 106  Q
    ||||||||||||||| ||||   || ||||||||||||| ||||||||||| ||| |||||| ||||| ||| | ||||||    
T  32999789 taaggcttaatacatcccccgaccccttaacttattttaatttctcagtttggtcccttaactattaaatgttttaatttg 32999869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 39530788 - 39530872
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||||| |||| |||| ||||||||||||| ||||||||| |  || |||||| |||||  || |||||||| ||||    
T  39530788 aaggcttaatacatcccccggtcccttaacttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttgatcct 39530872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 39531919 - 39531855
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||| ||||||||||||| |||||||||||| || |||||| || || ||| |||||||||||||    
T  39531919 gtcccttaacttattttaatttctcagtttaatcccttaactatgaaatgtttcaatttggtcct 39531855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 41386143 - 41386247
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||| | |||| ||||  | ||||||||||||| ||||||||    
T  41386143 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacgacgtttactattttggtcctctc 41386242  T
Q  147 cgtta 151  Q
    |||||    
T  41386243 cgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 33000922 - 33000839
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||||  ||| ||||  |||||||||||| |||||||||||  || |||||| |||||  || |||||||||||||    
T  33000922 aggcttaatacatttcccggtcccctaacttattttaatttctcagtttgatcccttaactattaaacgtttcaatttggtcct 33000839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 45730631 - 45730710
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttgg 107  Q
    |||||||||||||  ||  |||| ||||||||||||| ||||||||||| ||| |||||| |||||  || |||||||||    
T  45730631 aggcttaatacatctcctggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttgg 45730710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 48252991 - 48253050
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| |||||  |||||||||| | ||||| |||||||||    
T  48252991 aagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtcatctccgtta 48253050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 2124096 - 2124146
Alignment:
Q  101 aatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||| |||| |||| |||||||||||||||| ||| |||||||||    
T  2124096 aatttggtcccataaatcttatgccgtttactattttggtcatctccgtta 2124146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 29537191 - 29537141
Alignment:
Q  101 aatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||| |||| |||| ||||||||||||||| ||||| |||||||||||||    
T  29537191 aatttcgtcccataaatcttctgccgtttacaattttggtcctctccgtta 29537141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 42633943 - 42633885
Alignment:
Q  93 agtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||| |||| |||| || |||||| |||||| |||||||| ||||    
T  42633943 agtgtctcaatttggtcccataaatcttatgtcgtttattattttggtcctctctgtta 42633885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 43101952 - 43102010
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    ||||||||||||||||||| |||| ||||||| || ||||||||||  || ||||||||    
T  43101952 aagtgtctcaatttggtcccataattcttctgtcgcttactattttgatcatctccgtt 43102010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 39287606 - 39287671
Alignment:
Q  171 tttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    |||||||||| ||||||| ||||  ||||  |||| ||||||||||||||||  ||||||||||||    
T  39287606 tttaagattggtgatcaagggctagatttgaaaagtacacaaatatacaatgggctcacaacatat 39287671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 49334439 - 49334350
Alignment:
Q  48 tcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    |||||| ||||||||| | || ||| ||| |||  ||||| || || ||||||||| |||||| |||| |||||| ||||||||||||||    
T  49334439 tcctttgacttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtttactatttt 49334350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 10987711 - 10987651
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||||||||||||||||| |||| | || ||||||||  |||||| |||||||| |||||    
T  10987711 aagtgtctcaatttggtcccataaattttatgccgttttttattttggtcctctctgttaa 10987651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 41387488 - 41387432
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||| ||||  |||   |||||||||||||| |||||||||||||    
T  41387488 tgtctcaatttggtcccataaaccttacaccgtttactattttggtcctctccgtta 41387432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 47854564 - 47854604
Alignment:
Q  111 tataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||| |||||| |||||||||||||| |||||||||||||    
T  47854564 tataaatcttcttccgtttactattttggtcctctccgtta 47854604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 48254946 - 48254899
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagt 140  Q
    |||||||||| |||||||  |||||||||||||||||||| ||||||||    
T  48254946 aagtgtctca-tttggtcacataactcttctgccgtttaccattttagt 48254899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 235
Target Start/End: Original strand, 14326150 - 14326354
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttta 130  Q
    |||||||||| ||||  ||| |||||||||||||||||||||||||  || |||||  ||| || ||||||||||||||| |||| ||||||  ||||||    
T  14326150 cttaatacatcccccgatcccttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattcttctatcgttta 14326249  T
Q  131 ctattttagtcctctccgttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcaca 230  Q
    ||||| | ||||| |||||||||| | | ||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  14326250 ctattgtggtcctttccgttaacctcttatccacttgtcatttaagattggtgatcaatggctgaatttagaaagcgcacaaatatacaatgaactcaca 14326349  T
Q  231 acata 235  Q
    |||||    
T  14326350 acata 14326354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 235
Target Start/End: Original strand, 14419160 - 14419364
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttta 130  Q
    |||||||||| ||||  ||| |||||||||||||||||||||||||  || |||||  ||| || ||||||||||||||| |||| ||||||  ||||||    
T  14419160 cttaatacatcccccgatcccttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattcttctatcgttta 14419259  T
Q  131 ctattttagtcctctccgttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcaca 230  Q
    ||||| | ||||| |||||||||| | | ||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  14419260 ctattgtggtcctttccgttaacctcttatccacttgtcatttaagattggtgatcaatggctgaatttagaaagcgcacaaatatacaatgaactcaca 14419359  T
Q  231 acata 235  Q
    |||||    
T  14419360 acata 14419364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 14328899 - 14328773
Alignment:
Q  24 aataaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctg 123  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||  || |||||| ||||||||||| |||||||||  |||| |||| ||    
T  14328899 aataaggcttaatacat-ccccagtcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttg 14328801  T
Q  124 ccgtttactattttagtcctctccgtta 151  Q
     ||||||||||||| |||||||||||||    
T  14328800 tcgtttactattttggtcctctccgtta 14328773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 14421909 - 14421783
Alignment:
Q  24 aataaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctg 123  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||  || |||||| ||||||||||| |||||||||  |||| |||| ||    
T  14421909 aataaggcttaatacat-ccccagtcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttg 14421811  T
Q  124 ccgtttactattttagtcctctccgtta 151  Q
     ||||||||||||| |||||||||||||    
T  14421810 tcgtttactattttggtcctctccgtta 14421783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 8412419 - 8412315
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||| ||||||| | |||| || ||||||||||||||||||| |||| |||| |||||||||||||||| ||||||||    
T  8412419 gtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtcctctc 8412320  T
Q  147 cgtta 151  Q
    |||||    
T  8412319 cgtta 8412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 8411104 - 8411204
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||   || ||| ||||||| | |||| || |||||||||||||||||| ||||| |||| |||||||||||||||| |||||||||||||    
T  8411104 ttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgtttactattttggtcctctccgtta 8411203  T
Q  152 a 152  Q
    |    
T  8411204 a 8411204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 31740375 - 31740272
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    ||||||||||||||||| | || ||| ||| ||| |||||| || ||||||||||||||||||| |||| |||| |||||||||| ||||| ||||| ||    
T  31740375 gtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcctatc 31740276  T
Q  147 cgtt 150  Q
    ||||    
T  31740275 cgtt 31740272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 13800024 - 13800117
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactctt 120  Q
    |||||||||||||| ||   |||| ||||||||||||||||||||||||| ||| |||||| ||||| ||| |||||||||||| |||| ||||    
T  13800024 aaggcttaatacatccctaggtcccttaacttattttattttctcagtttggtcccttaactattaattgtgtcaatttggtcccataaatctt 13800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 16269600 - 16269509
Alignment:
Q  148 gttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    ||||||||| | |||| |||| ||||||||||| ||||||| || || ||||||||||| |||||| |||||||| || |||||||||||||    
T  16269600 gttaaccccttatccacgtgtaatttaagattggtgatcaagggttggatttagaaagcgcacaaacatacaatgaacgcacaacatatgat 16269509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 22299961 - 22299902
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||||||    
T  22299961 aagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtta 22299902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 27440230 - 27440173
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  27440230 tgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaa 27440173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 5311292 - 5311388
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcct 143  Q
    |||| ||||||||||||   || ||| ||||||| | |||| || |||||||||||||||||||||||| |||| || ||||||||||||| |||||    
T  5311292 gtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtttactattttggtcct 5311388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 33129294 - 33129362
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataa 115  Q
    ||||||||| |||||||| ||| ||||||||||| |||||| || |||||||||||||||||| |||||    
T  33129294 gtcctttaatttattttaatttttcagtttagtctcttaactataaagtgtctcaatttggtcttataa 33129362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 1757615 - 1757533
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||| | || |||| ||||||||||||| ||||||||||| ||| |||||| |||||  || |||||||||||||    
T  1757615 ggcttaatacatcctccggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcct 1757533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 31738354 - 31738480
Alignment:
Q  25 ataaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgc 124  Q
    |||||||||||||||| |    |||| ||||||||||||   || ||| ||| ||| | |||| || |||||| |||||||||||| |||| ||||||||    
T  31738354 ataaggcttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgc 31738453  T
Q  125 cgtttactattttagtcctctccgtta 151  Q
     |||||| ||||| |||||||||||||    
T  31738454 ggtttaccattttggtcctctccgtta 31738480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 1692068 - 1692145
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaattt 105  Q
    ||||||||||||| ||||||||| |||| |||||||| ||| ||||||| ||| |||||| ||||| ||| |||||||    
T  1692068 aggcttaatacatcccccagtcccttaatttattttaatttttcagtttggtctcttaactattaaatgtttcaattt 1692145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 27107173 - 27107258
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||||| ||||  ||| ||||||||||||| |||||||||||  ||| ||||| ||||| | | |||||||||||||    
T  27107173 taaggcttaatacattccccgatcccttaacttattttaatttctcagtttgatcaattaactattaaatatttcaatttggtcct 27107258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 27148979 - 27149064
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||||| ||||  ||| ||||||||||||| |||||||||||  ||| ||||| ||||| | | |||||||||||||    
T  27148979 taaggcttaatacattccccgatcccttaacttattttaatttctcagtttgatcaattaactattaaatatttcaatttggtcct 27149064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 27438839 - 27438908
Alignment:
Q  83 ttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||| || ||||||||||||||| ||| |||| | |||||||||||||| |||| ||| ||||||||||    
T  27438839 ttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtcatctccgttaa 27438908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 33807707 - 33807807
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||   || ||| ||| ||| |||||| || ||||||||||||||| | | |||| | |||||||||||||  |||| |||||||||||||    
T  33807707 ttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgccgtttaccgttttggtcctctccgtta 33807806  T
Q  152 a 152  Q
    |    
T  33807807 a 33807807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 293698 - 293640
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    |||||| |||||||||||  |||| ||||||| ||||||| ||||| ||||||||||||    
T  293698 aagtgtttcaatttggtctcataagtcttctgtcgtttaccattttggtcctctccgtt 293640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 9927619 - 9927723
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || | ||||| ||| | |||| || ||||||||||||||||||| ||||  ||||   ||||||||||||| ||| ||||    
T  9927619 gtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataa-acttcaatcgtttactattttggtcatctc 9927717  T
Q  147 cgttaa 152  Q
    ||||||    
T  9927718 cgttaa 9927723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 16269866 - 16269821
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgt 97  Q
    |||||||||||||||||||||||||  || |||||| |||||||||    
T  16269866 ttaacttattttattttctcagtttgatctcttaactattaagtgt 16269821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 17358979 - 17359023
Alignment:
Q  195 aatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    |||||| ||||||||||| ||||||||  ||||||||||||||||    
T  17358979 aatttaaaaagcacacaattatacaattgactcacaacatatgat 17359023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 26452355 - 26452251
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||| ||||| |  |||| |||||||||||| | |||||| || |||| ||||||  |||| ||| ||||||||||||| ||| |  ||| ||||    
T  26452355 aggcttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaaatgtgtcaatttggtcctgtaagtactcttccgt 26452256  T
Q  128 ttact 132  Q
    |||||    
T  26452255 ttact 26452251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 28931078 - 28931003
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagca--cacaaatatacaatgcactcacaacatatgat 239  Q
    ||||| ||||||||||||||||| || || ||||| ||||||  ||||||||||||||| ||| |||  |||||||    
T  28931078 tgtcacttaagattgatgatcaagggttggatttaaaaagcactcacaaatatacaatgaacttacagtatatgat 28931003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 17282 - 17123
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||||  ||| |||||||||||| | |    
T  17282 aggcttaatacataccccggtcctttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttaatccaataactcttctgtcat 17183  T
Q  128 ttactattttagtcctctccgttaaccccctgtccatgtgtcatttaagattgatgatca 187  Q
    |||||||||||||||||||  |||||||| |||| |||||||||||||||||| ||||||    
T  17182 ttactattttagtcctctctattaaccccatgtctatgtgtcatttaagattggtgatca 17123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 15943 - 16062
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccg 126  Q
    |||||||||||||| | || |||| ||||||||||||||||| ||| ||| ||| |||| | || |||| | |||||     || ||||  ||| |||||    
T  15943 aaggcttaatacatcctccggtcccttaacttattttattttttcactttggtcccttagctataaagtatttcaat-----cccataaaccttatgccg 16037  T
Q  127 tttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||||||||    
T  16038 tttactattttagtcctctccgtta 16062  T

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Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 12831059 - 12830936
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    ||||||||||||  | | |||| |||||||||||||||||||||||||  || |||||| |||||||||||||||||||||||||||||||||||| |||    
T  12831059 ggcttaatacatctctcggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtt 12830960  T
Q  129 tactattttagtcctctccgttaa 152  Q
    ||||||||| ||||||||||||||    
T  12830959 tactattttggtcctctccgttaa 12830936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 12863016 - 12862916
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||||||||  || |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  12863016 ttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgtta 12862917  T
Q  152 a 152  Q
    |    
T  12862916 a 12862916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 32734125 - 32734248
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgcc 125  Q
    ||||||||||||||| |||| |||||||||||||||||||||| ||||||| ||| |||||| |||| |||||| |||||||||| |||||||||||| |    
T  32734125 taaggcttaatacat-ccccggtcctttaacttattttattttttcagtttggtcccttaactatta-gtgtcttaatttggtcccataactcttctgtc 32734222  T
Q  126 gtttactattttagtcctctccgtta 151  Q
    |||||||||||| ||| | |||||||    
T  32734223 gtttactattttggtcatttccgtta 32734248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 22819668 - 22819557
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttta 130  Q
    ||||||||||  ||| | || ||||||||||||||||||||| |||  || |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  22819668 cttaatacatctcccggccccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttctgccgttta 22819569  T
Q  131 ctattttagtcc 142  Q
    ||||||| ||||    
T  22819568 ctattttggtcc 22819557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 42510108 - 42510231
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| |||   ||| |||| |||||||||||| ||||||| ||| |||||| || ||||||||||||||||||| |||| |||||||||||    
T  42510108 aggcttaatacatcccctgatcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgt 42510207  T
Q  128 ttactattttagtcctctccgtta 151  Q
    |||||||||| || ||||||||||    
T  42510208 ttactattttggttctctccgtta 42510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 24761839 - 24761718
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttta 130  Q
    |||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||  |||||||||||||||||| ||  ||||||| |||||||||||    
T  24761839 cttaatacat-ccctagtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaatttgatctcataactcgtctgccgttta 24761741  T
Q  131 ctattttagtcctctccgttaac 153  Q
    | |||||  ||||||||||||||    
T  24761740 ccattttgttcctctccgttaac 24761718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 42511787 - 42511679
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| ||| ||||| |||| |||||||||||| ||||||| ||| |||||| || ||||||||||||||| | | |||| ||||||||||||    
T  42511787 ggcttaatacattccctagtcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttgcttccataaatcttctgccgtt 42511688  T
Q  129 tactatttt 137  Q
    | |||||||    
T  42511687 tcctatttt 42511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 15857721 - 15857617
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||||||||||||||| ||| |||||| || |||||| |||||||| ||| |||| |||| || ||||||| ||||| ||| ||||    
T  15857721 gtcccttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctc 15857622  T
Q  147 cgtta 151  Q
    |||||    
T  15857621 cgtta 15857617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 40059291 - 40059220
Alignment:
Q  165 gtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||||||||||||  |||| ||||||||||| |||| |||||||||| |||||||||||||    
T  40059291 gtgtcatttaagattgatgatcaagagctggatttagaaagcgcacacatatacaatgaactcacaacatat 40059220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 11907282 - 11907200
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||| |||| |||| ||||||||||||| ||||||||||| ||| |||||| ||||| ||| |||||||||||||    
T  11907282 ggcttaatacatcccccggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcct 11907200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 1663236 - 1663305
Alignment:
Q  83 ttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||| || |||||||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  1663236 ttaactataaagtgtcttaatttggtcctataaatcttctgccgtttactattttggtcttctccgttaa 1663305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 15613563 - 15613623
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  15613563 aagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaa 15613623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 32735600 - 32735478
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| | ||  ||| ||||| ||||||||||||||| |||  || |||||  ||||| ||| | |||||||||| |||||||||||||||||    
T  32735600 ggcttaatacatcctccgatcccttaacatattttattttctcaatttgatcccttaattattaaatgttttaatttggtcccataactcttctgccgtt 32735501  T
Q  129 tactattttagtcctctccgtta 151  Q
    || |||||| ||| |||| ||||    
T  32735500 tattattttggtcatctctgtta 32735478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 42979506 - 42979564
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    |||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  42979506 aagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgtt 42979564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 8188303 - 8188199
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||||||| |||||||  ||  ||||| ||||||||| ||||||||||||||||| |||||  || |||||||   | ||||||||    
T  8188303 gtcccttaacttattttattttttcagtttgatcctttaactattaagtgtgtcaatttggtcctataagtcttcctccatttactaacgtggtcctctc 8188204  T
Q  147 cgtta 151  Q
    |||||    
T  8188203 cgtta 8188199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 22812490 - 22812386
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||| ||||||| |||||| || || ||||||| |||| ||| |||| |||||||| |||||||||||| |||| |||    
T  22812490 gtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttactattttggtcccctc 22812391  T
Q  147 cgtta 151  Q
    |||||    
T  22812390 cgtta 22812386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 29221182 - 29221265
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcc 110  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||  |||||| ||||||||| ||| ||| ||||    
T  29221182 taaggcttaatacatcccccagtcttttaacttattttaatttctcagtttggt-tcttaactattaagtgtttcagtttagtcc 29221265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 5384404 - 5384345
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| |||||  |||||||||||||| |||||||||||||    
T  5384404 aagtgtctcaatttggtcccataaatcttcgtccgtttactattttggtcctctccgtta 5384345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 40058066 - 40058135
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| ||||||||| |||| ||||||  |||||||||||||||||||| ||||| ||| |||||||||    
T  40058066 cttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgtta 40058135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 8284347 - 8284283
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||| ||||||||||||| ||||||||||||||| |||||| ||||| ||| | |||||||||||    
T  8284347 gtcccttaacttattttaatttctcagtttagtctcttaactattaaatgttttaatttggtcct 8284283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 21011931 - 21011847
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||||||| |  |||| |||||||||||| | |||||| || |||| |||||| ||||| ||| |||||||||||||    
T  21011931 aaggcttaatacatacgcaggtcccttaacttattttttcttctcacttcagtcccttaactattaaatgtttcaatttggtcct 21011847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 22819564 - 22819516
Alignment:
Q  103 tttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  22819564 tttggtcccataactcttctgccgtttactattttggtcatctccgtta 22819516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 39135769 - 39135689
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    ||||||||| || | || |||||||||||||||||| |||||||||||  || |||||| ||||| ||| |||||||||||    
T  39135769 ggcttaatagatcctccggtcctttaacttattttaatttctcagtttgctcccttaactattaaatgtttcaatttggtc 39135689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 10085903 - 10085844
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| |||||||||||| |||| ||||||||  ||||||||||| |||||||||||||    
T  10085903 aagtgtttcaatttggtcccataaatcttctgctatttactattttggtcctctccgtta 10085844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 15615018 - 15614959
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||| | |||| | ||||||||||||||||||| |||||||| ||||    
T  15615018 aagtgtctcaatttggttccataaattttctgccgtttactattttggtcctctctgtta 15614959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 19525391 - 19525288
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||| ||||||||  |||| ||||||||||||||| ||||| ||||||||    
T  19525391 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtttaccattttggtcctctc 19525292  T
Q  147 cgtt 150  Q
    ||||    
T  19525291 cgtt 19525288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 21006135 - 21006217
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||||| |  |||| |||||||||||| | |||||| ||||||| ||||||  |||| ||| |||||||||||||    
T  21006135 ggcttaatacatacgcaggtcccttaacttattttttcttctcactttagtcccttaacttttaaatgtgtcaatttggtcct 21006217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 7426659 - 7426756
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgt 149  Q
    |||| |||||||||||||| |||||| || |||||  ||||||||| ||||| |||| | |||| ||| ||||| |||||| ||||| |||| |||||    
T  7426659 ttaatttattttattttcttagtttaatcccttaattattaagtgtgtcaatatggttccataagtctactgccatttactgttttattcctttccgt 7426756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 8762455 - 8762398
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||||||||||||  |||| | || || ||||||||||||||||||||||||||||    
T  8762455 tgtctcaatttggtcacataaattttatgtcgtttactattttagtcctctccgttaa 8762398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 24070397 - 24070482
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||||| |||| |||| |||| |||||||| ||||||||| |  || |||||| |||||  || |||||||||||||    
T  24070397 taaggcttaatacatcccccggtcccttaatttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttggtcct 24070482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 26911290 - 26911383
Alignment:
Q  146 ccgttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    ||||||||||  | |||| |||||| |||||||  |||||||| || || ||||||||||| |||| ||||| |||| |||| |||||||||||    
T  26911290 ccgttaacccattatccacgtgtcacttaagatgaatgatcaagggttggatttagaaagcgcacatatatagaatgaactcgcaacatatgat 26911383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 224693 - 224589
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||||| || ||| ||| ||| | |||| || ||||||||||||||||||  |||| |||||  ||| |||||| | ||||| ||||    
T  224693 gtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtcttcctccgattactaatgtagtcatctc 224594  T
Q  147 cgtta 151  Q
    |||||    
T  224593 cgtta 224589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 1273150 - 1273206
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||| |||| |||||||| |||||| ||||| |||| ||||||||    
T  1273150 tgtctcaatttggtcccataaatcttctgcagtttacaattttggtcccctccgtta 1273206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 2167575 - 2167527
Alignment:
Q  89 attaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    ||||||||| |||||||||||| |||| |||||||||||||| ||||||    
T  2167575 attaagtgtttcaatttggtcccataaatcttctgccgtttattatttt 2167527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 26403297 - 26403425
Alignment:
Q  24 aataaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctg 123  Q
    |||||||||||||||||     ||||||||||||||||||   || ||| ||| ||| |||||| || ||||||||||||||| ||  |||| | || ||    
T  26403297 aataaggcttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatg 26403396  T
Q  124 ccgtttactattttagtcctctccgttaa 152  Q
     ||||||||||||| ||| |||| |||||    
T  26403397 tcgtttactattttggtcttctctgttaa 26403425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 38473613 - 38473553
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||||| |||||||||| |||| ||||||| ||||||||||||| ||| | ||||||||    
T  38473613 aagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgttaa 38473553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 39134665 - 39134741
Alignment:
Q  32 ttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggt 108  Q
    ||||||||| |||| |||| |||||||||||||  |||||||||| ||| |||||| |||||  || ||||||||||    
T  39134665 ttaatacatcccccggtcccttaacttattttaaattctcagtttggtcccttaactattaaacgtttcaatttggt 39134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 5383000 - 5383059
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||||  | |||||||||||||  ||||||||||||    
T  5383000 aagtgtctcaatttggtcccataaatctttggtcgtttactattttgatcctctccgtta 5383059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 12861543 - 12861602
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaac 87  Q
    ||||||||||||| | |  |||| ||||||||||||||||||||||||| ||| ||||||    
T  12861543 aggcttaatacatcctctcgtcccttaacttattttattttctcagtttggtcccttaac 12861602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 15509253 - 15509312
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||  ||  ||||||||||||  ||||||| |||||||||||||    
T  15509253 aagtgtctcaatttggtcccttatgtcttctgccgttacctattttggtcctctccgtta 15509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 21389200 - 21389142
Alignment:
Q  93 agtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||| |||| |||||  |||||||||| | | |||||||||||||    
T  21389200 agtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgtta 21389142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 15856584 - 15856636
Alignment:
Q  84 taaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    |||| ||||||||| |||||||| ||| |||||||||||||||||||| |||||    
T  15856584 taactattaagtgtatcaatttgatcc-ataactcttctgccgtttaccatttt 15856636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 18695715 - 18695646
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || ||||||||||||||||||| |||| |||||  |||||||||| | | ||| |||||||||    
T  18695715 cttaactataaagtgtctcaatttggtcccataagtcttcatccgtttactaatatggtcatctccgtta 18695646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 19827198 - 19827153
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    ||||||||||||||||||| |||| |||||| |||||||| |||||    
T  19827198 aagtgtctcaatttggtcccataaatcttcttccgtttaccatttt 19827153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 26403458 - 26403503
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacaca 211  Q
    |||||||||| ||||||||||||||| |||||||| ||| ||||||    
T  26403458 tgtcatttaaaattgatgatcaatggttgaatttaaaaaacacaca 26403503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 8187179 - 8187254
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctg 123  Q
    |||| |||| ||||||||||||||||||||| || |||||| ||||| ||| ||||||| |||  |||| |||||||    
T  8187179 gtcccttaatttattttattttctcagtttaatc-cttaactattaaatgtgtcaatttagtctcataattcttctg 8187254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 12936206 - 12936102
Alignment:
Q  46 agtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctct 145  Q
    ||||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||| |||| |||| ||| |||||| ||||| ||| | |    
T  12936206 agtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtttaccattttggtcattt 12936107  T
Q  146 ccgtt 150  Q
    |||||    
T  12936106 ccgtt 12936102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 20988844 - 20988912
Alignment:
Q  168 tcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||| ||||||| ||||  ||||  |||| |||||| |||||||||  ||||||||||||    
T  20988844 tcatttaagattggtgatcaaaggctagatttgaaaagtacacaagtatacaatgggctcacaacatat 20988912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 26404277 - 26404209
Alignment:
Q  83 ttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||| || ||||||||||||||| ||| |||| |||| || | ||||||||||| |||||| ||||||    
T  26404277 ttaactataaagtgtctcaatttgatcccataaatcttatgtcatttactattttggtcctcaccgtta 26404209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 40059394 - 40059326
Alignment:
Q  84 taaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||| ||||||||| | || ||||||| |||||||||||||||||||  ||||| ||  ||||||||||    
T  40059394 taactattaagtgttttaaattggtccaataactcttctgccgtttatcattttggtgatctccgttaa 40059326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 42980767 - 42980707
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||||||||||||||||  |||  ||||||||| ||||| ||||| ||||| ||||||||    
T  42980767 aagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcctttccgttaa 42980707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 36511453 - 36511330
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||| ||| |||||| || ||||||||||||||||||| |||| ||||||| |||    
T  36511453 aggcttaatacatcccccagtcccttaatttattttattttctcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgt 36511354  T
Q  128 ttactattttagtcctctccgtta 151  Q
    |||||||||| ||| |||||||||    
T  36511353 ttactattttggtcatctccgtta 36511330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 51726964 - 51726843
Alignment:
Q  30 gcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttt 129  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||| | |||| ||||||| |||||    
T  51726964 gcttaatacatcccccggtcccttaacttattttattttctcagtttggtcatttaactataaagtgtctcaatttggttccataaatcttctgtcgttt 51726865  T
Q  130 actattttagtcctctccgtta 151  Q
    ||||||||||||||| ||||||    
T  51726864 actattttagtcctcaccgtta 51726843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 14765216 - 14765093
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| | || |||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||| |||| | || ||| ||    
T  14765216 aggcttaatacattctccggtcctttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaattttttgcagt 14765117  T
Q  128 ttactattttagtcctctccgtta 151  Q
    |||||||||  |||||||||||||    
T  14765116 ttactatttcggtcctctccgtta 14765093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 22167771 - 22167896
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgcc 125  Q
    ||||||||||||||| ||| | ||| ||||||||||||| ||||||||||||||| |||||  ||||||||| |||||||||||| |||| |||||||||    
T  22167771 taaggcttaatacatcccctaatcccttaacttattttaatttctcagtttagtcccttaaatattaagtgtttcaatttggtcccataaatcttctgcc 22167870  T
Q  126 gtttactattttagtcctctccgtta 151  Q
    ||||| |||||| || ||||| ||||    
T  22167871 gtttattattttggttctctctgtta 22167896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 14169613 - 14169722
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||  ||||| || || |||||||||||||||| |||| |||| || |||    
T  14169613 aggcttaatacattccccagtcccttaacttattttattttctcagtttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgt 14169712  T
Q  128 ttactatttt 137  Q
    ||||||||||    
T  14169713 ttactatttt 14169722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 2971833 - 2971924
Alignment:
Q  148 gttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    ||||||||| |||||| ||||||||||||||||  |||||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  2971833 gttaaccccttgtccacgtgtcatttaagattggcgatcaagggctggatttagaaagcacacaaatataaaatgaactcacaacatatgat 2971924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 36509829 - 36509928
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||||||||| ||| |||||| || |||||| |||||||||| | |||| ||||||||||||||||||||| || ||||||||||    
T  36509829 ttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgtta 36509928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 40812730 - 40812624
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    ||||||||||||  ||| |||| ||||||||||||||||||  ||||| ||| |||||| ||||||||||||||||||||  ||||||||||||||| ||    
T  40812730 ggcttaatacat--cccggtcccttaacttattttattttcctagtttggtcccttaactattaagtgtctcaatttggttatataactcttctgccatt 40812633  T
Q  129 tactatttt 137  Q
    |||||||||    
T  40812632 tactatttt 40812624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 8092591 - 8092715
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccg 126  Q
    ||||||||||||||  ||| |||| ||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||||| | |||| |||||  |||    
T  8092591 aaggcttaatacatctcccggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtatcaatttggttccataaatcttcctccg 8092690  T
Q  127 tttactattttagtcctctccgtta 151  Q
    ||||||  ||| ||||| |||||||    
T  8092691 tttactgatttggtcctttccgtta 8092715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 40811192 - 40811312
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttta 130  Q
    |||||||||| || | |||| |||||||||| ||||||||||||||  || |||||| ||||| |||||||||||| ||| ||||||||| |||||||||    
T  40811192 cttaatacatccctcggtcccttaacttattctattttctcagtttgatcccttaactattaaatgtctcaatttgatcccataactcttttgccgttta 40811291  T
Q  131 ctattttagtcctctccgtta 151  Q
     |||||| ||| |||||||||    
T  40811292 ttattttggtcatctccgtta 40811312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 19466329 - 19466204
Alignment:
Q  27 aaggcttaatacataccccag-tcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgcc 125  Q
    |||||||||||||| |||  | ||| || |||||||||||||||||||||| |||  ||||| || ||||||||||||||||||| |||| ||||||| |    
T  19466329 aaggcttaatacattcccttgatccctttacttattttattttctcagtttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtc 19466230  T
Q  126 gtttactattttagtcctctccgtta 151  Q
    |||||||||| | || ||||||||||    
T  19466229 gtttactattgtggttctctccgtta 19466204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 51725336 - 51725439
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccg 126  Q
    ||||||||||| || |||| |||| ||||||||||||| |||||||||||||||  ||||| || ||||||||||||||| ||||||||   ||||||||    
T  51725336 aaggcttaatatatcccccggtcccttaacttattttaatttctcagtttagtcctttaactataaagtgtctcaatttgatcctataaaatttctgccg 51725435  T
Q  127 ttta 130  Q
    ||||    
T  51725436 ttta 51725439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 3979381 - 3979312
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  3979381 cttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctccgtta 3979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 19464594 - 19464713
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| | ||||| |  |||||||||||||||| ||||||| ||| |||||  || |||||| |||||||||| | | || |||||||||||    
T  19464594 aggcttaatacatccaccagttccgtaacttattttattttttcagtttggtcccttaattataaagtgtttcaatttggttccacaaatcttctgccgt 19464693  T
Q  128 ttactattttagtcctctcc 147  Q
    |||||||||| ||| |||||    
T  19464694 ttactattttggtcatctcc 19464713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 24516327 - 24516430
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccg 126  Q
    |||||||||||||| |||| |||| ||||||||||||||||||| |||||  || |||||| ||||||||| |||||||||||  |||| |||||  |||    
T  24516327 aaggcttaatacatcccccggtcccttaacttattttattttctgagtttgatcccttaactattaagtgtgtcaatttggtctcataagtcttcctccg 24516426  T
Q  127 ttta 130  Q
    ||||    
T  24516427 ttta 24516430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 38283860 - 38283741
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||  |||| |||| ||||||||||||||||| |||||||||||   || | ||||||||| ||||||||||||||||  ||||||  ||||    
T  38283860 ggcttaatacactccccggtcccttaacttattttattttttcagtttagtcctctatctattaagtgtgtcaatttggtcctatatatcttctttcgtt 38283761  T
Q  129 tactattttagtcctctccg 148  Q
    ||||| | | ||||||||||    
T  38283760 tactaatgtggtcctctccg 38283741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 40110774 - 40110681
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttc 121  Q
    ||||||||||||| || |  ||| |||||||||||||||||||||||||  || |||||| ||||||||| |||||||||||| |||| |||||    
T  40110774 aggcttaatacatccctcgatcccttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtcccataagtcttc 40110681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 40109356 - 40109460
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| || |  ||| |||||||||||||||||||||||||  || ||||||  |||||||| |||||||||||| |||| |||||  |||||    
T  40109356 ggcttaatacatcccacgatcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatcttcatccgtt 40109455  T
Q  129 tacta 133  Q
    |||||    
T  40109456 tacta 40109460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 43807428 - 43807512
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||| ||||||||| | || |||||||||||||||||| |||||||||||||||  ||||| ||||| ||| |||||||||||||    
T  43807428 aaggtttaatacatcctccggtcctttaacttattttaatttctcagtttagtccattaactattaaatgtttcaatttggtcct 43807512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 13641315 - 13641374
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||||||    
T  13641315 aagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtta 13641374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 24517733 - 24517643
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttc 121  Q
    |||||||||| || | |||| |||||||||||||||||||||||||| || |||||   |||||||| |||||||||||| |||| |||||    
T  24517733 cttaatacatcccacggtcccttaacttattttattttctcagtttaatcccttaatttttaagtgtgtcaatttggtcccataaatcttc 24517643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 26803338 - 26803260
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttg 106  Q
    |||| |||||||| |||| |||| |||||||||||||||||||||||||  || |||||| ||||||||| ||||||||    
T  26803338 aggcataatacattccccggtcccttaacttattttattttctcagtttgatctcttaactattaagtgtgtcaatttg 26803260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 3978093 - 3978162
Alignment:
Q  83 ttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||| || ||||||||||||||| ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  3978093 ttaactataaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttaa 3978162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 21278188 - 21278109
Alignment:
Q  160 tccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    |||| |||||||||||||||| ||||||| | |||||||||||  || ||||||||||||||  ||||||||||| ||||    
T  21278188 tccacgtgtcatttaagattggtgatcaaagactgaatttagagggcgcacaaatatacaataaactcacaacatgtgat 21278109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 26056205 - 26056146
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| |||| || ||||||||||||| |||||||||||||    
T  26056205 aagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctccgtta 26056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 30743081 - 30743164
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||||  ||| |||||||||||||||||| ||||||| | | ||| |||||| ||||| ||| |||||||||||||    
T  30743081 aggcttaatacatctcccggtcctttaacttattttaatttctcaatgtggtcccttaactattaaatgtttcaatttggtcct 30743164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 38280846 - 38280925
Alignment:
Q  30 gcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    ||||||||||| | || ||||||||| |||||||||||||||||||| |||  ||||| ||||| ||| |||||||||||    
T  38280846 gcttaatacatcctccggtcctttaagttattttattttctcagtttggtccattaactattaattgtgtcaatttggtc 38280925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 42248363 - 42248304
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||||||| |||| || ||||||| ||||||||||||| |||||    
T  42248363 aagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctcttcgtta 42248304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 40812560 - 40812507
Alignment:
Q  182 tgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacata 235  Q
    |||||||| | || ||||||||||||||||||||||||||| ||||||||||||    
T  40812560 tgatcaattgttggatttagaaagcacacaaatatacaatgaactcacaacata 40812507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 49141564 - 49141495
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| ||||||||| |||| ||||||| |||| | ||||||||||||| ||||||||| |||||||||    
T  49141564 cttaactattaagtgtttcaaattggtcccataatttttctgccgtttaccattttagtcatctccgtta 49141495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 14764242 - 14764346
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||||||| | |||||  || |||||  ||||||||| | |||||||||  |||| ||||||| |||||||| |||||||| ||||    
T  14764242 gtcccttaacttattttatttttttagtttgatcccttaattattaagtgtgttaatttggtctcataagtcttctgtcgtttactgttttagtcatctc 14764341  T
Q  147 cgtta 151  Q
     ||||    
T  14764342 tgtta 14764346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 25787267 - 25787163
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||  |||| |||| |||| ||||||||||| ||||||||    
T  25787267 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatttactattttggtcctctc 25787168  T
Q  147 cgtta 151  Q
    |||||    
T  25787167 cgtta 25787163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 16217498 - 16217557
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||||||| |||| || | ||||||||||| ||| |||||||||    
T  16217498 aagtgtctcaatttggtcctataaatcttatgtcatttactattttggtcatctccgtta 16217557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 20953346 - 20953405
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||||||| ||||  | | ||||| |||||||||||||||||||    
T  20953346 aagtgtctcaatttggtcctataaatcttaagtcatttaccattttagtcctctccgtta 20953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 21277052 - 21277107
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctcc 147  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||  ||||||||    
T  21277052 aagtatctcaatttggtcccataaatcttctgccgtttactattttgatcctctcc 21277107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 47136745 - 47136686
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||   |||| |||| |||||||||||||||| |||||||||||||    
T  47136745 aagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgtta 47136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 47411506 - 47411447
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||  | ||||||||||    
T  47411506 aagtgtctcaatttggtcccataaatcttatgccgtttactattttgattctctccgtta 47411447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 14071261 - 14071203
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    ||||||||||||||||||| |||| ||||||| ||||||| ||||| ||||| ||||||    
T  14071261 aagtgtctcaatttggtcccataagtcttctgtcgtttaccattttggtcctttccgtt 14071203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 34531815 - 34531885
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||| ||||||| ||||  ||||  |||| ||||||||||||||||  ||||||||||||    
T  34531815 tgtcatttaagattggtgatcaagggctagatttgaaaagtacacaaatatacaatgggctcacaacatat 34531885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 2973106 - 2973025
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttacta 133  Q
    |||||||||||| | || ||| ||||||| |||||  || |||||||||||||||||||||||| ||||   ||||||||||    
T  2973106 ttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataagtcttaccccgtttacta 2973025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 50679889 - 50679820
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || ||||||||||||||||||| |||| |||||  |||||||||| | | |||||||||||||    
T  50679889 cttaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgtta 50679820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 9633788 - 9633892
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||||||||||||||||   || ||| ||| ||| |||||| || |||||||||||||||||  ||||| |||||  ||||||||  ||||  |||||||    
T  9633788 gtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttcaaccgtttacagttttgatcctctc 9633887  T
Q  147 cgtta 151  Q
    |||||    
T  9633888 cgtta 9633892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 25785981 - 25786085
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||| |||| |||| || |||||| |||||| ||||||||    
T  25785981 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtttattattttggtcctctc 25786080  T
Q  147 cgtta 151  Q
     ||||    
T  25786081 tgtta 25786085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 48332733 - 48332813
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttact 132  Q
    |||||||||||| | |||||| || |||| |||||| ||||| ||| ||||||||||||||||| |  ||| |||||||||    
T  48332733 ttaacttattttttcttctcacttcagtcccttaactattaaatgtttcaatttggtcctataaatactcttccgtttact 48332813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 48935072 - 48935004
Alignment:
Q  168 tcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||||||||| ||||  ||||  |||| |||||| |||||||||  ||||||||||||    
T  48935072 tcatttaagattgatgatcaagggctagatttgaaaagtacacaagtatacaatgggctcacaacatat 48935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 45570332 - 45570426
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcc 142  Q
    |||| ||||||||||||||||| ||||||| ||  |||||| || || |||||||| ||||||  |||||||||||||| ||  ||||||| ||||    
T  45570332 gtcccttaacttattttatttt-tcagtttggttccttaactatcaaatgtctcaacttggtctcataactcttctgccattacctattttggtcc 45570426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 47411042 - 47411101
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||  |||| |||| || ||||||||||||| ||| |||||||||    
T  47411042 aagtgtctcaatttggtctcataaatcttatgtcgtttactattttggtcatctccgtta 47411101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 13930733 - 13930675
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    ||||||||||||||||||| |||| |||| || ||||||| ||||| ||||| ||||||    
T  13930733 aagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggtcctttccgtt 13930675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 21246594 - 21246532
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaa 93  Q
    ||||||||||  ||| |||| ||||||||||||| ||||||||||| ||| |||||| |||||    
T  21246594 cttaatacatctcccggtcccttaacttattttaatttctcagtttggtcccttaactattaa 21246532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 25889457 - 25889387
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||| ||||||| ||||  ||||  |||  |||||| ||||||||| |||||||||||||    
T  25889457 tgtcatttaagattggtgatcaagggctagatttgaaaaatacacaagtatacaatggactcacaacatat 25889387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 35684167 - 35684097
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    |||||||||||||||  |||||| ||||  ||||| |||| |||||| |||||||||  ||||||||||||    
T  35684167 tgtcatttaagattggagatcaagggctagatttaaaaagtacacaagtatacaatgagctcacaacatat 35684097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 43808644 - 43808562
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    |||||||||||||| |  | |||| ||||||||||||| ||||||||| | ||| |||||| |||||  || |||||||||||    
T  43808644 aaggcttaatacatccttcggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtc 43808562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 48973350 - 48973420
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||| ||||||| ||||  ||||  |||| |||||| |||||||||  ||||||||||||    
T  48973350 tgtcatttaagattggtgatcaagggctagatttgaaaagtacacaagtatacaatgggctcacaacatat 48973420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 47411413 - 47411368
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacaca 211  Q
    ||||||||||||||| ||||||| || |||||||| ||||||||||    
T  47411413 tgtcatttaagattggtgatcaacggttgaatttaaaaagcacaca 47411368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 52181408 - 52181303
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    ||||||||||||||||| | || ||| ||| |||   |||| || |||||||||||||| |||  |||| |||| ||  |||||||||||| ||| ||||    
T  52181408 gtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtcatctc 52181309  T
Q  147 cgttaa 152  Q
    ||||||    
T  52181308 cgttaa 52181303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 14390319 - 14390375
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||| | |||| ||||||  ||||||| ||||| |||||||||||||    
T  14390319 tgtctcaatttggttccataaatcttctttcgtttaccattttggtcctctccgtta 14390375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 22169337 - 22169293
Alignment:
Q  32 ttaatacataccccagtcctttaacttattttattttctcagttt 76  Q
    |||||||||  |||||||| ||||||||||||| |||||||||||    
T  22169337 ttaatacatctcccagtcccttaacttattttaatttctcagttt 22169293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 25786118 - 25786190
Alignment:
Q  165 gtgtcatttaagattgatgatcaatggctgaatttagaaagcacaca-aatatacaatgcactcacaacatat 236  Q
    |||||||||||||||| ||||||| || || ||||| ||||||||||  | |||| ||| |||||||||||||    
T  25786118 gtgtcatttaagattggtgatcaacggttggatttaaaaagcacacatgacataccatggactcacaacatat 25786190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 26801938 - 26802042
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| | || |||  ||| ||||||||||||| |||||||  || |||||| ||||||||| | ||||| |||  |||| |||||  |||||    
T  26801938 ggcttaatacatcctccggtctcttagcttattttattttttcagtttgatcccttaactattaagtgtgtaaatttagtctcataagtcttcctccgtt 26802037  T
Q  129 tacta 133  Q
    |||||    
T  26802038 tacta 26802042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 47560197 - 47560257
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||| |||||||| |||| ||| | |||||||||||||| |||| ||| ||||||||||    
T  47560197 aagtgtttcaatttgatcctttaaatattctgccgtttactgttttggtcatctccgttaa 47560257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 38417547 - 38417670
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| | || |||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||| |||| |||| || |||    
T  38417547 aggcttaatacatcctcctgtcctttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaatcttatgtcgt 38417646  T
Q  128 ttactattttagtcctctccgtta 151  Q
    |||||||||  |||||||||||||    
T  38417647 ttactatttcggtcctctccgtta 38417670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 34438424 - 34438523
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||| |||| ||||||||||||||||||||| || ||||| ||||    
T  34438424 ttaacttattttattttctcagtttagtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctctgtta 34438523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 34439781 - 34439659
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| || |||||| ||||||||||||||||||||||| | ||| |||||| || || ||| |||||||||||| |||| ||||||||||||    
T  34439781 ggcttaatacatccctcagtcccttaacttattttattttctcagtgtggtcccttaactataaaatgtttcaatttggtcccataaatcttctgccgtt 34439682  T
Q  129 tactattttagtcctctccgtta 151  Q
    ||||||||| ||| |||||||||    
T  34439681 tactattttggtcatctccgtta 34439659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 50531877 - 50531765
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| || | |||| ||||||||||||||||||||| |||  || |||||| |||||||||||||||||||||| ||||||||| || ||||    
T  50531877 ggcttaatacatcccactgtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttttgtcgtt 50531778  T
Q  129 tactattttagtc 141  Q
    |||||||||||||    
T  50531777 tactattttagtc 50531765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 43419496 - 43419388
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    ||||||||||||  ||| |||| ||||||||||||||||||||||||| ||| |||||| || |||||||||||||||||||  ||||||||||||||||    
T  43419496 ggcttaatacatctcccggtcccttaacttattttattttctcagtttcgtcccttaactataaagtgtctcaatttggtcccttaactcttctgccgtt 43419397  T
Q  129 tactatttt 137  Q
      |||||||    
T  43419396 acctatttt 43419388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 44159080 - 44159202
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    ||||||||| ||  ||| |||||||||||||||||||||| |||||||  || |||||| ||||||||| |||||||||| | | |||||||||||||||    
T  44159080 ggcttaatatatctcccggtcctttaacttattttattttttcagtttgatctcttaactattaagtgtttcaatttggttccacaactcttctgccgtt 44159179  T
Q  129 tactattttagtcctctccgtta 151  Q
    || |||||| ||| |||||||||    
T  44159180 tattattttggtcatctccgtta 44159202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 38419115 - 38419016
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||||||||| |  |||||  ||||||||| |||||||||||  |||| |||||||||||||||| |||||||| |||||||||    
T  38419115 ttaacttattttattttctcagtttaattccttaattattaagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgtta 38419016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 43418023 - 43418106
Alignment:
Q  24 aataaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttgg 107  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||| || |||||| |||||||||    
T  43418023 aataaggcttaatacatcccccagtcctttaaattattttattttctcagtttggtcccttaactataaagtgtttcaatttgg 43418106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 41348230 - 41348326
Alignment:
Q  25 ataaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttc 121  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||||||  || |||||| ||||||||| |||||||| ||| |||| |||||    
T  41348230 ataaggcttaatacatcccctggtcctttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttgatcccataagtcttc 41348326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 6138989 - 6139114
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgcc 125  Q
    ||||||||||||||| | ||  ||| ||||||||||||||||||||||||| ||| |||||  ||||| |||||||||||||||  ||||||||| ||      
T  6138989 taaggcttaatacatcctccgatcccttaacttattttattttctcagtttggtcccttaattattaaatgtctcaatttggtctcataactcttatgtt 6139088  T
Q  126 gtttactattttagtcctctccgtta 151  Q
    ||||| |||||| ||| |||| ||||    
T  6139089 gtttattattttggtcatctctgtta 6139114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 50530521 - 50530606
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||||||||  |||||| |||||||||||  |||||||||||||    
T  50530521 ttaacttattttattttctcagtttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactatttt 50530606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 33376276 - 33376336
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  33376276 aagtgtctcaatttggtcccataaatcttctgtcgtttactattttagtcctctccgttaa 33376336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 33377467 - 33377363
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  33377467 gtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcctctc 33377368  T
Q  147 cgtta 151  Q
    |||||    
T  33377367 cgtta 33377363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 17319037 - 17319159
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    ||||||||||||  ||| |||  ||||||||||||| |||||||||||  || |||||| || |||||| |||||||||| | |||| ||||||| ||||    
T  17319037 ggcttaatacatcacccggtctcttaacttattttaatttctcagtttgatctcttaactataaagtgtttcaatttggttccataaatcttctggcgtt 17319136  T
Q  129 tactattttagtcctctccgtta 151  Q
    ||||||||| ||| || ||||||    
T  17319137 tactattttggtcttcaccgtta 17319159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 44128437 - 44128333
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||||||||||||||||   || ||| ||| ||| | |||| || |||||||||||||| ||||| ||| |||| |||||||||||||||| ||||||||    
T  44128437 gtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcctctc 44128338  T
Q  147 cgtta 151  Q
    |||||    
T  44128337 cgtta 44128333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 11113760 - 11113859
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||   || ||| ||||||| |||||| || ||||||||||||||||||  |||||||||||||||||||| ||||| ||| | |||||||    
T  11113760 ttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtttaccattttggtcatttccgtta 11113859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 40146690 - 40146524
Alignment:
Q  83 ttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta----------accccctgtccatgtgtcatt 172  Q
    ||||| || ||||||||||||||||||| |||| |||||| ||| |||||| | | ||| |||||||||          ||||| ||||||  |||||||    
T  40146690 ttaactataaagtgtctcaatttggtcccataagtcttcttccgattactaatgtggtcatctccgttagttttttttgaccccttgtccacatgtcatt 40146591  T
Q  173 taagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    |||| ||  ||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||||||    
T  40146590 taagtttagtgatcaagggctggatttagcaagcgcacaaatatacaatggacgcacaacatatgat 40146524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 53400243 - 53400302
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||||||| |||| || ||||||| |||||||||||||||||||    
T  53400243 aagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctccgtta 53400302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 11482791 - 11482873
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||  ||| |||| ||||||||||||| ||||||||||| ||| |||||| ||||| ||| |||||||||||||    
T  11482791 ggcttaatacatctcccggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcct 11482873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 43708831 - 43708913
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||| |||| |||  ||||||||||||| |||||||||||||||  ||||| ||||| ||| |||||||||||||    
T  43708831 ggcttaatacatcccccggtctcttaacttattttaatttctcagtttagtccattaactattaaatgtttcaatttggtcct 43708913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 5687223 - 5687292
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || ||||||||||||||||||| |||| |||| |||||||||||||||| ||| |||||||||    
T  5687223 cttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 44305037 - 44304977
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||||||||||||||||||||| ||||| || |||||||||||| ||| ||||||||||    
T  44305037 aagtgtctcaatttggtcctataaatcttccgctgtttactattttggtcatctccgttaa 44304977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 47572580 - 47572663
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||||| ||| | ||| ||||||||||||| |||||||| |||||| |||||| ||||| ||| |||||||||||||    
T  47572580 aaggcttaatacatccccga-tcccttaacttattttaatttctcagcttagtcccttaactattaaatgtttcaatttggtcct 47572663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 50496989 - 50497072
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||| | ||||||| | ||||||||||| ||||||||||||||  |||||| ||||| ||| | |||||||||||    
T  50496989 aggcttaatacatcctccagtccctcaacttattttaatttctcagtttagttccttaactattaaatgttttaatttggtcct 50497072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 26788585 - 26788639
Alignment:
Q  97 tctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||| |||| |||| ||||||||||||||||||||| |||||||||||||    
T  26788585 tctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgtta 26788639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 39592392 - 39592287
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||||| || ||| ||||||| | |||| || ||||||||||| |||||||  ||  ||||||| |||||||| |||| || |||||    
T  39592392 gtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggttctctc 39592293  T
Q  147 cgttaa 152  Q
    ||||||    
T  39592292 cgttaa 39592287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 41349647 - 41349554
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttc 121  Q
    ||||||||||||| |  | |||| |||||||||||||||||||||||||  || ||||||  |||||||| |||||||| ||| |||| |||||    
T  41349647 aggcttaatacattcaacggtcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttgatcccataaatcttc 41349554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 43709999 - 43709915
Alignment:
Q  24 aataaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    |||| |||||||||||| |||| |||| ||||||||||||| ||||||||| ||||| |||||| |||||  || |||||||||||    
T  43709999 aatatggcttaatacat-ccccggtcccttaacttattttaatttctcagtgtagtcccttaactattaaacgtttcaatttggtc 43709915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 47573772 - 47573683
Alignment:
Q  22 ttaataaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||| |||||||||||||| |||| |||| ||||||||||||| ||||||||| | ||| |||||| |||||  || | |||||||||||    
T  47573772 ttaaaaaggcttaatacatcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgttttaatttggtcct 47573683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 56000345 - 56000390
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||    
T  56000345 aagtgtctcaatttagtcctataactcttctgccgtttaccatttt 56000390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 11115083 - 11114979
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || |||| |||||||||||||| |||||||||||| ||||||| ||||| | ||||||    
T  11115083 gtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcgtttaccattttggacctctc 11114984  T
Q  147 cgtta 151  Q
    |||||    
T  11114983 cgtta 11114979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 15787560 - 15787500
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||||||||||||||||| |||||| || |||||||||| ||||| ||||||||| ||||    
T  15787560 aagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcctctccattaa 15787500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 28103554 - 28103486
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    |||||| || ||||||||||||||||||| ||||  |||||||||||||| ||||| ||||| ||||||    
T  28103554 cttaactataaagtgtctcaatttggtcccataagacttctgccgtttaccattttggtcctttccgtt 28103486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 48207820 - 48207736
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttac 131  Q
    ||||||||||||||||| | || ||| ||| ||| | |||  || |||||||||||||||||| |||||||||||| ||||||||    
T  48207820 gtcctttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgtttac 48207736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 1273491 - 1273432
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| |||| || ||||| ||||||| |||||||||||||    
T  1273491 aagtgtctcaatttggtcccataagtcttatgtcgtttgctattttggtcctctccgtta 1273432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 11094584 - 11094643
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||| ||||||||||||||| | |||||||||||||| |||| ||||||| |||||    
T  11094584 aagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcctcttcgtta 11094643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 15446728 - 15446669
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| |||||||||||| |||| | |||| |||||||||||||| |||||||||||||    
T  15446728 aagtgtttcaatttggtcccataaattttctaccgtttactattttggtcctctccgtta 15446669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 26045126 - 26045209
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||| |||| |||| ||||||||||||| ||||||||| | ||| |||||| |||||  || ||||||| |||||    
T  26045126 aggcttaatacatcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttagtcct 26045209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 46796084 - 46796025
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| |||||  |||||||||||| | |||||||||||||    
T  46796084 aagtgtctcaatttggtcccataagtcttcctccgtttactattgtggtcctctccgtta 46796025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 3533679 - 3533609
Alignment:
Q  79 tcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgt 149  Q
    |||| |||| || ||||||||||||||||||| ||||||||||| | |||||| ||||| ||||| |||||    
T  3533679 tcacctaactataaagtgtctcaatttggtccgataactcttctactgtttaccattttggtcctttccgt 3533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 26393194 - 26393140
Alignment:
Q  83 ttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    ||||| || ||||||||||||||||||| |||||||||||| ||||||| |||||    
T  26393194 ttaactataaagtgtctcaatttggtcccataactcttctgtcgtttaccatttt 26393140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 29663703 - 29663745
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  29663703 tgtctcaatttggtcccataactcttctgccgtttaccatttt 29663745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 29834397 - 29834327
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||| ||||||| ||||  ||||  |||| |||||| ||||||||| |||||||||||||    
T  29834397 tgtcatttaagattggtgatcaagggctatatttgaaaagtacacaagtatacaatggactcacaacatat 29834327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 526682 - 526613
Alignment:
Q  167 gtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    |||||||||||||| ||||||| |||| |||||  |||| |||||| |||||||||  ||||||||||||    
T  526682 gtcatttaagattggtgatcaagggctaaatttgaaaagtacacaagtatacaatgggctcacaacatat 526613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 44160532 - 44160475
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcactta 85  Q
    ||||||||||||| | || |||| ||||||||||||||||||||||||| ||| ||||    
T  44160532 aggcttaatacatcctccggtcccttaacttattttattttctcagtttggtccctta 44160475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 37560402 - 37560298
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||| |||| ||||  | |||||||||| || ||||||||    
T  37560402 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttacgacgtttactatcttggtcctctc 37560303  T
Q  147 cgtta 151  Q
    |||||    
T  37560302 cgtta 37560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 38370295 - 38370399
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||||  |||| || |||||| |||||||||||  |||||||||||| ||||||| ||||| ||| ||||    
T  38370295 gtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgtttaccattttggtcatctc 38370394  T
Q  147 cgtta 151  Q
    |||||    
T  38370395 cgtta 38370399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 55953907 - 55953851
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||  ||| |||| |||||||||||||||| |||||| ||||||    
T  55953907 tgtctcaatttggtcccgtaaatcttatgccgtttactattttggtcctccccgtta 55953851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 5688695 - 5688636
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||| | |||| |||| || ||||||||||||| ||| |||||||||    
T  5688695 aagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgtta 5688636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 23153231 - 23153156
Alignment:
Q  161 ccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    |||| ||||||||| |||| |||||||| || || ||||  ||| ||||||| ||||||||| |||||||||||||    
T  23153231 ccatatgtcatttaggattaatgatcaagggttggatttgaaaaacacacaattatacaatgaactcacaacatat 23153156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 27410740 - 27410686
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctcc 147  Q
    ||||||||||||||||||| |||| |||||| |||||||| ||||| |||||||||    
T  27410740 aagtgtctcaatttggtcc-ataaatcttcttccgtttaccattttggtcctctcc 27410686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 52658924 - 52659027
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||| ||| ||| | |||| || || ||| |||||||||| |||||| ||||||||||||||| | ||||||| | ||    
T  52658924 gtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccgtttaccagtttagtcatttc 52659023  T
Q  147 cgtt 150  Q
    ||||    
T  52659024 cgtt 52659027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 55953823 - 55953772
Alignment:
Q  160 tccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacaca 211  Q
    |||| |||||||||||||||| ||||||| || |||||||| ||||||||||    
T  55953823 tccacgtgtcatttaagattggtgatcaacggttgaatttaaaaagcacaca 55953772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 86866 - 86920
Alignment:
Q  97 tctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||| |||| | |||||||||||||| |||| ||| |||||||||    
T  86866 tctcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 86920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 6140413 - 6140359
Alignment:
Q  97 tctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||| | |||||||||||| ||||||||||||| ||| | |||||||    
T  6140413 tctcaatttggttccataactcttctgtcgtttactattttggtcatttccgtta 6140359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 27408776 - 27408866
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    |||| ||||||||||||   || ||| ||| ||||  |||| || ||||||||||||||||||| |||| |||||| |||||||| |||||    
T  27408776 gtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccatttt 27408866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 29833523 - 29833593
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||| ||||||||| ||||||| ||||  ||||  |||| |||||| ||||||||| |||||||||||||    
T  29833523 tgtcaattaagattggtgatcaagggctagatttgaaaagtacacaagtatacaatggactcacaacatat 29833593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 30672025 - 30671959
Alignment:
Q  170 atttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||| ||||||| ||||  ||||  |||| ||||||||||||||||  ||||||||||||    
T  30672025 atttaagattggtgatcaagggctagatttgaaaagtacacaaatatacaatgggctcacaacatat 30671959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 47242965 - 47243027
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    |||| ||||||||||||| |||||||||||| || |||||| ||||| ||| | |||||||||    
T  47242965 gtcccttaacttattttaatttctcagtttaatcccttaactattaaatgttttaatttggtc 47243027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 4373522 - 4373599
Alignment:
Q  160 tccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaa-tatacaatgcactcacaacatat 236  Q
    |||| |||||||||| ||||| |||| |||||||| ||||  ||||||||||   ||||||||| |||||||||||||    
T  4373522 tccacgtgtcatttaggattggtgattaatggctggatttgaaaagcacacatggtatacaatggactcacaacatat 4373599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 15787013 - 15787070
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||||||||||||| |||||| ||||||||||||  ||| |  |||||||||||||    
T  15787013 tgtctcaatttggtcccataacttttctgccgtttatcattatgatcctctccgttaa 15787070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 30683095 - 30683026
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || ||||||||||||||||||| |||| ||||| |||||| | | |||| ||| |||||||||    
T  30683095 cttaactataaagtgtctcaatttggtcccataaatcttcggccgttaattcttttggtcttctccgtta 30683026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 48206218 - 48206263
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    |||||| |||||||| |||||||||| |||| ||||||||||||||    
T  48206218 aagtgtttcaatttgatcctataacttttctaccgtttactatttt 48206263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 48206311 - 48206384
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    ||||| ||||||| |||||||||  | |  ||||||||||| |||| |||||||||| | ||||||||||||||    
T  48206311 tgtcacttaagatggatgatcaagagttagatttagaaagcgcacatatatacaatgaattcacaacatatgat 48206384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 5417317 - 5417381
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||| ||||||||||||| ||| ||||||| ||| |||||| ||||| ||| |||||||| ||||    
T  5417317 gtcccttaacttattttaatttttcagtttggtcccttaactattaaatgtttcaatttgatcct 5417381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 35787861 - 35787913
Alignment:
Q  99 tcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||| |||| ||||||| |||||||  |||| |||||||||||||    
T  35787861 tcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgtta 35787913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 47668700 - 47668596
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    ||||||||||||||||| | || ||| ||| ||| | |||| || ||||||||||| |||||||  ||  || ||||||||||| | |||| ||||||||    
T  47668700 gtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgtttattgttttggtcctctc 47668601  T
Q  147 cgtta 151  Q
     ||||    
T  47668600 tgtta 47668596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 4336 - 4215
Alignment:
Q  31 cttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgttta 130  Q
    |||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||  |||||||||||||||||| ||  ||||||| |||||||||||    
T  4336 cttaatacat-ccctagtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaatttgatctcataactcgtctgccgttta 4238  T
Q  131 ctattttagtcctctccgttaac 153  Q
    | |||||  ||||||||||||||    
T  4237 ccattttgttcctctccgttaac 4215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 4167444 - 4167558
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccg 126  Q
    |||||||||||||| | ||  ||| |||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||||| ||||||| ||    
T  4167444 aaggcttaatacatcctccgatcccttaacttattttattttctcagtttaatcccttaactattaagtgtgtcaatttgatcctataagtcttctgtcg 4167543  T
Q  127 tttactattttagtc 141  Q
    |||||| ||||||||    
T  4167544 tttactgttttagtc 4167558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 10257508 - 10257397
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgt 127  Q
    ||||||||||||| || | |||| ||||||||||||||||||||| |||  || |||||| |||||||||||||||||||||| ||||||||  || |||    
T  10257508 aggcttaatacatcccactgtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactct--tgtcgt 10257411  T
Q  128 ttactattttagtc 141  Q
    ||||||||||||||    
T  10257410 ttactattttagtc 10257397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 35315346 - 35315221
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgcc 125  Q
    ||||||||||||||| |  | |||| |||||||||||||||||||||||||  || |||||  ||||||| | |||||||||||| |||| ||||||| |    
T  35315346 taaggcttaatacattcgtcggtcccttaacttattttattttctcagtttgatcccttaattattaagtatgtcaatttggtcccataagtcttctgtc 35315247  T
Q  126 gtttactattttagtcctctccgtta 151  Q
    ||||||| ||||||||||||| ||||    
T  35315246 gtttactgttttagtcctctctgtta 35315221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 22746423 - 22746319
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    ||||||||||||||||| | || ||| ||||||| | |||| || ||||||||||||||||||| |||| |||| ||||||||||||||||  |||||||    
T  22746423 gtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttgatcctctc 22746324  T
Q  147 cgtta 151  Q
    |||||    
T  22746323 cgtta 22746319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 33458443 - 33458534
Alignment:
Q  148 gttaaccccctgtccatgtgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    ||||||||| |||||| |||||||||||||||  ||||||| ||||| |||||| |||| ||||||||||||||| ||| ||||||||||||    
T  33458443 gttaaccccttgtccacgtgtcatttaagattagtgatcaagggctggatttagtaagcgcacaaatatacaatggacttacaacatatgat 33458534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 10256116 - 10256226
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccg 126  Q
    |||||||||||||| |||   ||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||  |||||  |||||||||||  ||    
T  10256116 aaggcttaatacattccctcatccattaacttattttattttctcagtttggtcccttaactattaagtgtctcaaaatggtctcataactcttctatcg 10256215  T
Q  127 tttactatttt 137  Q
    |||| ||||||    
T  10256216 tttagtatttt 10256226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 132102 - 132016
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttacta 133  Q
    |||| ||||||||||||||||||||||||| ||| |||||| ||||||||| || ||||||||| |||| |||||  ||||||||||    
T  132102 gtcccttaacttattttattttctcagtttggtcccttaactattaagtgtgtcgatttggtcccataagtcttcctccgtttacta 132016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 27899335 - 27899213
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| || |||||| ||||||||||||||||||| ||||| |||  ||||| || || | |||||||||| ||| |||| |||| || ||||    
T  27899335 ggcttaatacattcctcagtcccttaacttattttattttcttagtttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtt 27899236  T
Q  129 tactattttagtcctctccgtta 151  Q
    ||||||||| ||| | |||||||    
T  27899235 tactattttggtcttatccgtta 27899213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 22744759 - 22744864
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||||||| | |||| || |||||| ||||||||||||||||| |||| |||||||||||||||| ||| ||||    
T  22744759 gtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgccgtttactattttggtcttctc 22744858  T
Q  147 cgttaa 152  Q
    ||||||    
T  22744859 cgttaa 22744864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 19278411 - 19278470
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||    
T  19278411 aagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctcttcgtta 19278470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 47928552 - 47928469
Alignment:
Q  28 aggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||| || | |||| ||||||||||||| ||||| ||||||||| |||||| ||||| ||| |||||||||||||    
T  47928552 aggcttaatacatccctccgtcccttaacttattttaatttcttagtttagtctcttaactattaaatgtttcaatttggtcct 47928469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 40881083 - 40881168
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||||| |||| |||| ||||||||||||| ||||||||| | ||| |||||| |||||  || |||||||||||||    
T  40881083 taaggcttaatacatcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcct 40881168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 43930332 - 43930437
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| |||||  |||||||||||||||||||| ||||||| ||||||||||||| ||||||||    
T  43930332 gtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttggtcctctc 43930431  T
Q  147 cgttaa 152  Q
     |||||    
T  43930432 tgttaa 43930437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 46675002 - 46674933
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| || ||||||||| ||||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  46675002 cttaactataaagtgtctcgatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 22061898 - 22061794
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||| ||| ||| | |||| || ||  ||||||||||||||| |||| |||| |||||||||||||||||||| ||||    
T  22061898 gtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtttactattttagtcttctc 22061799  T
Q  147 cgtta 151  Q
    |||||    
T  22061798 cgtta 22061794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 46458781 - 46458713
Alignment:
Q  82 cttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    |||||| || ||||||||||||||||||| |||| |||||| |||||||| ||||| ||||||||||||    
T  46458781 cttaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtt 46458713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 47537163 - 47537079
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||| || |||| |||| |||||||||||||  |||||||||| ||| |||||| ||||| ||| |||||||||||||    
T  47537163 aaggcttaatatatcccccggtcccttaacttattttaacttctcagtttggtcccttaactattaaatgtttcaatttggtcct 47537079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 7347278 - 7347219
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||||||||| |||| || ||||||| |||||| ||||||||||||    
T  7347278 aagtgtctcaatttggtcctataaatcttatgtcgtttaccattttaatcctctccgtta 7347219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 40926623 - 40926516
Alignment:
Q  46 agtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctct 145  Q
    ||||| ||||||||||||   || ||| ||| ||| | |||| || |||||||||||||||||||||||| | |||| ||||||||  |||| |||||||    
T  40926623 agtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctaccgtttaccgttttggtcctct 40926524  T
Q  146 ccgttaac 153  Q
    ||||||||    
T  40926523 ccgttaac 40926516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 43007707 - 43007648
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| |||| || |||||||||||||||| ||||||||||    
T  43007707 aagtgtctcaatttggtcccataagtcttatgtcgtttactattttagttctctccgtta 43007648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 13446715 - 13446657
Alignment:
Q  93 agtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||| |||| |||||||||||||| ||| || |||||||||||||    
T  13446715 agtgtctcaatttggtcccataaatcttctgccgtttattatattggtcctctccgtta 13446657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 47927374 - 47927456
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||| | || |||  ||||||||||||| ||||||||||||||| |||||| ||||| ||| || ||||||||||    
T  47927374 ggcttaatacatgctccggtctcttaacttattttaatttctcagtttagtcccttaactattaaatgtttcgatttggtcct 47927456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 4857262 - 4857318
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| ||||||||| | || |||||||||||||||| ||||||||||||||||||    
T  4857262 tgtctcgatttggtcccacaaatcttctgccgtttactgttttagtcctctccgtta 4857318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 35484413 - 35484309
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||||||| |||||||| |||  ||||| || |||| | ||||||| |||| |||||||||||||| ||  ||||||| |||| ||     
T  35484413 gtcccttaacttattttatttcctcagtttggtcctttaactataaagtatttcaatttagtcccataactcttctgccattacctattttggtccactt 35484314  T
Q  147 cgtta 151  Q
    |||||    
T  35484313 cgtta 35484309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 36703005 - 36702949
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||| |||| | ||||||||||||||||||| ||||| |||||||    
T  36703005 tgtctcaatttggtcccataaatattctgccgtttactattttggtcctttccgtta 36702949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 43006398 - 43006502
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| ||||||||||||||||||||||  ||| |||| |||||||| ||||||| ||| ||||    
T  43006398 gtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgccgtttgctattttggtcatctc 43006497  T
Q  147 cgtta 151  Q
    |||||    
T  43006498 cgtta 43006502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 4168973 - 4168890
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    |||||||||||||||  ||   ||| |||||||||||||||||||||||||  || |||||| || |||||| |||||||||||    
T  4168973 taaggcttaatacatctcctgatcccttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaatttggtc 4168890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 28326448 - 28326389
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||| |||||| |||||  |||||||||||| | |||||||||||||    
T  28326448 aagtgtctcaatttggttctataagtcttcctccgtttactattgtggtcctctccgtta 28326389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 48672833 - 48672774
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||||| |||| ||   || |||||||||||||||||||||||||||    
T  48672833 aagtgtctcaatttggtcccataaatcgcgtgtcgtttactattttagtcctctccgtta 48672774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 48754054 - 48754113
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| ||||||| ||||||||| |||| || ||||||| |||||||||||||||||||    
T  48754054 aagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgtta 48754113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 13287115 - 13286993
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtt 128  Q
    |||||||||||| ||||  ||| |||  |||||||| ||||||  |||  || |||||| ||||||||| ||||||||||||  ||  |||| ||| |||    
T  13287115 ggcttaatacatcccccgatcccttagtttattttaatttctctatttgatcccttaactattaagtgtttcaatttggtcccttatgtcttatgctgtt 13287016  T
Q  129 tactattttagtcctctccgtta 151  Q
    ||||||||| ||||||| |||||    
T  13287015 tactattttggtcctcttcgtta 13286993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 24873655 - 24873597
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtt 150  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||| ||| | ||||||    
T  24873655 aagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtt 24873597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 30223941 - 30223871
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||| ||||||| ||||  ||||  |||| |||||| ||||||||| |||||||||||||    
T  30223941 tgtcatttaagattggtgatcaagggctagatttgaaaagtacacaagtatacaatggactcacaacatat 30223871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 43935243 - 43935288
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||    
T  43935243 aagtgtctcaatttggtctcataaatcttctgccgtttactatttt 43935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 43936105 - 43936032
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatatgat 239  Q
    |||||||||| ||||||||||||||| |  ||||  |||| |||||| |||||||||  |||||||||||||||    
T  43936105 tgtcatttaaaattgatgatcaatggttagatttgaaaagtacacaagtatacaatgagctcacaacatatgat 43936032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 14206738 - 14206790
Alignment:
Q  99 tcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||| ||||||| |||||||||||||  || |||||||||    
T  14206738 tcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtta 14206790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 14215428 - 14215480
Alignment:
Q  99 tcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||| ||||||| |||||||||||||  || |||||||||    
T  14215428 tcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtta 14215480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 19279715 - 19279611
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||| |||| | || || ||||||||||||| ||||| ||    
T  19279715 gtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgtttactattttggtcctttc 19279616  T
Q  147 cgtta 151  Q
    |||||    
T  19279615 cgtta 19279611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 33071741 - 33071677
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||| ||||||||||||| ||||||||||||||  |||||| ||||| ||| |||||||| ||||    
T  33071741 gtcccttaacttattttaatttctcagtttagttccttaactattaaatgtttcaatttgatcct 33071677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 4858399 - 4858348
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||||||||||||||| |||| |||||||  ||||||||||||| |||||||    
T  4858399 tgtctcaatttggtcccataaatcttctgttgtttactattttaatcctctc 4858348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 22060521 - 22060580
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||||| | | || |||| |||||||||||||||| ||| |||||||||    
T  22060521 aagtgtctcaatttggttccacaagtcttatgccgtttactattttggtcatctccgtta 22060580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 26406183 - 26406242
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||||||||||||| ||  |||||||||||||||||||  ||||| ||| |||||||||    
T  26406183 aagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgtta 26406242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 29409338 - 29409279
Alignment:
Q  50 ctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    |||||||||||||||||||||||||||  || |||||| || || |||||||| ||||||    
T  29409338 ctttaacttattttattttctcagtttgatcccttaactataaaatgtctcaaattggtc 29409279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 35128242 - 35128195
Alignment:
Q  99 tcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    ||||||||||||||||| |||| || ||||||||||||| ||||||||    
T  35128242 tcaatttggtcctataaatcttatgtcgtttactattttggtcctctc 35128195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 43936198 - 43936139
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||| ||| |||||||||  |||| ||||||| ||||||||||||| |||||||||||||    
T  43936198 aagtttcttaatttggtctcataattcttctgtcgtttactattttggtcctctccgtta 43936139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 47163211 - 47163270
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    ||||| || |||||||||| |||| |||| | |||||||||||||| |||||||||||||    
T  47163211 aagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgtta 47163270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 2904011 - 2903941
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||| ||||||||| || |||||  |||  |||||| |||||||||  ||||||||||||    
T  2904011 tgtcatttaagattggtgatcaatgactaaatttgaaaattacacaagtatacaatgggctcacaacatat 2903941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 30222797 - 30222867
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    ||||||||||||||| ||||||| | ||  ||||  |||| |||||| ||||||||| |||||||||||||    
T  30222797 tgtcatttaagattggtgatcaaggactagatttgaaaagtacacaagtatacaatggactcacaacatat 30222867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 36702838 - 36702880
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactatttt 137  Q
    |||||||||||||||| |||| | |||||||||||||||||||    
T  36702838 tgtctcaatttggtcccataaatattctgccgtttactatttt 36702880  T

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Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 37781952 - 37782034
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    |||||||||||| || | |||| |||| |||||||| ||||||||||| ||   ||||| ||||| ||| |||||||||||||    
T  37781952 ggcttaatacatccctcggtcccttaaattattttaatttctcagtttggttctttaactattaaatgtttcaatttggtcct 37782034  T

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Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 35127871 - 35127928
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||||||||| |||| |||| |||| |||||||||||||||| ||| ||| ||||||    
T  35127871 tgtctcaattttgtcccataaatcttatgccgtttactattttggtcatcttcgttaa 35127928  T

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Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 7148161 - 7148057
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||| ||| ||||  |||| || |||||| ||||||||||||  ||| |||| || |||||||| |||| || |||||    
T  7148161 gtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggttctctc 7148062  T
Q  147 cgtta 151  Q
    |||||    
T  7148061 cgtta 7148057  T

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Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 12631954 - 12631876
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtc 109  Q
    ||||||||||||  ||  |||| ||||||||||||||||| ||||||  ||| |||||| || ||||||||||||||||||    
T  12631954 ggcttaatacatctccaggtcccttaacttattttatttt-tcagttgggtc-cttaactataaagtgtctcaatttggtc 12631876  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 25153671 - 25153755
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttac 131  Q
    |||| ||||||||||||   || ||| ||| ||| | |||| || ||||||||||||||||||| |||| |||||| ||||||||    
T  25153671 gtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttccgtttac 25153755  T

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Target: scaffold0098 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 42449 - 42345
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||||||||||||||||  || |||||| |||| |||| |||||||| ||| |||| ||||||| ||||||||||||| ||||||||    
T  42449 gtcccttaacttattttattttctcagtttgatcccttaactattacgtgtatcaatttgatcccataaatcttctgtcgtttactattttggtcctctc 42350  T
Q  147 cgtta 151  Q
     ||||    
T  42349 tgtta 42345  T

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Target: scaffold0041 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 85200 - 85115
Alignment:
Q  26 taaggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||||| |||| |||| ||||||||||||| ||||||||| | ||| |||||| |||||  || |||||||||||||    
T  85200 taaggcttaatacatcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcct 85115  T

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Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 47131 - 47188
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  47131 tgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaa 47188  T

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Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 48523 - 48454
Alignment:
Q  83 ttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||| || ||||||||||||||| ||| |||| | |||||||||||||| |||| ||| ||||||||||    
T  48523 ttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtcatctccgttaa 48454  T

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Target: scaffold1974 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 731 - 627
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||| ||| ||| | |||| || |||||||||||||| |||| |||| ||||||||||||||| ||||| ||| ||||    
T  731 gtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctc 632  T
Q  147 cgtta 151  Q
    |||||    
T  631 cgtta 627  T

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Target: scaffold1878 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 543 - 647
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||| ||| ||| | |||| || |||||||||||||| |||| |||| ||||||||||||||| ||||| ||| ||||    
T  543 gtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctc 642  T
Q  147 cgtta 151  Q
    |||||    
T  643 cgtta 647  T

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Target: scaffold0290 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 9581 - 9477
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||| ||| ||| | |||| || |||||||||||||| |||| |||| ||||||||||||||| ||||| ||| ||||    
T  9581 gtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctc 9482  T
Q  147 cgtta 151  Q
    |||||    
T  9481 cgtta 9477  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 56758 - 56718
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttact 132  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  56758 aagtgtctcaatttggtcctataaatcttctgccgtttact 56718  T

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Target: scaffold2127 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 573 - 514
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||||||||   |||| |||| |||||||||||||||| |||||||||||||    
T  573 aagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgtta 514  T

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Target: scaffold0178 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 2323 - 2264
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||| |||||||||||| ||||||||||| | |||||||||||| ||||| |||||||    
T  2323 aagtgtttcaatttggtcccataactcttctactgtttactattttggtcctttccgtta 2264  T

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Target: scaffold0178; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 1269 - 1328
Alignment:
Q  92 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||| ||||||||||||| |||||| ||||| |||||||| ||| | |||||||||||||    
T  1269 aagtctctcaatttggtcatataacccttctaccgtttacaattgtggtcctctccgtta 1328  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 205673 - 205591
Alignment:
Q  29 ggcttaatacataccccagtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcct 111  Q
    ||||||||||||  ||| |||| ||||||||||||| ||||||||||| ||| |||||  |||||  || |||||||||||||    
T  205673 ggcttaatacatctcccggtcccttaacttattttaatttctcagtttggtcccttaattattaaacgtttcaatttggtcct 205591  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 204529 - 204577
Alignment:
Q  27 aaggcttaatacataccccagtcctttaacttattttattttctcagtt 75  Q
    |||||||||||||||| || |||| ||||||||||||| ||||||||||    
T  204529 aaggcttaatacatacaccggtcccttaacttattttaatttctcagtt 204577  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 145924 - 145867
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    ||||| |||||||||| |||| |||| |||||||||||||||| ||| ||||||||||    
T  145924 tgtcttaatttggtccaataaatcttatgccgtttactattttggtcatctccgttaa 145867  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 1906 - 1976
Alignment:
Q  166 tgtcatttaagattgatgatcaatggctgaatttagaaagcacacaaatatacaatgcactcacaacatat 236  Q
    |||||||||||||||| |||||| ||||  ||||  |||| |||||| |||||||||  ||||||||||||    
T  1906 tgtcatttaagattgaagatcaagggctagatttgaaaagtacacaagtatacaatgagctcacaacatat 1976  T

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Target: scaffold0051 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 22188 - 22245
Alignment:
Q  95 tgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgttaa 152  Q
    |||||||||||| ||  |||| ||||||| ||||||||||||| ||| ||||||||||    
T  22188 tgtctcaatttgttcacataaatcttctgtcgtttactattttggtcatctccgttaa 22245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 11719 - 11823
Alignment:
Q  47 gtcctttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctc 146  Q
    |||| |||||||||||| | || ||||||||||| | |||  || |||||| ||||||||||||  ||  |||||| | |||  ||||||| ||||||||    
T  11719 gtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttctccagttacctattttggtcctctc 11818  T
Q  147 cgtta 151  Q
    |||||    
T  11819 cgtta 11823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 77279 - 77179
Alignment:
Q  52 ttaacttattttattttctcagtttagtcacttaaccattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcctctccgtta 151  Q
    |||||||||||| | || ||| ||| ||| | |||| || ||| || |||||||||||| |||| | |||| ||||||||| |||| ||| |||||||||    
T  77279 ttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttggtcttctccgtta 77180  T
Q  152 a 152  Q
    |    
T  77179 a 77179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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