View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0654_low_14 (Length: 260)
Name: NF0654_low_14
Description: NF0654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0654_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 37204472 - 37204234
Alignment:
| Q |
1 |
gcagacctataatccaaaggcttattttagctccgtagaagacacatttacatacacagtactggagaatcatataagaaatctgtgtatctaaacaaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37204472 |
gcagacctataatccaaaggcttattttagctccgtagaagacacatttacatacacagtactggagaatcatataagaaatctgtgtatctaaacaaat |
37204373 |
T |
|
| Q |
101 |
catacaatcatcaactgcaaagcttcacttgttacctctcgagaattcacaatctctaggtttcctaaaaagagattcaaataattctgcattgcaactt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37204372 |
catacaatcatcaactgcaaagcttcacttgttacctctcgagaattcacaatctctaggtttcctaaaaagagattcaaataattctgcattgcaactt |
37204273 |
T |
|
| Q |
201 |
tggctctatctgcaactgactgctgacctcctgatgatg |
239 |
Q |
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|||||||||||||||||||||||||||||||| |||||| |
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| T |
37204272 |
tggctctatctgcaactgactgctgacctcctaatgatg |
37204234 |
T |
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