View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0654_low_5 (Length: 364)

Name: NF0654_low_5
Description: NF0654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0654_low_5
NF0654_low_5
[»] scaffold0116 (2 HSPs)
scaffold0116 (73-336)||(43700-43962)
scaffold0116 (73-291)||(47620-47837)
[»] chr6 (24 HSPs)
chr6 (73-336)||(25956537-25956799)
chr6 (73-336)||(27851111-27851373)
chr6 (73-251)||(20734128-20734304)
chr6 (223-336)||(19399814-19399928)
chr6 (253-336)||(31630622-31630705)
chr6 (95-231)||(22420982-22421117)
chr6 (85-231)||(2201134-2201278)
chr6 (282-336)||(18927880-18927934)
chr6 (76-246)||(34296953-34297121)
chr6 (252-336)||(20734158-20734243)
chr6 (252-336)||(22421023-22421108)
chr6 (252-336)||(34296980-34297065)
chr6 (282-336)||(28708678-28708732)
chr6 (252-336)||(2201175-2201260)
chr6 (108-201)||(19399803-19399895)
chr6 (225-269)||(16624503-16624547)
chr6 (239-269)||(16760468-16760498)
chr6 (95-169)||(18927900-18927973)
chr6 (239-269)||(31477713-31477743)
chr6 (240-269)||(16624305-16624334)
chr6 (291-336)||(18708704-18708749)
chr6 (291-336)||(23151069-23151114)
chr6 (291-336)||(27322221-27322266)
chr6 (220-268)||(27325487-27325535)
[»] chr4 (25 HSPs)
chr4 (73-333)||(13844485-13844744)
chr4 (73-336)||(46642777-46643038)
chr4 (153-332)||(15099295-15099463)
chr4 (73-251)||(33186097-33186273)
chr4 (250-336)||(52873249-52873335)
chr4 (223-336)||(15868765-15868877)
chr4 (253-336)||(362189-362272)
chr4 (239-336)||(630846-630942)
chr4 (153-224)||(15190360-15190430)
chr4 (282-336)||(9923353-9923407)
chr4 (282-336)||(11479452-11479506)
chr4 (73-247)||(35812171-35812342)
chr4 (282-336)||(35812231-35812285)
chr4 (97-226)||(15880717-15880845)
chr4 (252-336)||(33186158-33186243)
chr4 (223-295)||(13812865-13812936)
chr4 (252-336)||(15880753-15880838)
chr4 (241-336)||(32851329-32851421)
chr4 (95-169)||(9923373-9923446)
chr4 (239-269)||(10713026-10713056)
chr4 (239-269)||(10926796-10926826)
chr4 (95-169)||(11479413-11479486)
chr4 (239-269)||(12487884-12487914)
chr4 (291-336)||(19609528-19609573)
chr4 (239-295)||(22634285-22634339)
[»] chr1 (19 HSPs)
chr1 (73-336)||(28194365-28194627)
chr1 (73-336)||(43697316-43697578)
chr1 (153-332)||(35981694-35981862)
chr1 (153-268)||(49261340-49261454)
chr1 (153-268)||(20636849-20636963)
chr1 (250-336)||(43543053-43543139)
chr1 (95-251)||(51274290-51274445)
chr1 (253-336)||(46382652-46382733)
chr1 (75-209)||(12328538-12328670)
chr1 (252-320)||(51274299-51274368)
chr1 (282-324)||(48301079-48301121)
chr1 (252-320)||(8885469-8885538)
chr1 (252-336)||(12328566-12328651)
chr1 (85-165)||(8885477-8885556)
chr1 (225-269)||(39244030-39244074)
chr1 (225-269)||(39247585-39247629)
chr1 (225-269)||(41388135-41388179)
chr1 (239-269)||(1925032-1925062)
chr1 (239-269)||(20924046-20924076)
[»] chr5 (25 HSPs)
chr5 (73-336)||(5889092-5889353)
chr5 (235-336)||(29915150-29915251)
chr5 (73-251)||(12122202-12122378)
chr5 (73-251)||(21555060-21555236)
chr5 (73-251)||(21557726-21557902)
chr5 (75-250)||(31455686-31455862)
chr5 (75-250)||(31455073-31455249)
chr5 (153-268)||(21741539-21741653)
chr5 (223-336)||(21871627-21871739)
chr5 (223-336)||(21875907-21876019)
chr5 (85-231)||(24212383-24212527)
chr5 (73-251)||(30615751-30615926)
chr5 (155-251)||(17875209-17875304)
chr5 (85-231)||(35852638-35852782)
chr5 (252-336)||(12122232-12122317)
chr5 (252-336)||(24212424-24212509)
chr5 (73-246)||(36460170-36460341)
chr5 (252-336)||(36460226-36460311)
chr5 (256-336)||(21557760-21557841)
chr5 (252-320)||(35852695-35852764)
chr5 (223-295)||(24767393-24767463)
chr5 (239-269)||(10753537-10753567)
chr5 (256-320)||(31455765-31455830)
chr5 (281-332)||(21741655-21741707)
chr5 (284-336)||(30615812-30615864)
[»] chr3 (36 HSPs)
chr3 (155-336)||(18439845-18440025)
chr3 (73-336)||(12269513-12269773)
chr3 (208-336)||(20630147-20630275)
chr3 (73-251)||(31224635-31224811)
chr3 (73-169)||(1988912-1989008)
chr3 (73-251)||(15447681-15447854)
chr3 (223-336)||(49969934-49970048)
chr3 (106-251)||(31415399-31415543)
chr3 (153-268)||(1465417-1465531)
chr3 (153-257)||(49389637-49389740)
chr3 (239-336)||(23413322-23413417)
chr3 (239-336)||(12852440-12852537)
chr3 (73-246)||(11912921-11913092)
chr3 (254-336)||(31415460-31415543)
chr3 (282-336)||(5841985-5842039)
chr3 (95-208)||(6808175-6808287)
chr3 (105-201)||(49969964-49970059)
chr3 (285-336)||(1988977-1989028)
chr3 (252-333)||(11912980-11913062)
chr3 (282-324)||(40812054-40812096)
chr3 (252-320)||(6808209-6808278)
chr3 (256-336)||(31224669-31224750)
chr3 (225-269)||(4107286-4107330)
chr3 (225-269)||(4111138-4111182)
chr3 (223-295)||(14665600-14665670)
chr3 (225-269)||(16750477-16750521)
chr3 (241-336)||(45797121-45797213)
chr3 (252-333)||(15447711-15447793)
chr3 (239-269)||(15965145-15965175)
chr3 (239-269)||(15969069-15969099)
chr3 (239-269)||(15972993-15973023)
chr3 (239-269)||(19775941-19775971)
chr3 (239-269)||(37439539-37439569)
chr3 (281-322)||(30175307-30175348)
chr3 (291-336)||(40807200-40807245)
chr3 (281-332)||(1465533-1465585)
[»] scaffold0009 (1 HSPs)
scaffold0009 (153-336)||(85191-85373)
[»] chr7 (30 HSPs)
chr7 (153-336)||(17232564-17232746)
chr7 (153-336)||(8468370-8468545)
chr7 (73-213)||(15439318-15439457)
chr7 (73-251)||(30820937-30821113)
chr7 (73-214)||(37727607-37727747)
chr7 (153-268)||(9389703-9389817)
chr7 (76-251)||(36685934-36686107)
chr7 (250-336)||(14270136-14270222)
chr7 (106-251)||(38480232-38480376)
chr7 (253-336)||(45847735-45847818)
chr7 (73-231)||(11092752-11092908)
chr7 (84-231)||(9320421-9320566)
chr7 (73-231)||(11085014-11085170)
chr7 (239-336)||(18302111-18302207)
chr7 (252-336)||(11092793-11092878)
chr7 (74-246)||(15213699-15213869)
chr7 (254-336)||(38480293-38480376)
chr7 (252-336)||(11085055-11085140)
chr7 (256-336)||(36685965-36686046)
chr7 (285-336)||(37727672-37727723)
chr7 (282-336)||(11391920-11391974)
chr7 (252-336)||(9320440-9320525)
chr7 (252-336)||(15213755-15213840)
chr7 (256-336)||(30820971-30821052)
chr7 (239-295)||(39267762-39267817)
chr7 (283-332)||(9389821-9389871)
chr7 (239-269)||(45169909-45169939)
chr7 (291-336)||(12371482-12371527)
chr7 (291-336)||(13148275-13148320)
chr7 (239-295)||(9751619-9751673)
[»] chr8 (23 HSPs)
chr8 (89-229)||(39833889-39834029)
chr8 (73-251)||(21579887-21580063)
chr8 (73-251)||(29763549-29763724)
chr8 (253-336)||(27472391-27472474)
chr8 (253-336)||(38550086-38550169)
chr8 (250-336)||(1327117-1327203)
chr8 (121-251)||(41680850-41680979)
chr8 (73-246)||(42560208-42560379)
chr8 (252-336)||(29763579-29763664)
chr8 (73-201)||(18760580-18760706)
chr8 (282-336)||(18760591-18760645)
chr8 (252-333)||(21579917-21579999)
chr8 (121-231)||(32807280-32807389)
chr8 (285-336)||(20982752-20982803)
chr8 (188-251)||(22965744-22965807)
chr8 (252-336)||(42560238-42560323)
chr8 (239-269)||(18862548-18862578)
chr8 (239-269)||(21383830-21383860)
chr8 (239-269)||(21411123-21411153)
chr8 (239-269)||(21805615-21805645)
chr8 (239-269)||(21827917-21827947)
chr8 (291-336)||(19139969-19140014)
chr8 (291-336)||(39936813-39936858)
[»] scaffold0071 (2 HSPs)
scaffold0071 (73-251)||(14335-14511)
scaffold0071 (252-320)||(14412-14481)
[»] chr2 (17 HSPs)
chr2 (74-251)||(24865452-24865627)
chr2 (86-251)||(22500984-22501147)
chr2 (86-251)||(22508918-22509081)
chr2 (74-251)||(7672240-7672409)
chr2 (282-336)||(6576430-6576484)
chr2 (252-320)||(24865481-24865550)
chr2 (281-336)||(24883657-24883712)
chr2 (75-201)||(6576419-6576543)
chr2 (73-151)||(2524410-2524487)
chr2 (252-317)||(7672269-7672335)
chr2 (252-320)||(22501061-22501130)
chr2 (252-320)||(22508995-22509064)
chr2 (239-269)||(1283562-1283592)
chr2 (239-269)||(1283600-1283630)
chr2 (282-324)||(24436259-24436301)
chr2 (239-269)||(30344894-30344924)
chr2 (252-300)||(2524440-2524489)
[»] scaffold1351 (2 HSPs)
scaffold1351 (74-251)||(1561-1736)
scaffold1351 (252-320)||(1638-1707)
[»] scaffold1137 (1 HSPs)
scaffold1137 (154-268)||(2299-2412)
[»] scaffold0737 (2 HSPs)
scaffold0737 (73-251)||(6359-6535)
scaffold0737 (252-336)||(6389-6474)
[»] scaffold0810 (2 HSPs)
scaffold0810 (73-144)||(3065-3136)
scaffold0810 (261-336)||(2988-3063)
[»] scaffold0100 (1 HSPs)
scaffold0100 (250-336)||(36140-36226)
[»] scaffold0075 (1 HSPs)
scaffold0075 (223-336)||(8350-8462)
[»] scaffold0513 (1 HSPs)
scaffold0513 (250-336)||(10961-11047)
[»] scaffold0004 (1 HSPs)
scaffold0004 (251-336)||(362948-363033)
[»] scaffold0395 (2 HSPs)
scaffold0395 (84-251)||(10890-11055)
scaffold0395 (252-336)||(10951-11036)
[»] scaffold0124 (2 HSPs)
scaffold0124 (239-336)||(24726-24822)
scaffold0124 (225-269)||(21950-21994)
[»] scaffold0815 (1 HSPs)
scaffold0815 (121-251)||(479-608)
[»] scaffold0142 (1 HSPs)
scaffold0142 (239-336)||(7720-7817)
[»] scaffold0061 (2 HSPs)
scaffold0061 (86-170)||(15421-15504)
scaffold0061 (86-170)||(24479-24562)
[»] scaffold0599 (4 HSPs)
scaffold0599 (73-246)||(4615-4786)
scaffold0599 (73-246)||(197-368)
scaffold0599 (252-333)||(256-338)
scaffold0599 (252-333)||(4674-4756)
[»] scaffold0434 (1 HSPs)
scaffold0434 (252-336)||(6770-6855)
[»] scaffold0192 (1 HSPs)
scaffold0192 (239-297)||(9851-9908)
[»] scaffold0001 (1 HSPs)
scaffold0001 (282-336)||(76946-77000)
[»] scaffold0371 (2 HSPs)
scaffold0371 (73-169)||(3140-3234)
scaffold0371 (282-336)||(3120-3174)
[»] scaffold0679 (1 HSPs)
scaffold0679 (282-336)||(2471-2525)
[»] scaffold0335 (1 HSPs)
scaffold0335 (286-336)||(861-911)
[»] scaffold0080 (3 HSPs)
scaffold0080 (81-247)||(59295-59458)
scaffold0080 (282-336)||(59347-59401)
scaffold0080 (239-269)||(49057-49087)
[»] scaffold0166 (1 HSPs)
scaffold0166 (223-295)||(9890-9960)
[»] scaffold0221 (1 HSPs)
scaffold0221 (223-274)||(12864-12914)
[»] scaffold0802 (2 HSPs)
scaffold0802 (95-169)||(5459-5532)
scaffold0802 (282-336)||(5498-5552)
[»] scaffold0415 (1 HSPs)
scaffold0415 (239-269)||(570-600)
[»] scaffold0229 (1 HSPs)
scaffold0229 (239-269)||(11404-11434)
[»] scaffold0157 (1 HSPs)
scaffold0157 (239-269)||(32563-32593)
[»] scaffold0141 (1 HSPs)
scaffold0141 (239-269)||(13990-14020)
[»] scaffold0031 (1 HSPs)
scaffold0031 (239-269)||(35989-36019)
[»] scaffold0012 (1 HSPs)
scaffold0012 (239-269)||(189280-189310)
[»] scaffold0384 (1 HSPs)
scaffold0384 (291-336)||(8189-8234)
[»] scaffold0134 (1 HSPs)
scaffold0134 (291-336)||(10029-10074)
[»] scaffold0375 (1 HSPs)
scaffold0375 (292-336)||(9106-9150)


Alignment Details
Target: scaffold0116 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 73 - 336
Target Start/End: Original strand, 43700 - 43962
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  43700 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaa 43799  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
    ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43800 atg-ttatatatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgattaa 43898  T
Q  273 tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43899 tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgat 43962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 73 - 291
Target Start/End: Original strand, 47620 - 47837
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  47620 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaa 47719  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47720 atg-ttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgattaa 47818  T
Q  273 tgttagattatttatatat 291  Q
    ||| ||| |||||||||||    
T  47819 tgtgagaatatttatatat 47837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 216; Significance: 1e-118; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 73 - 336
Target Start/End: Original strand, 25956537 - 25956799
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  25956537 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaa 25956636  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
    ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25956637 atg-ttatatatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgattaa 25956735  T
Q  273 tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25956736 tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgat 25956799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 73 - 336
Target Start/End: Complemental strand, 27851373 - 27851111
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||||| ||||| |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| ||| ||    
T  27851373 cagagaggatgaataagatgattta-tattgatgatttaccttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa 27851275  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
     | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||    
T  27851274 tttgttatatatgaagattattattgatggttacttgttgtgtatgtttaaatgatgttgtcttgttgttgtgctgaatatgatttactttgatgcttaa 27851175  T
Q  273 tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||| ||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  27851174 tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 27851111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 20734128 - 20734304
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| ||| |||||||| ||||| |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| ||| ||    
T  20734128 cagagaggatgaataaaatgattta-tattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa 20734226  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| |||||| |||||||||||||||| ||||| || ||||||||||||| |||| |||||||||||||||||||    
T  20734227 ttg-ttatatatgatgattattattgatggtgacttgctgcatatgtttaaatggtgttgtcttgctgttgtgatgaat 20734304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 223 - 336
Target Start/End: Complemental strand, 19399928 - 19399814
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatg 321  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||| | | ||||||||||||||||||||||  |||||||||||||||||    
T  19399928 aatgatgttgtcttactgttgtgatgaatatggtttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatg 19399829  T
Q  322 gttgtatttgatgat 336  Q
    ||| |||||||||||    
T  19399828 gttatatttgatgat 19399814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 31630622 - 31630705
Alignment:
Q  253 tgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||| ||||||||||||| ||||||    
T  31630622 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttataatggttgtattagatgat 31630705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 95 - 231
Target Start/End: Complemental strand, 22421117 - 22420982
Alignment:
Q  95 ttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattatt 194  Q
    ||||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| |||  ||| |||| |||||| |||||||    
T  22421117 ttaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattg-taattgttatatatgatgattatt 22421019  T
Q  195 attgatggttacttgttgtatatgtttaaatgatgtt 231  Q
    |||||| || |||||||| |||||| |||||| ||||    
T  22421018 attgatagtgacttgttgcatatgtctaaatggtgtt 22420982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 2201278 - 2201134
Alignment:
Q  85 ttaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatat 184  Q
    ||||||||||| ||||||| |||||||| |||| | |||||| |||||| || |||||| |||||||   ||||||||||| ||| || || ||| ||||    
T  2201278 ttaagatgatt-aatattgatgatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattg-ttatatat 2201181  T
Q  185 gaagattattattgatggttacttgttgtatatgtttaaatgatgtt 231  Q
    || |||||||||||||||| ||||| || |||||| |||||| ||||    
T  2201180 gatgattattattgatggtgacttgctgcatatgtctaaatggtgtt 2201134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 18927934 - 18927880
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||| ||||||    
T  18927934 atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 18927880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 34296953 - 34297121
Alignment:
Q  76 agaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatg 175  Q
    ||||||||| |||||||||| |||| || |||||||| |||| | ||| ||||||||| || |||||| |||||||   ||||||||||| |||  |||     
T  34296953 agaggatgaataagatgatt-aataatgatgatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattg-taatt 34297050  T
Q  176 gttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtga 246  Q
    |||| |||||| |||||||||| ||| | ||||| || ||||  || |||| ||||| ||||| |||||||    
T  34297051 gttatatatgatgattattattaatgttgacttgctgcatattatttaatggtgtttccttgcggttgtga 34297121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 20734158 - 20734243
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| |||||||    
T  20734158 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 20734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 22421108 - 22421023
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| |||||||    
T  22421108 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 22421023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 34296980 - 34297065
Alignment:
Q  252 atgatttactttgatgatta-atgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||| |||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| |||||||    
T  34296980 atgatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 34297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 28708732 - 28708678
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||||    
T  28708732 atttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgat 28708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 2201260 - 2201175
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| | | | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| |||||||    
T  2201260 atgatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 2201175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 19399895 - 19399803
Alignment:
Q  108 tttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattattattgatg 201  Q
    ||||| |||| | ||||||||||||| || |||||| |||||||  ||||||||||||||||  |||||||| || ||| ||||||| ||||||    
T  19399895 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttg-taatggttatatttgatgattattgttgatg 19399803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 16624547 - 16624503
Alignment:
Q  225 tgatgttttcttgctgttgtgatgaatatgatttactttgatgat 269  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||    
T  16624547 tgatgttattttgttgttgtgatgaatatgatttactttgatgat 16624503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 16760498 - 16760468
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  16760498 tgttgtgatgaatatgatttactttgatgat 16760468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 18927973 - 18927900
Alignment:
Q  95 ttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttg 169  Q
    ||||| |||| |||||| ||||| | |||||||||||| ||| |||||| |||||||  ||||||||||||||||    
T  18927973 ttaatgttgtggatttaagttgatgattaaatgtgaaa-gatttatatattgtgaaagatgttgatatgaagttg 18927900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 31477713 - 31477743
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  31477713 tgttgtgatgaatatgatttactttgatgat 31477743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 269
Target Start/End: Complemental strand, 16624334 - 16624305
Alignment:
Q  240 gttgtgatgaatatgatttactttgatgat 269  Q
    ||||||||||||||||||||||||||||||    
T  16624334 gttgtgatgaatatgatttactttgatgat 16624305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 18708749 - 18708704
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  18708749 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 18708704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 23151069 - 23151114
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  23151069 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 23151114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 27322221 - 27322266
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  27322221 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 27322266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 27325487 - 27325535
Alignment:
Q  220 ttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatga 268  Q
    |||||||||| | | ||| ||||||||| ||||||||||||||||||||    
T  27325487 ttaaatgatgctattttgttgttgtgataaatatgatttactttgatga 27325535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 73 - 333
Target Start/End: Complemental strand, 13844744 - 13844485
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  13844744 cagagaggatgattaagatgatttaatattattgatttacgttgatgattaaatgtgaaaatatctatataatgtgaaagttgttgatatggagttgcaa 13844645  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  13844644 atg-ttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtcttactgttgtgatgaatatgatttactttgattattaa 13844546  T
Q  273 tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgat 333  Q
    ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13844545 tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgat 13844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 73 - 336
Target Start/End: Complemental strand, 46643038 - 46642777
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| ||||||||||||||||||||| || | ||||| | |||| || |||||||| |||||| ||||||| ||||| ||||||||||| ||    
T  46643038 cagagaggatgactaagatgatttaatattgttgtttaaagttgatgattaa-tgcgaaaagatttatatattgtgaaagttgttaatatgaagttgtaa 46642940  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
     || ||||||||||||| |||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||    
T  46642939 ttg-ttacatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgctgccttgctgttgtgatgaatatgatttaatttgatgattaa 46642841  T
Q  273 tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||| |||  ||||||| | ||||||||| |  |||||||||||||||||||| |||||||||||    
T  46642840 tgtgagaagatttataaactgtgaaagacgttgatatgaagttgtaatggttatatttgatgat 46642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 332
Target Start/End: Complemental strand, 15099463 - 15099295
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||||||||||||| |||| |||| | || |||||||||| ||||||||||||| |||||||||||||| |||||| ||||||||| || |||||||    
T  15099463 ttgttgatatgaagttg-aaattgttatacataaagattattaatgatggttacttgctgtatatgtttaaaagatgttgtcttgctgtcgtaatgaata 15099365  T
Q  253 tgatttactttgatgattaatgttagattatttatat-attgtgaaagatgccgatatgaagttgtaatggttgtatttga 332  Q
    ||||| ||||||||           || ||||||||| ||||||||||||||  ||||||||| |||||||||||||||||    
T  15099364 tgattgactttgat-----------gaatatttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttga 15099295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 73 - 251
Target Start/End: Complemental strand, 33186273 - 33186097
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||| | ||||||||||||| || |||||| | |||||   ||||||||||||||| ||    
T  33186273 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 33186175  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| |||||| |||||||||||||||| ||||| || || ||||||||||||| | ||||| |||||||||||||    
T  33186174 ttg-ttatatatgatgattattattgatggtgacttgctgcatttgtttaaatgatgatgtcttgttgttgtgatgaat 33186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 52873249 - 52873335
Alignment:
Q  250 atatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  52873249 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 52873335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 223 - 336
Target Start/End: Original strand, 15868765 - 15868877
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatgg 322  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||||||||  ||| || |||||||||||||| ||||  |||||||||||||||||     
T  15868765 aatgatgttgttttgttgttgtgatgaatatgatttactttgatgattaatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatga 15868863  T
Q  323 ttgtatttgatgat 336  Q
    || ||| |||||||    
T  15868864 ttatatctgatgat 15868877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 362272 - 362189
Alignment:
Q  253 tgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |  ||||||||||| ||||||||||||| ||||||    
T  362272 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagacgttgatatgaagttataatggttgtattagatgat 362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 630846 - 630942
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||  ||||||||||||||||||||  ||| |||| |||||||||||| ||||  ||||||||||||||||| ||||||||||||||    
T  630846 tgttgtgatgaatacaatttactttgatgattaatgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgat 630942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 15190430 - 15190360
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaa 224  Q
    ||||||||||||||||| |||| |||| | ||||||||||||| ||||||||||||| ||||||||||||||    
T  15190430 ttgttgatatgaagttg-aaattgttatacatgaagattattaatgatggttacttgctgtatatgtttaaa 15190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 9923407 - 9923353
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||| ||||||    
T  9923407 atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 9923353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 11479452 - 11479506
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||| ||||||    
T  11479452 atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 11479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 247
Target Start/End: Original strand, 35812171 - 35812342
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    ||||||| || | |||||||||| ||| |||| |||||| ||||| | ||||||||| || ||| |||||| |||||||  ||||||||||||||||  |    
T  35812171 cagagagtataaataagatgatt-aatgttgtggatttaagttgatgattaaatgtggaa-gatttatatattgtgaaagatgttgatatgaagttg-ta 35812267  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgat 247  Q
    ||||||| ||  || ||||||| |||||| | ||||| || ||||  |  ||||||||| |||||||||||||||    
T  35812268 atggttatattggatgattattgttgatgttgacttgctgcatattatctaatgatgttgtcttgctgttgtgat 35812342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 35812231 - 35812285
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||| ||||||    
T  35812231 atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 35812285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 15880845 - 15880717
Alignment:
Q  97 aatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattattat 196  Q
    ||||||| |||||||| ||||   ||||||||||||| || |||||| |||||||   ||||||||||| |||  ||| |||| |||||| |||||||||    
T  15880845 aatattgatgatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattg-taattgttatatatgatgattattat 15880747  T
Q  197 tgatggttacttgttgtatatgtttaaatg 226  Q
    ||||||| ||||| |  |||||| ||||||    
T  15880746 tgatggtgacttgctacatatgtctaaatg 15880717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 33186243 - 33186158
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||| ||||||| |  |||||||||||||||| ||| ||| |||||||    
T  33186243 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgatgat 33186158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 13812865 - 13812936
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtg 295  Q
    ||||||||| | ||| |||||||||||||||||||||||| |||||||||||  ||| || ||||||||||||    
T  13812865 aatgatgttgttttgttgttgtgatgaatatgatttacttagatgattaatgagagaata-ttatatattgtg 13812936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 15880838 - 15880753
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||| ||||| ||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| |||||||    
T  15880838 atgatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 15880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 32851421 - 32851329
Alignment:
Q  241 ttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||| || |||| |||||||||||  ||| |||| | |||||||||| ||||  |||||||||||||||||  |||||||||||||    
T  32851421 ttgtgatgaatatggtt-actt-gatgattaatgagagaatatt-acatattgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgat 32851329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 9923446 - 9923373
Alignment:
Q  95 ttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttg 169  Q
    ||||| |||| |||||| ||||| | |||||||||||| ||| |||||| |||||||  ||||||||||||||||    
T  9923446 ttaatgttgtggatttaagttgatgattaaatgtgaaa-gatttatatattgtgaaagatgttgatatgaagttg 9923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 10713056 - 10713026
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  10713056 tgttgtgatgaatatgatttactttgatgat 10713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 10926826 - 10926796
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  10926826 tgttgtgatgaatatgatttactttgatgat 10926796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 11479413 - 11479486
Alignment:
Q  95 ttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttg 169  Q
    ||||| |||| |||||| ||||| | |||||||||||| ||| |||||| |||||||  ||||||||||||||||    
T  11479413 ttaatgttgtggatttaagttgatgattaaatgtgaaa-gatttatatattgtgaaagatgttgatatgaagttg 11479486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 12487914 - 12487884
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  12487914 tgttgtgatgaatatgatttactttgatgat 12487884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 19609573 - 19609528
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  19609573 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 19609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 22634285 - 22634339
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtg 295  Q
    |||||||||||||||||||||| |||||||||||||  ||| || ||||||||||||    
T  22634285 tgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtg 22634339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 73 - 336
Target Start/End: Original strand, 28194365 - 28194627
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  28194365 cagagaagatgattaggatgatttaatattgttgatttacgttgatgattaaatgtgaaaaaatctatataatgtgaaagttgttgatatgtagttgcaa 28194464  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
    ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28194465 atg-ttatatatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgattaa 28194563  T
Q  273 tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  28194564 tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgat 28194627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 73 - 336
Target Start/End: Complemental strand, 43697578 - 43697316
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  43697578 cagagaggatgattaagatgatttaatattgttgatttaagttgatgattaaatgtgaaaagatctatatagtgtgaaagttgttgatatggagttgcaa 43697479  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
    ||| ||| |||||||||||||||||| |||||||||| |||||||||||| |||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  43697478 atg-ttatatatgaagattattattgttggttacttgctgtatatgtttatatgatgctgtcttgctgttgtgataaatatgatttactttgatgattaa 43697380  T
Q  273 tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  43697379 tgtgagattattgatatattgtgaaagatgctgatatgaagttgtaatggttttatttgatgat 43697316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 153 - 332
Target Start/End: Original strand, 35981694 - 35981862
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||||||||||||| |||| ||| || |||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  35981694 ttgttgatatgaagttg-aaattgttgcacatgaagattactaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatgaata 35981792  T
Q  253 tgatttactttgatgattaatgttagattatttatat-attgtgaaagatgccgatatgaagttgtaatggttgtatttga 332  Q
    ||||| ||||||||           || ||||||||| ||||||||||||||  ||||||||| |||||||||||||||||    
T  35981793 tgattgactttgat-----------gaatatttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttga 35981862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 49261454 - 49261340
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||||||||||||| || || ||| | ||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||| ||||||||||    
T  49261454 ttgttgatatgaagttgtaattg-ttatacatgaagattattattgatggttacttgttatatatgtttaaatgatactgtcttgctgtcgtgatgaata 49261356  T
Q  253 tgatttactttgatga 268  Q
    ||||||||||||||||    
T  49261355 tgatttactttgatga 49261340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 20636963 - 20636849
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||| ||||||||| || || ||| | ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  20636963 ttgttgacatgaagttgtaattg-ttatacatgaatattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaata 20636865  T
Q  253 tgatttactttgatga 268  Q
    |||||| |||||||||    
T  20636864 tgattttctttgatga 20636849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 336
Target Start/End: Complemental strand, 43543139 - 43543053
Alignment:
Q  250 atatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||||    
T  43543139 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatgattgtattagatgat 43543053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 95 - 251
Target Start/End: Original strand, 51274290 - 51274445
Alignment:
Q  95 ttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattatt 194  Q
    ||||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||  ||||||||||||||||  ||| |||| ||| || |||||||    
T  51274290 ttaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttg-taattgttatataagatgattatt 51274388  T
Q  195 attgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    ||||||||| ||||| || ||||||||||||| | || | ||| |||||||||||||    
T  51274389 attgatggtgacttgatgcatatgtttaaatgtttttgttttgttgttgtgatgaat 51274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 46382652 - 46382733
Alignment:
Q  253 tgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||| ||| ||||||||  ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  46382652 tgatttactttgatgattaatgtgagaatatttata--ttgtgaaagatgttgatatgaagttgtaatggttttattagatgat 46382733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 12328538 - 12328670
Alignment:
Q  75 gagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaat 174  Q
    |||||||||| |||||||||| ||||||| |||||||| |||| | |||||| |||||| || |||||| |||||||   |||||||||||| ||  |||    
T  12328538 gagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatg-taat 12328635  T
Q  175 ggttacatatgaagattattattgatggttacttg 209  Q
     |||| |||||| |||||||||||||||| |||||    
T  12328636 tgttatatatgatgattattattgatggtgacttg 12328670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 320
Target Start/End: Original strand, 51274299 - 51274368
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||  ||||||||||||||||    
T  51274299 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaat 51274368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 48301121 - 48301079
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggtt 324  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  48301121 atttatatattgtgaaagatgttgatatgaagttgtaatggtt 48301079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 8885538 - 8885469
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| |||||||    
T  8885538 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 8885469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 12328566 - 12328651
Alignment:
Q  252 atgatttactttgatgattaatgtt-agattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||  || | | |||||||||||||||||||| |  ||||||||| |||||| ||| ||| |||||||    
T  12328566 atgatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaattgttatatatgatgat 12328651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 8885556 - 8885477
Alignment:
Q  85 ttaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaa 165  Q
    ||||||||||| ||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||   |||||||||||    
T  8885556 ttaagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaa 8885477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 39244030 - 39244074
Alignment:
Q  225 tgatgttttcttgctgttgtgatgaatatgatttactttgatgat 269  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||    
T  39244030 tgatgttattttgttgttgtgatgaatatgatttactttgatgat 39244074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 39247585 - 39247629
Alignment:
Q  225 tgatgttttcttgctgttgtgatgaatatgatttactttgatgat 269  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||    
T  39247585 tgatgttattttgttgttgtgatgaatatgatttactttgatgat 39247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 41388135 - 41388179
Alignment:
Q  225 tgatgttttcttgctgttgtgatgaatatgatttactttgatgat 269  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||    
T  41388135 tgatgttattttgttgttgtgatgaatatgatttactttgatgat 41388179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 1925032 - 1925062
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  1925032 tgttgtgatgaatatgatttactttgatgat 1925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 20924046 - 20924076
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  20924046 tgttgtgatgaatatgatttactttgatgat 20924076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 73 - 336
Target Start/End: Original strand, 5889092 - 5889353
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  5889092 cagagaggatgattatgatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaa 5889191  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
     || ||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  5889192 ttg-ttatacatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtctt-ctgtcgtgatgaatatgatttactttgatgattaa 5889289  T
Q  273 tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5889290 tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgat 5889353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 235 - 336
Target Start/End: Original strand, 29915150 - 29915251
Alignment:
Q  235 ttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatg 334  Q
    |||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  29915150 ttgctgttgtgatgaatatgatctactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatg 29915249  T
Q  335 at 336  Q
    ||    
T  29915250 at 29915251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 12122202 - 12122378
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||||||| ||    
T  12122202 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 12122300  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| |||||| |||||||||||||||| |||||  | |||||||||||||||| | |||||||||||||||||||    
T  12122301 ttg-ttatatatgatgattattattgatggtgacttgcggcatatgtttaaatgatgatgtcttgctgttgtgatgaat 12122378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 21555060 - 21555236
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||| || ||||  |||| | ||||||||||||| || |||||| |||||||   ||||| || |||||| ||    
T  21555060 cagagaggatgaataagatgatt-aatattgatgttttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaa 21555158  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| |||||| |||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||||    
T  21555159 ttg-ttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 21555236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 21557726 - 21557902
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||| || ||||  |||| | ||||||||||||| || |||||| |||||||   ||||||||||||||| ||    
T  21557726 cagagaggatgaataagatgatt-aatattgatgttttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 21557824  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| |||||| ||||||||||||| || ||||| || |||||||||||||||||| |||||||||| ||||||||    
T  21557825 ttg-ttatatatgatgattattattgatagtgacttgctgcatatgtttaaatgatgttgtcttgctgttatgatgaat 21557902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 75 - 250
Target Start/End: Complemental strand, 31455862 - 31455686
Alignment:
Q  75 gagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaat 174  Q
    |||||||||| |||||||||| ||||||| || ||||| |||| | ||||||||||||| || |||||| ||||||||  ||||||||||||||| || |    
T  31455862 gagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaa-t 31455765  T
Q  175 ggttacatatgaa---gattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaa 250  Q
     |||| | ||||    |||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||    
T  31455764 cgttataaatgatattgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaa 31455686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 250
Target Start/End: Complemental strand, 31455249 - 31455073
Alignment:
Q  75 gagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaat 174  Q
    |||||||||| |||||||||| ||||||| || ||||| |||| | ||||||||||||| || |||||| ||||||||  |||||||| |||||| || |    
T  31455249 gagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgtaa-t 31455152  T
Q  175 ggttacatatgaa---gattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaa 250  Q
     |||| | ||||    |||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||    
T  31455151 cgttataaatgatattgattattattgatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaa 31455073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 21741539 - 21741653
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||||| ||||||  |||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||    
T  21741539 ttgttgataagaagttt-aaattgttatacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatgtata 21741637  T
Q  253 tgatttactttgatga 268  Q
    ||||| | ||||||||    
T  21741638 tgattgaatttgatga 21741653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 336
Target Start/End: Original strand, 21871627 - 21871739
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatgg 322  Q
    ||||||| | ||||| ||||||||||||||||||||||||||| ||||||||  ||| |||| |||||||||||| ||||  |||||||||||||||||     
T  21871627 aatgatgctgtcttgttgttgtgatgaatatgatttactttgacgattaatgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatga 21871725  T
Q  323 ttgtatttgatgat 336  Q
    ||||||||||||||    
T  21871726 ttgtatttgatgat 21871739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 336
Target Start/End: Original strand, 21875907 - 21876019
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatgg 322  Q
    ||||||| | ||||| ||||||||||||||||||||||||||| ||||||||  ||| |||| |||||||||||| ||||  |||||||||||||||||     
T  21875907 aatgatgctgtcttgttgttgtgatgaatatgatttactttgacgattaatgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatga 21876005  T
Q  323 ttgtatttgatgat 336  Q
    ||||||||||||||    
T  21876006 ttgtatttgatgat 21876019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 24212527 - 24212383
Alignment:
Q  85 ttaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatat 184  Q
    ||||||||||| ||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||   |||||||||||||||  ||| |||| ||||    
T  24212527 ttaagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttg-taattgttatatat 24212430  T
Q  185 gaagattattattgatggttacttgttgtatatgtttaaatgatgtt 231  Q
    || ||||| |||||||||| ||||| || |||||| |||||||||||    
T  24212429 gatgattaatattgatggtgacttgctgcatatgtctaaatgatgtt 24212383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 251
Target Start/End: Complemental strand, 30615926 - 30615751
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||| | |||||| || | | ||||||||||||| || |||||| |||||||   ||||||||||||||| ||    
T  30615926 cagagaggatgaataagatgatt-aatattgataatttacttttatgattaaatgtgaaaatat-tatatattgtgaaagacgttgatatgaagttgtaa 30615829  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| |  ||| |||||||| ||||||| ||||| || ||||||||||| |||| | ||||||||||| |||||||    
T  30615828 ttg-ttataattgatgattattaatgatggtgacttgctgcatatgtttaaacgatgatgtcttgctgttgcgatgaat 30615751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 17875304 - 17875209
Alignment:
Q  155 gttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    |||||||||||||| | ||| |||| |||||| |||||||||||||||| ||||| || ||||||||||||||| || |||||||||||||| ||||    
T  17875304 gttgatatgaagtt-ctaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatattatcttgctgttgtgaagaat 17875209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 35852782 - 35852638
Alignment:
Q  85 ttaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatat 184  Q
    ||||||||||| ||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| |||  ||| |||| |||     
T  35852782 ttaagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattg-taattgttatatac 35852685  T
Q  185 gaagattattattgatggttacttgttgtatatgtttaaatgatgtt 231  Q
    || ||||||||||||||||  |||| || |||||| |||||| ||||    
T  35852684 gatgattattattgatggtggcttgctgcatatgtctaaatggtgtt 35852638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 12122232 - 12122317
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||||||||||| ||| ||| |||||||    
T  12122232 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 12122317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 24212509 - 24212424
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||||||||||| ||| ||| |||||||    
T  24212509 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 24212424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 73 - 246
Target Start/End: Complemental strand, 36460341 - 36460170
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    ||||||||||||  ||||||||| |||| || |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| |||  |    
T  36460341 cagagaggatgaacaagatgatt-aataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattg-ta 36460244  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtga 246  Q
    || |||| |||||| |||||||||| ||| | ||||| || ||||  || |||| |||| |||||| |||||||    
T  36460243 attgttatatatgatgattattattaatgttgacttgctgcatattatttaatggtgttgtcttgcggttgtga 36460170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 36460311 - 36460226
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| |||||||    
T  36460311 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 36460226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 21557760 - 21557841
Alignment:
Q  256 tttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||| |||||||||||| ||| | | |||||||||||||||||||| |  |||||||||||||||| ||| ||| |||||||    
T  21557760 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 21557841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 35852764 - 35852695
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| |||||||    
T  35852764 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 35852695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 24767393 - 24767463
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtg 295  Q
    ||||||||||| ||  |||||||||||||||||||||| |||||||||||||  ||| || ||||||||||||    
T  24767393 aatgatgtttttttattgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtg 24767463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 10753567 - 10753537
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  10753567 tgttgtgatgaatatgatttactttgatgat 10753537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 31455830 - 31455765
Alignment:
Q  256 tttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||| ||| | | |||||||||||||||||| | |  ||||||||||||||||    
T  31455830 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaat 31455765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 21741655 - 21741707
Alignment:
Q  281 tatttatata-ttgtgaaagatgccgatatgaagttgtaatggttgtatttga 332  Q
    |||||||||| |||||||||||||  ||||||| | |||||||||||||||||    
T  21741655 tatttatataattgtgaaagatgcttatatgaaatcgtaatggttgtatttga 21741707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 30615864 - 30615812
Alignment:
Q  284 ttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||| |  |||||||||||||||| ||| || ||||||||    
T  30615864 ttatatattgtgaaagacgttgatatgaagttgtaattgttataattgatgat 30615812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 155 - 336
Target Start/End: Original strand, 18439845 - 18440025
Alignment:
Q  155 gttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatg 254  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18439845 gttgatatgtagttgcaaatg-ttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatg 18439943  T
Q  255 atttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  18439944 atttactttgatgattaatgtgagaatatctatatattgtgaaagatgatgatatgaagttgtaatggttgtatttgatgat 18440025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 73 - 336
Target Start/End: Complemental strand, 12269773 - 12269513
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| ||||||||||||||||||||| || | ||||| | |||| ||  ||||||| |||||| ||||||| ||||||||||||||||| |     
T  12269773 cagagaggatgactaagatgatttaatattgttgtttaaagttgatgattaa-tga-aaaagatttatatattgtgaaagttgttgatatgaagttgtat 12269676  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa 272  Q
     |  ||||||||||||| |||||| | |||||||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||  |||||||||||    
T  12269675 ttt-ttacatatgaagaatattatcggtggttacttgttgtatatgtttaaatgatgctgccttgctgttgtcatgaatatgatttaagttgatgattaa 12269577  T
Q  273 tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||| |||  ||||||| ||| |||| || |  ||||||||||||||||| || |||||||||||    
T  12269576 tgtgagaagatttataaattttgaaggacgttgatatgaagttgtaatgattatatttgatgat 12269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 208 - 336
Target Start/End: Original strand, 20630147 - 20630275
Alignment:
Q  208 tgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgat 307  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||  |||    
T  20630147 tgttgtatatgtttaaatgatgttgtcttgctgttgtaatgaatatgatttactttgacgattaatgtgagaatatttatatattgtgaaagatgttgat 20630246  T
Q  308 atgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||| ||||||    
T  20630247 atgaagttgtaatggttgtattagatgat 20630275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 31224635 - 31224811
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||| || ||||| |||| | ||||||||||||| || ||||||||||||||   ||||||||||||||| ||    
T  31224635 cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaa 31224733  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| |||||| |||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||||    
T  31224734 ttg-ttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 31224811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 1988912 - 1989008
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttg 169  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1988912 cagagaggatgattaagatgatttaatattgttgattcacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgaagttg 1989008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 15447681 - 15447854
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||| | ||||||||||||| ||  |||||||||||||   |||||||||||||||  |    
T  15447681 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttg-ta 15447778  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    || |||| ||||   |||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||||    
T  15447779 attgttatatat---gattattattgatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 15447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 223 - 336
Target Start/End: Original strand, 49969934 - 49970048
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatg 321  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||  |||||||||||||||||    
T  49969934 aatgatgttgtcttcctgttgtgatgaatatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatg 49970033  T
Q  322 gttgtatttgatgat 336  Q
    ||| |||||||||||    
T  49970034 gttatatttgatgat 49970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 106 - 251
Target Start/End: Complemental strand, 31415543 - 31415399
Alignment:
Q  106 gatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattattattgatggtta 205  Q
    ||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||||||| || || ||| |||||| |||||||||||||||| |    
T  31415543 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattg-ttatatatgatgattattattgatggtga 31415445  T
Q  206 cttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    |||| || |||||||||||||||||| |||||||||||||||||||    
T  31415444 cttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 31415399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 1465417 - 1465531
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||||||||||||| |||| |||| | ||||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||  ||||||||||    
T  1465417 ttgttgatatgaagttg-aaattgttatacatgaagattattaatgatggttacttgctctatatgtttaaatgatgttgtcttgctgccgtgatgaata 1465515  T
Q  253 tgatttactttgatga 268  Q
    ||||| ||||||||||    
T  1465516 tgattgactttgatga 1465531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 49389637 - 49389740
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    |||||| |||||||||| |||| |||| | |||||||| |||||| |||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  49389637 ttgttggtatgaagttg-aaattgttatacatgaagatcattattaatgggtacttattgtatatgtttaaatgatgttgtcttgctgtcgtgatgaata 49389735  T
Q  253 tgatt 257  Q
    |||||    
T  49389736 tgatt 49389740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 23413322 - 23413417
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||||| |||||||||||  ||| |||| | |||||||||| ||||  ||||||||||||||||| ||||||||||||||    
T  23413322 tgttgtgatgaatatgatttactt-gatgattaatgagagaatatt-acatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgat 23413417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 12852440 - 12852537
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaag-ttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||||||||||||| ||  ||| || |||||||||||| | ||||  ||||||||| |||||||| ||||||||||||||    
T  12852440 tgttgtgatgaatatgatttactttgatgattattgagagaata-ttatatattgtggatgatgatgatatgaagtttgtaatgattgtatttgatgat 12852537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 73 - 246
Target Start/End: Complemental strand, 11913092 - 11912921
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| |||| || |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| |||  |    
T  11913092 cagagaggatgaataagatgatt-aataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattg-ta 11912995  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtga 246  Q
    || |||| ||||||  ||||||||||||| | ||||| || ||||  || |||| ||||  ||||| |||||||    
T  11912994 attgttatatatgattattattattgatgttgacttgatgcatattatttaatggtgttgccttgcggttgtga 11912921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 31415543 - 31415460
Alignment:
Q  254 gatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||||||||||| ||| ||| |||||||    
T  31415543 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 31415460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 5842039 - 5841985
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| |||||||||||    
T  5842039 atttatatattgtgaaagatgctcataagaagttgtaatggttatatttgatgat 5841985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 6808287 - 6808175
Alignment:
Q  95 ttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattatt 194  Q
    ||||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| |||  ||| |||| |||| | |||||||    
T  6808287 ttaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattg-taattgttatatataatgattatt 6808189  T
Q  195 attgatggttactt 208  Q
    ||||||||| ||||    
T  6808188 attgatggtgactt 6808175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 49969964 - 49970059
Alignment:
Q  105 tgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattattattgatg 201  Q
    |||||||| |||| | ||||||||||||| || |||||| |||||||  ||||||||||||||||  |||||||| || ||| ||||||| ||||||    
T  49969964 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttg-taatggttatatttgatgattattgttgatg 49970059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 336
Target Start/End: Original strand, 1988977 - 1989028
Alignment:
Q  285 tatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||| |||||||| ||  ||||||||||||||||||||||||||||||||    
T  1988977 tatataatgtgaaagttgttgatatgaagttgtaatggttgtatttgatgat 1989028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 11913062 - 11912980
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgat 333  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| ||||    
T  11913062 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 11912980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 40812096 - 40812054
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggtt 324  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggtt 40812054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 6808278 - 6808209
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| |||||||    
T  6808278 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 6808209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 31224669 - 31224750
Alignment:
Q  256 tttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||| ||| | | |||||||||| ||||||||| |  |||||||||||||||| ||| ||| |||||||    
T  31224669 tttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 31224750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 4107286 - 4107330
Alignment:
Q  225 tgatgttttcttgctgttgtgatgaatatgatttactttgatgat 269  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||    
T  4107286 tgatgttattttgttgttgtgatgaatatgatttactttgatgat 4107330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 4111138 - 4111182
Alignment:
Q  225 tgatgttttcttgctgttgtgatgaatatgatttactttgatgat 269  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||    
T  4111138 tgatgttattttgttgttgtgatgaatatgatttactttgatgat 4111182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 295
Target Start/End: Complemental strand, 14665670 - 14665600
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtg 295  Q
    ||||||||| | ||| |||||||||||||||||||||| |||||||||||||  ||| || ||||||||||||    
T  14665670 aatgatgttgttttgttgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtg 14665600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 16750477 - 16750521
Alignment:
Q  225 tgatgttttcttgctgttgtgatgaatatgatttactttgatgat 269  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||    
T  16750477 tgatgttattttgttgttgtgatgaatatgatttactttgatgat 16750521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 45797213 - 45797121
Alignment:
Q  241 ttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||| || |||| |||||||||||  ||| |||| | |||||||||| ||||  |||||||||||||||||  |||||||||||||    
T  45797213 ttgtgatgaatatggtt-actt-gatgattaatgagagaatatt-acatattgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgat 45797121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 15447711 - 15447793
Alignment:
Q  252 atgatttactttgatgatt-aatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgat 333  Q
    ||||||||||||||||||| ||||| | | |||| ||||| ||||||||| |  |||||||||||||||| ||| ||| ||||    
T  15447711 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatatatgat 15447793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 15965175 - 15965145
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  15965175 tgttgtgatgaatatgatttactttgatgat 15965145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 15969099 - 15969069
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  15969099 tgttgtgatgaatatgatttactttgatgat 15969069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 15973023 - 15972993
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  15973023 tgttgtgatgaatatgatttactttgatgat 15972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 19775971 - 19775941
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  19775971 tgttgtgatgaatatgatttactttgatgat 19775941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 37439539 - 37439569
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  37439539 tgttgtgatgaatatgatttactttgatgat 37439569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 30175307 - 30175348
Alignment:
Q  281 tatttatatattgtgaaagatgccgatatgaagttgtaatgg 322  Q
    |||||||||| |||||||||||  ||||||||||||||||||    
T  30175307 tatttatatactgtgaaagatgttgatatgaagttgtaatgg 30175348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 40807245 - 40807200
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  40807245 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 40807200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 1465533 - 1465585
Alignment:
Q  281 tatttatata-ttgtgaaagatgccgatatgaagttgtaatggttgtatttga 332  Q
    |||||||||| |||||||||||||  ||||||||| |||||||||| ||||||    
T  1465533 tatttatataattgtgaaagatgcttatatgaagtcgtaatggttggatttga 1465585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 153 - 336
Target Start/End: Complemental strand, 85373 - 85191
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  85373 ttgttgatatggagttgcaaatg-ttatatatgaagattattattgatggttacttgatgtatatgtttaaatgaagttgtcttgctgttgtgatgaata 85275  T
Q  253 tgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  85274 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatagttgtatttgatgat 85191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 2e-68; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 153 - 336
Target Start/End: Complemental strand, 17232746 - 17232564
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | || |||||||||||||||||    
T  17232746 ttgttgatatggagttgcaaatg-ttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgatgatgtcatgctgttgtgatgaata 17232648  T
Q  253 tgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||| |||||||||||| ||||||    
T  17232647 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgat 17232564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 153 - 336
Target Start/End: Complemental strand, 8468545 - 8468370
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  8468545 ttgttgatatggagttgcagatg-ttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgat-------tgctgttgtgatgaata 8468454  T
Q  253 tgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  8468453 tgatttactttgatgattaatgtgataatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 8468370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 73 - 213
Target Start/End: Complemental strand, 15439457 - 15439318
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||  |||||||| |||||||||||||||||  |    
T  15439457 cagagaggatgactaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatactatgtgaaagttgttgatatgaagttg-ta 15439359  T
Q  173 atggttacatatgaagattattattgatggttacttgttgt 213  Q
    || |||| |||||||||||||||||||||||||||||||||    
T  15439358 attgttatatatgaagattattattgatggttacttgttgt 15439318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 30820937 - 30821113
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||| || ||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||||||| ||    
T  30820937 cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaa 30821035  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| |||||| |||||||||||||||| ||||| || |||||||||||||||||| ||||| |||||||||||||    
T  30821036 ttg-ttatatatgatgattattattgatggtaacttgctgcatatgtttaaatgatgttgtcttgttgttgtgatgaat 30821113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 73 - 214
Target Start/End: Original strand, 37727607 - 37727747
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||  |    
T  37727607 cagagaggatgattaagatgatttaatattgttgctttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgtagatatgaagttg-ta 37727705  T
Q  173 atggttacatatgaagattattattgatggttacttgttgta 214  Q
    ||||||  || ||| ||||||| |||||| | ||||| ||||    
T  37727706 atggttgtatttgatgattattgttgatgttgacttgctgta 37727747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 9389703 - 9389817
Alignment:
Q  153 ttgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaata 252  Q
    ||||||||||||||||| |||| | || | ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  9389703 ttgttgatatgaagttg-aaattgatatacatgaagattattaatgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaata 9389801  T
Q  253 tgatttactttgatga 268  Q
    ||||| ||||||||||    
T  9389802 tgattgactttgatga 9389817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 76 - 251
Target Start/End: Original strand, 36685934 - 36686107
Alignment:
Q  76 agaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatg 175  Q
    ||||||||| |||||||||| ||||||| || ||||| |||| | ||||||||||||| || |||||| |||||||   | ||||||||||||  || ||    
T  36685934 agaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattg 36686032  T
Q  176 gttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     ||| |||||| |||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||||    
T  36686033 -ttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 36686107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 14270136 - 14270222
Alignment:
Q  250 atatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  14270136 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 14270222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 106 - 251
Target Start/End: Complemental strand, 38480376 - 38480232
Alignment:
Q  106 gatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattattattgatggtta 205  Q
    ||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||||||| || || ||| |||||| |||||||||||||||| |    
T  38480376 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattg-ttatatatgatgattattattgatggtga 38480278  T
Q  206 cttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    |||| || |||| ||||||||||||| |||||||||||||||||||    
T  38480277 cttgctgcatatatttaaatgatgttgtcttgctgttgtgatgaat 38480232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 45847735 - 45847818
Alignment:
Q  253 tgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  45847735 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 45847818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 73 - 231
Target Start/End: Complemental strand, 11092908 - 11092752
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||  ||| |||||||||| ||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||  |||||||||||| |||  |    
T  11092908 cagagagtgtgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattg-ta 11092811  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgtt 231  Q
    || |||| |||||| |||||||||||||||| |||||||| ||| ||||||||| ||||    
T  11092810 attgttatatatgatgattattattgatggtgacttgttgcatacgtttaaatggtgtt 11092752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 9320421 - 9320566
Alignment:
Q  84 attaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacata 183  Q
    |||||||||||| ||||||| |||||||  |||| | ||||||||||||| || |||||| |||||||   ||||||||||| ||| || || ||| |||    
T  9320421 attaagatgatt-aatattgatgatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattg-ttatata 9320518  T
Q  184 tgaagattattattgatggttacttgttgtatatgtttaaatgatgtt 231  Q
    ||| |||||||||||||||| |||||||| |||||| |||||| ||||    
T  9320519 tgatgattattattgatggtgacttgttgcatatgtctaaatggtgtt 9320566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 231
Target Start/End: Complemental strand, 11085170 - 11085014
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||| | ||||||||||||  || |||||| |||||||   ||||||||||| |||  |    
T  11085170 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattg-ta 11085073  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgtt 231  Q
    || |||| |||||| |||||||||||||||| ||||| || ||| | ||||||| ||||    
T  11085072 attgttatatatgatgattattattgatggtgacttgctgcatacgattaaatggtgtt 11085014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 18302207 - 18302111
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||||||||||||| ||  ||| || |||||||||||| | || |  ||||||||||||||||| ||||||||||||||    
T  18302207 tgttgtgatgaatatgatttactttgatgattattgagagaata-ttatatattgtggatgaagatgatatgaagttgtaatgattgtatttgatgat 18302111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 11092878 - 11092793
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||  |||||||| ||||||| ||| ||| |||||||    
T  11092878 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaattgttatatatgatgat 11092793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 15213869 - 15213699
Alignment:
Q  74 agagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaa 173  Q
    ||||||||||| |||||||||| |||| || |||||||| |||| | ||||||||||||| || |||||| |||||||    |||||||||| |||  ||    
T  15213869 agagaggatgaataagatgatt-aataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattg-taa 15213772  T
Q  174 tggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtga 246  Q
    | |||| |||||| |||||||||||||| | ||||| || ||||  || |||| ||||  ||||| |||||||    
T  15213771 ttgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgcggttgtga 15213699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 38480376 - 38480293
Alignment:
Q  254 gatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||||||||||| ||| ||| |||||||    
T  38480376 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 38480293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 11085140 - 11085055
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| |||||||    
T  11085140 atgatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 11085055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 36685965 - 36686046
Alignment:
Q  256 tttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||| ||| | | |||||||||||||||||||| || ||||||||||| |||| ||| ||| |||||||    
T  36685965 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattgttatatatgatgat 36686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 336
Target Start/End: Original strand, 37727672 - 37727723
Alignment:
Q  285 tatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||| |||||||| ||  ||||||||||||||||||||||||||||||||    
T  37727672 tatataatgtgaaagttgtagatatgaagttgtaatggttgtatttgatgat 37727723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 11391920 - 11391974
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||||    
T  11391920 atttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgat 11391974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 9320440 - 9320525
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||| |||||||||||| ||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| |||||||    
T  9320440 atgatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 9320525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 15213840 - 15213755
Alignment:
Q  252 atgatttactttgatgatt-aatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||| ||||| | | ||||||||||||||||||||    |||||||| ||||||| ||| ||| |||||||    
T  15213840 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaattgttatatatgatgat 15213755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 30820971 - 30821052
Alignment:
Q  256 tttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||| ||| | | |||||||||||||||||| | |  |||||||||||||||| ||| ||| |||||||    
T  30820971 tttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaattgttatatatgatgat 30821052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 39267762 - 39267817
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtg 295  Q
    |||||||||||||||||||||||| |||||||||||  ||| || ||||||||||||    
T  39267762 tgttgtgatgaatatgatttacttagatgattaatgagagaata-ttatatattgtg 39267817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 9389821 - 9389871
Alignment:
Q  283 tttatata-ttgtgaaagatgccgatatgaagttgtaatggttgtatttga 332  Q
    |||||||| |||||||||||||  ||||||||| |||||||||||||||||    
T  9389821 tttatataattgtgaaagatgcttatatgaagtcgtaatggttgtatttga 9389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 45169909 - 45169939
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  45169909 tgttgtgatgaatatgatttactttgatgat 45169939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 12371527 - 12371482
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  12371527 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 12371482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 13148275 - 13148320
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  13148275 ttgtgaaagatgttgatatgaagttgtaatggttatattagatgat 13148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 9751619 - 9751673
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtg 295  Q
    |||||||||||||||||||||| |||||||||||||  ||| || ||||||||||||    
T  9751619 tgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtg 9751673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 9e-55; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 89 - 229
Target Start/End: Complemental strand, 39834029 - 39833889
Alignment:
Q  89 gatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaag 188  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||    
T  39834029 gatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataacgtgaatgttgttgatatgaagttgcaaatggttatatatgaag 39833930  T
Q  189 attattattgatggttacttgttgtatatgtttaaatgatg 229  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  39833929 attattattgatggttactcgctgtatatgtttaaatgatg 39833889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 21579887 - 21580063
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||||||| ||    
T  21579887 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 21579985  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| ||||||  ||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||||    
T  21579986 ttg-ttatatatgataattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 21580063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 29763549 - 29763724
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||| | ||||||||||||| || |||||| |||||||   |||||||||||||||  |    
T  29763549 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttg-ta 29763646  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    || |||| |||||| ||||||||| |||||| | ||| || |||||||||||||||| | |||||||||||||||||||    
T  29763647 attgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtcttgctgttgtgatgaat 29763724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 27472391 - 27472474
Alignment:
Q  253 tgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  27472391 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 27472474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 38550086 - 38550169
Alignment:
Q  253 tgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  38550086 tgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 38550169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 1327117 - 1327203
Alignment:
Q  250 atatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||    
T  1327117 atatgatttactttgatgattaatgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaatggttgtattagatgat 1327203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 121 - 251
Target Start/End: Original strand, 41680850 - 41680979
Alignment:
Q  121 ttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtt 220  Q
    ||||||||||||| || |||||| |||||||  | ||||||| || ||| || || ||| |||||| |||||||||||||||| ||||| || |||||||    
T  41680850 ttaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaattg-ttatatatgatgattattattgatggtgacttgctgcatatgtt 41680948  T
Q  221 taaatgatgttttcttgctgttgtgatgaat 251  Q
    |||||| || | ||||| |||||||||||||    
T  41680949 taaatggtgatgtcttgttgttgtgatgaat 41680979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 246
Target Start/End: Original strand, 42560208 - 42560379
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| |||| || |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| |||  |    
T  42560208 cagagaggatgaataagatgatt-aataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattg-ta 42560305  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtga 246  Q
    || |||| |||||| |||||||||||||| | ||||| || ||||  || |||| ||||  ||||| |||||||    
T  42560306 attgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttaccttgcggttgtga 42560379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 29763579 - 29763664
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||||||||||| ||| ||| |||||||    
T  29763579 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 29763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 18760706 - 18760580
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    ||||||| |||| |||||||||| |||||||| | |||| || || | |||||||||||||||| |||||| |||||||  |||||||||||||||   |    
T  18760706 cagagagtatgaataagatgatt-aatattgtgggtttaagtagatgattaaatgtgaaaagatttatatattgtgaaagatgttgatatgaagtt-ata 18760609  T
Q  173 atggttacatatgaagattattattgatg 201  Q
    ||||||| || ||| ||||||| ||||||    
T  18760608 atggttatatttgatgattattgttgatg 18760580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 18760645 - 18760591
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||  ||||||||||| |||||||| |||||||||||    
T  18760645 atttatatattgtgaaagatgttgatatgaagttataatggttatatttgatgat 18760591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 21579917 - 21579999
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgat 333  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||||||||||| ||| ||| ||||    
T  21579917 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 21579999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 32807389 - 32807280
Alignment:
Q  121 ttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtt 220  Q
    ||||||||||||| || |||||| |||||||   ||||||||||| ||| || || ||| |||||| |||||||||||||||| ||||| || ||||||     
T  32807389 ttaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattg-ttatatatgatgattattattgatggtgacttgctgcatatgtc 32807291  T
Q  221 taaatgatgtt 231  Q
    |||||| ||||    
T  32807290 taaatggtgtt 32807280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 336
Target Start/End: Original strand, 20982752 - 20982803
Alignment:
Q  285 tatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||   ||||||||||||||||||||||||| ||||||    
T  20982752 tatatattgtgaaagatattgatatgaagttgtaatggttgtattagatgat 20982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 22965807 - 22965744
Alignment:
Q  188 gattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    |||||||||||||||| | ||| || ||||||||||||| |||| |||||||||| ||||||||    
T  22965807 gattattattgatggtgatttgatgcatatgtttaaatggtgttgtcttgctgttatgatgaat 22965744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 42560238 - 42560323
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||| | |  |||||||| ||||||| ||| ||| |||||||    
T  42560238 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaattgttatatatgatgat 42560323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 18862548 - 18862578
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  18862548 tgttgtgatgaatatgatttactttgatgat 18862578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 21383860 - 21383830
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  21383860 tgttgtgatgaatatgatttactttgatgat 21383830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 21411153 - 21411123
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  21411153 tgttgtgatgaatatgatttactttgatgat 21411123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 21805645 - 21805615
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  21805645 tgttgtgatgaatatgatttactttgatgat 21805615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 21827917 - 21827947
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  21827917 tgttgtgatgaatatgatttactttgatgat 21827947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 19140014 - 19139969
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  19140014 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 19139969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 39936813 - 39936858
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  39936813 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 39936858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 73 - 251
Target Start/End: Complemental strand, 14511 - 14335
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||| | ||||||||||||| ||  |||||||||||||   ||||||||||||||| ||    
T  14511 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaa 14413  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| ||| || |||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||||    
T  14412 ttg-ttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 14335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 14481 - 14412
Alignment:
Q  252 atgatttactttgatgatt-aatgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||||| ||||| | | |||| ||||| ||||||||| |  ||||||||||||||||    
T  14481 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaat 14412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 24865452 - 24865627
Alignment:
Q  74 agagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaa 173  Q
    ||||||||||| |||||||||| ||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||  |||||||||||||||| ||     
T  24865452 agagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaat 24865550  T
Q  174 tggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    || ||| ||| || |||||||||||||||| ||||| || |||||||||||||||||| ||||||| |||||||||||    
T  24865551 tg-ttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtcttgctattgtgatgaat 24865627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 86 - 251
Target Start/End: Complemental strand, 22501147 - 22500984
Alignment:
Q  86 taagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatg 185  Q
    |||||||||| ||||||| |||||||| |||| | ||||||||||||| || ||||||||||||||   |||||||||||||||  ||| |||| ||| |    
T  22501147 taagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttg-taattgttatataag 22501050  T
Q  186 aagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    | ||||| |||||||||| ||||| || |||||||||||||||| | ||||||| |||||||||||    
T  22501049 atgattaatattgatggtaacttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaat 22500984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 86 - 251
Target Start/End: Complemental strand, 22509081 - 22508918
Alignment:
Q  86 taagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatg 185  Q
    |||||||||| ||||||| |||||||| |||| | ||||||||||||| || ||||||||||||||   |||||||||||||||  ||| |||| ||| |    
T  22509081 taagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttg-taattgttatataag 22508984  T
Q  186 aagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    | ||||| |||||||||| ||||| || |||||||||||||||| | ||||||| |||||||||||    
T  22508983 atgattaatattgatggtaacttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaat 22508918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 7672240 - 7672409
Alignment:
Q  74 agagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaa 173  Q
    ||||||||||| |||||||||| ||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||||||         
T  7672240 agagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagtt----- 7672333  T
Q  174 tggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
      |||| ||| || |||||||||||||||| ||||| || ||| |||||||||||| | |||||||||||||||||||    
T  7672334 --gttatataagatgattattattgatggtgacttgatgcatacgtttaaatgatgctgtcttgctgttgtgatgaat 7672409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 6576484 - 6576430
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||||||    
T  6576484 atttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgat 6576430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 320
Target Start/End: Original strand, 24865481 - 24865550
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||||||| ||| | | ||||||||||||||||||||||  ||||||||||||||||    
T  24865481 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaat 24865550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 24883712 - 24883657
Alignment:
Q  281 tatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||| ||||||    
T  24883712 tatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 24883657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 201
Target Start/End: Complemental strand, 6576543 - 6576419
Alignment:
Q  75 gagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaat 174  Q
    ||||| |||| |||||||||| ||| |||| |||||| ||||| | ||||| ||||||| || |||||| |||||||  ||||||||||||||||  |||    
T  6576543 gagagtatgaataagatgatt-aatgttgtggatttaagttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttg-taat 6576446  T
Q  175 ggttacatatgaagattattattgatg 201  Q
    ||||| || ||| ||||||| ||||||    
T  6576445 ggttatatttgatgattattgttgatg 6576419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 2524410 - 2524487
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaa 151  Q
    ||||||| |||| |||||||||| ||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||    
T  2524410 cagagagtatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaa 2524487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 7672269 - 7672335
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgt 317  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||||||||    
T  7672269 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgt 7672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 22501130 - 22501061
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||||||| ||| | | |||||||||| ||||||||| |  ||||||||||||||||    
T  22501130 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaat 22501061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 22509064 - 22508995
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||||||| ||| | | |||||||||| ||||||||| |  ||||||||||||||||    
T  22509064 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaat 22508995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 1283592 - 1283562
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  1283592 tgttgtgatgaatatgatttactttgatgat 1283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 1283630 - 1283600
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  1283630 tgttgtgatgaatatgatttactttgatgat 1283600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 24436301 - 24436259
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggtt 324  Q
    |||||||||||||||||||||  |||||||| |||||||||||    
T  24436301 atttatatattgtgaaagatgttgatatgaaattgtaatggtt 24436259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 30344894 - 30344924
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  30344894 tgttgtgatgaatatgatttactttgatgat 30344924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 2524440 - 2524489
Alignment:
Q  252 atgatttactttgatgatt-aatgttagattatttatatattgtgaaaga 300  Q
    ||||||||||||||||||| ||||| | | ||||||||||||||||||||    
T  2524440 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaaga 2524489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 1736 - 1561
Alignment:
Q  74 agagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaa 173  Q
    ||||||||| | |||||||||| ||||||| |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||||||| ||     
T  1736 agagaggattaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 1638  T
Q  174 tggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    || ||| ||| || |||||||||||||||| ||||| || |||||||||||||||||| ||||| |||||||||||||    
T  1637 tg-ttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtcttgttgttgtgatgaat 1561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 1707 - 1638
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaat 320  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  ||||||||||||||||    
T  1707 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 1638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 2299 - 2412
Alignment:
Q  154 tgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaatat 253  Q
    |||||||||||||||| |||| |||  | ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  2299 tgttgatatgaagttg-aaattgttgtacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgctgtcttgctgtcgtgatgaatat 2397  T
Q  254 gatttactttgatga 268  Q
    |||| ||||||||||    
T  2398 gattgactttgatga 2412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 6359 - 6535
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| |||| |  |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| ||| ||    
T  6359 cagagaggatgaataagatgatt-aataataatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaa 6457  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
     || ||| |||||| |||||||||||||||| ||||| || ||||||||||||| |||| ||||||| |||||||||||    
T  6458 ttg-ttatatatgatgattattattgatggtgacttgctgcatatgtttaaatggtgttgtcttgctattgtgatgaat 6535  T

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Target: scaffold0737; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 6389 - 6474
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| |||||||    
T  6389 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 6474  T

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Target: scaffold0810 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 3136 - 3065
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataa 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  3136 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataa 3065  T

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Target: scaffold0810; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 3063 - 2988
Alignment:
Q  261 tttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  3063 tttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgat 2988  T

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Target: scaffold0100 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 36140 - 36226
Alignment:
Q  250 atatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||||| |||| ||||||    
T  36140 atatgatttactttgatgattaatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatattagatgat 36226  T

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Target: scaffold0075 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 336
Target Start/End: Original strand, 8350 - 8462
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatgg 322  Q
    ||||||| | ||||| ||| ||||||||||||||||||||||||||||||||  ||| |||| |||||||||||| ||||  |||||||||||||||||     
T  8350 aatgatgctgtcttgttgtcgtgatgaatatgatttactttgatgattaatgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatga 8448  T
Q  323 ttgtatttgatgat 336  Q
    ||||||||||||||    
T  8449 ttgtatttgatgat 8462  T

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Target: scaffold0513 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 10961 - 11047
Alignment:
Q  250 atatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||    
T  10961 atatgatttactttgatgatttatgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaatggttgtattagatgat 11047  T

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Target: scaffold0004 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 251 - 336
Target Start/End: Complemental strand, 363033 - 362948
Alignment:
Q  251 tatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||||||  ||||||||||||||||| ||||||| ||||||    
T  363033 tatgatttactttgatgattaatgtgagaatatttatatattttgaaagatgttgatatgaagttgtaatgattgtattagatgat 362948  T

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Target: scaffold0395 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 11055 - 10890
Alignment:
Q  84 attaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacata 183  Q
    |||||||||||| ||| ||| ||||||||  ||| | ||||||||||||| || |||||| |||||||   ||||||||||| ||  || || ||| |||    
T  11055 attaagatgatt-aatgttgatgatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaattg-ttatata 10958  T
Q  184 tgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgatgaat 251  Q
    ||| ||||||||||||| || ||||| || |||||||||||||||||| |||||||||| ||||||||    
T  10957 tgatgattattattgattgtgacttgctgcatatgtttaaatgatgttgtcttgctgttttgatgaat 10890  T

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Target: scaffold0395; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 11036 - 10951
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||| |||||||||| ||| | | |||||||||||||||||||| |  |||||||| || |||| ||| ||| |||||||    
T  11036 atgatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaattgttatatatgatgat 10951  T

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Target: scaffold0124 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 24726 - 24822
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||||||||||||| ||  ||| || |||||||||||| | ||||  ||||||||||||||||| ||||||||||||||    
T  24726 tgttgtgatgaatatgatttactttgatgattattgagagaata-ttatatattgtggatgatgatgatatgaagttgtaatgattgtatttgatgat 24822  T

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Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 21950 - 21994
Alignment:
Q  225 tgatgttttcttgctgttgtgatgaatatgatttactttgatgat 269  Q
    ||||| ||| ||| |||| ||||||||||||||||||||||||||    
T  21950 tgatgcttttttgttgttatgatgaatatgatttactttgatgat 21994  T

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Target: scaffold0815 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 251
Target Start/End: Complemental strand, 608 - 479
Alignment:
Q  121 ttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttacatatgaagattattattgatggttacttgttgtatatgtt 220  Q
    ||||||| ||||| || |||||| |||||||   ||||||||||| ||  || || ||| |||||| |||||||||||||||| ||||| || |||||||    
T  608 ttaaatgagaaaatatttatatattgtgaaagacgttgatatgaaattataattg-ttatatatgatgattattattgatggtgacttgctgcatatgtt 510  T
Q  221 taaatgatgttttcttgctgttgtgatgaat 251  Q
     |||||||||| |||||||||||||||||||    
T  509 aaaatgatgttgtcttgctgttgtgatgaat 479  T

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Target: scaffold0142 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 7720 - 7817
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaaagatgccgatatgaag-ttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||||||||||||| ||  ||| || |||||||||||| | ||||  ||||||||| |||||||| ||||||||||||||    
T  7720 tgttgtgatgaatatgatttactttgatgattattgagagaata-ttatatattgtggatgatgatgatatgaagtttgtaatgattgtatttgatgat 7817  T

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Target: scaffold0061 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 15421 - 15504
Alignment:
Q  86 taagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgc 170  Q
    |||||||||| ||| ||||||||||| ||||| | ||||||||||||| || |||||| |||||||| |||||||||||||||||    
T  15421 taagatgatt-aatgttgttgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgc 15504  T

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Target: scaffold0061; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 24479 - 24562
Alignment:
Q  86 taagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgc 170  Q
    |||||||||| ||| ||||||||||| ||||| | ||||||||||||| || |||||| |||||||| |||||||||||||||||    
T  24479 taagatgatt-aatgttgttgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgc 24562  T

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Target: scaffold0599 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 4)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 73 - 246
Target Start/End: Complemental strand, 4786 - 4615
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| |||| || |||||||| |||| | ||||||||||||| || |||||| |||||||   ||||||||||| |||  |    
T  4786 cagagaggatgaataagatgatt-aataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattg-ta 4689  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtga 246  Q
    || |||| ||||||  ||||||||||||| | ||||| || ||||  || |||| ||||  ||||| |||||||    
T  4688 attgttatatatgattattattattgatgttgacttgatgcatattatttaatggtgttgccttgcggttgtga 4615  T

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Target: scaffold0599; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 246
Target Start/End: Complemental strand, 368 - 197
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaa 172  Q
    |||||||||||| |||||||||| |||| || |||||||| |||| | ||| ||||||||| || |||||| |||||||   ||||||||||| |||  |    
T  368 cagagaggatgaataagatgatt-aataatgatgatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattg-ta 271  T
Q  173 atggttacatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtga 246  Q
    || |||| ||||||  ||||||||||||| | ||||| || ||||  || |||| ||||  ||||| |||||||    
T  270 attgttatatatgattattattattgatgttgacttgatgcatattatttaatggtgttgccttgcggttgtga 197  T

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Target: scaffold0599; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 338 - 256
Alignment:
Q  252 atgatttactttgatgatta-atgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgat 333  Q
    |||||||||||||||||||| |||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| ||||    
T  338 atgatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 256  T

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Target: scaffold0599; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 4756 - 4674
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgat 333  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||||| ||||||| ||| ||| ||||    
T  4756 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 4674  T

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Target: scaffold0434 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 6770 - 6855
Alignment:
Q  252 atgatttactttgatgattaa-tgttagattatttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||| |  |||||| |||||||||| || |||||||||||    
T  6770 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaatgattatatttgatgat 6855  T

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Target: scaffold0192 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 9908 - 9851
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtgaa 297  Q
    ||||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||    
T  9908 tgttgtgatgaatatgatttactttgatgattaatgagagaata-ttatatattgtgaa 9851  T

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Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 77000 - 76946
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||| ||||||    
T  77000 atttatatattgtgaaagatgtggatatgaagttgtaatggttatattggatgat 76946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 3234 - 3140
Alignment:
Q  73 cagagaggatgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttg 169  Q
    ||||||| |||| |||||||||| ||| |||| |||||| ||||| | |||||||||||| ||| ||||||  ||||||| ||||||||||||||||    
T  3234 cagagagtatgaataagatgatt-aatgttgtggatttaagttgatgattaaatgtgaaa-gatttatatatcgtgaaaaatgttgatatgaagttg 3140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 3174 - 3120
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||| |||||| |||  |||||||||||||||||||| |||| ||||||    
T  3174 atttatatatcgtgaaaaatgttgatatgaagttgtaatggttatattggatgat 3120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 2471 - 2525
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||||    
T  2471 atttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgat 2525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 911 - 861
Alignment:
Q  286 atatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||  |||||||||||||||||||| |||| ||||||    
T  911 atatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 59295 - 59458
Alignment:
Q  81 atgattaagatgatttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttgcaaatggttac 180  Q
    |||| |||||||||| ||| |||| |||||| ||||| | |||||||||||| ||| |||||| |||||||  ||||||||||||||||  ||| ||||     
T  59295 atgaataagatgatt-aatgttgtggatttaagttgatgattaaatgtgaaa-gatttatatattgtgaaagatgttgatatgaagttg-taattgttat 59391  T
Q  181 atatgaagattattattgatggttacttgttgtatatgtttaaatgatgttttcttgctgttgtgat 247  Q
    ||  || ||||||| |||||| | ||||| || |||| ||| |||| ||||  |||||||| |||||    
T  59392 attggatgattattgttgatgttgacttgctgcatattttttaatggtgttgccttgctgtcgtgat 59458  T

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Target: scaffold0080; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 59347 - 59401
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||||||  |||||||||||||||| ||| |||| ||||||    
T  59347 atttatatattgtgaaagatgttgatatgaagttgtaattgttatattggatgat 59401  T

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Target: scaffold0080; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 49057 - 49087
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  49057 tgttgtgatgaatatgatttactttgatgat 49087  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 9890 - 9960
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatgttagattatttatatattgtg 295  Q
    ||||||||||| ||  |||||||||||||||||||||| |||||||||||||  ||| || ||||||||||||    
T  9890 aatgatgtttttttattgttgtgatgaatatgatttac-ttgatgattaatgagagaata-ttatatattgtg 9960  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 12864 - 12914
Alignment:
Q  223 aatgatgttttcttgctgttgtgatgaatatgatttactttgatgattaatg 274  Q
    ||||||||| | ||| |||||||||||||||||||||| |||||||||||||    
T  12864 aatgatgttgttttgttgttgtgatgaatatgatttac-ttgatgattaatg 12914  T

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Target: scaffold0802 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 5459 - 5532
Alignment:
Q  95 ttaatattgttgatttacgttgacgtttaaatgtgaaaagatctatataatgtgaaaattgttgatatgaagttg 169  Q
    ||||| |||| |||||| ||||| | |||||||||||| ||| |||||| |||||||  ||||||||||||||||    
T  5459 ttaatgttgtggatttaagttgatgattaaatgtgaaa-gatttatatattgtgaaaggtgttgatatgaagttg 5532  T

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Target: scaffold0802; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 5498 - 5552
Alignment:
Q  282 atttatatattgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||||||||| ||  ||||||||||||||||| || |||| ||||||    
T  5498 atttatatattgtgaaaggtgttgatatgaagttgtaatgtttatattggatgat 5552  T

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Target: scaffold0415 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Complemental strand, 600 - 570
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  600 tgttgtgatgaatatgatttactttgatgat 570  T

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Target: scaffold0229 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 11404 - 11434
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  11404 tgttgtgatgaatatgatttactttgatgat 11434  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 32563 - 32593
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  32563 tgttgtgatgaatatgatttactttgatgat 32593  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 13990 - 14020
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  13990 tgttgtgatgaatatgatttactttgatgat 14020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 35989 - 36019
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  35989 tgttgtgatgaatatgatttactttgatgat 36019  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 269
Target Start/End: Original strand, 189280 - 189310
Alignment:
Q  239 tgttgtgatgaatatgatttactttgatgat 269  Q
    |||||||||||||||||||||||||||||||    
T  189280 tgttgtgatgaatatgatttactttgatgat 189310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 8189 - 8234
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  8189 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 8234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 10029 - 10074
Alignment:
Q  291 ttgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||    
T  10029 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgat 10074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 9106 - 9150
Alignment:
Q  292 tgtgaaagatgccgatatgaagttgtaatggttgtatttgatgat 336  Q
    |||||||||||  |||||||||||||||||||| |||| ||||||    
T  9106 tgtgaaagatgttgatatgaagttgtaatggttatattggatgat 9150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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