View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0655-Insertion-11 (Length: 320)
Name: NF0655-Insertion-11
Description: NF0655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0655-Insertion-11 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 10464569 - 10464873
Alignment:
| Q |
8 |
attacaaatctcatatttcggcatgcaaaaggcatcacgcacgttcttagcatagtctataatgcatgtttctttcattaaaaagaactagtaagtcacc |
107 |
Q |
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| T |
10464569 |
attacaaacctcatattttggcatgcaaa-ggtatcacgcacgttcttagcatagtctataatgcatgtttctttcattaaaaagaactagtaagtcacc |
10464667 |
T |
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| Q |
108 |
aaatcaaagtcataaaattttatattatcttgtatttttaatcgacccagtaagcaacacatactcaaataaatattttcacaacaagagaattgtgaag |
207 |
Q |
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| T |
10464668 |
aaatcatagtcataaaatttcatattatcttgtttttttaatcgacctagtaagcaacacatactcaaataaatattttcacaacaagagaattgtgaag |
10464767 |
T |
|
| Q |
208 |
tctcgggatcagatcgaaaattcacatgaa--atatttttaaaggcaataatacaacaagagcaataatactacgggacatataacatcttcaatcttca |
305 |
Q |
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|||||||||||||||||||||||||||||| |||||||||| ||| | |||| | || | ||||||||||||||||||||||||||||||||| |
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| T |
10464768 |
tctcgggatcagatcgaaaattcacatgaaatatatttttaatggcta----acaa----accact-atactacgggacatataacatcttcaatcttca |
10464858 |
T |
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| Q |
306 |
tacatggtcaataat |
320 |
Q |
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| T |
10464859 |
tacatggtcaataat |
10464873 |
T |
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