View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0655-Insertion-5 (Length: 634)

Name: NF0655-Insertion-5
Description: NF0655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0655-Insertion-5
NF0655-Insertion-5
[»] chr5 (37 HSPs)
chr5 (7-582)||(20633400-20633961)
chr5 (7-582)||(20649496-20650075)
chr5 (400-582)||(12235802-12235990)
chr5 (408-582)||(12712812-12712987)
chr5 (395-582)||(23045300-23045488)
chr5 (408-582)||(12774076-12774251)
chr5 (450-582)||(34258899-34259031)
chr5 (464-573)||(20973781-20973890)
chr5 (459-573)||(40517486-40517600)
chr5 (430-582)||(43523392-43523539)
chr5 (398-582)||(6093393-6093577)
chr5 (459-556)||(15889890-15889987)
chr5 (459-543)||(5909008-5909092)
chr5 (459-582)||(30996277-30996398)
chr5 (499-573)||(10126827-10126901)
chr5 (480-582)||(33862470-33862571)
chr5 (459-543)||(17853606-17853689)
chr5 (499-582)||(18116815-18116892)
chr5 (476-543)||(13402329-13402396)
chr5 (476-582)||(38006758-38006863)
chr5 (500-573)||(42987773-42987846)
chr5 (464-580)||(10833857-10833973)
chr5 (450-582)||(12915120-12915251)
chr5 (459-543)||(28045331-28045415)
chr5 (450-573)||(28569427-28569551)
chr5 (499-546)||(38972578-38972625)
chr5 (476-582)||(2680892-2680997)
chr5 (476-573)||(12447078-12447175)
chr5 (499-556)||(12834889-12834946)
chr5 (499-584)||(41006336-41006421)
chr5 (499-567)||(6369412-6369480)
chr5 (499-574)||(12250668-12250743)
chr5 (459-546)||(18206707-18206794)
chr5 (464-543)||(35194303-35194382)
chr5 (476-582)||(22695189-22695294)
chr5 (464-582)||(27088639-27088756)
chr5 (459-573)||(36579547-36579661)
[»] scaffold0008 (2 HSPs)
scaffold0008 (450-582)||(67396-67528)
scaffold0008 (450-582)||(75239-75371)
[»] chr7 (44 HSPs)
chr7 (450-582)||(30839442-30839574)
chr7 (398-582)||(27062570-27062755)
chr7 (450-582)||(43217935-43218067)
chr7 (476-582)||(31425681-31425787)
chr7 (398-582)||(45886052-45886236)
chr7 (459-583)||(46127449-46127572)
chr7 (499-582)||(26072575-26072658)
chr7 (499-582)||(26096362-26096445)
chr7 (400-582)||(35074093-35074274)
chr7 (400-543)||(10072112-10072256)
chr7 (431-582)||(44845475-44845627)
chr7 (400-582)||(30650254-30650436)
chr7 (459-582)||(38152584-38152707)
chr7 (400-582)||(42908337-42908520)
chr7 (459-565)||(17884916-17885022)
chr7 (476-582)||(37578964-37579069)
chr7 (430-582)||(18683606-18683759)
chr7 (477-582)||(21702381-21702485)
chr7 (459-543)||(37196313-37196397)
chr7 (400-582)||(16865793-16865975)
chr7 (499-582)||(18125515-18125597)
chr7 (499-582)||(29015268-29015351)
chr7 (464-543)||(45709177-45709256)
chr7 (459-543)||(17851549-17851633)
chr7 (499-569)||(23533963-23534033)
chr7 (398-543)||(43507055-43507200)
chr7 (459-573)||(7779691-7779806)
chr7 (476-565)||(17885147-17885236)
chr7 (500-573)||(23475618-23475691)
chr7 (459-543)||(38140115-38140199)
chr7 (459-567)||(41741750-41741858)
chr7 (480-567)||(24752738-24752825)
chr7 (464-543)||(39456304-39456383)
chr7 (480-546)||(21750478-21750544)
chr7 (476-573)||(25905329-25905426)
chr7 (459-556)||(25980236-25980333)
chr7 (459-522)||(33840758-33840821)
chr7 (499-546)||(37103475-37103522)
chr7 (476-543)||(41103344-41103411)
chr7 (499-564)||(16078737-16078802)
chr7 (499-556)||(23328334-23328391)
chr7 (499-564)||(26622676-26622741)
chr7 (464-573)||(44794321-44794430)
chr7 (430-513)||(27062780-27062864)
[»] chr8 (26 HSPs)
chr8 (450-582)||(15174159-15174291)
chr8 (459-582)||(24870310-24870432)
chr8 (400-582)||(24927568-24927750)
chr8 (450-579)||(15068897-15069026)
chr8 (400-582)||(34301441-34301623)
chr8 (459-567)||(20399315-20399423)
chr8 (503-582)||(8030839-8030918)
chr8 (459-582)||(34776141-34776263)
chr8 (398-582)||(32302677-32302862)
chr8 (459-543)||(1063188-1063272)
chr8 (400-582)||(40789186-40789366)
chr8 (476-582)||(17468952-17469057)
chr8 (464-582)||(28977401-28977518)
chr8 (455-556)||(6388877-6388978)
chr8 (476-543)||(11255330-11255397)
chr8 (459-572)||(2076132-2076245)
chr8 (481-565)||(2183948-2184032)
chr8 (476-582)||(4231006-4231111)
chr8 (499-573)||(34139164-34139238)
chr8 (499-564)||(36132219-36132284)
chr8 (499-543)||(39445887-39445931)
chr8 (499-554)||(5700012-5700067)
chr8 (476-526)||(2190224-2190274)
chr8 (499-541)||(17220436-17220478)
chr8 (476-556)||(14687129-14687209)
chr8 (499-543)||(40248667-40248711)
[»] scaffold0015 (1 HSPs)
scaffold0015 (430-579)||(56208-56358)
[»] chr6 (22 HSPs)
chr6 (400-582)||(32853463-32853645)
chr6 (400-582)||(2366945-2367127)
chr6 (400-582)||(3484210-3484392)
chr6 (476-582)||(12309277-12309382)
chr6 (466-582)||(18908557-18908673)
chr6 (399-573)||(10188369-10188544)
chr6 (459-573)||(10142812-10142926)
chr6 (499-582)||(14254679-14254761)
chr6 (459-543)||(5863697-5863781)
chr6 (450-526)||(20611252-20611328)
chr6 (400-543)||(9442268-9442412)
chr6 (450-526)||(9458368-9458444)
chr6 (476-543)||(27534391-27534458)
chr6 (499-582)||(29200194-29200271)
chr6 (459-582)||(32052735-32052857)
chr6 (476-573)||(24225396-24225493)
chr6 (499-555)||(14244967-14245023)
chr6 (499-556)||(32959589-32959646)
chr6 (499-543)||(253146-253190)
chr6 (464-544)||(11762130-11762210)
chr6 (459-543)||(12141076-12141160)
chr6 (499-543)||(30815970-30816014)
[»] chr1 (34 HSPs)
chr1 (450-582)||(35077496-35077622)
chr1 (399-582)||(24710476-24710659)
chr1 (499-582)||(17516119-17516202)
chr1 (476-582)||(34610770-34610875)
chr1 (459-573)||(36187517-36187631)
chr1 (450-582)||(19892621-19892753)
chr1 (399-582)||(20774250-20774433)
chr1 (499-582)||(16237612-16237695)
chr1 (499-582)||(10450368-10450452)
chr1 (476-556)||(32594592-32594672)
chr1 (503-582)||(48024554-48024633)
chr1 (476-573)||(13020383-13020480)
chr1 (500-557)||(14902807-14902863)
chr1 (459-556)||(40087770-40087867)
chr1 (476-543)||(19572820-19572887)
chr1 (459-582)||(28297612-28297734)
chr1 (476-582)||(29936113-29936218)
chr1 (469-543)||(33293874-33293947)
chr1 (459-565)||(50426958-50427063)
chr1 (478-543)||(34060345-34060410)
chr1 (499-543)||(17092285-17092329)
chr1 (459-543)||(23493650-23493734)
chr1 (459-543)||(23966537-23966621)
chr1 (506-574)||(37032047-37032115)
chr1 (456-519)||(7997312-7997375)
chr1 (476-543)||(13390151-13390218)
chr1 (459-582)||(29871572-29871693)
chr1 (459-520)||(5180730-5180791)
chr1 (476-573)||(24237056-24237153)
chr1 (459-535)||(3628308-3628384)
chr1 (459-519)||(17134626-17134686)
chr1 (459-543)||(35937142-35937226)
chr1 (459-543)||(38686332-38686416)
chr1 (459-546)||(44792684-44792772)
[»] chr2 (31 HSPs)
chr2 (450-582)||(26755404-26755536)
chr2 (390-582)||(13830345-13830537)
chr2 (400-582)||(10208717-10208899)
chr2 (399-582)||(4427522-4427707)
chr2 (449-582)||(24051924-24052055)
chr2 (464-543)||(37473055-37473134)
chr2 (476-582)||(24414419-24414524)
chr2 (450-582)||(38342831-38342963)
chr2 (502-582)||(45115303-45115382)
chr2 (430-584)||(3546790-3546944)
chr2 (459-582)||(37999164-37999286)
chr2 (476-582)||(30846641-30846746)
chr2 (499-577)||(44057573-44057651)
chr2 (500-577)||(42576312-42576389)
chr2 (499-582)||(45256543-45256625)
chr2 (450-544)||(18485309-18485403)
chr2 (469-582)||(6028175-6028288)
chr2 (459-543)||(8916261-8916345)
chr2 (399-522)||(10920281-10920405)
chr2 (476-543)||(9632094-9632161)
chr2 (459-582)||(36128395-36128517)
chr2 (476-582)||(13705649-13705754)
chr2 (499-556)||(16105343-16105400)
chr2 (453-556)||(29657107-29657210)
chr2 (465-556)||(42995466-42995557)
chr2 (476-522)||(35964975-35965021)
chr2 (469-526)||(17845784-17845841)
chr2 (499-543)||(7314975-7315019)
chr2 (459-543)||(18106404-18106488)
chr2 (499-543)||(37106425-37106469)
chr2 (499-543)||(44746426-44746470)
[»] scaffold0189 (1 HSPs)
scaffold0189 (459-582)||(3937-4059)
[»] chr4 (44 HSPs)
chr4 (400-582)||(21544181-21544364)
chr4 (398-582)||(10574736-10574921)
chr4 (430-582)||(14606217-14606370)
chr4 (459-543)||(44317229-44317313)
chr4 (400-582)||(568019-568202)
chr4 (476-582)||(11027774-11027879)
chr4 (476-582)||(11172647-11172753)
chr4 (459-573)||(37348808-37348922)
chr4 (459-556)||(4766628-4766725)
chr4 (476-580)||(30672652-30672755)
chr4 (450-582)||(41915275-41915407)
chr4 (459-582)||(6382562-6382684)
chr4 (459-582)||(7608655-7608777)
chr4 (459-548)||(15987550-15987639)
chr4 (400-540)||(43309092-43309233)
chr4 (459-543)||(48459171-48459255)
chr4 (459-582)||(1724598-1724720)
chr4 (397-559)||(11123177-11123340)
chr4 (499-582)||(15733828-15733911)
chr4 (499-582)||(55826911-55826993)
chr4 (459-579)||(16216964-16217078)
chr4 (459-543)||(31918886-31918970)
chr4 (400-582)||(47103341-47103517)
chr4 (499-582)||(1866896-1866979)
chr4 (459-582)||(21423546-21423668)
chr4 (499-582)||(29527511-29527594)
chr4 (499-582)||(31782319-31782402)
chr4 (500-562)||(37107138-37107200)
chr4 (459-573)||(47550649-47550763)
chr4 (398-582)||(5902902-5903086)
chr4 (459-540)||(43892196-43892277)
chr4 (499-586)||(9230007-9230094)
chr4 (499-582)||(18423293-18423376)
chr4 (499-582)||(32585213-32585296)
chr4 (476-543)||(53906602-53906669)
chr4 (499-565)||(42774486-42774551)
chr4 (499-556)||(8844156-8844213)
chr4 (499-556)||(8857120-8857177)
chr4 (499-556)||(30034361-30034418)
chr4 (499-576)||(31416228-31416305)
chr4 (499-567)||(4652424-4652492)
chr4 (464-556)||(12076002-12076093)
chr4 (459-543)||(26564516-26564600)
chr4 (499-543)||(42907533-42907577)
[»] chr3 (31 HSPs)
chr3 (451-582)||(2487442-2487573)
chr3 (459-582)||(17146437-17146559)
chr3 (450-582)||(23329831-23329963)
chr3 (480-582)||(40796446-40796548)
chr3 (459-565)||(44107102-44107208)
chr3 (396-582)||(7470065-7470250)
chr3 (459-543)||(39728361-39728445)
chr3 (459-582)||(44179006-44179128)
chr3 (459-565)||(44252420-44252526)
chr3 (476-556)||(34154112-34154192)
chr3 (476-543)||(22536169-22536236)
chr3 (459-573)||(44638954-44639068)
chr3 (459-582)||(29284014-29284137)
chr3 (459-543)||(41937374-41937458)
chr3 (459-539)||(52572293-52572373)
chr3 (459-582)||(31127082-31127204)
chr3 (499-582)||(44953722-44953804)
chr3 (450-556)||(1772728-1772834)
chr3 (499-543)||(29842026-29842070)
chr3 (459-543)||(39655588-39655672)
chr3 (459-543)||(48391135-48391219)
chr3 (499-567)||(49579783-49579851)
chr3 (459-582)||(4557592-4557714)
chr3 (476-543)||(23154332-23154399)
chr3 (459-582)||(49025361-49025482)
chr3 (459-562)||(55438986-55439088)
chr3 (499-573)||(53631620-53631694)
chr3 (476-582)||(23547259-23547370)
chr3 (499-556)||(34025678-34025735)
chr3 (464-573)||(48306831-48306940)
chr3 (499-572)||(52197871-52197944)
[»] scaffold0005 (1 HSPs)
scaffold0005 (430-582)||(211008-211161)
[»] scaffold0294 (1 HSPs)
scaffold0294 (459-567)||(14456-14564)
[»] scaffold0059 (1 HSPs)
scaffold0059 (450-582)||(69740-69872)
[»] scaffold0519 (1 HSPs)
scaffold0519 (476-543)||(9998-10065)
[»] scaffold0013 (2 HSPs)
scaffold0013 (450-582)||(105780-105912)
scaffold0013 (499-575)||(128406-128482)
[»] scaffold0036 (1 HSPs)
scaffold0036 (459-582)||(33074-33196)
[»] scaffold0014 (1 HSPs)
scaffold0014 (459-582)||(14432-14553)
[»] scaffold0095 (1 HSPs)
scaffold0095 (499-543)||(32849-32893)
[»] scaffold0135 (1 HSPs)
scaffold0135 (499-586)||(35873-35960)
[»] scaffold1630 (1 HSPs)
scaffold1630 (499-539)||(1342-1382)
[»] scaffold0022 (1 HSPs)
scaffold0022 (459-543)||(90276-90360)


Alignment Details
Target: chr5 (Bit Score: 416; Significance: 0; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 7 - 582
Target Start/End: Original strand, 20633400 - 20633961
Alignment:
Q  7 agttcagatgtgttagaaccacaattgagaactatattttctgaggggacatagctagtattgtcagcattaactaatatgtgtaaaatgtttgagaaaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||        ||  ||||| ||||||||||||||||||    
T  20633400 agttcagatgtgttagaaccacaattgagaactatattttctgaggggacatagcta----tgt--------ac--atatg-gtaaaatgtttgagaaaa 20633484  T
Q  107 atatgtacataacgaagcatgtgatagcattcatgaatttatgtaacatttttgtatctaaattgtttcttagattggtaaataaaatgagcttgtaaac 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20633485 atatgtacataacaaagcatgtgatagcattcatgaatttatgtaacatttttgtatctaaattgtttcttagattggtaaataaaatgagcttgtaaac 20633584  T
Q  207 tttttatgtcgggcttctttataactttttcagtagcatctaataataatttcgtggaaaatgtatactttatctcacttgtcggtaataaaatcgtgca 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20633585 tttttatgtcgggcttctttataactttttcagtagcatctaataataatttcgtggaaaatgtatactttatctcacttgtcggtaataaaatcgtgca 20633684  T
Q  307 tatcgtttaatttgatgcagacatataggaatcctatgagataatatttggttcacatattttaaagtaacaaacttatcggccccttaagattaggcat 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20633685 tatcgtttaatttgatgcagacatataggaatcctatgagataatatttggttcacatattttaaagtaacaaacttatcggcccctcaagattaggcat 20633784  T
Q  407 cgcaatgggacggggtggaaaccggttttgccttcctcat-cttatcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgaga 505  Q
    ||||||||| |||||||| ||| ||||||| ||| ||||| || |||||||| | || |||||||| | |||| |||| || || ||||||||||||| |    
T  20633785 cgcaatggggcggggtgggaacgggttttgtctttctcatcctcatcccctattttcatatatttatccattatcctatccatattcaactgcgatgaaa 20633884  T
Q  506 aattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  20633885 aattgaatctcatccccgtccccgatgggttcgggtattcctgcatcatccccgtccccgcagtgaatcaatttttt 20633961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 7 - 582
Target Start/End: Original strand, 20649496 - 20650075
Alignment:
Q  7 agttcagatgtgttagaaccacaattgagaactatattttctgaggggacatagctagtattgtcagcattaactaatatgtgtaaaatgtttgagaaaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||        ||  ||||| ||||||||||||||||||    
T  20649496 agttcagatgtgttagaaccacaattgagaactatattttctgaggggacatagcta----tgt--------ac--atatg-gtaaaatgtttgagaaaa 20649580  T
Q  107 atatgtacataacgaagcatgtgatagcattcatgaatttatgtaacatttttgtatctaaattgtttcttagattggtaaataaaatgagcttgtaaac 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20649581 atatgtacataacaaagcatgtgatagcattcatgaatttatgtaacatttttgtatctaaattgtttcttagattggtaaataaaatgagcttgtaaac 20649680  T
Q  207 tttttatgtcgggcttctttataactttttcagta------------------gcatctaataataatttcgtggaaaatgtatactttatctcacttgt 288  Q
    ||||||||| |||||||||||||||||||||||||                  | ||||||||| |||||||||||||||||||||||||||||||||||    
T  20649681 tttttatgttgggcttctttataactttttcagtacgtgttgaatttccgatagaatctaataacaatttcgtggaaaatgtatactttatctcacttgt 20649780  T
Q  289 cggtaataaaatcgtgcatatcgtttaatttgatgcagacatataggaatcctatgagataatatttggttcacatattttaaagtaacaaacttatcgg 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20649781 cggtaataaaatcgtgcatatcgtttaatttgatgcagacatataggaatcctatgagataatatttggttcacatattttaaagtaacaaacttatcgg 20649880  T
Q  389 ccccttaagattaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatc-ttatcccctactctcgtatatttacctattaccctacccg 487  Q
    ||||| ||||||||||||||||||||| |||||| | ||| ||||||| ||| |||||| | |||||||| | || |||||||| | |||| |||| ||     
T  20649881 cccctcaagattaggcatcgcaatggggcggggttggaacgggttttgtctttctcatcatcatcccctattttcatatatttatccattatcctatcca 20649980  T
Q  488 tactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    || ||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  20649981 tattcaactgcgatgaaaaattgaatctcatccccgtccccgatgggttcgggtattcctgcatcatccccgtccccgcagtgaatcaatttttt 20650075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 12235802 - 12235990
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatct-tatcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| |||||||| ||| ||||||||||||| ||||  |||||||||||| | ||||||||||  ||||||||||| ||  |||  |     
T  12235802 taggcatggcaatggggcggggtgggaacgggttttgccttccccatccctatcccctactcccatatatttacccgttaccctacccatatccaaaggg 12235901  T
Q  499 gatgagaaattgaatctcatcccc-----atcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||| ||||||||||||||||||     |||| | |||||||||||||| || ||||||||| |||||||||| ||||||||||||||    
T  12235902 gatgaaaaattgaatctcatcccctccccatccccaatgggttcgggtatacccgcctcatccccgtccccgcactgaatcaatttttt 12235990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 408 - 582
Target Start/End: Complemental strand, 12712987 - 12712812
Alignment:
Q  408 gcaatgggacggggtggaaaccggttttgccttcctcatcttatcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaa 507  Q
    |||||||| ||||||||  || ||||||| ||||| |||| |||||||||||| | |||| |||||  ||||||||||| ||  | || | ||| |||||    
T  12712987 gcaatggggcggggtggggacgggttttgtcttccccatcctatcccctactcccatatacttacccgttaccctacccatatccgacggggataagaaa 12712888  T
Q  508 ttgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatc-aatttttt 582  Q
    ||||||||||||| | ||| | ||||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  12712887 ttgaatctcatcctcgtccccaatgggttcgggtattcctgcctcatccccgtccccgtagtgaatctaatttttt 12712812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 395 - 582
Target Start/End: Complemental strand, 23045488 - 23045300
Alignment:
Q  395 aagattaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactca 493  Q
    |||||||||||| | |||||| ||||||||  || ||||||| ||||| ||||   ||||||||||| | |||| |||||  ||||||||||| ||  ||    
T  23045488 aagattaggcatggtaatggggcggggtggggacgggttttgtcttccccatccccatcccctactcccatatacttacccgttaccctacccatatcca 23045389  T
Q  494 actgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    || | |||||||||||||||| ||||||| ||| | ||||||||||||||||| ||| ||||| | |||||||| || |||||||||||    
T  23045388 acggggatgagaaattgaatcccatccccgtccccaatgggttcgggtattcccgccccatccccatccccgcaatggatcaatttttt 23045300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 408 - 582
Target Start/End: Complemental strand, 12774251 - 12774076
Alignment:
Q  408 gcaatgggacggggtggaaaccggttttgccttcctcatcttatcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaa 507  Q
    |||||||| ||||||||  || ||||||| ||||| |||| |||||| ||||| | |||| |||||  ||||||||||| ||| | || | ||| |||||    
T  12774251 gcaatggggcggggtggggacgggttttgtcttccccatcctatcccttactcccatatacttacccgttaccctacccatacccgacggggataagaaa 12774152  T
Q  508 ttgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatc-aatttttt 582  Q
    ||||||||||||| | ||| | ||||||||||||||||| ||||||||| ||||| || |||||||| ||||||||    
T  12774151 ttgaatctcatcctcgtccccaatgggttcgggtattcccgcctcatccccgtcctcgtagtgaatctaatttttt 12774076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 450 - 582
Target Start/End: Original strand, 34258899 - 34259031
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||||| |||| |||| | ||||||||||| || |||||   ||||||||||| |||| ||||||| ||| | ||||||||||||||||| ||    
T  34258899 atcccctactctcatatacttacttgttaccctacccatattcaacgaggatgagaaattaaatcacatccccgtccccaatgggttcgggtattcccgc 34258998  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||  ||| ||||||| |||||||||||||    
T  34258999 ctcatctccgttcccgcagggaatcaatttttt 34259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 573
Target Start/End: Complemental strand, 20973890 - 20973781
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccc 563  Q
    |||| |||||| ||||||||||| ||  |||| | |||||||||||||||||||||||| | | ||| |||||||||||| |||||| ||||| ||||||    
T  20973890 tatacttacctgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtacccgacgggttcgggtatccctgccccatccccgtccc 20973791  T
Q  564 cgcagtgaat 573  Q
    |||| |||||    
T  20973790 cgcattgaat 20973781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 573
Target Start/End: Original strand, 40517486 - 40517600
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||| ||||||||||| ||| |||| | |||||||||||||||||||||||| ||| ||  |||||||||||| || ||| |||||      
T  40517486 tctcatatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccggcgggttcgggtatccccgccccatccct 40517585  T
Q  559 gtccccgcagtgaat 573  Q
    ||||||||| |||||    
T  40517586 gtccccgcattgaat 40517600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 430 - 582
Target Start/End: Original strand, 43523392 - 43523539
Alignment:
Q  430 ggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctc 528  Q
    ||||||||||||| ||||   ||||||||||| | | |||||| |  ||||| ||||| |||||||  | |||||||||||||||||||||||||         
T  43523392 ggttttgccttccccatccccatcccctactcccatgtatttatccgttaccatacccatactcaagggggatgagaaattgaatctcatcccca----- 43523486  T
Q  529 gatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
     |||||||||||||||||  |||||||| |||||||||||||||| ||| ||||    
T  43523487 -atgggttcgggtattcccacctcatccccgtccccgcagtgaattaatatttt 43523539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 582
Target Start/End: Complemental strand, 6093577 - 6093393
Alignment:
Q  398 attaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaact 496  Q
    ||||||||| |||||||| |||| |||  || ||||||  ||||| |||||| || ||| | |||| |||| |||| | ||||||||||| ||  ||||     
T  6093577 attaggcatggcaatggggcgggatggggacgggttttatcttccccatcttcatacccgattctcatatacttacttgttaccctacccatatccaacg 6093478  T
Q  497 gcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | ||||||||||||||||  |||||| ||| ||| |||||||| ||| || ||||||||| |||||||||| ||||| ||||||||    
T  6093477 gggatgagaaattgaatcctatccccgtccccgacgggttcggatatccccgcctcatccccgtccccgcattgaat-aatttttt 6093393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 556
Target Start/End: Original strand, 15889890 - 15889987
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    |||| |||| |||||| ||||||||||| |||  ||| | |||||||||||||||||||||||| ||| ||| |||||||||||| |||||| |||||    
T  15889890 tctcatatacttacctgttaccctacccatacctaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtatccctgccccatcc 15889987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 5909092 - 5909008
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  ||||||||||||||| |||| | |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  5909092 tctcatatacttacccgttaccctacccgtacccaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 5909008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 30996277 - 30996398
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| ||||||||||| ||||| ||||  || ||||| | |||||||||||||||||||||||| ||| ||| || ||||||||| |||||| ||||  |    
T  30996277 tctcatatatttacctgttaccttacctatattcaacgg-gatgagaaattgaatctcatccccgtccccgacggattcgggtatccctgccccatctcc 30996375  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  30996376 gtccccgcattgaat-aatttttt 30996398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 573
Target Start/End: Original strand, 10126827 - 10126901
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    |||||||||||||||||||||||| ||  ||| ||||| |||||| || |||||||||||||||||||| |||||    
T  10126827 gatgagaaattgaatctcatccccgtctccgacgggtttgggtatccccgcctcatcctcgtccccgcattgaat 10126901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 582
Target Start/End: Complemental strand, 33862571 - 33862470
Alignment:
Q  480 cctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaattt 579  Q
    ||||||| || ||||| | |||||||||||||| ||||||||| ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||| |||||    
T  33862571 cctacccatattcaacggggatgagaaattgaacctcatccccgtccccgacgggttcgggtatccccgccccatccccgtccccgcattgaat-aattt 33862473  T
Q  580 ttt 582  Q
    |||    
T  33862472 ttt 33862470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 17853689 - 17853606
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||| ||||||||||| ||| |||| | |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  17853689 tctcatatacttacctgttaccctacccatacccaacgg-gatgagaaattgaatctcatccccgtccccgacgggttcgggtat 17853606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 18116892 - 18116815
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||||      |||||||||||||||||  |||||||| |||||||||||||||| ||| ||||    
T  18116892 gatgagaaattgaatctcatcccca------atgggttcgggtattcccacctcatccccgtccccgcagtgaattaatatttt 18116815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 543
Target Start/End: Complemental strand, 13402396 - 13402329
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||||  ||| |||| | |||||||||||||||||||||||| ||| ||||||||||||||||    
T  13402396 ttaccctacctatacccaacggggatgagaaattgaatctcatccccgtccccgatgggttcgggtat 13402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 582
Target Start/End: Complemental strand, 38006863 - 38006758
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||| |||| | |||||||||||||| | ||| ||| ||| ||||||||| |||||| || ||| ||||| |||||||||| ||||| |    
T  38006863 ttaccctacccatacccaacggggatgagaaattgaaccccatacccgtccccgatgggtttgggtatccccgccccatccccgtccccgcattgaat-a 38006765  T
Q  576 atttttt 582  Q
    |||||||    
T  38006764 atttttt 38006758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 573
Target Start/End: Complemental strand, 42987846 - 42987773
Alignment:
Q  500 atgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    ||||||||||||||||||||||| | | ||| |||||||||||| |  ||| |||||||||||||||| |||||    
T  42987846 atgagaaattgaatctcatccccgttcccgacgggttcgggtatcctcgccccatcctcgtccccgcattgaat 42987773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 580
Target Start/End: Original strand, 10833857 - 10833973
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccc 563  Q
    |||| |||||| ||||||||||| ||||||||    |||||||||| |||||||||||| ||  | ||||||||||||||||  ||| ||||| | || |    
T  10833857 tatacttacctgttaccctacccatactcaacgagaatgagaaattaaatctcatccccgtctccaatgggttcgggtattctcgccccatccccatctc 10833956  T
Q  564 cgcagtgaatcaatttt 580  Q
    |  ||||||||||||||    
T  10833957 cagagtgaatcaatttt 10833973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 582
Target Start/End: Original strand, 12915120 - 12915251
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    |||| |||||||| |||| |||||  |||||||| || ||  |||| | |||| |||||||||||  ||| |||| | | ||||||||||||||||| ||    
T  12915120 atcctctactctcatatacttacccgttaccctatccatatccaacggggatgcgaaattgaatcgtatctccattcccaatgggttcgggtattcccgc 12915219  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | |||||| ||||| |||||||||||| |||||    
T  12915220 cccatcct-gtccctgcagtgaatcaacttttt 12915251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 28045331 - 28045415
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||| ||||||||||| |||||||| | ||||||||||||||| |||| | | ||| ||| ||||||||||||    
T  28045331 tctcatatacttacctgttaccctacccatactcaacggggatgagaaattgaatttcattctcgtccccgacgggttcgggtat 28045415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 573
Target Start/End: Complemental strand, 28569551 - 28569427
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttc-gggtattcctg 548  Q
    |||| |||||| |||||| |||| | ||||||||| | ||| |||| | |||||||||||||||| ||||||| ||| | |||||||| ||||||||| |    
T  28569551 atccactactcccgtatacttacatgttaccctactcatacccaacggagatgagaaattgaatcccatccccgtccccaatgggttcggggtattcccg 28569452  T
Q  549 cctcatcctcgtccccgcagtgaat 573  Q
    || ||||| |||  ||||| |||||    
T  28569451 ccccatccccgtatccgcaatgaat 28569427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 546
Target Start/End: Original strand, 38972578 - 38972625
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcc 546  Q
    |||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  38972578 gatgagaaatcgaatcacatccccgtcctcgatgggttcgggtattcc 38972625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 2680892 - 2680997
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||  |||| | ||||| |||||||||| ||||| ||||| | |||||||||||||||||  || ||||| ||| || | |||||||||    
T  2680892 ttaccctacccatatccaacggagatga-aaattgaatcacatcctcatccccaatgggttcgggtattccctccccatccccgttcctgtagtgaatca 2680990  T
Q  576 atttttt 582  Q
    |||||||    
T  2680991 atttttt 2680997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 573
Target Start/End: Original strand, 12447078 - 12447175
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    ||||| ||||| ||| |||| | ||||||||| |||| | ||||||| ||||||||||||||  |||| || ||| ||||| |||||||||| |||||    
T  12447078 ttaccttacccatacccaacggggatgagaaaatgaaccccatccccgtcctcgatgggttcaagtatccccgccccatccccgtccccgcattgaat 12447175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 556
Target Start/End: Complemental strand, 12834946 - 12834889
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    ||||||||||||||||||||| || ||| |||||||||||||||| || ||| |||||    
T  12834946 gatgagaaattgaatctcatctccgtccccgatgggttcgggtatccccgccccatcc 12834889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 584
Target Start/End: Original strand, 41006336 - 41006421
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaattttttga 584  Q
    ||||| ||||||| | ||||| ||||  ||||||||||||| ||| |  ||||||| | |||||| ||||||||||||||||||||    
T  41006336 gatgaaaaattgattttcatctccattttcgatgggttcggatatccaagcctcattcccgtccctgcagtgaatcaattttttga 41006421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 567
Target Start/End: Original strand, 6369412 - 6369480
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgca 567  Q
    ||||||||||| |||||||||||| | |  ||||||||||||||| || ||||||||| | ||||||||    
T  6369412 gatgagaaattaaatctcatccccgttcctgatgggttcgggtatccccgcctcatccccatccccgca 6369480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 574
Target Start/End: Original strand, 12250668 - 12250743
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatc 574  Q
    |||||||||||||||| ||||||| ||| | |||||||| ||||||||  || ||| | |||||||| ||||||||    
T  12250668 gatgagaaattgaatcccatccccgtccccaatgggttcaggtattcccaccacattcccgtccccgtagtgaatc 12250743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 546
Target Start/End: Original strand, 18206707 - 18206794
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcc 546  Q
    |||| |||| |||||| |||| |||||| ||| |||| | ||||||| || ||| | ||||||||||| ||||||||| |||||||||    
T  18206707 tctcatatacttacctgttactctacccatacccaacggggatgagatatggaaccccatccccatccccgatgggtttgggtattcc 18206794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 543
Target Start/End: Complemental strand, 35194382 - 35194303
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||||| ||||||||||| || ||||| | ||| |||||||||| | ||||||||||| ||| ||||| ||||||    
T  35194382 tatacttacctgttaccctacccatattcaacggagataagaaattgaaccacatccccatccccgacgggtttgggtat 35194303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 582
Target Start/End: Complemental strand, 22695294 - 22695189
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||| |||  | |||||||||||||||| ||||||| |   ||| |||||||||||| || ||| ||||| ||||| |||| ||||| |    
T  22695294 ttaccctacccatacccaatggggatgagaaattgaatcccatccccgtttccgacgggttcgggtatccccgccccatccccgtcctcgcattgaat-a 22695196  T
Q  576 atttttt 582  Q
    |||||||    
T  22695195 atttttt 22695189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 582
Target Start/End: Complemental strand, 27088756 - 27088639
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccc 563  Q
    ||||||||||  ||||||||||| ||  |||| | |||| ||||||||| ||||||||| ||| |||  | || |||||| || ||| ||||||| ||||    
T  27088756 tatatttacccgttaccctacccatatccaacggggatgggaaattgaacctcatccccgtccccgactgatttgggtatccccgccccatcctcatccc 27088657  T
Q  564 cgcagtgaatcaatttttt 582  Q
    |||| ||||| ||||||||    
T  27088656 cgcattgaat-aatttttt 27088639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 573
Target Start/End: Complemental strand, 36579661 - 36579547
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||| | ||||||||||| ||| |||| | ||||||||||||||||||||| || ||||  |  ||||||||||| ||  || ||||| |    
T  36579661 tctcatatacttacatgttaccctacccatacccaacggggatgagaaattgaatctcatctccgtcctaaacaggttcgggtatccccaccccatcccc 36579562  T
Q  559 gtccccgcagtgaat 573  Q
    || | ||||||||||    
T  36579561 gtacacgcagtgaat 36579547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 450 - 582
Target Start/End: Original strand, 67396 - 67528
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||  | ||||||||||| ||||||||||| || ||||  | |||||||||||||||||||||||||| | | |||||||||||||  || ||    
T  67396 atcccctactgccatatatttacctgttaccctacccatattcaatggggatgagaaattgaatctcatccccattcccaatgggttcgggtaaacccgc 67495  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||| |||||||||||||||||||||||||    
T  67496 ctcatccccgtccccgcagtgaatcaatttttt 67528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 450 - 582
Target Start/End: Original strand, 75239 - 75371
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||  | ||||||||||| ||||||||||| || ||||  | |||||||||||||||||||||||||| | | |||||||||||||  || ||    
T  75239 atcccctactgccatatatttacctgttaccctacccatattcaatggggatgagaaattgaatctcatccccattcccaatgggttcgggtaaacccgc 75338  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||| |||||||||||||||||||||||||    
T  75339 ctcatccccgtccccgcagtgaatcaatttttt 75371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 450 - 582
Target Start/End: Complemental strand, 30839574 - 30839442
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||| | |||| |||| | |||||||| |  |||||||| | |||||||||||||||||||||||| ||| | |||||||||||||||||  |    
T  30839574 atcccctactcccatatacttacttgttaccctaacaatactcaacggggatgagaaattgaatctcatccccgtccccaatgggttcgggtattccccc 30839475  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||| |||||||||||||||||||||||||||    
T  30839474 ctcattctcgtccccgcagtgaatcaatttttt 30839442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 398 - 582
Target Start/End: Complemental strand, 27062755 - 27062570
Alignment:
Q  398 attaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctta-tcccctactctcgtatatttacctattaccctacccgtactcaact 496  Q
    ||||||||| || ||||| ||||||||  || ||||||||||||||||||    |||||||||||| |||| ||||   ||| ||||||| ||  ||||     
T  27062755 attaggcatggcgatggggcggggtggggacgggttttgccttcctcatccccgtcccctactctcatatacttactcgttatcctacccatatccaacg 27062656  T
Q  497 gcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | ||||| |||| ||||||||||||| ||| | ||||||||||||||| | ||| ||||| |||||||| ||||||||||||||||    
T  27062655 gggatgacaaatagaatctcatccccgtccccaatgggttcgggtatttccgccccatccccgtccccgaagtgaatcaatttttt 27062570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 450 - 582
Target Start/End: Original strand, 43217935 - 43218067
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    |||||||||| || |||| |||| | ||||||||||| ||   ||| | ||||||||||||||||||||| || ||| | ||||||||||||||||| ||    
T  43217935 atcccctactttcatatacttacttgttaccctacccatatctaacggagatgagaaattgaatctcatctccgtccccaatgggttcgggtattcccgc 43218034  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||| || || |||||||||||||||||||    
T  43218035 ctcatccccgcccacgcagtgaatcaatttttt 43218067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 31425681 - 31425787
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||| |||| | |||||||||||||||||||||||||||| | || ||||| ||||||||  |||||||| ||||| ||||||||||||    
T  31425681 ttaccctacccatacacaacggggatgagaaattgaatctcatccccatccccaataggttcaggtattccctcctcatccccgtcctcgcagtgaatca 31425780  T
Q  576 atttttt 582  Q
    | |||||    
T  31425781 aattttt 31425787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 582
Target Start/End: Complemental strand, 45886236 - 45886052
Alignment:
Q  398 attaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaact 496  Q
    ||||||||| |||||||| ||||||||| |  |||||| |||||| | |||  || ||| | |||| |||| |||||| ||||||||||| ||  ||||     
T  45886236 attaggcatggcaatggggcggggtggagatgggttttaccttccccgtctccatacccaattctcatatacttacctgttaccctacccatatccaacg 45886137  T
Q  497 gcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | |||||||||||||||||||||||| ||| ||| |||||||||||| || ||| ||||  |||||||||| ||||| ||||||||    
T  45886136 gggatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatcaccgtccccgcattgaat-aatttttt 45886052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 583
Target Start/End: Complemental strand, 46127572 - 46127449
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||| |||||||| ||  | ||||| | |||||||||||||| ||||||||||||| |||||||||| |||||||| ||| ||||| |    
T  46127572 tctcatatacttacctgttaccctatccacattcaacggggatgagaaattgaacctcatccccatccccgatgggttcaggtattcccgccccatcccc 46127473  T
Q  559 gtccccgcagtgaatcaattttttg 583  Q
    ||||||||| ||||| |||||||||    
T  46127472 gtccccgcattgaat-aattttttg 46127449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 26072575 - 26072658
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||  | ||||||||||||| ||| ||||||||| | |||||||||||||||||||||||    
T  26072575 gatgagaaattgaatctcatccccgtctccaatgggttcgggtaatcccgcctcatccccttccccgcagtgaatcaatttttt 26072658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 26096362 - 26096445
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||  | ||||||||||||| ||| ||||||||| | |||||||||||||||||||||||    
T  26096362 gatgagaaattgaatctcatccccgtctccaatgggttcgggtaatcccgcctcatccccttccccgcagtgaatcaatttttt 26096445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 35074093 - 35074274
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatcttatcccctactctcgtatatttacctattaccctacccgtactcaactgcg 499  Q
    ||||||| |||||||| ||||||||  || |||||| |||||| | |   || ||| | |||| |||| |||||  ||||||||||| ||| |||| | |    
T  35074093 taggcatggcaatggggcggggtggggacgggttttaccttccccgttccatacccgattctcatatacttacccgttaccctacccatacccaacgggg 35074192  T
Q  500 atgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||| ||| ||| |||||||||||| || ||| |||||||||||||||| ||||| ||||||||    
T  35074193 atgagaaatcgaatcccatccccgtccccgacgggttcgggtatccccgccccatcctcgtccccgcattgaat-aatttttt 35074274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 543
Target Start/End: Original strand, 10072112 - 10072256
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| |||||||| ||| |||||| |||||| ||||   || ||| | |||| |||| |||||| ||||||||||| ||| |||| |     
T  10072112 taggcatggcaatggggcggggtgggaacgggttttaccttccccatccccatacccgattctcatatacttacctgttaccctacccatacccaacagg 10072211  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||||| | ||| ||| ||||||||||||    
T  10072212 gatgagaaattgaatctcatcctcgtccccgacgggttcgggtat 10072256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 431 - 582
Target Start/End: Complemental strand, 44845627 - 44845475
Alignment:
Q  431 gttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcg 529  Q
    ||||||| ||||||||||  || ||||||||   |||| |||| | |||||||| || ||  |||| | |||||||||||||||| |||||||||||||     
T  44845627 gttttgcattcctcatctccattccctactccaatatacttacatgttaccctaaccatatccaacggagatgagaaattgaatcgcatccccatcctca 44845528  T
Q  530 atgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||| ||| |||||| | ||||||||  |||||||| ||||||||||||||||    
T  44845527 atggattcaggtatttccgcctcatctccgtccccgtagtgaatcaatttttt 44845475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 30650254 - 30650436
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| ||||| ||  || |||||| |||||| |||||  || ||| | |||| |||| |||||  ||||||||||| ||  |||| |     
T  30650254 taggcatggcaatggggcggggaggggacgggttttaccttccccatctccatacccgattctcatatacttacccgttaccctacccatatccaacggg 30650353  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||| || ||| ||||  |||||||||| ||||| ||||||||    
T  30650354 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatcaccgtccccgcattgaat-aatttttt 30650436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 38152584 - 38152707
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| |||||||| | |||||||||||||||| ||||||| ||| ||||||||| |||||| || ||| ||||| |    
T  38152584 tctcatatacttacccgttaccctacccatactcaacggggatgagaaattgaatcccatccccgtccccgatgggtttgggtatccccgccccatcccc 38152683  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||| ||| |||||  |||||||    
T  38152684 gtcccggcattgaatatatttttt 38152707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 582
Target Start/End: Complemental strand, 42908520 - 42908337
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    |||||||  ||||||| ||||||||  || ||||||||||||| ||||   ||||||||||  | |||| |||||  ||||||||||| ||| |||  |     
T  42908520 taggcatgacaatggggcggggtggggacgggttttgccttccccatccccatcccctacttccatatacttacccgttaccctacccatacccaaaggg 42908421  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||| ||||||| |||   |||||||||||||||||  || ||||| ||| ||| ||||||| |||||||||    
T  42908420 gatgagaaattgaatcccatccccgtcccgaatgggttcgggtattcccaccacatccccgttcccacagtgaaacaatttttt 42908337  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 565
Target Start/End: Original strand, 17884916 - 17885022
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| ||||||||||  ||||||||||| || ||||| | |||||||||||||||||||||||| ||| ||| ||||| |||||| ||  ||||||||||    
T  17884916 tctcatatatttacccgttaccctacccatattcaacggggatgagaaattgaatctcatccccgtccccgacgggtttgggtatccccacctcatcctc 17885015  T
Q  559 gtccccg 565  Q
     ||||||    
T  17885016 atccccg 17885022  T

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Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 37578964 - 37579069
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||| | ||| |||| | |||||||||||||| | ||||||||||| ||| |||||||||||| |||||| ||||| |||||||||| ||||| |    
T  37578964 ttaccctactcatacccaacggggatgagaaattgaaccacatccccatccccgacgggttcgggtatccctgccccatccccgtccccgcattgaat-a 37579062  T
Q  576 atttttt 582  Q
    |||||||    
T  37579063 atttttt 37579069  T

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Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 430 - 582
Target Start/End: Original strand, 18683606 - 18683759
Alignment:
Q  430 ggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctc 528  Q
    ||||||||||| ||||||   ||||||||||| | |||| |||||| ||| ||||||| ||  |||  |  ||||||||||||||||||||||| ||| |    
T  18683606 ggttttgcctttctcatccccatcccctactcccatatacttacctgttatcctacccatatccaaaaggaatgagaaattgaatctcatccccgtcccc 18683705  T
Q  529 gatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
     ||||||||  ||||||| ||| ||||| |||||||| |||| |||||||||||    
T  18683706 aatgggttcatgtattcccgccccatccccgtccccgtagtgtatcaatttttt 18683759  T

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Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 477 - 582
Target Start/End: Original strand, 21702381 - 21702485
Alignment:
Q  477 taccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaa 576  Q
    |||||||||| |||||||| | ||||||||||||||||  |||||| ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||| ||    
T  21702381 taccctacccatactcaacggggatgagaaattgaatcctatccccgtccccgacgggttcgggtatccccgccccatccccgtccccgcattgaat-aa 21702479  T
Q  577 tttttt 582  Q
    ||||||    
T  21702480 tttttt 21702485  T

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Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 37196397 - 37196313
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||| |||||  ||||||||||| ||| |||| | ||||||||||||||||||||| || ||||||| ||||||||||||    
T  37196397 tctcgtatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatctccgtcctcgacgggttcgggtat 37196313  T

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Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 16865793 - 16865975
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| || |||||  || |||||| |||||||||||   || ||| | | || |||| |||||  ||||||||||| ||| |||| |     
T  16865793 taggcatggcaatggggcgaggtggggacgggttttaccttcctcatccccatacccgattatcatatacttacccgttaccctacccatacccaacggg 16865892  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||| ||  || ||||| |||||||||| ||||| ||||||||    
T  16865893 gatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccaccccatccccgtccccgcattgaat-aatttttt 16865975  T

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Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 18125597 - 18125515
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||| ||||||||    
T  18125597 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatccccgtccccgcattgaat-aatttttt 18125515  T

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Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 29015351 - 29015268
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||| | |||||||  |||||||| ||||||||| ||| |||  ||||||||||||||||    
T  29015351 gatgagaaattgaatctcatccccgtccccaatgggtttaggtattcccgcctcatccccgttcccatagtgaatcaatttttt 29015268  T

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Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 464 - 543
Target Start/End: Complemental strand, 45709256 - 45709177
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||| | |||||||| || ||| |||||| |||||||||||||||| ||||||| ||||||| ||||||||||||    
T  45709256 tatatttacatgttaccctatccatacccaactgggatgagaaattgaatcccatccccgtcctcgacgggttcgggtat 45709177  T

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Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 17851549 - 17851633
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  ||||||||||| ||| |||| | |||||||||||||||||||||||  ||||||| ||||||||||||    
T  17851549 tctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccctgtcctcgacgggttcgggtat 17851633  T

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Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 569
Target Start/End: Complemental strand, 23534033 - 23533963
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagt 569  Q
    |||||||||| ||||||||||||| ||  ||| |||||||||||| |||||||||||||| ||| ||||||    
T  23534033 gatgagaaatcgaatctcatccccgtctccgacgggttcgggtatccctgcctcatcctcatccgcgcagt 23533963  T

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Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 398 - 543
Target Start/End: Original strand, 43507055 - 43507200
Alignment:
Q  398 attaggcatcgcaatgggacggggtggaaaccggttttgccttcctcat-cttatcccctactctcgtatatttacctattaccctacccgtactcaact 496  Q
    ||||||||| ||||||||||| |||||  || |||||| |||||| | | |  || ||| | |||| |||| |||||| ||||||||||| ||||||||     
T  43507055 attaggcatggcaatgggacgaggtggggacgggttttaccttccccgttcccatacccgattctcatatacttacctgttaccctacccatactcaacg 43507154  T
Q  497 gcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    | ||||| |||||||||||||||||| ||| |||  |||||||||||    
T  43507155 g-gatgacaaattgaatctcatccccgtccccgacaggttcgggtat 43507200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 573
Target Start/End: Original strand, 7779691 - 7779806
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcat--ccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    ||||||||| ||| || ||||||||||| ||  |||| | ||||||||||||||||||||  |||| ||| ||| |||||||||||| || ||| |||||    
T  7779691 tctcgtatacttatctgttaccctacccatatccaacggggatgagaaattgaatctcatccccccgtccccgacgggttcgggtatccccgccacatcc 7779790  T
Q  557 tcgtccccgcagtgaat 573  Q
     |||||||||| |||||    
T  7779791 -cgtccccgcattgaat 7779806  T

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Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 17885147 - 17885236
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccg 565  Q
    ||||||||||| ||| |||| | |||||||||||||||||||||||| ||| ||| ||||| |||||| ||  |||||||| | ||||||    
T  17885147 ttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggtttgggtatccccacctcatccccatccccg 17885236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 573
Target Start/End: Complemental strand, 23475691 - 23475618
Alignment:
Q  500 atgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    ||||||||| ||||||||||||| ||   || |||||||||||| || ||||||||||| ||||||||||||||    
T  23475691 atgagaaatcgaatctcatccccgtctctgacgggttcgggtatccccgcctcatcctcatccccgcagtgaat 23475618  T

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Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 38140199 - 38140115
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  ||||||||||| ||  |||| | |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  38140199 tctcatatacttacccgttaccctacccataaccaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 38140115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 567
Target Start/End: Complemental strand, 41741858 - 41741750
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||||||||||||||  ||| ||||||| ||  |||| | |||||||||||||||||||||  | ||| ||| || ||||||||| || ||||||||| |    
T  41741858 tctcgtatatttacccgttatcctacccatatccaacagggatgagaaattgaatctcatcatcgtccccgacggattcgggtatccccgcctcatcccc 41741759  T
Q  559 gtccccgca 567  Q
     ||||||||    
T  41741758 atccccgca 41741750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 480 - 567
Target Start/End: Original strand, 24752738 - 24752825
Alignment:
Q  480 cctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgca 567  Q
    ||||||| || ||||| | |||||||||||||||| |||| |||||| ||| |||||| ||||| |||||| |||||  |||||||||    
T  24752738 cctacccatattcaacggagatgagaaattgaatcacatctccatccccgacgggttcaggtatccctgccccatccctgtccccgca 24752825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 543
Target Start/End: Complemental strand, 39456383 - 39456304
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||||| ||||||||||| ||| |||| | ||||||||||||||| |||||||| ||| ||| ||||| ||||||    
T  39456383 tatacttacctgttaccctacccctacccaacggggatgagaaattgaatttcatccccgtccccgacgggtttgggtat 39456304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 546
Target Start/End: Original strand, 21750478 - 21750544
Alignment:
Q  480 cctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcc 546  Q
    ||||| ||||| |||| | ||||||||||||||||||||||||| |  | |||||||||||||||||    
T  21750478 cctactcgtacccaacagagatgagaaattgaatctcatccccacctccaatgggttcgggtattcc 21750544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 573
Target Start/End: Original strand, 25905329 - 25905426
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    ||||||||||| ||| ||||   |||||||||||||||||||||||| ||| ||| || ||||||||| ||  || ||||| ||||| |||| |||||    
T  25905329 ttaccctacccatacccaacaaggatgagaaattgaatctcatccccgtccccgacggattcgggtatcccctccccatccccgtcctcgcattgaat 25905426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 25980333 - 25980236
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    |||| |||| |||||  ||||||||||| ||| |||| | ||| ||||||||||||||||| || ||||| | |||||||||||| || ||| |||||    
T  25980333 tctcatatacttacccgttaccctacccatacccaacggggataagaaattgaatctcatctccgtcctcaacgggttcgggtatccccgccccatcc 25980236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 522
Target Start/End: Original strand, 33840758 - 33840821
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatcccc 522  Q
    |||| |||| |||||| ||||||||||| |||||||| | |||||||||| ||| |||||||||    
T  33840758 tctcatatacttacctgttaccctacccatactcaacggggatgagaaatcgaacctcatcccc 33840821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 546
Target Start/End: Complemental strand, 37103522 - 37103475
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcc 546  Q
    ||||||||||||||||||||| || ||| | |||||||||||||||||    
T  37103522 gatgagaaattgaatctcatctccttccccaatgggttcgggtattcc 37103475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 543
Target Start/End: Original strand, 41103344 - 41103411
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||||  ||| |||| | |||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  41103344 ttaccctacctatacccaacggggatgagaaattgaatctcattcccgtccccgatgggtttgggtat 41103411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 564
Target Start/End: Original strand, 16078737 - 16078802
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtcccc 564  Q
    |||||||||||||| | ||||||||||| ||| |||||||||||| || ||| ||||  |||||||    
T  16078737 gatgagaaattgaaccccatccccatccccgacgggttcgggtatccccgccccatctccgtcccc 16078802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 556
Target Start/End: Original strand, 23328334 - 23328391
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    ||||||||||| |||||||||||| ||  ||| |||||||||||| || |||||||||    
T  23328334 gatgagaaattaaatctcatccccgtctccgacgggttcgggtatccccgcctcatcc 23328391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 564
Target Start/End: Original strand, 26622676 - 26622741
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtcccc 564  Q
    |||||||||||||| | ||||| | ||| ||| |||||||||||| || ||| |||||||||||||    
T  26622676 gatgagaaattgaaccccatccacgtccccgacgggttcgggtatccccgccccatcctcgtcccc 26622741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 573
Target Start/End: Complemental strand, 44794430 - 44794321
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccc 563  Q
    ||||||||||| ||||||||||| ||   ||| | |||||||||| ||||||||||||| ||  ||| |||||| ||| | || ||| ||||| ||||||    
T  44794430 tatatttacctgttaccctacccatatctaacagggatgagaaatcgaatctcatccccgtctccgaagggttcaggtgtccccgccccatccccgtccc 44794331  T
Q  564 cgcagtgaat 573  Q
     ||| |||||    
T  44794330 tgcattgaat 44794321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 513
Target Start/End: Original strand, 27062780 - 27062864
Alignment:
Q  430 ggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaat 513  Q
    |||||| |||||| |||| | ||||||||||||| |||| |||| |  |||||||||| ||| |||| | |||||||||||||||    
T  27062780 ggtttttccttccccatcctcatcccctactctcatatacttacttgctaccctacccatacccaacggggatgagaaattgaat 27062864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 450 - 582
Target Start/End: Complemental strand, 15174291 - 15174159
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    |||||| |||| | |||| |||||| ||||||||||| || ||||  | ||||||||||||||||| |||||| ||| | ||||||||||||||||| ||    
T  15174291 atccccgactcccatatacttacctgttaccctacccatattcaatggggatgagaaattgaatcttatccccgtccccaatgggttcgggtattcccgc 15174192  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | ||||| |||||||||||||||||||||||||    
T  15174191 cccatccccgtccccgcagtgaatcaatttttt 15174159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 24870432 - 24870310
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||| |||| | |||||||||||||||||||||||| ||||||||||||| ||||||  | |||||||||||    
T  24870432 tctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtcctcgatgggtttgggtatcaccgcctcatcctc 24870333  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  24870332 gtccccgcattgaat-aatttttt 24870310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 24927568 - 24927750
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||||||||||||  || |||||| |||||| | ||   || ||| | |||| |||| |||||  ||||||||||| ||| |||| |     
T  24927568 taggcatggcaatgggacggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacggg 24927667  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||| |||| |||||||||||||||||| ||||| ||||||||    
T  24927668 gatgagaaattgaatcccatccccgtccccgacgggttcgggtatccctgtctcatcctcgtccccgcattgaat-aatttttt 24927750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 450 - 579
Target Start/End: Complemental strand, 15069026 - 15068897
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||| | |||| |||||| ||||||||||| ||| |||| | |||||||||||||||||||| ||| ||| | ||||||||||||||||| ||    
T  15069026 atcccctactcccatatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcattcccgtccccaatgggttcgggtattcccgc 15068927  T
Q  550 ctcatcctcgtccccgcagtgaatcaattt 579  Q
    | ||||| | |||||| |||| ||||||||    
T  15068926 cccatccccatccccgtagtgtatcaattt 15068897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 582
Target Start/End: Complemental strand, 34301623 - 34301441
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| ||||||||  || |||||| |||||| ||||   || ||| | | || |||| |||||| ||||||||||| ||| |||| |     
T  34301623 taggcatggcaatggggcggggtggggacgggttttaccttccccatccccatacccgattatcatatacttacctgttaccctacccatacccaacggg 34301524  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||| ||||||||    
T  34301523 gatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatccccgtccccgcattgaat-aatttttt 34301441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 567
Target Start/End: Original strand, 20399315 - 20399423
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||||||||| ||||| ||| |||| | |||||||||||||| | ||||||| ||| ||| |||||||| ||| |||||||||||| |    
T  20399315 tctcatatacttacctattaccttacccatacccaacagggatgagaaattgaaccccatccccgtccccgacgggttcggttatccctgcctcatcccc 20399414  T
Q  559 gtccccgca 567  Q
    |||||||||    
T  20399415 gtccccgca 20399423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 503 - 582
Target Start/End: Original strand, 8030839 - 8030918
Alignment:
Q  503 agaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||| |||   || |||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  8030839 agaaattgaatctcatccccgtcccaaattggttcgggtattcccgcctcatccccgtccccgcactgaatcaatttttt 8030918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 34776141 - 34776263
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| ||||||||||| ||| ||||||| ||  |||| | |||||||||||||||||||||||| ||| | | |||||||| ||| || ||||||||| |    
T  34776141 tctcatatatttacctgttaacctacccatatccaacggggatgagaaattgaatctcatccccgtccccaacgggttcggatatccccgcctcatcccc 34776240  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  34776241 gtccccgcattgaat-aatttttt 34776263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 582
Target Start/End: Original strand, 32302677 - 32302862
Alignment:
Q  398 attaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaact 496  Q
    ||||||||| |||||||| ||||||||  || |||||| |||||| | ||   || ||| | |||| |||| |||||  ||||||||||| ||| ||||     
T  32302677 attaggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacg 32302776  T
Q  497 gcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
      |||||||||||||||| ||||||| | | ||| |||||||||||| || ||| ||||| |||||||||| ||||| ||||||||    
T  32302777 aggatgagaaattgaatcccatccccgttcccgacgggttcgggtatccccgccccatccccgtccccgcattgaataaatttttt 32302862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 1063188 - 1063272
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  ||||||||||  ||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||    
T  1063188 tctcatatacttacccgttaccctacctatacccaacggggatgagaaattgaatctcatccccatccccgatgggttcgggtat 1063272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 40789186 - 40789366
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| |  ||||||||| ||||||| ||| | |||| | ||||||||||  | |||| |||||| ||||||||||  ||  |||| |     
T  40789186 taggcatggcaatggggcaaggtggaaacgggttttgtctttc-catcctcatcccctacttccatatacttacctgttaccctacca-tatccaacgga 40789283  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
     ||||||||||||||||||||||||||| | ||||||| || || ||||||| ||||| |||||| |||||||||||| |||||    
T  40789284 aatgagaaattgaatctcatccccatccccaatgggtttggata-tcctgccccatccccgtccctgcagtgaatcaacttttt 40789366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 17468952 - 17469057
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| || ||||| | ||||| ||||||||  |||||| ||||| ||| |||||||||||| |||||| ||||| |||||||||| ||||| |    
T  17468952 ttaccctacccatattcaacggggatgataaattgaacttcatcctcatccccgacgggttcgggtatccctgccccatccccgtccccgcattgaat-a 17469050  T
Q  576 atttttt 582  Q
    |||||||    
T  17469051 atttttt 17469057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 582
Target Start/End: Complemental strand, 28977518 - 28977401
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccc 563  Q
    |||| |||||| ||||||||||| ||| |||| | |||||||||||||||| ||||| | ||| | | |||||||||||| || ||| ||||| ||||||    
T  28977518 tatacttacctgttaccctacccatacccaacggggatgagaaattgaatcacatccacgtccccaacgggttcgggtatccccgccccatccccgtccc 28977419  T
Q  564 cgcagtgaatcaatttttt 582  Q
    |||| ||||| ||||||||    
T  28977418 cgcattgaat-aatttttt 28977401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 556
Target Start/End: Complemental strand, 6388978 - 6388877
Alignment:
Q  455 ctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcat 554  Q
    |||||||| |||| |||||| ||||||||||| ||  || | | |||||||||| ||||||||||||| ||| ||| |||||||| |||||||||| |||    
T  6388978 ctactctcatatacttacctgttaccctacccatatccagcggggatgagaaatcgaatctcatccccgtccccgacgggttcggatattcctgccccat 6388879  T
Q  555 cc 556  Q
    ||    
T  6388878 cc 6388877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 543
Target Start/End: Complemental strand, 11255397 - 11255330
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||| || |||||||| | |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  11255397 ttaccctatccatactcaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 11255330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 572
Target Start/End: Complemental strand, 2076245 - 2076132
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||| |||| | |||||||||||||||||||||||| ||| ||| |||||||| |||  | ||| ||||| |    
T  2076245 tctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggttcggttatctccgccccatcccc 2076146  T
Q  559 gtccccgcagtgaa 572  Q
    ||| ||||| ||||    
T  2076145 gtctccgcattgaa 2076132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 2184032 - 2183948
Alignment:
Q  481 ctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccg 565  Q
    |||||| || ||||| | ||||||||||||||| |||||||| ||| | |||||||||||||||||  || ||||| ||||||||    
T  2184032 ctacccatattcaacggggatgagaaattgaatttcatccccgtccccaatgggttcgggtattcccaccacatccccgtccccg 2183948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 582
Target Start/End: Complemental strand, 4231111 - 4231006
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||| |||| | ||| | ||||||||||||||||||||||  || |||||||||||| || ||| |||||  ||| ||||| ||||| |    
T  4231111 ttaccctacccatacccaacggggataataaattgaatctcatccccatcccagacgggttcgggtatccccgccccatccctgtctccgcattgaat-a 4231013  T
Q  576 atttttt 582  Q
    |||||||    
T  4231012 atttttt 4231006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 573
Target Start/End: Original strand, 34139164 - 34139238
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    |||||||||||||| |||| |||  ||| |||||||||||| ||| || ||||||||| |||||||||| |||||    
T  34139164 gatgagaaattgaacctcacccctgtccccgatgggttcggttatccccgcctcatccacgtccccgcattgaat 34139238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 564
Target Start/End: Complemental strand, 36132284 - 36132219
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtcccc 564  Q
    |||||||||||||||||||||| ||||| |||  |||||||||||  | ||| |||||||||||||    
T  36132284 gatgagaaattgaatctcatccacatccccgacaggttcgggtatctccgccccatcctcgtcccc 36132219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 39445931 - 39445887
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  39445931 gatgagaaattgaatctcatccccgtccccgacgggttcgggtat 39445887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 554
Target Start/End: Original strand, 5700012 - 5700067
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcat 554  Q
    ||||| |||| ||||||||||||| |||  |||||||||||||||||| |||||||    
T  5700012 gatgaaaaatcgaatctcatccccgtccaggatgggttcgggtattcccgcctcat 5700067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 526
Target Start/End: Complemental strand, 2190274 - 2190224
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcc 526  Q
    ||||||||||| ||  |||| | ||||||||||||||||||||||||||||    
T  2190274 ttaccctacccatatccaacggggatgagaaattgaatctcatccccatcc 2190224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 541
Target Start/End: Original strand, 17220436 - 17220478
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggt 541  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||    
T  17220436 gatgagaaattgaatcccatccccgtccccgatgggttcgggt 17220478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 556
Target Start/End: Original strand, 14687129 - 14687209
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    |||||||| || |||||| | | |||||||||| ||||||||||||| |||  || |||||||||||| |||  |||||||    
T  14687129 ttaccctatccatactcagcagggatgagaaatcgaatctcatccccgtccctgacgggttcgggtatccctatctcatcc 14687209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 40248711 - 40248667
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||||||| ||  ||| ||||||||||||    
T  40248711 gatgagaaattgaatctcatccccgtctccgacgggttcgggtat 40248667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 430 - 579
Target Start/End: Complemental strand, 56358 - 56208
Alignment:
Q  430 ggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctc 528  Q
    ||||||||||||| ||||   ||||||||||| | |||| |||||  ||||||||||| ||  |||| | ||||||||||||||||||||||| |||| |    
T  56358 ggttttgccttccccatccccatcccctactcccatatacttacccgttaccctacccatatccaacagggatgagaaattgaatctcatccctatcccc 56259  T
Q  529 gatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaattt 579  Q
     ||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  56258 aatgggttcgggtattcccgcccaatccccgtccccgcagtgaatcaattt 56208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 32853463 - 32853645
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| ||||||||| || |||||| |||||| ||||   || ||| | | || |||| |||||  ||||||||||| ||| |||| |     
T  32853463 taggcatggcaatggggcggggtggagacgggttttaccttccccatccccatacccgattatcatatacttaccagttaccctacccatacccaacggg 32853562  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| || ||| ||||| |||||||||| ||||| ||||||||    
T  32853563 gatgagaaattgaatctcatccccatccccgacgggttcgggtatccccgccccatccccgtccccgcattgaat-aatttttt 32853645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 2366945 - 2367127
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| ||||||||  || |||||| |||||||||||   ||  || | |||| |||| |||| | ||||||||| | ||| |||| |     
T  2366945 taggcatggcaatggggcggggtggggacgggttttaccttcctcatccccatatccgattctcatatacttacatgttaccctactcatacccaacggg 2367044  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||| ||||||||    
T  2367045 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatccccgtccccgcattgaat-aatttttt 2367127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 582
Target Start/End: Complemental strand, 3484392 - 3484210
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatct-tatcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| ||||||||  || |||||| |||||| | ||  ||| ||| | |||| |||| |||||  ||||||||||| ||| |||| |     
T  3484392 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccctatacccgattctcatatacttacccgttaccctacccatacccaacggg 3484293  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||| ||||| |||||||||| |||| |||||||||    
T  3484292 gatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatccccgtccccgcattgaa-caatttttt 3484210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 12309277 - 12309382
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    |||| |||||| |||||||| | |||||||||||||||||||| ||  |||||||||| ||||||||| || ||||||||| |||||||||| ||||| |    
T  12309277 ttactctacccatactcaacggggatgagaaattgaatctcattccggtcctcgatggattcgggtatccccgcctcatccccgtccccgcattgaat-a 12309375  T
Q  576 atttttt 582  Q
    |||||||    
T  12309376 atttttt 12309382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 466 - 582
Target Start/End: Original strand, 18908557 - 18908673
Alignment:
Q  466 tatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccg 565  Q
    ||||||||| |||||||| || |||  ||  | ||||||||| |||||||||||||||||||| ||||||| ||||||||| ||| ||||| ||||||||    
T  18908557 tatttacctgttaccctaaccatacctaagggggatgagaaactgaatctcatccccatcctcaatgggtttgggtattcccgccccatccccgtccccg 18908656  T
Q  566 cagtgaatcaatttttt 582  Q
    || ||||| ||| ||||    
T  18908657 caatgaattaatatttt 18908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 399 - 573
Target Start/End: Complemental strand, 10188544 - 10188369
Alignment:
Q  399 ttaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactg 497  Q
    |||||||| |||||||| ||||||||  ||  ||||| |||||| ||||   || ||| | |||| |||| |||||| ||||||||||| ||| |||| |    
T  10188544 ttaggcatggcaatggggcggggtggggacgagttttaccttccccatccccatacccgattctcatatacttacctgttaccctacccatacccaacgg 10188445  T
Q  498 cgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
     |||||||||||||||| ||||||| ||| ||| | |||||||||| || ||| ||||| |||||||||| |||||    
T  10188444 ggatgagaaattgaatcccatccccgtccccgacgagttcgggtatccccgccccatccccgtccccgcattgaat 10188369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 573
Target Start/End: Complemental strand, 10142926 - 10142812
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    ||||||||| |||||  ||||||||||| |||||||| | |||||||||||||||| ||||| | ||| ||| |||||||||||| || ||| |||||      
T  10142926 tctcgtatacttacccgttaccctacccatactcaacggggatgagaaattgaatcccatcctcgtccccgacgggttcgggtatccccgccccatccct 10142827  T
Q  559 gtccccgcagtgaat 573  Q
    ||||||||| |||||    
T  10142826 gtccccgcattgaat 10142812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 14254679 - 14254761
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||| |||| | ||| ||||| ||||||||    
T  14254679 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccctgcctcatccccgtctctgcattgaat-aatttttt 14254761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 5863781 - 5863697
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  ||||||||||| ||| |||| | |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  5863781 tctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 5863697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 20611328 - 20611252
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcc 526  Q
    ||||||||||| | |||| |||||| ||||| ||||| ||| |||| | ||||||||||||||||||||||||||||    
T  20611328 atcccctactcccatatacttacctgttaccatacccatacccaacggggatgagaaattgaatctcatccccatcc 20611252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 543
Target Start/End: Original strand, 9442268 - 9442412
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    |||||||  ||||||||||||||||  || |||||| |||||| | |||  || ||| | |||| |||| |||||  ||||| ||||| ||  |||| |     
T  9442268 taggcatgacaatgggacggggtggggacgggttttaccttccccgtctccatacccgattctcatatacttacccgttaccttacccatatccaacggg 9442367  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||    
T  9442368 gatgagaaattgaatctcattcccgtcctcgacgggttcgggtat 9442412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 9458368 - 9458444
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcc 526  Q
    ||||||||||| | |||| |||||  ||||||||||| ||| |||| | ||||||||||||||||||||||| ||||    
T  9458368 atcccctactcccatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccctatcc 9458444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 543
Target Start/End: Original strand, 27534391 - 27534458
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||||| ||| |||| | |||||||||||||||| ||||||| ||| ||| ||||||||||||    
T  27534391 ttaccctacccatacccaacggggatgagaaattgaatcacatccccgtccccgacgggttcgggtat 27534458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 29200271 - 29200194
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||     |||| || | |||||||||||||||||||||||    
T  29200271 gatgagaaattgaatctcatccccgtccccaatgggttcgggtatt-----ctca-ccccatccccgcagtgaatcaatttttt 29200194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 32052735 - 32052857
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||  |||| | |||||||||||||||||||||||| ||  | | |||||| ||||| || ||||||||| |    
T  32052735 tctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtctccaacgggttccggtatccccgcctcatcccc 32052834  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    |||||| || ||||| ||||||||    
T  32052835 gtccccacattgaat-aatttttt 32052857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 573
Target Start/End: Original strand, 24225396 - 24225493
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    ||||||||||| ||  |||| | |||||||||||||||| |||| || ||  ||| |||||||||||| || ||| |||||||||| ||||| |||||    
T  24225396 ttaccctacccatatccaacggtgatgagaaattgaatcacatcgccgtctccgacgggttcgggtatccccgccccatcctcgtctccgcattgaat 24225493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 555
Target Start/End: Original strand, 14244967 - 14245023
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatc 555  Q
    ||||||||||| ||| |||||||| ||| |||||||||||||||| || ||||||||    
T  14244967 gatgagaaattaaatttcatccccgtccccgatgggttcgggtatccccgcctcatc 14245023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 556
Target Start/End: Original strand, 32959589 - 32959646
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    |||||||||| ||||||||||||| ||| | | |||||||||||| |||||| |||||    
T  32959589 gatgagaaatcgaatctcatccccgtccccaacgggttcgggtatccctgccccatcc 32959646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 253190 - 253146
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||||||| ||| ||| | ||||||||||    
T  253190 gatgagaaattgaatctcatccccgtccccgacgagttcgggtat 253146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 544
Target Start/End: Original strand, 11762130 - 11762210
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtatt 544  Q
    |||| |||||| ||||||||| | ||  |||| | | |||||||||||| |||||| |||||| ||| |||||||||||||    
T  11762130 tatacttacctgttaccctactcatatccaacgggggtgagaaattgaacctcatcgccatccccgacgggttcgggtatt 11762210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 12141076 - 12141160
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  |||| |||||| ||| |||| | ||||||||||||||||||||| || ||| ||| ||||| ||||||    
T  12141076 tctcatatacttacccgttactctacccatacccaacggggatgagaaattgaatctcatcgccgtccccgacgggtttgggtat 12141160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 30815970 - 30816014
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||| | ||||||| ||||||| ||||||||||||    
T  30815970 gatgagaaattgaaccccatccccgtcctcgacgggttcgggtat 30816014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 450 - 582
Target Start/End: Complemental strand, 35077622 - 35077496
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||| ||| | |||| |||||| ||||||||||| ||| |||| | |||||||||||||||||||||||||      |||||||||||||||||  |    
T  35077622 atcccctgctcccatatacttacctgttaccctacccatacccaacggagatgagaaattgaatctcatcccca------atgggttcgggtattcccac 35077529  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | |||||||||||||||| ||||||||||||||    
T  35077528 cccatcctcgtccccgcaatgaatcaatttttt 35077496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 399 - 582
Target Start/End: Original strand, 24710476 - 24710659
Alignment:
Q  399 ttaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactg 497  Q
    |||||||| ||||| || ||||||||  || |||||| |||||| | |||  || ||| | |||| |||| |||||| ||||||||||  |||||||| |    
T  24710476 ttaggcatggcaatagggcggggtggggacgggttttaccttccccgtctccatacccgattctcatatacttacctgttaccctacctatactcaacgg 24710575  T
Q  498 cgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
     |||||||||||||||||||||||| ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||| ||||||||    
T  24710576 ggatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatccccgtccccgcattgaat-aatttttt 24710659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 17516119 - 17516202
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||||||| ||||||| |||| || || ||||||||||||||||| | ||||| | |||||||||||||||||||||||||    
T  17516119 gatgagaaattaaatctcacccccgtcttcaatgggttcgggtattcccggctcattcccgtccccgcagtgaatcaatttttt 17516202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 34610770 - 34610875
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||| |||| | |||||||||||||||||||||| | ||| ||| |||||||||||| |||||| ||||| ||||||| || ||||| |    
T  34610770 ttaccctacccatacccaacggggatgagaaattgaatctcatcctcgtccccgacgggttcgggtatccctgccccatccccgtccccacattgaat-a 34610868  T
Q  576 atttttt 582  Q
    |||||||    
T  34610869 atttttt 34610875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 573
Target Start/End: Complemental strand, 36187631 - 36187517
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    ||||||||| |||||  ||||||||||| ||| |||| | |||||||||||||||| ||||||| ||| |||||| ||||||||| ||  || ||||| |    
T  36187631 tctcgtatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgatggattcgggtatccccaccccatcccc 36187532  T
Q  559 gtccccgcagtgaat 573  Q
    ||||||||| |||||    
T  36187531 gtccccgcattgaat 36187517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 450 - 582
Target Start/End: Original strand, 19892621 - 19892753
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||||| |||| |||| | ||||||||||| |||  ||| | |||||||||||||||||||||||| ||| |  || ||||  ||||| | ||    
T  19892621 atcccctactctcatatacttacttgttaccctacccatacataacggggatgagaaattgaatctcatccccgtccccattgagttcaagtatttccgc 19892720  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||| |  ||| ||||||||||||||||||    
T  19892721 ctcatccccaaccctgcagtgaatcaatttttt 19892753  T

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Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 399 - 582
Target Start/End: Original strand, 20774250 - 20774433
Alignment:
Q  399 ttaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactg 497  Q
    |||||||| |||||||| ||||||||  || |||||| |||||| | ||   || ||| | |||| |||| |||||  ||||||||||| ||  |||| |    
T  20774250 ttaggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatatccaacgg 20774349  T
Q  498 cgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
     |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||| ||||||||    
T  20774350 ggatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatccccgtccccgcattgaat-aatttttt 20774433  T

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Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 16237695 - 16237612
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||  ||| | |||||||||||||||||  || ||| | |||||||| ||||||||||||||||    
T  16237695 gatgagaaattgaatctcatccctgtccccaatgggttcgggtattccaaccccattcccgtccccgtagtgaatcaatttttt 16237612  T

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Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 10450452 - 10450368
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagt-gaatcaatttttt 582  Q
    |||||||||||||||| | ||||| ||||  ||||||||||||||||| ||||||||| | |||||||||| |||||||| ||||    
T  10450452 gatgagaaattgaatcccgtccccgtccttaatgggttcgggtattcccgcctcatccccatccccgcagtggaatcaatatttt 10450368  T

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Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 476 - 556
Target Start/End: Original strand, 32594592 - 32594672
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    ||||||||||| ||| |||| | |||||||||||||||||||||||| | | |||||||||||||||| || ||| |||||    
T  32594592 ttaccctacccatacccaacggggatgagaaattgaatctcatccccgtacccgatgggttcgggtatccccgccccatcc 32594672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 503 - 582
Target Start/End: Complemental strand, 48024633 - 48024554
Alignment:
Q  503 agaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||| ||| | || |||||||||||||| ||||||||   ||| |||| |||||||||||||||    
T  48024633 agaaattgaatctcatccccgtccacaataggttcgggtattcccgcctcatctctgtctccgcggtgaatcaatttttt 48024554  T

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Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 573
Target Start/End: Original strand, 13020383 - 13020480
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctc-atccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    ||||||||||  |||||||| | |||||||||||||||||| | |||||| | ||| ||||||||||| ||| ||||||||| |||||||||| |||||    
T  13020383 ttaccctacctatactcaacggggatgagaaattgaatctcaacccccatacccgacgggttcgggta-tcccgcctcatccccgtccccgcattgaat 13020480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 14902807 - 14902863
Alignment:
Q  500 atgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcct 557  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  14902807 atgagaaatagaatctcatccccgtcctcgatgggttcgggta-tcccgcctcatcct 14902863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 40087867 - 40087770
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    |||| |||| |||||  ||||||||||| ||| |||  | |||||||||||||||||||||||| ||| ||| |||||||||||| || ||| |||||    
T  40087867 tctcatatacttacccgttaccctacccatacccaatggggatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatcc 40087770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 543
Target Start/End: Complemental strand, 19572887 - 19572820
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||||| ||| |||| | |||||||||||||||||||||||| ||| ||| ||||| ||||||    
T  19572887 ttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggtttgggtat 19572820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 28297612 - 28297734
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  |||||| |||| ||| |||| |  ||||||||||||||| ||||||| ||| ||| |||||||||||| || ||| |||||      
T  28297612 tctcatatacttacccgttacccgacccatacccaacgggaatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatccct 28297711  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  28297712 gtccccgcattgaat-aatttttt 28297734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 29936113 - 29936218
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||  |||| | |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||| ||| | ||||| |||| ||||| |    
T  29936113 ttaccctacccatatccaacggggatgagaaattgaatcacatccccgtccccgacgggttcgggtatccccgccccattcccgtcctcgcattgaat-a 29936211  T
Q  576 atttttt 582  Q
    |||||||    
T  29936212 atttttt 29936218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 543
Target Start/End: Complemental strand, 33293947 - 33293874
Alignment:
Q  469 ttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||| |||||||| ||  ||||||| | |||||||||||||||||||||| | |||| |||||||||||||||    
T  33293947 ttacctgttaccctaaccaaactcaacggggatgagaaattgaatctcatcctcgtcct-gatgggttcgggtat 33293874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 565
Target Start/End: Complemental strand, 50427063 - 50426958
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| || |||||   |||||||||||||||||||||||| ||| ||| |||||||||||| ||  |||||||| |    
T  50427063 tctcatatacttacccgttaccctacccatattcaacgaggatgagaaattgaatctcatccccgtcc-cgacgggttcgggtatccccacctcatcccc 50426965  T
Q  559 gtccccg 565  Q
     ||||||    
T  50426964 atccccg 50426958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 543
Target Start/End: Complemental strand, 34060410 - 34060345
Alignment:
Q  478 accctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||| || |||||   |||||||||||||||||||||||| |||  |||||||||||||||    
T  34060410 accctacccatattcaacgaggatgagaaattgaatctcatccccgtccctgatgggttcgggtat 34060345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 17092329 - 17092285
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  17092329 gatgagaaattgaatctcatccccgtccccgacgggttcgggtat 17092285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 23493734 - 23493650
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  ||||||||||| || ||||| | |||||||||||||||| ||||||| |||  || ||||||||||||    
T  23493734 tctcatatacttacccgttaccctacccatattcaacggggatgagaaattgaatcccatccccgtccctgacgggttcgggtat 23493650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 23966537 - 23966621
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| ||||| |||||||||||| ||| ||||   |||||||||||||||| ||||||| ||| ||| |||||| |||||    
T  23966537 tctcatatacttacccattaccctacccatacccaacgaagatgagaaattgaatcccatccccgtccccgacgggttctggtat 23966621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 574
Target Start/End: Original strand, 37032047 - 37032115
Alignment:
Q  506 aattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatc 574  Q
    |||| |||||||||||| ||| | || |||||||||||| | ||| ||||| |||||||||||||||||    
T  37032047 aattaaatctcatccccgtccacaataggttcgggtatttccgccgcatccccgtccccgcagtgaatc 37032115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 519
Target Start/End: Original strand, 7997312 - 7997375
Alignment:
Q  456 tactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatc 519  Q
    ||||||||||||||||||| |||| |||||| |||  ||||| ||||||||||| |||| ||||    
T  7997312 tactctcgtatatttacctgttactctacccatacctaactgggatgagaaatttaatcccatc 7997375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 543
Target Start/End: Original strand, 13390151 - 13390218
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||||| ||  |||| | |||||||||||||||| ||||||| ||| ||| ||||||||||||    
T  13390151 ttaccctacccatatccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtat 13390218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 29871693 - 29871572
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||| | ||||||||| | |||||||||| |||||||||||||  |  |||||| ||| ||| |||||||| ||| || ||||||| |||    
T  29871693 tctcatatacttacttgttaccctactcatactcaactgggatgagaaattgagccctatccccgtccccgacgggttcggatatccccgcctcat-ctc 29871595  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    |||||| || ||||| ||||||||    
T  29871594 gtccccacattgaat-aatttttt 29871572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 5180730 - 5180791
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatcc 520  Q
    |||| |||| ||||| |||||||||||| ||  |||| | ||||||||||||||||||||||    
T  5180730 tctcatatacttacccattaccctacccatatccaacggggatgagaaattgaatctcatcc 5180791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 573
Target Start/End: Complemental strand, 24237153 - 24237056
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    |||||| |||| ||| |||| | |||||||||||||||||||||| | | | ||| |||||||||||| ||  || ||||  |||||||||| |||||    
T  24237153 ttaccccacccatacccaacggggatgagaaattgaatctcatcctcgtgcccgacgggttcgggtatccccaccccatcgccgtccccgcattgaat 24237056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 535
Target Start/End: Complemental strand, 3628384 - 3628308
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggt 535  Q
    ||||||||| |||||  |||||||| || ||| |||| | ||| |||||||||||||||||||| ||| ||| ||||    
T  3628384 tctcgtatacttacccgttaccctatccatacccaacggggataagaaattgaatctcatccccgtccccgacgggt 3628308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 519
Target Start/End: Original strand, 17134626 - 17134686
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatc 519  Q
    |||| |||| |||||  ||||||||| | |||||||| | |||||||||||||||||||||    
T  17134626 tctcatatacttacccgttaccctactcatactcaacagggatgagaaattgaatctcatc 17134686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 35937226 - 35937142
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||| |||||| || | ||| ||||  |||||| |||||||| | ||||||||||| ||| ||||||||||||    
T  35937226 tctcatatacttacctgttaccccactcatacccaacgacgatgacaaattgaaccccatccccatccccgacgggttcgggtat 35937142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 38686332 - 38686416
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||||||| |  ||||||||||| ||  |||| | ||| |||||||||||||||||||| ||| ||| |||||| |||||    
T  38686332 tctcatatatttatccgttaccctacccttatccaacggggatcagaaattgaatctcatccccgtccccgacgggttcaggtat 38686416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 546
Target Start/End: Original strand, 44792684 - 44792772
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcat-ccccatcctcgatgggttcgggtattcc 546  Q
    |||| |||| |||||  ||||||||||| || ||||| | |||||||||||||| | ||| |||| ||| ||| |||||||||||||||    
T  44792684 tctcatatacttacccgttaccctacccatattcaacggggatgagaaattgaaccccatcccccgtccccgacgggttcgggtattcc 44792772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 450 - 582
Target Start/End: Original strand, 26755404 - 26755536
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||| | |||| ||||| |||||||||||| ||| |||| | |||||||||||||||||||||||| ||| | ||   |||||||||||| ||    
T  26755404 atcccctactcccatatacttacccattaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccaatcaattcgggtattcccgc 26755503  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | ||||| ||||| |||| ||||||||||||||    
T  26755504 cccatccccgtcctcgcaatgaatcaatttttt 26755536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 390 - 582
Target Start/End: Original strand, 13830345 - 13830537
Alignment:
Q  390 cccttaagattaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgt 488  Q
    |||||| | |||||||| |||||||| ||||||||  || |||||| |||||| | ||   || ||| | |||| |||| |||||||||||||||||| |    
T  13830345 cccttatgtttaggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacctattaccctacccat 13830444  T
Q  489 actcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    || |||| | |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||| ||||| | |||||||| ||||| ||||||||    
T  13830445 acccaacggggatgagaaattgaatcacatccccgtccccgacgggttcgggtatccccgccccatccccatccccgcattgaat-aatttttt 13830537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 582
Target Start/End: Complemental strand, 10208899 - 10208717
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcat-cttatcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| ||||||||  || |||||| |||||| | | || || ||| | |||| |||| |||||  ||||||||||| ||  |||| |     
T  10208899 taggcatggcaatggggcggggtggggacgggttttaccttccccgttctcatacccgattctcatatacttacccgttaccctacccatatccaacggg 10208800  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||| || ||| ||||||| |||||||| ||||| ||||||||    
T  10208799 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatcctcttccccgcattgaat-aatttttt 10208717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 399 - 582
Target Start/End: Original strand, 4427522 - 4427707
Alignment:
Q  399 ttaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattacccta-cccgtactcaact 496  Q
    |||||||| |||||||| | ||||||  ||  |||||||||||| |||| | || |||||||| | |||| |||| | |||||||| ||| ||  |||      
T  4427522 ttaggcatggcaatggggcagggtggggacgagttttgccttccccatcctcattccctactcccatatagttacatgttaccctaacccatatccaatg 4427621  T
Q  497 gcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | |||||||||||||||| ||||||| ||| | ||||||||||||||| | ||||||||| |||||||| |||||||||| |||||    
T  4427622 gggatgagaaattgaatcacatccccgtccccaatgggttcgggtatttcagcctcatccccgtccccgtagtgaatcaaattttt 4427707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 449 - 582
Target Start/End: Complemental strand, 24052055 - 24051924
Alignment:
Q  449 tatcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctg 548  Q
    |||||| ||||||| |||| |||||  ||||||||||| ||| |  | | |||||||||||||||||||||| | ||| | |||| |||| |||||||||    
T  24052055 tatcccttactctcatatacttacccgttaccctacccataccct-cggagatgagaaattgaatctcatccacgtccccaatggattcgagtattcctg 24051957  T
Q  549 cctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    || ||||| |||||||||||||||||||||||||    
T  24051956 ccccatcc-cgtccccgcagtgaatcaatttttt 24051924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 464 - 543
Target Start/End: Complemental strand, 37473134 - 37473055
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||||| ||||||||||| ||| |||| | |||||||||||||||||||||||||||| ||| ||||||||||||    
T  37473134 tatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcatccccatccccgacgggttcgggtat 37473055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 582
Target Start/End: Complemental strand, 24414524 - 24414419
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||| |||| | |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||| |    
T  24414524 ttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatccccgtccccgcattgaat-a 24414426  T
Q  576 atttttt 582  Q
    |||||||    
T  24414425 atttttt 24414419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 450 - 582
Target Start/End: Complemental strand, 38342963 - 38342831
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||| | |||||||| |  ||||||||||| || ||||| | ||||||||||| ||||||||| || |||   |||||||| |||||||| ||    
T  38342963 atcccctactcacatatatttatccgttaccctacccatattcaacggggatgagaaattaaatctcatctccgtccctaatgggttccggtattcccgc 38342864  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | ||||  || ||||||| ||||||||||||||    
T  38342863 cccatctccgaccccgcaatgaatcaatttttt 38342831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 502 - 582
Target Start/End: Original strand, 45115303 - 45115382
Alignment:
Q  502 gagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||||||||||||||||||||| ||| |||||||||||| || ||||||||| | |||||||| ||||| ||||||||    
T  45115303 gagaaattgaatctcatccccatccccgacgggttcgggtatccccgcctcatccccatccccgcattgaat-aatttttt 45115382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 430 - 584
Target Start/End: Original strand, 3546790 - 3546944
Alignment:
Q  430 ggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctc 528  Q
    ||||||||||||| ||||   ||||||||||||| |||| |||||  |||||||| || ||   ||| | |||||||||||||||||||||||||||| |    
T  3546790 ggttttgccttccccatccccatcccctactctcatatacttaccccttaccctatccatagctaacggggatgagaaattgaatctcatccccatcccc 3546889  T
Q  529 gatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaattttttga 584  Q
     |||||||  |||||||| ||  ||||| |||  | ||||||||||||||||||||    
T  3546890 aatgggttatggtattcccgctccatccccgt-tctgcagtgaatcaattttttga 3546944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 37999164 - 37999286
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||||||  |||| | |||||||||||||||||||||||| ||  ||| |||||||||||| || ||| ||||| |    
T  37999164 tctcatataattacccgttaccctacccgtatccaacggggatgagaaattgaatctcatccccgtctccgacgggttcgggtatccccgccccatcccc 37999263  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    || |||||| ||||| ||||||||    
T  37999264 gttcccgcattgaat-aatttttt 37999286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 30846641 - 30846746
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||| |||| | |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||| ||||| ||||| |||| ||||| |    
T  30846641 ttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatccccgtcctcgcattgaat-a 30846739  T
Q  576 atttttt 582  Q
    |||||||    
T  30846740 atttttt 30846746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 577
Target Start/End: Original strand, 44057573 - 44057651
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaat 577  Q
    ||||| |||||||||||||||||| ||| | |||||||||||||||||  || ||| | ||||||||||||||||||||    
T  44057573 gatgaaaaattgaatctcatccccgtccccaatgggttcgggtattcccaccacattcccgtccccgcagtgaatcaat 44057651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 577
Target Start/End: Original strand, 42576312 - 42576389
Alignment:
Q  500 atgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaat 577  Q
    ||||||||||||||||||||||| ||| | |||||||  ||||||||  || ||||| ||||||||||||||||||||    
T  42576312 atgagaaattgaatctcatccccgtccccaatgggttttggtattcccaccacatccccgtccccgcagtgaatcaat 42576389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 45256543 - 45256625
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||| ||  || ||||| |||||||||| ||||| ||||||||    
T  45256543 gatgagaaattgaatctcatccccgtccccgatgggtttgggtatccccaccccatccccgtccccgcattgaat-aatttttt 45256625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 544
Target Start/End: Original strand, 18485309 - 18485403
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtatt 544  Q
    |||||||||||   |||| |||||| ||||||||||| ||  |||| | |||||||||||||||| ||||||| ||| | |||||||||||||||    
T  18485309 atcccctactcctatatacttacctgttaccctacccatatccaacggggatgagaaattgaatcccatccccgtccccaatgggttcgggtatt 18485403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 582
Target Start/End: Complemental strand, 6028288 - 6028175
Alignment:
Q  469 ttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcag 568  Q
    |||||| ||||||||||  ||  |||| | |||||||||||||| | ||||||| ||| ||| |||||||||||| || ||| ||||||||||| ||||     
T  6028288 ttacctgttaccctaccaatatccaacagggatgagaaattgaaccccatccccgtccccgacgggttcgggtatccccgccccatcctcgtcctcgcat 6028189  T
Q  569 tgaatcaatttttt 582  Q
    |||||  |||||||    
T  6028188 tgaatatatttttt 6028175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 8916345 - 8916261
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  ||||||||||| ||| ||||   |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  8916345 tctcatatacttacccgttaccctacccatacccaacgaggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 8916261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 522
Target Start/End: Original strand, 10920281 - 10920405
Alignment:
Q  399 ttaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactg 497  Q
    |||||||| |||||||| ||||||||  || ||||||  ||||| |||||  || ||||| |||| |||| |||||| ||||||||||| ||  |||| |    
T  10920281 ttaggcatggcaatggggcggggtggggacgggttttatcttccccatctccataccctattctcatatacttacctgttaccctacccatatccaacgg 10920380  T
Q  498 cgatgagaaattgaatctcatcccc 522  Q
     |||||||||||||||| |||||||    
T  10920381 ggatgagaaattgaatcccatcccc 10920405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 543
Target Start/End: Original strand, 9632094 - 9632161
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||||| ||| |||| | |||||||||||||||||||||||| ||| | | ||||||||||||    
T  9632094 ttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccaacgggttcgggtat 9632161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 36128517 - 36128395
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||| |||| | ||||| |||||||||||||||||| ||| ||| |||||| ||||| || ||| ||||| |    
T  36128517 tctcatatacttacccgttaccctacccatacccaacggggatgaaaaattgaatctcatccccgtccccgacgggttcaggtatccccgccccatcccc 36128418  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||| | ||| ||||| ||||||||    
T  36128417 gtctctgcattgaat-aatttttt 36128395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 582
Target Start/End: Complemental strand, 13705754 - 13705649
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||  |||| | |||||||||||||||||||||||| | | |||| | || |||||| || ||||||||| | |||||||| ||||| |    
T  13705754 ttaccctacccatatccaacggggatgagaaattgaatctcatccccgttcccgatagatttgggtatccccgcctcatccccatccccgcattgaat-a 13705656  T
Q  576 atttttt 582  Q
    |||||||    
T  13705655 atttttt 13705649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 556
Target Start/End: Original strand, 16105343 - 16105400
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    |||||||||||||||||||||||| | | ||| |||||||||||| |||||| |||||    
T  16105343 gatgagaaattgaatctcatccccgttcccgacgggttcgggtatccctgccccatcc 16105400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 556
Target Start/End: Complemental strand, 29657210 - 29657107
Alignment:
Q  453 ccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctc 552  Q
    |||||||||| |||| |||  | ||||||| ||| |||  ||| | ||||||||||||||||||||||||  || ||| |||||||||||| || ||| |    
T  29657210 ccctactctcatatacttatttgttaccctgcccatacctaacggggatgagaaattgaatctcatccccgcccccgacgggttcgggtatacccgcccc 29657111  T
Q  553 atcc 556  Q
    ||||    
T  29657110 atcc 29657107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 556
Target Start/End: Original strand, 42995466 - 42995557
Alignment:
Q  465 atatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    ||||||| || ||||| ||||| ||| |||| | ||||||| |||||||||||||| |||||   | ||||||||||||||| ||| |||||    
T  42995466 atatttatctgttaccttacccatacccaacagggatgagagattgaatctcatcctcatccctaacgggttcgggtattcccgccacatcc 42995557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 522
Target Start/End: Original strand, 35964975 - 35965021
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatcccc 522  Q
    ||||||||||| |||||| | | ||||||||||||||||||||||||    
T  35964975 ttaccctacccatactcagcggggatgagaaattgaatctcatcccc 35965021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 526
Target Start/End: Complemental strand, 17845841 - 17845784
Alignment:
Q  469 ttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcc 526  Q
    |||||| ||||||||| | |||||||  | |||||||||||||||||||||| |||||    
T  17845841 ttacctgttaccctacgcatactcaatagggatgagaaattgaatctcatcctcatcc 17845784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 7315019 - 7314975
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||| ||||||| ||| ||| ||||||||||||    
T  7315019 gatgagaaattgaatcacatccccgtccccgacgggttcgggtat 7314975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 18106488 - 18106404
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||| |||||| ||||||||||| ||  |||| | |||||||| || |||||||||||| ||  ||| || |||||||||    
T  18106488 tctcgtatacttacctgttaccctacccatatccaacggggatgagaagttaaatctcatccccgtctccgacggattcgggtat 18106404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 37106425 - 37106469
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||||||| |||  || ||||||||||||    
T  37106425 gatgagaaattgaatctcatccccgtccctgacgggttcgggtat 37106469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 44746470 - 44746426
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||| |||||||  || ||||||||||||    
T  44746470 gatgagaaattgaatctcattcccatccctgacgggttcgggtat 44746426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 3937 - 4059
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| ||||||||| ||||||||||||| ||| |||| | |||||||||||||||| ||||||| ||| |||||||||||||||  || ||| ||||| |    
T  3937 tctcatatatttacttattaccctacccatacccaacggggatgagaaattgaatcacatccccgtccccgatgggttcgggtacccccgccccatcccc 4036  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  4037 gtccccgcattgaat-aatttttt 4059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 7e-23; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 21544181 - 21544364
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| | ||||||  || ||||||||||||| |||||  ||||||||||  | |||| ||| || ||||| ||||| ||| |||| |     
T  21544181 taggcatggcaatggggcagggtggggacgggttttgccttccccatctccatcccctacttccatatacttagctgttaccttacccatacccaacggg 21544280  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||||||||||||| ||| || ||| | ||  |||||||||||||  || ||||| |||||||||||||||||||||||||    
T  21544281 gatgagaaattgaatctaatctccgtccccaataagttcgggtattcccaccacatccccgtccccgcagtgaatcaatttttt 21544364  T

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Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 582
Target Start/End: Complemental strand, 10574921 - 10574736
Alignment:
Q  398 attaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaact 496  Q
    ||||||||| |||||||| |||| ||| |||  |||||| ||||| ||||   |||| |||||| | |||| |||||  |||||| |||| ||| ||||     
T  10574921 attaggcatggcaatggggcgggatgggaacgagttttgtcttccccatccccatcctctactcccatatacttacccgttaccccacccatacccaacg 10574822  T
Q  497 gcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |  ||||||||||||||| |||| || ||| | |||| ||||||||||||  |||||||| | |||||||||||||||||||||||    
T  10574821 ggaatgagaaattgaatcacatctccgtccccaatggattcgggtattcccacctcatccccatccccgcagtgaatcaatttttt 10574736  T

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Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 430 - 582
Target Start/End: Complemental strand, 14606370 - 14606217
Alignment:
Q  430 ggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctc 528  Q
    ||||||||||||| | || | ||||||||||| |||||| |||||| ||||||||||  ||| |||| | |||||||||||||||||||||||| ||| |    
T  14606370 ggttttgccttccacgtcctcatcccctactcccgtatacttacctgttaccctacctatacccaacggggatgagaaattgaatctcatccccgtcccc 14606271  T
Q  529 gatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
      |||| | |||||||||  || ||||| ||| ||||||||||| || ||||||    
T  14606270 attgggattgggtattcccaccccatccccgttcccgcagtgaaccattttttt 14606217  T

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Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 44317229 - 44317313
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||| ||||||||||| |||||||| | |||||||||||||||| ||||||||||| ||| ||||||||||||    
T  44317229 tctcatatacttacctgttaccctacccatactcaacggggatgagaaattgaatcccatccccatccccgacgggttcgggtat 44317313  T

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Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 568019 - 568202
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| ||||||||  || ||||||| ||||| ||| |  ||||||||||  | |||| |||||  ||||||||||| || | ||        
T  568019 taggcatggcaatggggcggggtggggacgggttttgtcttccccatttccatcccctacttccatatacttacccgttaccctacccatatttaatgag 568118  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||| ||||||| ||| | ||| |||||||||||||  || ||||| ||||| |||||||||||||||||||    
T  568119 gatgagaaattgaatcccatccccgtccccaatgagttcgggtattcccaccacatccccgtcctcgcagtgaatcaatttttt 568202  T

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Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 11027774 - 11027879
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||| | || | |||||||||||||||||||||||| ||| |||  ||||||||||| || ||||||||| |||||||||| ||||| |    
T  11027774 ttaccctacccataccctacggggatgagaaattgaatctcatccccgtccccgacaggttcgggtatccccgcctcatccccgtccccgcattgaat-a 11027872  T
Q  576 atttttt 582  Q
    |||||||    
T  11027873 atttttt 11027879  T

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Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 11172647 - 11172753
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| ||  |||| | |||||||||||||||| ||||||| ||| | |||||||||||||||||  || |||||  ||||||| |||||||||    
T  11172647 ttaccctacccatatccaacggggatgagaaattgaatcccatccccgtccccaatgggttcgggtattcccaccgcatccctgtccccgtagtgaatca 11172746  T
Q  576 atttttt 582  Q
    |||||||    
T  11172747 atttttt 11172753  T

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Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 573
Target Start/End: Original strand, 37348808 - 37348922
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||| ||||||||||| ||| |||| | ||||||||||||||  |||||| | ||| ||| |||||||||||| || ||||||||| |    
T  37348808 tctcttatacttacctgttaccctacccatacccaacggggatgagaaattgaacttcatcctcgtccccgacgggttcgggtatccccgcctcatcccc 37348907  T
Q  559 gtccccgcagtgaat 573  Q
    ||||||||| |||||    
T  37348908 gtccccgcattgaat 37348922  T

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Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 556
Target Start/End: Complemental strand, 4766725 - 4766628
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    |||| |||| |||||| |||||||| || ||| |||| | |||||||||||||||||||||||| |||| || |||||||||||| | ||||||||||    
T  4766725 tctcatatacttacctgttaccctatccatacccaacggagatgagaaattgaatctcatccccgtccttgacgggttcgggtatccttgcctcatcc 4766628  T

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Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 476 - 580
Target Start/End: Original strand, 30672652 - 30672755
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    ||||||||||| | |||||| | |||||||||||||||||||||||| ||| | |||||||| ||||||||  || ||||| ||| |||| |||||||||    
T  30672652 ttaccctacccat-ctcaacggggatgagaaattgaatctcatccccgtccccaatgggttcaggtattcccaccacatccccgttcccgtagtgaatca 30672750  T
Q  576 atttt 580  Q
    |||||    
T  30672751 atttt 30672755  T

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Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 450 - 582
Target Start/End: Complemental strand, 41915407 - 41915275
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    |||||||||||||||||| |||||| ||||||||  | || ||||| | |||||||||||||||| ||||||| ||| | || | |||||||||||   |    
T  41915407 atcccctactctcgtatacttacctgttaccctattcatattcaacggggatgagaaattgaatcgcatccccgtccccaatagattcgggtattctgac 41915308  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
     |||||   ||| ||||||||||||||||||||    
T  41915307 ttcatctctgtctccgcagtgaatcaatttttt 41915275  T

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Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 6382684 - 6382562
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||  |||| | |||||||||||||||||||||||| ||| | | |||||||||||| || ||| ||||| |    
T  6382684 tctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtccccaacgggttcgggtatccccgccccatcccc 6382585  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  6382584 gtccccgcattgaat-aatttttt 6382562  T

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Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 7608655 - 7608777
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||| ||||||||||| ||  |||| | |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||  ||||| |    
T  7608655 tctcatatacttacctgttaccctacccatatccaacggggatgagaaattgaatcccatccccgtccccgaggggttcgggtatccccgcaccatcccc 7608754  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  7608755 gtccccgcattgaat-aatttttt 7608777  T

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Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 548
Target Start/End: Complemental strand, 15987639 - 15987550
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctg 548  Q
    |||| |||| |||||| ||||||||||| ||  |||| | |||||||||||||||||||||||| ||| ||| |||||||||||| ||||    
T  15987639 tctcatatacttacctgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtatccctg 15987550  T

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Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 540
Target Start/End: Original strand, 43309092 - 43309233
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| || |||||  || |||||| |||||| |||| | || ||||| |||||||| ||||||  ||||||||||| |||||||| |     
T  43309092 taggcatggcaatggggcgtggtggggacgggttttaccttccccatcctcataccctaatctcgtatctttacccgttaccctacccatactcaacagg 43309191  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcggg 540  Q
    |||||||||||||| |||||  || ||| ||| |||||||||    
T  43309192 gatgagaaattgaacctcatatccgtccccgacgggttcggg 43309233  T

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Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 48459171 - 48459255
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  ||||||||| | |||||||| | |||||||||||||||||||||||| ||| | ||||||||||||||    
T  48459171 tctcatatacttacccgttaccctactcatactcaacggggatgagaaattgaatctcatccccgtccccaatgggttcgggtat 48459255  T

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Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 1724720 - 1724598
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||||||| |  ||||||||||| ||| |||| | |||||||||||||| ||||||||| |||  || ||||| |||||| || ||||||||| |    
T  1724720 tctcatatatttatccgttaccctacccatacccaacggggatgagaaattgaacctcatccccgtccctgacgggtttgggtatccccgcctcatcccc 1724621  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    |||||| || ||||| ||||||||    
T  1724620 gtccccacattgaat-aatttttt 1724598  T

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Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 559
Target Start/End: Complemental strand, 11123340 - 11123177
Alignment:
Q  397 gattaggcatcgcaatgggacggggtggaaaccggttttgccttcctcat-cttatcccctactctcgtatatttacctattaccctacccgtactcaac 495  Q
    |||||||||| |||||||| ||||||||  || |||||| |||||| | | |  || ||| | |||| |||| |||||| ||||||||||| ||  ||||    
T  11123340 gattaggcatggcaatggggcggggtggggacgggttttaccttccccgttcccatacccgattctcatatacttacctgttaccctacccatatccaac 11123241  T
Q  496 tgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcg 559  Q
     | ||||| |||||||||| ||||||| ||| ||| |||||||||||| || ||| ||||||||    
T  11123240 ggagatgataaattgaatcacatccccgtccccgacgggttcgggtatccccgccccatcctcg 11123177  T

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Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 15733911 - 15733828
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||  ||||||||| ||  | ||||||||||||||||| ||| |||||  ||||||| ||||||||||||||||    
T  15733911 gatgagaaattgagactcatccccgtctccaatgggttcgggtattcccgccccatccctgtccccggagtgaatcaatttttt 15733828  T

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Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 55826993 - 55826911
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||| || ||  ||||| |||||||||| ||||| ||||||||    
T  55826993 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgctccatccccgtccccgcattgaat-aatttttt 55826911  T

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Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 579
Target Start/End: Complemental strand, 16217078 - 16216964
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||| |||| | |||||||||||||||| |||||||      || |||||||||||| || ||| ||||| |    
T  16217078 tctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatcccc------gacgggttcgggtatccccgccccatcccc 16216985  T
Q  559 gtccccgcagtgaatcaattt 579  Q
    ||||||| |||||||||||||    
T  16216984 gtccccgtagtgaatcaattt 16216964  T

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Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 31918970 - 31918886
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  |||||||| || ||| |||| | |||||||||||||||| ||||||| ||| ||||||||||||||||    
T  31918970 tctcatatacttacccgttaccctatccatacccaacggggatgagaaattgaatcccatccccgtccccgatgggttcgggtat 31918886  T

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Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 582
Target Start/End: Original strand, 47103341 - 47103517
Alignment:
Q  400 taggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctta-tcccctactctcgtatatttacctattaccctacccgtactcaactgc 498  Q
    ||||||| |||||||| ||||| ||  ||  |||||||||||| ||||  | |||||||||| | |||||||| |  ||||||||||| ||  ||||       
T  47103341 taggcatggcaatggggcggggaggggacgagttttgccttccccatcccaatcccctactcccatatatttatccgttaccctacccatatccaacgag 47103440  T
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||| ||||||||      ||||||||||||||||| ||| ||||| |   |||||||||||||||||||||    
T  47103441 gatgagaaattgaatcccatcccca------atgggttcgggtattcccgccccatcc-caagcccgcagtgaatcaatttttt 47103517  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 1866979 - 1866896
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||| |||||||||||||||||| ||  |  ||||||||| |||||| ||||||||| |||| || || ||||||||||||||    
T  1866979 gatgaaaaattgaatctcatccccgtctccattgggttcggatattcccgcctcatccccgtctccacaatgaatcaatttttt 1866896  T

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Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 21423546 - 21423668
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||| | ||| |||| | ||| ||||||||||| |||| ||| ||| |||| ||||||||||| |||||| ||||| |    
T  21423546 tctcatatacttacccgttaccctactcatacacaacagggataagaaattgaatttcattcccgtccccgataggttcgggtatccctgccccatcccc 21423645  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||| ||| ||||| ||||||||    
T  21423646 gtccctgcattgaat-aatttttt 21423668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 29527511 - 29527594
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||||||||||| ||  | | |||||| | |||||  ||  |||||||||||||||| ||||||||||||||    
T  29527511 gatgagaaattgaatctcatccccgtctccaacgggttcagatattctcgctccatcctcgtccccgcattgaatcaatttttt 29527594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 31782319 - 31782402
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||||||||||||  |||||| ||| | ||||||||||||||| |  || ||||| | ||||||||||| |||||||||||    
T  31782319 gatgagaaattgaatcctatccccgtccccaatgggttcgggtatttccaccccatccccatccccgcagtggatcaatttttt 31782402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 562
Target Start/End: Original strand, 37107138 - 37107200
Alignment:
Q  500 atgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtcc 562  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||| || |||| |||| |||||    
T  37107138 atgagaaattgaacctcatccccgtcctcgacgggttcgggtatccccgccttatccccgtcc 37107200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 573
Target Start/End: Complemental strand, 47550763 - 47550649
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    ||||||||| |||||  |||||||| || ||| |||| | |||||||||||||||||||| |   ||| ||| || ||||||||| || ||| ||||| |    
T  47550763 tctcgtatacttacccgttaccctatccatacccaacggggatgagaaattgaatctcattcttgtccccgacggattcgggtatccccgccccatcccc 47550664  T
Q  559 gtccccgcagtgaat 573  Q
    ||||||||| |||||    
T  47550663 gtccccgcattgaat 47550649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 582
Target Start/End: Complemental strand, 5903086 - 5902902
Alignment:
Q  398 attaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaact 496  Q
    ||||||||| ||||| || ||||||||  || |||||| |||||| ||||   || ||| | |||| |||| |||||  ||||||||||| ||  ||||     
T  5903086 attaggcatggcaattgggcggggtggggacgggttttaccttccccatccccatacccgattctcatatacttacccgttaccctacccatatccaacg 5902987  T
Q  497 gcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
      |||||||||||||||| ||||||| |||  || |||||||||||| || ||| ||||  |||||||||| ||||| ||||||||    
T  5902986 aggatgagaaattgaatcccatccccgtccctgacgggttcgggtatccccgccccatctccgtccccgcattgaat-aatttttt 5902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 459 - 540
Target Start/End: Original strand, 43892196 - 43892277
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcggg 540  Q
    |||| |||| ||||| |||||| ||||| ||  |||| | |||||||||||||||||||||||| ||| ||| |||||||||    
T  43892196 tctcatatacttacccattaccttacccatatccaacggggatgagaaattgaatctcatccccgtccccgacgggttcggg 43892277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 586
Target Start/End: Original strand, 9230007 - 9230094
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaattttttgaat 586  Q
    |||||||||||||| | ||||||| | | ||| ||||||||||||||| || |||||  | |||||||| ||||| | ||||||||||    
T  9230007 gatgagaaattgaaccacatccccgttcccgacgggttcgggtattcccgcttcatctccatccccgcattgaataatttttttgaat 9230094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 18423293 - 18423376
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||||||||| |||||||| | ||| | ||  ||| ||||||||| ||| ||||| ||||| ||| |||||||||||||||    
T  18423293 gatgagaaattgattctcatcctcgtccccaatatgtttgggtattccagccccatccgcgtcctcgcggtgaatcaatttttt 18423376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 582
Target Start/End: Original strand, 32585213 - 32585296
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||| |||||||  || |||  ||||||||||| |  ||||||||| |||||||||| |||||  |||||||    
T  32585213 gatgagaaattgaatcacatccccgaccccgacaggttcgggtatccacgcctcatccccgtccccgcattgaatatatttttt 32585296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 543
Target Start/End: Complemental strand, 53906669 - 53906602
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||||| ||| |||| | |||||||||||||||| || |||| ||| ||||||||| ||||||    
T  53906669 ttaccctacccatacccaacggggatgagaaattgaatcccacccccgtccccgatgggtttgggtat 53906602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 565
Target Start/End: Original strand, 42774486 - 42774551
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccg 565  Q
    ||||||||||| |||||||||||| ||| ||| |||||||||||| ||  |||||||||| ||||||    
T  42774486 gatgagaaattcaatctcatccccgtcc-cgacgggttcgggtatcccaacctcatcctcatccccg 42774551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 556
Target Start/End: Complemental strand, 8844213 - 8844156
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    ||||||||||  |||||||||||| |||  || ||||||||||||||| |||||||||    
T  8844213 gatgagaaatcaaatctcatccccgtccctgacgggttcgggtattcccgcctcatcc 8844156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 556
Target Start/End: Complemental strand, 8857177 - 8857120
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    ||||||||||  |||||||||||| |||  || ||||||||||||||| |||||||||    
T  8857177 gatgagaaatcaaatctcatccccgtccctgacgggttcgggtattcccgcctcatcc 8857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 556
Target Start/End: Original strand, 30034361 - 30034418
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    |||||||||| ||||||||||||||||  ||| ||||| |||||| |||||| |||||    
T  30034361 gatgagaaatcgaatctcatccccatcaccgacgggtttgggtatccctgccccatcc 30034418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 576
Target Start/End: Complemental strand, 31416305 - 31416228
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaa 576  Q
    |||||||||||||||||||||||| | | | || ||||||||||||||  | ||||||  ||||| ||| ||||||||    
T  31416305 gatgagaaattgaatctcatccccgttcccaataggttcgggtattccgacttcatccatgtccctgcattgaatcaa 31416228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 567
Target Start/End: Original strand, 4652424 - 4652492
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgca 567  Q
    |||||||||||||||| |||||| ||||  || ||||||||| ||| | ||||||||| | ||||||||    
T  4652424 gatgagaaattgaatcccatccctatccctgacgggttcgggaatttccgcctcatccccatccccgca 4652492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 12076093 - 12076002
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    |||| |||| |||||||||| |  ||| |||| | |||||||||||||||||||||| ||||| ||| | |||||||||| || ||| |||||    
T  12076093 tatagttacatattaccctatctatacccaacggggatgagaaattgaatctcatcctcatcc-cgacgagttcgggtatccccgccccatcc 12076002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 26564516 - 26564600
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||| ||||||||||| ||  ||||   ||||||||||||||||||||| || ||| | | ||||||||||||    
T  26564516 tctcatatacttacctgttaccctacccatatccaacgaggatgagaaattgaatctcatctccgtccccaacgggttcgggtat 26564600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 42907533 - 42907577
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||| |||||||||||||||||  || ||||||||||||    
T  42907533 gatgagaaatcgaatctcatccccatcccagacgggttcgggtat 42907577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 7e-23; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 451 - 582
Target Start/End: Original strand, 2487442 - 2487573
Alignment:
Q  451 tcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcc 550  Q
    |||||||||  | |||| |||||| ||||| ||||| ||  |||| | ||||||||||||||| |||||||||||| | |||||||||||||||||  ||    
T  2487442 tcccctacttccatatacttacctgttaccttacccatatccaacggggatgagaaattgaatttcatccccatccccaatgggttcgggtattcccacc 2487541  T
Q  551 tcatcctcgtccccgcagtgaatcaatttttt 582  Q
     ||||| |||||||||| ||||||||||||||    
T  2487542 acatccccgtccccgcactgaatcaatttttt 2487573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 17146559 - 17146437
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| |||||||| | ||||| |||||||||||||||||| ||| |||||||||||||||| || ||| ||||| |    
T  17146559 tctcatatacttacccgttaccctacccatactcaacggagatgacaaattgaatctcatccccgtccccgatgggttcgggtatccccgccccatcccc 17146460  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  17146459 gtccccgcattgaat-aatttttt 17146437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 450 - 582
Target Start/End: Original strand, 23329831 - 23329963
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||||| |||| |||||  ||| |||| || ||  |||| | ||||||||||||||||||| |||| ||| | ||||||||||||||||||||    
T  23329831 atcccctactctcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcacccccttccccaatgggttcgggtattcctgc 23329930  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    | ||||| ||||||||||  ||||||| |||||    
T  23329931 cccatccccgtccccgcaacgaatcaagttttt 23329963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 480 - 582
Target Start/End: Complemental strand, 40796548 - 40796446
Alignment:
Q  480 cctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaattt 579  Q
    ||||||| |||||||| | |||||||||||||||||||||||| ||| | || ||||||||||||||  || |||||  || ||||||||||||||||||    
T  40796548 cctacccatactcaacggggatgagaaattgaatctcatccccgtccccaataggttcgggtattcccaccacatccctgttcccgcagtgaatcaattt 40796449  T
Q  580 ttt 582  Q
    |||    
T  40796448 ttt 40796446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 459 - 565
Target Start/End: Complemental strand, 44107208 - 44107102
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||| |||| | |||||||||||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |    
T  44107208 tctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtattcccgccccatcccc 44107109  T
Q  559 gtccccg 565  Q
    |||||||    
T  44107108 gtccccg 44107102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 582
Target Start/End: Complemental strand, 7470250 - 7470065
Alignment:
Q  396 agattaggcatcgcaatgggacggggtggaaaccggttttgccttcctcatcttatcccctactctcgtatatttacctattaccctacccgtactcaac 495  Q
    ||||||||||| |||||||| ||||||||  || |||||| ||||||    |  || ||| | |||| |||| |||||  ||||||||||| ||| ||||    
T  7470250 agattaggcatggcaatggggcggggtggggacgggttttaccttcccgtccccatacccgattctcatatacttacccgttaccctacccatacccaac 7470151  T
Q  496 tgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
     | |||||||||||||||||||||||| ||| ||| ||||| |||||| || ||| ||||| ||||| |||| ||||| ||||||||    
T  7470150 ggggatgagaaattgaatctcatccccgtccccgacgggtttgggtatccccgccccatccccgtcctcgcattgaat-aatttttt 7470065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 39728361 - 39728445
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||| ||||||||||| ||| |||| | |||||||||||||||||||||||||||| ||| ||||| ||||||    
T  39728361 tctcatatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcatccccatccccgacgggtttgggtat 39728445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 44179006 - 44179128
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||| ||||   |||||||||||||||||||||||| ||| |||  ||||||||||| || ||| ||||| |    
T  44179006 tctcatatacttacccgttaccctacccatacccaacgtggatgagaaattgaatctcatccccgtccccgacaggttcgggtatccccgccccatcccc 44179105  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  44179106 gtccccgcattgaat-aatttttt 44179128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 459 - 565
Target Start/End: Original strand, 44252420 - 44252526
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||| |||| | |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||| ||||| |    
T  44252420 tctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatcccc 44252519  T
Q  559 gtccccg 565  Q
    |||||||    
T  44252520 gtccccg 44252526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 476 - 556
Target Start/End: Original strand, 34154112 - 34154192
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    ||||||||||| ||| | || | |||||||||||||||||||||||| ||| ||| |||||||||||| || |||||||||    
T  34154112 ttaccctacccataccccacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgcctcatcc 34154192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 543
Target Start/End: Complemental strand, 22536236 - 22536169
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||| | ||| |||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  22536236 ttaccctactcatacccaacggggatgagaaattgaatctcatccccgtcctcgacgggttcgggtat 22536169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 459 - 573
Target Start/End: Original strand, 44638954 - 44639068
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||| |||| |  ||||||||||||||||||||||| ||| ||| |||||| | ||| || ||| |||||||    
T  44638954 tctcatatacttacccgttaccctacccatacccaacgggaatgagaaattgaatctcatccccgtccccgacgggttcagatatccccgccccatcctc 44639053  T
Q  559 gtccccgcagtgaat 573  Q
    |||||| || |||||    
T  44639054 gtccccacattgaat 44639068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 29284014 - 29284137
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctc-atcct 557  Q
    |||| |||| |||||  |||||||| || ||| |||| | |||||||||||||||| ||||||| ||| ||| |||||||||||| |||||| | | ||     
T  29284014 tctcatatacttacccgttaccctatccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtatccctgccccgacccc 29284113  T
Q  558 cgtccccgcagtgaatcaatttttt 582  Q
    |||||||||| ||||| ||||||||    
T  29284114 cgtccccgcattgaat-aatttttt 29284137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 41937458 - 41937374
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| ||||||||||| ||||||||| | ||  |||| | |||||||||||||| | ||||||| ||||||| ||||||||||||    
T  41937458 tctcatatatttacctgttaccctactcatatccaacggagatgagaaattgaaccccatccccgtcctcgacgggttcgggtat 41937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 539
Target Start/End: Original strand, 52572293 - 52572373
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgg 539  Q
    |||| |||| |||||  ||||||||||||||| |||| | |||||||||||||||| ||||||| ||| ||| ||||||||    
T  52572293 tctcatatacttacccgttaccctacccgtacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgg 52572373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 31127204 - 31127082
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||  |||| |  ||||||||||||| | ||||||| ||| ||| |||||||||||| || ||| |||||||    
T  31127204 tctcatatacttacccgttaccctacccatatccaacgggaatgagaaattgaaccccatccccgtccccgacgggttcgggtatccccgccccatcctc 31127105  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    |||| |||| ||||| ||||||||    
T  31127104 gtcctcgcattgaat-aatttttt 31127082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 44953804 - 44953722
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    |||||||||||||||| ||||||| | | |||  ||||||||||| || ||| |||||||||||||||| ||||| ||||||||    
T  44953804 gatgagaaattgaatcacatccccgttcccgacaggttcgggtatccccgccccatcctcgtccccgcattgaat-aatttttt 44953722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 556
Target Start/End: Complemental strand, 1772834 - 1772728
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    |||||||||||   |||| |||||  ||||||||| | ||| |||| | ||||||||||||||||| |||| | ||| | |||| ||||||||||| |||    
T  1772834 atcccctactccaatatacttacccgttaccctacgcatacccaacggggatgagaaattgaatcttatcctcgtccccaatggattcgggtattcatgc 1772735  T
Q  550 ctcatcc 556  Q
    |||||||    
T  1772734 ctcatcc 1772728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 29842026 - 29842070
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  29842026 gatgagaaattgaatctcatccccgtccccgacgggttcgggtat 29842070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 39655672 - 39655588
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| ||||| |||||||||||| ||| |||| | |||||||||||||||| ||||||  |||  || ||||||||||||    
T  39655672 tctcatatacttacccattaccctacccatacccaacagggatgagaaattgaatcccatccctgtccctgacgggttcgggtat 39655588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 48391219 - 48391135
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||| ||||| ||||| ||||||||   ||| |||||||||||||||||||| ||| |||  |||||||||||    
T  48391219 tctcatatacttacctgttaccttacccatactcaacgaggattagaaattgaatctcatccccgtccccgactggttcgggtat 48391135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 567
Target Start/End: Original strand, 49579783 - 49579851
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgca 567  Q
    ||||||||||||||| |||||||| ||| ||| |||||||||||| |  ||| ||||| ||||||||||    
T  49579783 gatgagaaattgaatttcatccccgtccccgaagggttcgggtatccacgccccatccccgtccccgca 49579851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 4557714 - 4557592
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| ||||||||||  |||||||| || ||| | || | |||||||||||||| ||||||||| ||| ||| ||||| ||||||  | ||| ||||| |    
T  4557714 tctcatatatttacccgttaccctatccatacccgacggggatgagaaattgaacctcatccccgtccccgacgggtttgggtatctccgccccatcccc 4557615  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    |||||| || ||||| ||||||||    
T  4557614 gtccccacattgaat-aatttttt 4557592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 543
Target Start/End: Complemental strand, 23154399 - 23154332
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    ||||||||||| || ||||| | ||||||||||| |||||||||| | ||| ||| ||||||||||||    
T  23154399 ttaccctacccatattcaacggggatgagaaattaaatctcatcctcgtccccgacgggttcgggtat 23154332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 49025361 - 49025482
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||  |||| | |||||||||||||||| |||| || | | ||| |||||||||||| || ||| ||||| |    
T  49025361 tctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatcacatcaccgttcccgacgggttcgggtatccccgccccatcc-c 49025459  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    ||||||||| ||||| ||||||||    
T  49025460 gtccccgcattgaat-aatttttt 49025482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 562
Target Start/End: Complemental strand, 55439088 - 55438986
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||  |||| | |||||||| ||||| | |||| |||||||||| ||||||||||| ||||||| ||||| |    
T  55439088 tctcatatacttacccgttaccctacccatatccaacggggatgagaagttgaaccccatctccatcctcgacgggttcgggta-tcctgccccatcccc 55438990  T
Q  559 gtcc 562  Q
    ||||    
T  55438989 gtcc 55438986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 573
Target Start/End: Original strand, 53631620 - 53631694
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaat 573  Q
    |||||||||||||| ||||||||| ||  | | |||||||||||| || ||||||||| | |||||||| |||||    
T  53631620 gatgagaaattgaacctcatccccgtcaccaacgggttcgggtatccccgcctcatccacatccccgcattgaat 53631694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 582
Target Start/End: Complemental strand, 23547370 - 23547259
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcg------atgggttcgggtattcctgcctcatcctcgtccccgcagt 569  Q
    ||||||||||| ||| |||| | |||||||||||||||  ||||||| ||| ||      | |||||||||||| || ||||||||| |||||||||| |    
T  23547370 ttaccctacccatacccaacggggatgagaaattgaattccatccccgtccccgtccccgacgggttcgggtatccccgcctcatccccgtccccgcatt 23547271  T
Q  570 gaatcaatttttt 582  Q
    |||| ||||||||    
T  23547270 gaat-aatttttt 23547259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 556
Target Start/End: Original strand, 34025678 - 34025735
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcc 556  Q
    ||||||||||||||||||| |||| ||| ||| |||||||||||| || ||| |||||    
T  34025678 gatgagaaattgaatctcagccccgtccccgacgggttcgggtatccccgccccatcc 34025735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 573
Target Start/End: Complemental strand, 48306940 - 48306831
Alignment:
Q  464 tatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccc 563  Q
    |||||||||| |||||||||| | ||  |||| |  ||||||||||||||||||| ||| | | ||| |||||| ||||| || |||||||||  |||||    
T  48306940 tatatttacccattaccctactcatatccaacgggaatgagaaattgaatctcattcccgtacccgacgggttcaggtatccccgcctcatccatgtccc 48306841  T
Q  564 cgcagtgaat 573  Q
    | || |||||    
T  48306840 cacattgaat 48306831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 572
Target Start/End: Original strand, 52197871 - 52197944
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaa 572  Q
    ||||||||||| |||||||||||| ||| ||| |||||||| ||| || ||| ||||| |||| ||||| ||||    
T  52197871 gatgagaaattaaatctcatccccgtccccgacgggttcggttatccccgccccatccccgtctccgcattgaa 52197944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 430 - 582
Target Start/End: Original strand, 211008 - 211161
Alignment:
Q  430 ggttttgccttcctcatctt-atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctc 528  Q
    ||||||||||||| | || | ||||||||||| |||||| |||||| ||||||||||  ||| |||| | |||||||||||||||||||||||| ||| |    
T  211008 ggttttgccttccacgtcctcatcccctactcccgtatacttacctgttaccctacctatacccaacggggatgagaaattgaatctcatccccgtcccc 211107  T
Q  529 gatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaatttttt 582  Q
      |||| | |||||||||  || ||||| ||| ||||||||||| || ||||||    
T  211108 attgggattgggtattcccaccccatccccgttcccgcagtgaaccattttttt 211161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 567
Target Start/End: Original strand, 14456 - 14564
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||| | ||||||||||| || ||||| | |||||||||||||| | |||| |||||||||||||||| | |||| ||| || ||||| |    
T  14456 tctcatatacttacttgttaccctacccatattcaacggggatgagaaattgaaccccatctccatcctcgatgggtttgagtatccctaccccatcccc 14555  T
Q  559 gtccccgca 567  Q
    |||||||||    
T  14556 gtccccgca 14564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 450 - 582
Target Start/End: Original strand, 69740 - 69872
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||| | |||  |||||  ||||| ||||| ||| ||||   |||| ||||||||||  ||||||  ||| | |||||||||||||||||  |    
T  69740 atcccctactcccatatgcttacccgttaccttacccatacccaacatggatgtgaaattgaattccatccctgtccccaatgggttcgggtattcccac 69839  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||| |||||||| ||||||||||||||||    
T  69840 ctcatccccgtccccgtagtgaatcaatttttt 69872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 543
Target Start/End: Original strand, 9998 - 10065
Alignment:
Q  476 ttaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||| || |||||||| | |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  9998 ttaccctatccatactcaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtat 10065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 582
Target Start/End: Complemental strand, 105912 - 105780
Alignment:
Q  450 atcccctactctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgc 549  Q
    ||||||||||| | |||  |||||  ||||| ||||| ||| ||||   |||| ||||||||||  ||||||  ||| | ||||||| |||||||||  |    
T  105912 atcccctactcccatatgcttacccgttaccttacccatacccaacatggatgtgaaattgaattccatccctgtccccaatgggtttgggtattcccac 105813  T
Q  550 ctcatcctcgtccccgcagtgaatcaatttttt 582  Q
    ||||||| |||||||| ||||||||||||||||    
T  105812 ctcatccccgtccccgtagtgaatcaatttttt 105780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 575
Target Start/End: Complemental strand, 128482 - 128406
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatca 575  Q
    |||| ||||||||||  ||||||  ||| | || ||||||||||||||  |||||||||||||||||||||||||||    
T  128482 gatgtgaaattgaattccatccctgtccccaataggttcgggtattcccacctcatcctcgtccccgcagtgaatca 128406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 582
Target Start/End: Original strand, 33074 - 33196
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||  ||||||||||| ||| |||| |  ||||||||||||||||||||||| ||| ||| || ||||||||| ||  || ||||| |    
T  33074 tctcatatacttacccgttaccctacccatacccaacgggaatgagaaattgaatctcatccccgtccccgacggattcgggtatccccaccacatcccc 33173  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
     |||||||| ||||| ||||||||    
T  33174 atccccgcattgaat-aatttttt 33196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 582
Target Start/End: Complemental strand, 14553 - 14432
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctc 558  Q
    |||| |||| |||||| ||||||||||| ||| |||| | |||||||||||||| | |||| || ||| ||| |||||||||||| || ||| ||||| |    
T  14553 tctcatatacttacctgttaccctacccatacccaacagggatgagaaattgaaccccatctccgtcc-cgacgggttcgggtatccccgccccatcccc 14455  T
Q  559 gtccccgcagtgaatcaatttttt 582  Q
    |||| |||| ||||| ||||||||    
T  14454 gtcctcgcattgaat-aatttttt 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 32893 - 32849
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  32893 gatgagaaattgaatctcatccccgtccccgacgggttcgggtat 32849  T

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Target: scaffold0135 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 586
Target Start/End: Original strand, 35873 - 35960
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgggtattcctgcctcatcctcgtccccgcagtgaatcaattttttgaat 586  Q
    |||||||||||||| | ||||||| | | ||| ||||||||||||||| || |||||  | |||||||| ||||| | ||||||||||    
T  35873 gatgagaaattgaaccacatccccgttcccgacgggttcgggtattcccgcttcatctccatccccgcattgaataatttttttgaat 35960  T

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Target: scaffold1630 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 539
Target Start/End: Original strand, 1342 - 1382
Alignment:
Q  499 gatgagaaattgaatctcatccccatcctcgatgggttcgg 539  Q
    ||||||||||||||||||||| |||||| ||| ||||||||    
T  1342 gatgagaaattgaatctcatctccatccccgacgggttcgg 1382  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 90276 - 90360
Alignment:
Q  459 tctcgtatatttacctattaccctacccgtactcaactgcgatgagaaattgaatctcatccccatcctcgatgggttcgggtat 543  Q
    |||| |||| |||||  |||||||| || ||| |||| | |||||||||||||| ||||||||| ||| ||| ||||| ||||||    
T  90276 tctcatatacttacccgttaccctatccatacccaacagggatgagaaattgaacctcatccccgtccccgacgggtttgggtat 90360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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