View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0655-Insertion-7 (Length: 475)
Name: NF0655-Insertion-7
Description: NF0655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0655-Insertion-7 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 424; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 24 - 475
Target Start/End: Original strand, 2694716 - 2695167
Alignment:
| Q |
24 |
taaagttttggaacatttattgtatgactctcttattaagtagataaggaaacttaacaacttaagtcatgagagaatctcatgccataaatcactcttt |
123 |
Q |
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| T |
2694716 |
taaagttttggaacatttattgtatgactctcttattaagtagataaggaaacttaacaacttaagtcatgagagaatctcatgccataaatcactcttt |
2694815 |
T |
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| Q |
124 |
tgaattgaactaccatcatagacttaagccataacattcatatttcataaaacaatgattagttacataattgaaatggcaatattcaacaataaaaaac |
223 |
Q |
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| T |
2694816 |
tgaattgaattaccatcatagacttaagccataacattcatatttcataaaacaatgattagttacataattgaagtggcaatattcaacaataaaaaac |
2694915 |
T |
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| Q |
224 |
taatcagagtccactcataacacttaagaatttcctcatatttcagacatggtttttattatcaagtcttgtcttgtccctctctttgtgacttaaagat |
323 |
Q |
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| T |
2694916 |
taatcagagtcctctcataacacttaagaatttcctcatatttcagacatggttttcattatcaagtcttgtcttgtccctctctttgtgacttaaagat |
2695015 |
T |
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| Q |
324 |
gtagccttttcatctttgttccccattgacacttgagtcttttgcaatttgatgttgaaattgaatgagagcccataatgctataacatatttagctgtt |
423 |
Q |
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||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
2695016 |
gtagcattttcatctttgttccccattggcacttgagtcttttgcaatttgatgttgaaattgaatgagagtccataatgctataacatatttagctgtt |
2695115 |
T |
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| Q |
424 |
ctcctaattaagagcactatcatactacacaaataatcaggcctagtgttca |
475 |
Q |
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| T |
2695116 |
ctcctaattaagagcactatcatactacacaaataatcaggcctagtgttca |
2695167 |
T |
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