View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0656_low_8 (Length: 361)

Name: NF0656_low_8
Description: NF0656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0656_low_8
NF0656_low_8
[»] chr5 (31 HSPs)
chr5 (224-361)||(21871359-21871496)
chr5 (224-361)||(21875639-21875776)
chr5 (224-333)||(24767152-24767262)
chr5 (225-333)||(22120008-22120119)
chr5 (276-361)||(5888963-5889049)
chr5 (12-58)||(21871662-21871708)
chr5 (12-58)||(21875942-21875988)
chr5 (276-361)||(22959321-22959407)
chr5 (11-54)||(24767431-24767474)
chr5 (276-333)||(21329311-21329369)
chr5 (276-361)||(21741331-21741417)
chr5 (224-309)||(22144247-22144332)
chr5 (287-361)||(21501942-21502015)
chr5 (276-361)||(21565791-21565877)
chr5 (276-333)||(26011850-26011907)
chr5 (123-155)||(10753613-10753645)
chr5 (258-309)||(21731299-21731350)
chr5 (258-309)||(21809419-21809470)
chr5 (276-361)||(19669146-19669232)
chr5 (259-309)||(20572119-20572169)
chr5 (223-309)||(36154667-36154753)
chr5 (223-301)||(43121356-43121434)
chr5 (223-301)||(43124889-43124967)
chr5 (224-309)||(11581084-11581169)
chr5 (15-58)||(5889275-5889319)
chr5 (257-361)||(9078182-9078285)
chr5 (276-332)||(20026756-20026812)
chr5 (123-155)||(21871565-21871597)
chr5 (123-155)||(21875845-21875877)
chr5 (123-155)||(22120189-22120221)
chr5 (15-58)||(29915173-29915217)
[»] chr4 (57 HSPs)
chr4 (224-333)||(24028937-24029047)
chr4 (224-333)||(20157105-20157215)
chr4 (225-333)||(22634028-22634137)
chr4 (224-333)||(3332081-3332191)
chr4 (224-333)||(13812624-13812734)
chr4 (224-332)||(32851571-32851680)
chr4 (276-361)||(15190564-15190650)
chr4 (224-309)||(15868549-15868634)
chr4 (12-58)||(630865-630911)
chr4 (12-58)||(15868800-15868846)
chr4 (274-361)||(8846619-8846707)
chr4 (276-361)||(15099597-15099683)
chr4 (223-301)||(15464777-15464855)
chr4 (225-309)||(14825666-14825750)
chr4 (223-301)||(10313908-10313986)
chr4 (276-333)||(12774246-12774304)
chr4 (12-54)||(22634307-22634349)
chr4 (12-54)||(32851360-32851402)
chr4 (223-309)||(44102406-44102492)
chr4 (223-309)||(52243032-52243118)
chr4 (12-58)||(13812900-13812946)
chr4 (276-333)||(39706103-39706161)
chr4 (223-309)||(44928762-44928848)
chr4 (123-155)||(630768-630800)
chr4 (123-155)||(13812803-13812835)
chr4 (123-155)||(14953955-14953987)
chr4 (123-155)||(14953999-14954031)
chr4 (19-51)||(14954101-14954133)
chr4 (123-155)||(15225133-15225165)
chr4 (123-155)||(25690112-25690144)
chr4 (123-155)||(25690156-25690188)
chr4 (123-155)||(32851469-32851501)
chr4 (276-332)||(46640272-46640328)
chr4 (123-153)||(10713102-10713132)
chr4 (123-153)||(10926872-10926902)
chr4 (123-153)||(12487960-12487990)
chr4 (259-309)||(13591765-13591815)
chr4 (223-361)||(14038844-14038981)
chr4 (259-309)||(17333512-17333562)
chr4 (223-301)||(31116901-31116979)
chr4 (277-323)||(43198380-43198426)
chr4 (223-301)||(55502596-55502674)
chr4 (123-152)||(15868706-15868735)
chr4 (223-292)||(16223728-16223797)
chr4 (223-288)||(23803089-23803154)
chr4 (223-288)||(43251188-43251253)
chr4 (223-288)||(56115461-56115526)
chr4 (123-155)||(3331980-3332012)
chr4 (19-51)||(10712993-10713025)
chr4 (19-51)||(10926763-10926795)
chr4 (19-51)||(12487851-12487883)
chr4 (123-155)||(15225327-15225359)
chr4 (268-324)||(16043253-16043309)
chr4 (123-155)||(20157284-20157316)
chr4 (123-155)||(22634207-22634239)
chr4 (19-51)||(25690010-25690042)
chr4 (15-58)||(52873257-52873301)
[»] scaffold0192 (2 HSPs)
scaffold0192 (224-333)||(10106-10216)
scaffold0192 (19-58)||(9850-9889)
[»] scaffold0075 (3 HSPs)
scaffold0075 (227-333)||(8109-8216)
scaffold0075 (12-58)||(8385-8431)
scaffold0075 (123-155)||(8288-8320)
[»] scaffold0166 (2 HSPs)
scaffold0166 (224-333)||(9649-9759)
scaffold0166 (11-54)||(9928-9971)
[»] chr7 (47 HSPs)
chr7 (224-333)||(2832120-2832230)
chr7 (224-333)||(9751365-9751475)
chr7 (224-333)||(39267461-39267571)
chr7 (224-333)||(18302374-18302484)
chr7 (223-333)||(2529868-2529978)
chr7 (276-361)||(67993-68079)
chr7 (276-361)||(16056576-16056661)
chr7 (276-353)||(22073164-22073241)
chr7 (223-309)||(14036394-14036480)
chr7 (223-309)||(14346424-14346510)
chr7 (276-361)||(44014421-44014507)
chr7 (223-309)||(2279957-2280043)
chr7 (276-361)||(9389483-9389569)
chr7 (223-309)||(14044944-14045030)
chr7 (223-309)||(14354974-14355060)
chr7 (276-333)||(16324254-16324311)
chr7 (224-301)||(35366421-35366498)
chr7 (12-54)||(9751641-9751683)
chr7 (223-309)||(16091953-16092039)
chr7 (287-333)||(16219532-16219578)
chr7 (276-332)||(15116729-15116785)
chr7 (262-361)||(38227715-38227813)
chr7 (223-309)||(9177504-9177590)
chr7 (223-309)||(15008337-15008423)
chr7 (276-333)||(15754703-15754761)
chr7 (12-58)||(18302142-18302188)
chr7 (12-58)||(39267781-39267827)
chr7 (276-332)||(15113192-15113248)
chr7 (123-155)||(18425687-18425719)
chr7 (123-155)||(18425889-18425921)
chr7 (123-155)||(39267640-39267672)
chr7 (123-155)||(39267684-39267716)
chr7 (278-333)||(11995845-11995900)
chr7 (223-294)||(38898275-38898346)
chr7 (223-301)||(124040-124118)
chr7 (259-309)||(9033184-9033234)
chr7 (259-309)||(9725498-9725548)
chr7 (123-153)||(45169833-45169863)
chr7 (268-309)||(13892832-13892873)
chr7 (276-333)||(28505116-28505173)
chr7 (123-155)||(9751544-9751576)
chr7 (15-58)||(14270144-14270188)
chr7 (15-58)||(17232598-17232642)
chr7 (123-155)||(18302253-18302285)
chr7 (123-155)||(18426089-18426121)
chr7 (19-51)||(45169940-45169972)
chr7 (15-58)||(45847740-45847784)
[»] chr3 (64 HSPs)
chr3 (224-333)||(14665801-14665911)
chr3 (224-333)||(14668956-14669066)
chr3 (224-333)||(14735314-14735424)
chr3 (224-333)||(4588603-4588713)
chr3 (224-333)||(12852179-12852289)
chr3 (224-319)||(45797363-45797458)
chr3 (224-319)||(14501319-14501414)
chr3 (225-332)||(23413065-23413174)
chr3 (276-361)||(1465197-1465283)
chr3 (276-361)||(12171892-12171978)
chr3 (12-58)||(12852459-12852505)
chr3 (12-54)||(14668746-14668788)
chr3 (276-361)||(16097577-16097663)
chr3 (223-309)||(23274884-23274970)
chr3 (12-54)||(23413344-23413386)
chr3 (12-54)||(45797152-45797194)
chr3 (262-333)||(12339986-12340058)
chr3 (276-333)||(13210143-13210201)
chr3 (12-54)||(14665590-14665632)
chr3 (276-333)||(32307916-32307974)
chr3 (223-301)||(42386607-42386685)
chr3 (223-332)||(17672818-17672927)
chr3 (123-155)||(12852362-12852394)
chr3 (123-155)||(14501217-14501249)
chr3 (123-155)||(16750017-16750049)
chr3 (123-155)||(16750413-16750445)
chr3 (123-155)||(19776017-19776049)
chr3 (123-155)||(37439461-37439493)
chr3 (123-155)||(45797261-45797293)
chr3 (287-319)||(49389459-49389491)
chr3 (223-302)||(603486-603565)
chr3 (276-315)||(1644517-1644556)
chr3 (276-319)||(12934141-12934184)
chr3 (287-353)||(14234749-14234816)
chr3 (287-333)||(15471183-15471230)
chr3 (12-58)||(18439947-18439994)
chr3 (258-309)||(37427945-37427996)
chr3 (223-302)||(54046908-54046987)
chr3 (259-361)||(324466-324568)
chr3 (223-309)||(2051038-2051124)
chr3 (123-153)||(4107224-4107254)
chr3 (123-153)||(4111076-4111106)
chr3 (223-309)||(12378118-12378204)
chr3 (12-54)||(14501108-14501150)
chr3 (123-153)||(15965221-15965251)
chr3 (123-153)||(15969145-15969175)
chr3 (123-153)||(15973069-15973099)
chr3 (276-333)||(49667899-49667957)
chr3 (223-309)||(52523566-52523652)
chr3 (276-361)||(37250954-37251039)
chr3 (265-309)||(316357-316401)
chr3 (19-51)||(4107331-4107363)
chr3 (19-51)||(4111183-4111215)
chr3 (123-155)||(4588784-4588816)
chr3 (123-155)||(8489290-8489322)
chr3 (19-51)||(15965112-15965144)
chr3 (19-51)||(15969036-15969068)
chr3 (19-51)||(15972960-15972992)
chr3 (278-333)||(16104030-16104086)
chr3 (123-155)||(16749819-16749851)
chr3 (123-155)||(16750215-16750247)
chr3 (123-155)||(23413244-23413276)
chr3 (19-51)||(37439570-37439602)
chr3 (276-332)||(43927382-43927438)
[»] scaffold0221 (2 HSPs)
scaffold0221 (224-333)||(12624-12733)
scaffold0221 (123-155)||(12802-12834)
[»] scaffold0124 (3 HSPs)
scaffold0124 (224-319)||(24481-24576)
scaffold0124 (12-58)||(24745-24791)
scaffold0124 (123-155)||(24648-24680)
[»] scaffold0037 (1 HSPs)
scaffold0037 (224-333)||(80147-80257)
[»] scaffold0016 (2 HSPs)
scaffold0016 (224-319)||(207349-207444)
scaffold0016 (123-155)||(207513-207545)
[»] chr6 (49 HSPs)
chr6 (224-333)||(27325249-27325359)
chr6 (224-333)||(21939578-21939689)
chr6 (276-361)||(4668001-4668086)
chr6 (276-361)||(4674848-4674933)
chr6 (276-361)||(4189204-4189289)
chr6 (276-361)||(4185611-4185696)
chr6 (276-361)||(27333072-27333157)
chr6 (276-361)||(27393812-27393897)
chr6 (280-361)||(31155186-31155267)
chr6 (223-309)||(25644518-25644604)
chr6 (276-361)||(19668621-19668706)
chr6 (276-333)||(1561550-1561608)
chr6 (223-309)||(18456911-18456997)
chr6 (223-309)||(18696683-18696769)
chr6 (276-361)||(19652442-19652528)
chr6 (123-155)||(16624381-16624413)
chr6 (123-155)||(22949350-22949382)
chr6 (123-155)||(22949394-22949426)
chr6 (123-155)||(22953306-22953338)
chr6 (123-155)||(22953350-22953382)
chr6 (276-352)||(23019655-23019731)
chr6 (123-155)||(23871794-23871826)
chr6 (123-155)||(23871838-23871870)
chr6 (123-155)||(23875750-23875782)
chr6 (123-155)||(23875794-23875826)
chr6 (123-155)||(27325428-27325460)
chr6 (123-155)||(31477635-31477667)
chr6 (258-309)||(16493378-16493429)
chr6 (123-153)||(16760544-16760574)
chr6 (223-301)||(16812971-16813049)
chr6 (223-301)||(16829991-16830069)
chr6 (259-309)||(20078013-20078063)
chr6 (259-309)||(20224175-20224225)
chr6 (259-309)||(22118159-22118209)
chr6 (276-333)||(28496289-28496346)
chr6 (276-333)||(29808700-29808757)
chr6 (223-309)||(33443241-33443327)
chr6 (223-283)||(15539472-15539533)
chr6 (19-51)||(16624272-16624304)
chr6 (19-51)||(16760435-16760467)
chr6 (269-309)||(18706548-18706588)
chr6 (19-51)||(22949248-22949280)
chr6 (19-51)||(22953204-22953236)
chr6 (19-51)||(23871692-23871724)
chr6 (19-51)||(23875648-23875680)
chr6 (257-301)||(25629202-25629246)
chr6 (15-58)||(25956721-25956765)
chr6 (19-51)||(31477744-31477776)
chr6 (15-58)||(31630627-31630671)
[»] scaffold0347 (2 HSPs)
scaffold0347 (223-333)||(223-334)
scaffold0347 (123-155)||(16-48)
[»] scaffold0235 (3 HSPs)
scaffold0235 (224-319)||(13759-13854)
scaffold0235 (12-54)||(13548-13590)
scaffold0235 (123-155)||(13657-13689)
[»] scaffold0475 (1 HSPs)
scaffold0475 (276-361)||(9324-9409)
[»] chr1 (32 HSPs)
chr1 (276-361)||(49261588-49261674)
chr1 (223-309)||(16758847-16758933)
chr1 (276-333)||(52927797-52927854)
chr1 (276-361)||(35981474-35981560)
chr1 (276-333)||(21754284-21754341)
chr1 (276-361)||(20637097-20637183)
chr1 (276-361)||(28194236-28194322)
chr1 (276-332)||(12271796-12271852)
chr1 (287-353)||(20248535-20248602)
chr1 (223-302)||(24087611-24087690)
chr1 (276-333)||(22237877-22237935)
chr1 (276-333)||(22921683-22921741)
chr1 (259-309)||(35260919-35260969)
chr1 (123-155)||(1924954-1924986)
chr1 (123-155)||(20923968-20924000)
chr1 (276-332)||(21861385-21861441)
chr1 (276-328)||(21896078-21896130)
chr1 (123-155)||(39243966-39243998)
chr1 (123-155)||(39247521-39247553)
chr1 (123-155)||(41388071-41388103)
chr1 (258-309)||(52940716-52940767)
chr1 (226-288)||(294401-294463)
chr1 (276-361)||(33681256-33681342)
chr1 (268-309)||(21342334-21342375)
chr1 (268-309)||(21347199-21347240)
chr1 (224-309)||(26065136-26065221)
chr1 (19-51)||(1925063-1925095)
chr1 (276-324)||(16368110-16368158)
chr1 (19-51)||(20924077-20924109)
chr1 (15-58)||(28194549-28194593)
chr1 (123-155)||(41387873-41387905)
chr1 (15-58)||(43543087-43543131)
[»] scaffold0138 (2 HSPs)
scaffold0138 (276-353)||(13188-13265)
scaffold0138 (287-332)||(18053-18098)
[»] scaffold0034 (1 HSPs)
scaffold0034 (276-353)||(32784-32861)
[»] scaffold0123 (1 HSPs)
scaffold0123 (223-324)||(25302-25403)
[»] scaffold0556 (1 HSPs)
scaffold0556 (276-361)||(7058-7144)
[»] scaffold0357 (2 HSPs)
scaffold0357 (223-309)||(13326-13412)
scaffold0357 (223-309)||(15938-16024)
[»] scaffold0125 (1 HSPs)
scaffold0125 (276-361)||(45578-45664)
[»] scaffold0020 (1 HSPs)
scaffold0020 (276-353)||(15626-15704)
[»] scaffold0012 (3 HSPs)
scaffold0012 (223-309)||(225603-225689)
scaffold0012 (123-153)||(189204-189234)
scaffold0012 (19-51)||(189311-189343)
[»] scaffold0010 (2 HSPs)
scaffold0010 (276-361)||(130154-130240)
scaffold0010 (223-306)||(60556-60639)
[»] chr2 (17 HSPs)
chr2 (223-309)||(23708457-23708543)
chr2 (276-333)||(28406226-28406284)
chr2 (225-302)||(12627737-12627814)
chr2 (223-309)||(19672024-19672109)
chr2 (276-333)||(22134031-22134089)
chr2 (224-309)||(20520031-20520116)
chr2 (123-155)||(1283676-1283708)
chr2 (262-361)||(23076677-23076774)
chr2 (123-155)||(30344816-30344848)
chr2 (223-309)||(22412974-22413060)
chr2 (223-309)||(23004946-23005032)
chr2 (223-301)||(31756111-31756189)
chr2 (276-333)||(23207527-23207584)
chr2 (19-51)||(1283529-1283561)
chr2 (276-332)||(22459377-22459433)
chr2 (276-324)||(23791524-23791572)
chr2 (19-51)||(30344925-30344957)
[»] scaffold1765 (1 HSPs)
scaffold1765 (276-333)||(1331-1388)
[»] scaffold0261 (3 HSPs)
scaffold0261 (244-332)||(18159-18248)
scaffold0261 (123-153)||(18333-18363)
scaffold0261 (12-54)||(18431-18473)
[»] scaffold0333 (2 HSPs)
scaffold0333 (274-353)||(6858-6938)
scaffold0333 (274-353)||(14238-14318)
[»] scaffold0218 (2 HSPs)
scaffold0218 (276-360)||(7864-7948)
scaffold0218 (276-333)||(29095-29152)
[»] scaffold0142 (2 HSPs)
scaffold0142 (270-333)||(7586-7650)
scaffold0142 (12-58)||(7739-7785)
[»] scaffold0047 (1 HSPs)
scaffold0047 (225-309)||(22476-22560)
[»] scaffold0005 (1 HSPs)
scaffold0005 (225-309)||(13959-14043)
[»] scaffold1052 (1 HSPs)
scaffold1052 (11-54)||(3093-3136)
[»] scaffold1257 (1 HSPs)
scaffold1257 (276-333)||(2032-2090)
[»] scaffold0211 (1 HSPs)
scaffold0211 (276-333)||(28625-28683)
[»] scaffold0023 (2 HSPs)
scaffold0023 (276-361)||(39960-40046)
scaffold0023 (276-319)||(101642-101685)
[»] chr8 (31 HSPs)
chr8 (276-361)||(26355486-26355572)
chr8 (276-361)||(39834079-39834165)
chr8 (276-333)||(21285846-21285903)
chr8 (276-338)||(6520616-6520678)
chr8 (223-309)||(40492691-40492777)
chr8 (276-333)||(23760656-23760713)
chr8 (123-155)||(18862470-18862502)
chr8 (123-155)||(21387326-21387358)
chr8 (123-155)||(21411199-21411231)
chr8 (123-155)||(21805691-21805723)
chr8 (123-155)||(21827839-21827871)
chr8 (225-309)||(41598382-41598466)
chr8 (278-333)||(21255470-21255525)
chr8 (223-309)||(19154724-19154810)
chr8 (259-309)||(20533247-20533297)
chr8 (259-309)||(22963258-22963308)
chr8 (259-309)||(23668041-23668091)
chr8 (223-301)||(24707655-24707733)
chr8 (259-309)||(37515937-37515987)
chr8 (223-288)||(364150-364215)
chr8 (276-333)||(5866092-5866149)
chr8 (224-309)||(14103063-14103148)
chr8 (296-333)||(21249650-21249687)
chr8 (15-58)||(1327125-1327169)
chr8 (19-51)||(18862579-18862611)
chr8 (19-51)||(21827948-21827980)
chr8 (276-324)||(22364911-22364959)
chr8 (257-309)||(22875295-22875347)
chr8 (276-332)||(24353273-24353329)
chr8 (15-58)||(27472396-27472440)
chr8 (15-58)||(38550091-38550135)
[»] scaffold1137 (1 HSPs)
scaffold1137 (289-333)||(2117-2162)
[»] scaffold0078 (1 HSPs)
scaffold0078 (276-361)||(10776-10861)
[»] scaffold0098 (1 HSPs)
scaffold0098 (272-331)||(26832-26892)
[»] scaffold0076 (1 HSPs)
scaffold0076 (229-309)||(24436-24516)
[»] scaffold0810 (1 HSPs)
scaffold0810 (276-333)||(3179-3237)
[»] scaffold0780 (1 HSPs)
scaffold0780 (223-301)||(3174-3252)
[»] scaffold0555 (1 HSPs)
scaffold0555 (276-326)||(10363-10413)
[»] scaffold0165 (1 HSPs)
scaffold0165 (223-293)||(27521-27591)
[»] scaffold0107 (1 HSPs)
scaffold0107 (223-309)||(9923-10009)
[»] scaffold0621 (1 HSPs)
scaffold0621 (287-332)||(8729-8774)
[»] scaffold0001 (1 HSPs)
scaffold0001 (223-332)||(85440-85549)
[»] scaffold0413 (2 HSPs)
scaffold0413 (223-307)||(15456-15540)
scaffold0413 (276-361)||(12817-12902)
[»] scaffold0217 (1 HSPs)
scaffold0217 (257-361)||(16388-16491)
[»] scaffold0141 (2 HSPs)
scaffold0141 (223-303)||(33340-33420)
scaffold0141 (19-51)||(14021-14053)
[»] scaffold0080 (2 HSPs)
scaffold0080 (123-155)||(48979-49011)
scaffold0080 (276-333)||(19699-19756)
[»] scaffold0049 (1 HSPs)
scaffold0049 (223-303)||(81392-81472)
[»] scaffold0507 (1 HSPs)
scaffold0507 (276-331)||(7875-7930)
[»] scaffold0120 (2 HSPs)
scaffold0120 (262-361)||(32747-32845)
scaffold0120 (262-361)||(46160-46258)
[»] scaffold0070 (1 HSPs)
scaffold0070 (257-360)||(4753-4855)
[»] scaffold1984 (1 HSPs)
scaffold1984 (276-361)||(377-463)
[»] scaffold0628 (1 HSPs)
scaffold0628 (276-333)||(2618-2676)
[»] scaffold0476 (1 HSPs)
scaffold0476 (276-333)||(13015-13073)
[»] scaffold0415 (2 HSPs)
scaffold0415 (123-153)||(646-676)
scaffold0415 (19-51)||(537-569)
[»] scaffold0293 (1 HSPs)
scaffold0293 (259-309)||(17734-17784)
[»] scaffold0229 (2 HSPs)
scaffold0229 (123-153)||(11328-11358)
scaffold0229 (19-51)||(11435-11467)
[»] scaffold0207 (1 HSPs)
scaffold0207 (276-333)||(2459-2517)
[»] scaffold0169 (1 HSPs)
scaffold0169 (259-309)||(29262-29312)
[»] scaffold0157 (2 HSPs)
scaffold0157 (123-153)||(32487-32517)
scaffold0157 (19-51)||(32594-32626)
[»] scaffold0102 (1 HSPs)
scaffold0102 (276-333)||(19513-19571)
[»] scaffold0077 (1 HSPs)
scaffold0077 (259-309)||(55523-55573)
[»] scaffold0031 (2 HSPs)
scaffold0031 (123-153)||(35913-35943)
scaffold0031 (19-51)||(36020-36052)
[»] scaffold0028 (1 HSPs)
scaffold0028 (276-333)||(132900-132958)
[»] scaffold0009 (2 HSPs)
scaffold0009 (231-309)||(85749-85827)
scaffold0009 (15-58)||(85225-85269)
[»] scaffold0737 (1 HSPs)
scaffold0737 (276-361)||(1584-1669)
[»] scaffold0356 (1 HSPs)
scaffold0356 (224-309)||(500-585)
[»] scaffold1403 (1 HSPs)
scaffold1403 (276-324)||(798-846)
[»] scaffold1351 (1 HSPs)
scaffold1351 (276-332)||(255-311)
[»] scaffold0676 (1 HSPs)
scaffold0676 (19-51)||(591-623)
[»] scaffold0228 (3 HSPs)
scaffold0228 (257-309)||(4737-4789)
scaffold0228 (257-309)||(12319-12371)
scaffold0228 (257-309)||(22271-22323)
[»] scaffold0116 (1 HSPs)
scaffold0116 (15-58)||(43884-43928)
[»] scaffold0100 (1 HSPs)
scaffold0100 (15-58)||(36148-36192)
[»] scaffold0084 (1 HSPs)
scaffold0084 (257-309)||(10393-10445)


Alignment Details
Target: chr5 (Bit Score: 114; Significance: 9e-58; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 224 - 361
Target Start/End: Complemental strand, 21871496 - 21871359
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaag 323  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  21871496 cttcacatatcatcattaatatcatacatattcctcattactatcccaaggttcaactcataacaactcatgcgacaaggatcgcgtttaacctagcaag 21871397  T
Q  324 gcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21871396 gcattctgtatttggttagctcgcgagccgggagcctc 21871359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 224 - 361
Target Start/End: Complemental strand, 21875776 - 21875639
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaag 323  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  21875776 cttcacatatcatcattaatatcatacatattcctcattactatcccaaggttcaactcataacaactcatgcgacaaggatcgcgtttaacctagcaag 21875677  T
Q  324 gcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21875676 gcattctgtatttggttagctcgcgagccgggagcctc 21875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 24767262 - 24767152
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  24767262 cttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaa 24767163  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  24767162 ggcattctgta 24767152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 225 - 333
Target Start/End: Complemental strand, 22120119 - 22120008
Alignment:
Q  225 ttcacagatcatcattaatatcatacatatc--cctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aaca 321  Q
    |||||| |||||||||||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  22120119 ttcacatatcatcattaatatcatatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcgcatttaacctaaaca 22120020  T
Q  322 aggcattctgta 333  Q
    ||||||||||||    
T  22120019 aggcattctgta 22120008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 5889049 - 5888963
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    ||||||||||||| | |||||||||| ||||||||||||||| ||||||||||||||||  ||| |||||||||||||| |||||||    
T  5889049 tcaactcataacatcacgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctc 5888963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 21871708 - 21871662
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  21871708 catcatcattcacaatatataatattctctcattaatcgtcaaagta 21871662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 21875988 - 21875942
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  21875988 catcatcattcacaatatataatattctctcattaatcgtcaaagta 21875942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 22959407 - 22959321
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||| |||| ||||| |||||||||||||||| ||||||||||||||  | |||||||||||||||| |||||||    
T  22959407 tcaactcacatcaacttgtgcaacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctc 22959321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 24767474 - 24767431
Alignment:
Q  11 acatcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  24767474 acatcatcatccacaatatataatattctctcattaatcatcaa 24767431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 21329369 - 21329311
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  21329369 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgta 21329311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 21741417 - 21741331
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| |||||| |||||||| |||||| |||| ||||  |||||||||| ||||||| |||||||    
T  21741417 tcaactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctc 21741331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 22144247 - 22144332
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| ||||||||||||||||| | |  | ||||||| |  ||||||||||||||  ||||||||||||||||| |||||||    
T  22144247 cttcacaggtcatcattaatatcataaacaatcttcattacgactccaaggttcaactctcaacaactcgtgcgacaaagatcgca 22144332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 21502015 - 21501942
Alignment:
Q  287 caactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||||||||||  ||||||||||||| |||||||||||||| |  ||| || ||||||||||| |||||||    
T  21502015 caactcgtgcgacaaatatcgcatttaacccaacaaggcattctg-aactgggtaactcgcgaggcgagagcctc 21501942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 21565791 - 21565877
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| |||||||||| || | |||||| |||||||||  | |||||||| ||||||| |||||||    
T  21565791 tcaactcacatcaactcgtgcgacaaagatcgcattttacataaacaagtcattctgtaactagttagctcacgaggcgagagcctc 21565877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 26011907 - 26011850
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | ||||||||| ||||| |||| ||||||||||||||| ||||||||||    
T  26011907 tcaactcacatcaactcgtgtgacaaagatcacatttaacctaacaaagcattctgta 26011850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 10753613 - 10753645
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  10753613 tacaaatgcacgtcatcaacatctcaatcatca 10753645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 21731350 - 21731299
Alignment:
Q  258 tcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||| ||| ||||||| ||||||||||||| || |||||||||||||||||    
T  21731350 tcattcctaccccaagggtcaactcataacatcttgtgcgacaaggatcgca 21731299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 21809470 - 21809419
Alignment:
Q  258 tcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||| ||| ||||||| ||||||||||||| || |||||||||||||||||    
T  21809470 tcattcctaccccaagggtcaactcataacatcttgtgcgacaaggatcgca 21809419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 19669146 - 19669232
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||| |||||||||| ||| |||||| ||||| ||||||||||||||  | ||||||| | |||||| |||||||    
T  19669146 tcaactcacatcaacttgtgcgacaagaatcacatttatcctaaacaaggcattctgtaactagttagctggtgaggcgagagcctc 19669232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 20572119 - 20572169
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||| | ||||||||||||| ||||||||||||||||||||    
T  20572119 cattcctaccccaaagatcaactcataacatctcgtgcgacaaggatcgca 20572169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 36154753 - 36154667
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| |||||||||||||  ||| |||    |||| |||| |||||||||||||||  ||| ||||||||||||| |||||||    
T  36154753 gcttcacatatcatcattaataatatatataatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgca 36154667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 43121356 - 43121434
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||||||| |||||||| ||||| || | ||| |||||| ||||||||| ||||| |||| |||  ||||||||||||    
T  43121356 gcttcacagttcatcatttatatcctatacatctctcattgctatcccaaagttcagctcacaacctctcgtgcgacaa 43121434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 43124889 - 43124967
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||||||| |||||||| ||||| || | ||| |||||| ||||||||| ||||| |||| |||  ||||||||||||    
T  43124889 gcttcacagttcatcatttatatcctatacatctctcattgctatcccaaagttcagctcacaacctctcgtgcgacaa 43124967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 11581169 - 11581084
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||| ||||||||||| ||| |||    |||| |||| |||||||||||||||  ||| |||||| |||||| |||||||    
T  11581169 cttcacagattatcattaatattatatataatattcataactaccccaaggttcaactctcaacgactcgtacgacaaagatcgca 11581084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 5889319 - 5889275
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  5889319 catctttcacaatatataaatattctcacattaatcatcaaagta 5889275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 9078182 - 9078285
Alignment:
Q  257 ctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcggga 356  Q
    |||| ||||| ||||||||||||| | |||||||| ||||||||  |||||||   | |||||||||||| ||||| | ||| |  ||||||||||| ||    
T  9078182 ctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgca-aaatcctaacaaggcactctgtttctgggtcactcgcgaggcgaga 9078280  T
Q  357 gcctc 361  Q
    |||||    
T  9078281 gcctc 9078285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 20026812 - 20026756
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | | ||||||||||||| | || ||||||| |||||||||||||||||    
T  20026812 tcaactcacatcgactcgtgcgacaacggtcacatttaagctaacaaggcattctgt 20026756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 21871597 - 21871565
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    ||||||||||||||||||||||||||| |||||    
T  21871597 tacaaatgcacgtcatcaacatctcaagcatca 21871565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 21875877 - 21875845
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    ||||||||||||||||||||||||||| |||||    
T  21875877 tacaaatgcacgtcatcaacatctcaagcatca 21875845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 22120221 - 22120189
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||| ||||||||||||||||||||||||    
T  22120221 tacaaatgaacgtcatcaacatctcaatcatca 22120189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 29915217 - 29915173
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  29915217 catctttcacaatatataaatattctcacattaatcatcaaagta 29915173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 24028937 - 24029047
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  24028937 cttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaa 24029036  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  24029037 ggcattctgta 24029047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 20157215 - 20157105
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  20157215 cttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaa 20157116  T
Q  323 ggcattctgta 333  Q
    |||| ||||||    
T  20157115 ggcactctgta 20157105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 225 - 333
Target Start/End: Complemental strand, 22634137 - 22634028
Alignment:
Q  225 ttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaag 323  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  22634137 ttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaaatcgtgcgacaaagatcgcatttaacctaaacaag 22634038  T
Q  324 gcattctgta 333  Q
    ||||||||||    
T  22634037 gcattctgta 22634028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 3332081 - 3332191
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||||    
T  3332081 cttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactaataacaactcatgcgacaaagatcgcatttaacctaaacaa 3332180  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  3332181 ggcattctgta 3332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 13812734 - 13812624
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  13812734 cttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaa 13812635  T
Q  323 ggcattctgta 333  Q
     ||||||||||    
T  13812634 agcattctgta 13812624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 332
Target Start/End: Original strand, 32851571 - 32851680
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||||||| ||| ||| |||| |||||| ||||||||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||| ||| |    
T  32851571 cttcacagatcgtcactaacatcaaacatattcctcattactatccccaggttcaactcataacaactcacgcgacaaagatcgcatttaacctaaacca 32851670  T
Q  323 ggcattctgt 332  Q
    ||||||||||    
T  32851671 ggcattctgt 32851680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 15190564 - 15190650
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| |||||| |||||||||| ||||||||||||||  |||||||||||||||||| |||||||    
T  15190564 tcaactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctc 15190650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 15868634 - 15868549
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||| ||| ||| |||||||||||  ||||||||||||||  ||||||||||||||||||||| ||||||| |||||||    
T  15868634 cttcacagatcgtcactaacatcatacatatttctcattactatccccgggttcaactcataacaactcgcgcgacaaagatcgca 15868549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 630911 - 630865
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  630911 catcatcattcacaatatataatattctctcattaatcatcaaagta 630865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 15868846 - 15868800
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15868846 catcatcattcacaatatataatattctctcattaatcatcaaagta 15868800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 8846619 - 8846707
Alignment:
Q  274 gttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||||| | ||||||||||||||| ||||||||||||| | |||||| |||||||||  | |||||||||||||||| |||||||    
T  8846619 gttcaactcacatcaactcgtgcgacaaagatcgcatttaacataaacaagacattctgtaactagttagctcgcgaggcgagagcctc 8846707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 15099597 - 15099683
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | |||||| |||||||| |||||| |||||||||| |||| |||||||||  |||||||||||||||||| |||||||    
T  15099597 tcaactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactggttagctcgcgaggcgagagcctc 15099683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 15464855 - 15464777
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    |||||||| |||||||||||||||||| | |   ||||||||||  ||||||||||||||||||||||| |||||||||    
T  15464855 gcttcacaaatcatcattaatatcatatacaattctcattactactccaaggttcaactcataacaacttgtgcgacaa 15464777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 14825666 - 14825750
Alignment:
Q  225 ttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| ||||| ||||||||||   | || ||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  14825666 ttcacagaacatcagtaatatcataatcaaccttcattcctaccccaaggatcaactcataacatctcgtgcgacaaggatcgca 14825750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 10313908 - 10313986
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    |||||||||||||||||| ||||| || | |||  ||||| ||||||||| |||||||||| ||| |||||||||||||    
T  10313908 gcttcacagatcatcatttatatcctatacatctttcattgctatcccaaagttcaactcaaaaccactcgtgcgacaa 10313986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 12774246 - 12774304
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  12774246 tcaactcacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggcagtctgta 12774304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 22634349 - 22634307
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  22634349 catcatcatccacaatatataatattctctcattaatcatcaa 22634307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 32851360 - 32851402
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  32851360 catcatcattcacaatatgtaatattctctcattaatcatcaa 32851402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 44102406 - 44102492
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||| ||| |||    |||| ||||||||||||||||||||  ||| |||||||| |||| |||||||    
T  44102406 gcttcacagatcatcattaatattatatataatattcataactatcccaaggttcaactctcaacgactcgtgctacaaagatcgca 44102492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 52243118 - 52243032
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||||||||||| || | |  | ||||||||| ||||| ||||||||| | || ||||||||||||| |||||||    
T  52243118 gcttcacagatcatcattaatatcttatacaatcttcattactaccccaaagttcaactctttacgactcgtgcgacaaagatcgca 52243032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 13812946 - 13812900
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    |||||| || ||||||||||||||||||||||||||||||| |||||    
T  13812946 catcataatccacaatatataatattctctcattaatcatctaagta 13812900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 39706161 - 39706103
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  39706161 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgta 39706103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 44928848 - 44928762
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||| ||| |||    |||| |||| | |||||||||||||  ||| ||||||||||||| |||||||    
T  44928848 gcttcacagatcatcattaatattatatataatattcataactaccacaaggttcaactctcaacgactcgtgcgacaaagatcgca 44928762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 630800 - 630768
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  630800 tacaaatgcacgtcatcaacatctcaatcatca 630768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 13812835 - 13812803
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  13812835 tacaaatgcacgtcatcaacatctcaatcatca 13812803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 14953987 - 14953955
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  14953987 tacaaatgcacgtcatcaacatctcaatcatca 14953955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 14954031 - 14953999
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  14954031 tacaaatgcacgtcatcaacatctcaatcatca 14953999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 14954133 - 14954101
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    |||||||||||||||||||||||||||||||||    
T  14954133 attcacaatatataatattctctcattaatcat 14954101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 15225133 - 15225165
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  15225133 tacaaatgcacgtcatcaacatctcaatcatca 15225165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 25690112 - 25690144
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  25690112 tacaaatgcacgtcatcaacatctcaatcatca 25690144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 25690156 - 25690188
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  25690156 tacaaatgcacgtcatcaacatctcaatcatca 25690188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 32851469 - 32851501
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  32851469 tacaaatgcacgtcatcaacatctcaatcatca 32851501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 46640328 - 46640272
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | ||||||||||||||| | || ||||||||||||||||| |||||||    
T  46640328 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtattctgt 46640272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 10713102 - 10713132
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  10713102 tacaaatgcacgtcatcaacatctcaatcat 10713132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 10926872 - 10926902
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  10926872 tacaaatgcacgtcatcaacatctcaatcat 10926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 12487960 - 12487990
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  12487960 tacaaatgcacgtcatcaacatctcaatcat 12487990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 13591815 - 13591765
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  13591815 cattcctaccccaaggatcaactaataacatctcgtgcgacaaggatcgca 13591765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 361
Target Start/End: Original strand, 14038844 - 14038981
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaa 322  Q
    ||||||||||| || |||||||||||   ||   |||| ||||| ||||||||||||||| || ||||| ||||||||  |||||||   | ||||||||    
T  14038844 gcttcacagattataattaatatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacagatcgca-aaatcctaacaa 14038942  T
Q  323 ggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||| ||||| | ||| |  ||||||||||| |||||||    
T  14038943 ggcactctgtttctgggtcactcgcgaggcgagagcctc 14038981  T

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Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 17333512 - 17333562
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  17333512 cattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 17333562  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 31116979 - 31116901
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||||||| |||||||| ||||| || | ||| |||||| ||||||||| ||||| |||| |||  ||||||||||||    
T  31116979 gcttcacagttcatcatttatatcctatacatctctcattgctatcccaaagttcagctcacaacctctcgtgcgacaa 31116901  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 323
Target Start/End: Complemental strand, 43198426 - 43198380
Alignment:
Q  277 caactcataacaactcgtgcgacaaggatcgcatttaacctaacaag 323  Q
    ||||||| | ||||||||| ||||| |||||||||||||||||||||    
T  43198426 caactcacatcaactcgtgtgacaaagatcgcatttaacctaacaag 43198380  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 55502674 - 55502596
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||||||| |||||||| ||||| || | ||| |||||| ||||||||| ||||| |||| |||  ||||||||||||    
T  55502674 gcttcacagttcatcatttatatcctatacatctctcattgctatcccaaagttcagctcacaacctctcgtgcgacaa 55502596  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 15868735 - 15868706
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatca 152  Q
    ||||||||||||||||||||||||||||||    
T  15868735 tacaaatgcacgtcatcaacatctcaatca 15868706  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 16223728 - 16223797
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactc 292  Q
    |||||||||||||||||||||||| || |||    |||| |||| |||||||||||||||  ||||||||    
T  16223728 gcttcacagatcatcattaatatcgtaaataatattcataactaccccaaggttcaactctcaacaactc 16223797  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 23803154 - 23803089
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataaca 288  Q
    |||||||||||||||| |||||| |||   | |||||||| ||| ||||||| |||||||||||||    
T  23803154 gcttcacagatcatcagtaatattatattcaaccctcattcctaccccaaggatcaactcataaca 23803089  T

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Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 43251253 - 43251188
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataaca 288  Q
    ||||||||||||||||||||||||||| | | |  |||||  |||||||| |||||||||| ||||    
T  43251253 gcttcacagatcatcattaatatcatatacaactttcattgttatcccaaagttcaactcacaaca 43251188  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 56115526 - 56115461
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataaca 288  Q
    ||||||||||||||| |||||||| || | | |  ||||| |||||||||||||||||||| ||||    
T  56115526 gcttcacagatcatccttaatatcctatacaactttcattgctatcccaaggttcaactcacaaca 56115461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 3331980 - 3332012
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||| ||||||||||||||||||||||    
T  3331980 tacaaatgcatgtcatcaacatctcaatcatca 3332012  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10712993 - 10713025
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  10712993 attcacagtatataatattctctcattaatcat 10713025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10926763 - 10926795
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  10926763 attcacagtatataatattctctcattaatcat 10926795  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 12487851 - 12487883
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  12487851 attcacagtatataatattctctcattaatcat 12487883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 15225327 - 15225359
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||| ||||||||    
T  15225327 tacaaatgcacgtcatcaacatcttaatcatca 15225359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 16043253 - 16043309
Alignment:
Q  268 cccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaagg 324  Q
    ||||||| ||||||||  |||||||||||||||| ||||||||  | ||||||||||    
T  16043253 cccaaggatcaactcaccacaactcgtgcgacaaagatcgcatgaaccctaacaagg 16043309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 20157316 - 20157284
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||| ||||||||||    
T  20157316 tacaaatgcacgtcatcaacatttcaatcatca 20157284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 22634239 - 22634207
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||| ||||||||||    
T  22634239 tacaaatgcacgtcatcaacatttcaatcatca 22634207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 25690010 - 25690042
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  25690010 attcacagtatataatattctctcattaatcat 25690042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 52873301 - 52873257
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  52873301 catctttcacaatatataaatattctcacattaatcatcaaagta 52873257  T

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Target: scaffold0192 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 10106 - 10216
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  10106 cttcacagatcaccattaatatcatacatattcctcattactatcccaaggttcaactcataacaactcgtacgacaaagatcgcatttaacctaaacaa 10205  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  10206 ggcattctgta 10216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 9850 - 9889
Alignment:
Q  19 attcacaatatataatattctctcattaatcatcaaagta 58  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9850 attcacaatatataatattctctcattaatcatcaaagta 9889  T

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Target: scaffold0075 (Bit Score: 84; Significance: 7e-40; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 227 - 333
Target Start/End: Complemental strand, 8216 - 8109
Alignment:
Q  227 cacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggc 325  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| ||||||||    
T  8216 cacagatcatcattaatatcatacatattcctcattactatcccaaggttcaacccatatcaactcgtgcgacaaagatcgcatttaacctaaacaaggc 8117  T
Q  326 attctgta 333  Q
    ||||||||    
T  8116 attctgta 8109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 8431 - 8385
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  8431 catcatcattcacaatatataatattctctcattaatcatcaaagta 8385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 8320 - 8288
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  8320 tacaaatgcacgtcatcaacatctcaatcatca 8288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 9759 - 9649
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  9759 cttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaa 9660  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  9659 ggcattctgta 9649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 9971 - 9928
Alignment:
Q  11 acatcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  9971 acatcatcatccacaatatataatattctctcattaatcatcaa 9928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 2832230 - 2832120
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  2832230 cttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcacatttaacctaaacaa 2832131  T
Q  323 ggcattctgta 333  Q
    | |||||||||    
T  2832130 gacattctgta 2832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 9751475 - 9751365
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||    
T  9751475 cttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcgcatttaaactaaacaa 9751376  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  9751375 ggcattctgta 9751365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 39267571 - 39267461
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  39267571 cttcacagatcatcattaatatcatatatattcctcattactatcacaaggttcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaa 39267472  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  39267471 ggcattctgta 39267461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 18302374 - 18302484
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || | |||||||||||||||||||| ||||     
T  18302374 cttcacagatcgtcattaatatcatacatattcctcattactatcccaaggttcaactcataacaatttgtactacaaggatcgcatttaacctaaacat 18302473  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  18302474 ggcattctgta 18302484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 333
Target Start/End: Complemental strand, 2529978 - 2529868
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-ca 321  Q
    |||||||||||||||| |||||| ||| |||| | ||||| |||||| |||  |||||||||||||||||||||||||| |||||||||||||||||  |    
T  2529978 gcttcacagatcatcagtaatattatatatattcttcatt-ctatccaaagactcaactcataacaactcgtgcgacaaagatcgcatttaacctaatta 2529880  T
Q  322 aggcattctgta 333  Q
    ||||||||||||    
T  2529879 aggcattctgta 2529868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 67993 - 68079
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||    
T  67993 tcaactcacatcaacttgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctc 68079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 16056576 - 16056661
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | |||||||||| |||| |||||||||||||||||||||||||||||||  ||| || ||||||||||| |||||||    
T  16056576 tcaactcacatcaactcgtgctacaaagatcgcatttaacctaacaaggcattctgtaactgggtaactcgcgaggcgagagcctc 16056661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 22073164 - 22073241
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcg 353  Q
    |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||  ||| || |||||||||||    
T  22073164 tcaactcacatcaactcgtgcgacaaggatcgcatttaacctaacaaagcattctgtaactgggtaactcgcgaggcg 22073241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 14036394 - 14036480
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||||||| | | ||  |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  14036394 gcttcacagatcatcattaatatcatatacaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 14036480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 14346424 - 14346510
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||||||| | | ||  |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  14346424 gcttcacagatcatcattaatatcatatacaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 14346510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 44014421 - 44014507
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||| ||||||||||| ||||||||||||||| ||||||||||||||||   ||||||||||||||||| |||||||    
T  44014421 tcaactcacatcaattcgtgcgacaatgatcgcatttaacctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctc 44014507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 2280043 - 2279957
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||||| |||||||| |||  | ||||||| | |||||||||||||||  ||||||||||| ||||| |||||||    
T  2280043 gcttcacagatcatcattgatatcataaataatcttcattacgaccccaaggttcaactctcaacaactcgtgtgacaaagatcgca 2279957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 9389569 - 9389483
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||| ||||| |||||| |||||||||| ||||||||||||||  || ||||||||||||||| |||||||    
T  9389569 tcaactcacatcaactcgtgtgacaaagatcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctc 9389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 14044944 - 14045030
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||||||| |||||| | | ||  |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  14044944 gcttcacagatcatcattaacatcatatacaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 14045030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 14354974 - 14355060
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||||||| |||||| | | ||  |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  14354974 gcttcacagatcatcattaacatcatatacaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 14355060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 16324254 - 16324311
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  16324254 tcaactcacatcaactcatgcgacaaggatcacatttaacctaacaaggcattctgta 16324311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 35366421 - 35366498
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||||||||||||||||||||| || | |||  ||||| ||||||||| |||||||||| ||| |||||||||||||    
T  35366421 cttcacagatcatcattaatatcctatacatctttcattgctatcccaaagttcaactcacaaccactcgtgcgacaa 35366498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 9751683 - 9751641
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  9751683 catcatcatccacaatatataatattctctcattaatcatcaa 9751641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 16091953 - 16092039
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| |||||||||||||| ||| | | ||  |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  16091953 gcttcacatatcatcattaatattatatacaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 16092039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 16219578 - 16219532
Alignment:
Q  287 caactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  16219578 caacttgtgcgacaaagatcgcatttaacctaacaaggcattctgta 16219532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 15116729 - 15116785
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||||||||||    
T  15116729 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgt 15116785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 38227715 - 38227813
Alignment:
Q  262 tactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    ||||| ||||||||||||||| ||||||||||||| |||| | |||||   |||||||||||||| ||||| | ||| |  ||||||||||| |||||||    
T  38227715 tactaccccaaggttcaactcttaacaactcgtgcaacaaaggtcgca-aaaacctaacaaggcactctgtttatgggtcactcgcgaggcgagagcctc 38227813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 9177590 - 9177504
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| |||||||||||||| ||| | | ||  |||| ||| ||||| | ||||||||||||| |||||||||||| |||||||    
T  9177590 gcttcacatatcatcattaatattatatacaacctccattcctaccccaaagatcaactcataacatctcgtgcgacaaagatcgca 9177504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 15008423 - 15008337
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||| ||||||||||||||| | | ||  ||||  ||  | |||||||||||||||||| |||||||||||| |||||||    
T  15008423 gcttcacagattatcattaatatcatatacaacctccattcatactcgaaggttcaactcataacatctcgtgcgacaaagatcgca 15008337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 15754761 - 15754703
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  15754761 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgta 15754703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 18302142 - 18302188
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||    
T  18302142 catcttcatccacaatatataatattctctcaataatcatcaaagta 18302188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 39267827 - 39267781
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    |||||| || ||||||||||||||||||||||||||||||| |||||    
T  39267827 catcataatccacaatatataatattctctcattaatcatctaagta 39267781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 15113192 - 15113248
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||||| ||||    
T  15113192 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcatcctgt 15113248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 18425687 - 18425719
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  18425687 tacaaatgcacgtcatcaacatctcaatcatca 18425719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 18425889 - 18425921
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  18425889 tacaaatgcacgtcatcaacatctcaatcatca 18425921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 39267672 - 39267640
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  39267672 tacaaatgcacgtcatcaacatctcaatcatca 39267640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 39267716 - 39267684
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  39267716 tacaaatgcacgtcatcaacatctcaatcatca 39267684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 11995900 - 11995845
Alignment:
Q  278 aactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||| | |||||||  |||||| ||||||||||||||||| |||||||||||||    
T  11995900 aactcacatcaactcgaacgacaaagatcgcatttaacctaaaaaggcattctgta 11995845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 294
Target Start/End: Complemental strand, 38898346 - 38898275
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgt 294  Q
    ||||| ||||||||||||||||| ||| |||    |||| |||||||||||| |||||||| ||||||||||    
T  38898346 gcttcgcagatcatcattaatattataaataatattcataactatcccaaggatcaactcacaacaactcgt 38898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 124118 - 124040
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||||||| |||||||| ||||| || | ||| |||||| ||||||||| ||||| |||| |||  ||||||||||||    
T  124118 gcttcacagttcatcatttatatcctatacatctctcattgctatcccaaagttcagctcacaacctctcgtgcgacaa 124040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 9033234 - 9033184
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  9033234 cattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgca 9033184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 9725548 - 9725498
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  9725548 cattcctaccccaaggatcaactaataacatctcgtgcgacaaggatcgca 9725498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 45169863 - 45169833
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  45169863 tacaaatgcacgtcatcaacatctcaatcat 45169833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 13892832 - 13892873
Alignment:
Q  268 cccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||| ||||||||||||| |||||||||||| |||||||    
T  13892832 cccaaggatcaactcataacatctcgtgcgacaaagatcgca 13892873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 28505173 - 28505116
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | |||||||  |||||| ||||||||| ||||||| |||||||||||||    
T  28505173 tcaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaaggcattctgta 28505116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 9751576 - 9751544
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||| ||||||||||    
T  9751576 tacaaatgcacgtcatcaacatttcaatcatca 9751544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 14270188 - 14270144
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  14270188 catctttcacaatatataaatattctcacattaatcatcaaagta 14270144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 17232598 - 17232642
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  17232598 catctttcacaatatataaatattctcacattaatcatcaaagta 17232642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 18302253 - 18302285
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||| ||||||    
T  18302253 tacaaatgcacgtcatcaacatctcattcatca 18302285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 18426089 - 18426121
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||| ||||||||    
T  18426089 tacaaatgcacgtcatcaacatcttaatcatca 18426121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 45169972 - 45169940
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  45169972 attcacagtatataatattctctcattaatcat 45169940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 45847784 - 45847740
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  45847784 catctttcacaatatataaatattctcacattaatcatcaaagta 45847740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 14665801 - 14665911
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  14665801 cttcacaaatcatcattaatatcatatatattcctcattactatcacaaggttcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaa 14665900  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  14665901 ggcattctgta 14665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 14668956 - 14669066
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||    
T  14668956 cttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcgaatttaacctaaacaa 14669055  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  14669056 ggcattctgta 14669066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 14735314 - 14735424
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  14735314 cttcacaaatcatcattaatatcatatatattcctcattactatcacaaggttcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaa 14735413  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  14735414 ggcattctgta 14735424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 4588713 - 4588603
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  4588713 cttcacaaatcatcattaatatcatgtatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagctcgcatttaacctaaacaa 4588614  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  4588613 ggcattctgta 4588603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 12852289 - 12852179
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| ||||     
T  12852289 cttcacagatcgtcattaatatcatacatattcctcattactatcccaaggttaaactcataacaactcgtactacaaggatcgcatttaacctaaacat 12852190  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  12852189 ggcattctgta 12852179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 45797363 - 45797458
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaa 319  Q
    ||||||||||| ||| ||| |||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  45797363 cttcacagatcgtcactaacatcaaacatattcctcattactatccccaggttcaactcataacaactcgcgcgacaaagatcgcatttaacctaa 45797458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 14501319 - 14501414
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaa 319  Q
    ||||||||||| ||| ||| |||| |||||| ||||||||||||||| |||||||||||||||||||||| | ||||| |||||||||||||||||    
T  14501319 cttcacagatcgtcactaacatcaaacatattcctcattactatccccaggttcaactcataacaactcgcgtgacaaagatcgcatttaacctaa 14501414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 332
Target Start/End: Complemental strand, 23413174 - 23413065
Alignment:
Q  225 ttcacagatcatcattaatatcatacatatccctcattact-atcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    |||| ||||||||||||||||| |||||||  ||||||||| |||| |||||||||||||||||||||  | ||| || ||||||| ||||||| |||||    
T  23413174 ttcatagatcatcattaatatcctacatatttctcattacttatccaaaggttcaactcataacaacttatccgataaagatcgcaattaacctaaacaa 23413075  T
Q  323 ggcattctgt 332  Q
    ||||||||||    
T  23413074 ggcattctgt 23413065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 1465283 - 1465197
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| |||  | |||||||||| ||||||||||||||  |||||||||||||||||| |||||||    
T  1465283 tcaactcacatcaactcgtgcgacaaagattacttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctc 1465197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 12171978 - 12171892
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||| |||||||||| |||||||||||||| ||||||||||||||||  | ||||| |||||||||| |||||||    
T  12171978 tcaactcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagatcgcgaggcgagagcctc 12171892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 12852505 - 12852459
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  12852505 catcatcatccacaatatataatattctctcaataatcatcaaagta 12852459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 14668746 - 14668788
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  14668746 catcatcatccacaatatataatattctctcattaatcatcaa 14668788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 16097577 - 16097663
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| ||||||||||||| | |||||| |||| ||||  | |||||||||||||||| |||||||    
T  16097577 tcaactcacatcaactcgtgcgacaaagatcgcatttaacataaacaagacattttgtaactagttagctcgcgaggcgagagcctc 16097663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 23274884 - 23274970
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||| |||  ||    |||| |||||||||||| |||||||  ||||||||||||||||| |||||||    
T  23274884 gcttcacagatcatcattaatattataattaatattcataactatcccaaggctcaactctcaacaactcgtgcgacaaagatcgca 23274970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 23413386 - 23413344
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  23413386 catcatcattcacaatatgtaatattctctcattaatcatcaa 23413344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 45797152 - 45797194
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  45797152 catcatcattcacaatatgtaatattctctcattaatcatcaa 45797194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 12339986 - 12340058
Alignment:
Q  262 tactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    ||||| || ||||||||||||  ||||||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  12339986 tactacccaaaggttcaactctcaacaactcgtgcgacaaagatcacatttaacctaaacaaggcattatgta 12340058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 13210201 - 13210143
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  13210201 tcaactcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgta 13210143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 14665590 - 14665632
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    |||| |||| |||||||||||||||||||||||||||||||||    
T  14665590 catcgtcatccacaatatataatattctctcattaatcatcaa 14665632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 32307916 - 32307974
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  32307916 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgta 32307974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 42386607 - 42386685
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||||||||| |||||||| |||||| | |   | || ||||| |||||||||||||||| |||||||||||||||||    
T  42386607 gcttcacagattatcattaacatcataaacaagtcccaatactaccccaaggttcaactcacaacaactcgtgcgacaa 42386685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 332
Target Start/End: Original strand, 17672818 - 17672927
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaa 322  Q
    |||||||||||| |||||||||| ||| |||    |||| |||||| ||||| |||||||| ||| ||||||||||| | | || | |||||||||||||    
T  17672818 gcttcacagatcttcattaatattatatataatattcataactatctcaaggatcaactcacaacgactcgtgcgacgaaggtcacttttaacctaacaa 17672917  T
Q  323 ggcattctgt 332  Q
    |  |||||||    
T  17672918 gatattctgt 17672927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 12852394 - 12852362
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  12852394 tacaaatgcacgtcatcaacatctcaatcatca 12852362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 14501217 - 14501249
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  14501217 tacaaatgcacgtcatcaacatctcaatcatca 14501249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 16750049 - 16750017
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  16750049 tacaaatgcacgtcatcaacatctcaatcatca 16750017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 16750445 - 16750413
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  16750445 tacaaatgcacgtcatcaacatctcaatcatca 16750413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 19776017 - 19776049
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  19776017 tacaaatgcacgtcatcaacatctcaatcatca 19776049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 37439493 - 37439461
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  37439493 tacaaatgcacgtcatcaacatctcaatcatca 37439461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 45797261 - 45797293
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  45797261 tacaaatgcacgtcatcaacatctcaatcatca 45797293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 319
Target Start/End: Complemental strand, 49389491 - 49389459
Alignment:
Q  287 caactcgtgcgacaaggatcgcatttaacctaa 319  Q
    |||||||||||||||||||||||||||||||||    
T  49389491 caactcgtgcgacaaggatcgcatttaacctaa 49389459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 603565 - 603486
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaag 302  Q
    |||||||| ||||||||| ||||| || | |||  ||||  ||||||||| |||||||||| ||| ||||||||||||||    
T  603565 gcttcacatatcatcatttatatcctatacatctttcatcgctatcccaaagttcaactcacaaccactcgtgcgacaag 603486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 1644556 - 1644517
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaac 315  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  1644556 tcaactcacatcaactcgtgcgacaaggatcgcatttaac 1644517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 12934184 - 12934141
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa 319  Q
    |||||||| | ||||||||||||||| |||||||||||||||||    
T  12934184 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaa 12934141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 353
Target Start/End: Original strand, 14234749 - 14234816
Alignment:
Q  287 caactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcg 353  Q
    ||||| || |||||| |||| |||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  14234749 caacttgttcgacaaagatcacatttaacctaaacaaggcattctgtaactggttagcttgcgaggcg 14234816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 15471183 - 15471230
Alignment:
Q  287 caactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  15471183 caactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgta 15471230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 18439994 - 18439947
Alignment:
Q  12 catcatcattcacaatatata-atattctctcattaatcatcaaagta 58  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  18439994 catcatctttcacaatatatagatattctcacattaatcatcaaagta 18439947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 37427945 - 37427996
Alignment:
Q  258 tcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||| ||| ||||||| ||||||||||||| ||||||||||||| ||||||    
T  37427945 tcattcctaccccaaggatcaactcataacatctcgtgcgacaagaatcgca 37427996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 54046908 - 54046987
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaag 302  Q
    |||||||| ||||||||| ||||| || | |||  ||||  ||||||||| |||||||||| ||| ||||||||||||||    
T  54046908 gcttcacatatcatcatttatatcctatacatctttcatcgctatcccaaagttcaactcacaaccactcgtgcgacaag 54046987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 324466 - 324568
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagc 358  Q
    |||| ||| ||||||| |||||||| | ||||| || |||||| | || |||||||||||||||||  |||||||  | | || ||||||||||| ||||    
T  324466 cattcctaccccaaggatcaactcacatcaacttgtacgacaaaggtcacatttaacctaacaaggtgttctgtaacttggtaactcgcgaggcgagagc 324565  T
Q  359 ctc 361  Q
    |||    
T  324566 ctc 324568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 2051124 - 2051038
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| |||||||||||||||||| | |  | ||||||| | | ||| |||||||||  |||||||| |||||||| |||||||    
T  2051124 gcttcacaaatcatcattaatatcataaacaatcttcattacgacctcaatgttcaactctcaacaactcatgcgacaaagatcgca 2051038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 4107254 - 4107224
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  4107254 tacaaatgcacgtcatcaacatctcaatcat 4107224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 4111106 - 4111076
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  4111106 tacaaatgcacgtcatcaacatctcaatcat 4111076  T

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Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 12378118 - 12378204
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||||||||||  ||  || ||  |||| ||| || |||| |||||||| |||| |||||||||||| |||||||    
T  12378118 gcttcacagatcatcattaatattgtatttaacctccattgctaccctaaggatcaactcaaaacatctcgtgcgacaaagatcgca 12378204  T

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Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 14501108 - 14501150
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    ||||||||||||| | || ||||||||||||||||||||||||    
T  14501108 catcatcattcacgaaatgtaatattctctcattaatcatcaa 14501150  T

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Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 15965221 - 15965251
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  15965221 tacaaatgcacgtcatcaacatctcaatcat 15965251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 15969145 - 15969175
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  15969145 tacaaatgcacgtcatcaacatctcaatcat 15969175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 15973069 - 15973099
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  15973069 tacaaatgcacgtcatcaacatctcaatcat 15973099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 49667957 - 49667899
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||| ||||||||| ||||||||| ||||||    
T  49667957 tcaactcacatcaactcgtgcgacaaagatcgtatttaacctaaacaaggcagtctgta 49667899  T

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Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 52523652 - 52523566
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||| |||||||||||||||||| || | |  | ||||||||| ||||| |||||||||  ||  ||||||||||||| |||||||    
T  52523652 gcttctcagatcatcattaatatcttatacaatcttcattactaccccaaagttcaactctcaatgactcgtgcgacaaagatcgca 52523566  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 37251039 - 37250954
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| | || | |||||||||||||||  |||||||  |||  | ||||||||||| |||||||    
T  37251039 tcaactcacatcaactcgtgcgacaaaggtcacttttaacctaacaaggtgttctgtaactgggcaactcgcgaggcgagagcctc 37250954  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 316357 - 316401
Alignment:
Q  265 tatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| | ||||||||||||| |||||||||||| |||||||    
T  316357 tatcccaatgatcaactcataacatctcgtgcgacaaagatcgca 316401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4107363 - 4107331
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  4107363 attcacagtatataatattctctcattaatcat 4107331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 4111215 - 4111183
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  4111215 attcacagtatataatattctctcattaatcat 4111183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 4588816 - 4588784
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||| ||||||||||    
T  4588816 tacaaatgcacgtcatcaacatttcaatcatca 4588784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 8489322 - 8489290
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    ||||||| |||||||||||||||||||||||||    
T  8489322 tacaaatacacgtcatcaacatctcaatcatca 8489290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 15965112 - 15965144
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  15965112 attcacagtatataatattctctcattaatcat 15965144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 15969036 - 15969068
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  15969036 attcacagtatataatattctctcattaatcat 15969068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 15972960 - 15972992
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  15972960 attcacagtatataatattctctcattaatcat 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 16104030 - 16104086
Alignment:
Q  278 aactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||| | ||||||||||||||| || |||||||||||| ||||||||| ||||||    
T  16104030 aactcacatcaactcgtgcgacaaagagcgcatttaacctaaacaaggcagtctgta 16104086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 16749851 - 16749819
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||| ||||||||    
T  16749851 tacaaatgcacgtcatcaacatcttaatcatca 16749819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 16750247 - 16750215
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||| ||||||||    
T  16750247 tacaaatgcacgtcatcaacatcttaatcatca 16750215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 23413276 - 23413244
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||| ||||||||||||||||||||||||||||    
T  23413276 tacacatgcacgtcatcaacatctcaatcatca 23413244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 37439602 - 37439570
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  37439602 attcacagtatataatattctctcattaatcat 37439570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 43927382 - 43927438
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | ||||||||||||||| | || |||||| |||||||||| |||||||    
T  43927382 tcaactcacatcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgt 43927438  T

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Target: scaffold0221 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 12733 - 12624
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaag 323  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  |     
T  12733 cttcacagatcatcattaatatcatatatattcctcattactatcctaaggttcaactcataacaactcgtgcgacaagaatcgcatttaacctaaacaa 12634  T
Q  324 gcattctgta 333  Q
    ||||||||||    
T  12633 gcattctgta 12624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 12834 - 12802
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||| ||||||||||    
T  12834 tacaaatgcacgtcatcaacatttcaatcatca 12802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 24576 - 24481
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaa 319  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  24576 cttcacagatcgtcattaatatcatacatattcctcattactatcccaaggttcaactcataacaactcgtactacaaggatcgcatttaacctaa 24481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 24791 - 24745
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  24791 catcatcatccacaatatataatattctctcaataatcatcaaagta 24745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 24680 - 24648
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  24680 tacaaatgcacgtcatcaacatctcaatcatca 24648  T

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Target: scaffold0037 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 80257 - 80147
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  80257 cttcacaaatcatcattaatatcatgtatattcctcattactatcccaaggttcaactcataacaactcgtgcgacgaagatcgcatttaacctaaacaa 80158  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  80157 ggcattctgta 80147  T

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Target: scaffold0016 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 207444 - 207349
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaa 319  Q
    ||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  207444 cttcacaaatcatcattaatatcatgtatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcgcatttaacctaa 207349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 207545 - 207513
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||| ||||||||||    
T  207545 tacaaatgcacgtcatcaacatttcaatcatca 207513  T

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Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 27325359 - 27325249
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaa 322  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| | |||||    
T  27325359 cttcacagatcatcattaatatcttatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagattgtatttaacataaacaa 27325260  T
Q  323 ggcattctgta 333  Q
    |||||||||||    
T  27325259 ggcattctgta 27325249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 21939578 - 21939689
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctca-ttactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aaca 321  Q
    ||||||| |||||||||||||||||| |||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  21939578 cttcacaaatcatcattaatatcatatatattcctcaattactaacccaaggttcaactcataacaactcgtgcgacaaggatcacatttaacctaaaca 21939677  T
Q  322 aggcattctgta 333  Q
    || |||||||||    
T  21939678 agacattctgta 21939689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 4668086 - 4668001
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||| |||||||    
T  4668086 tcaactcacaacaactcgtgcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctc 4668001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 4674933 - 4674848
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||| |||||||    
T  4674933 tcaactcacaacaactcgtgcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctc 4674848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 4189204 - 4189289
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||  ||| |||||||||||||| |||||||    
T  4189204 tcaactcacaacaactcgtgcgacaacgatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctc 4189289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 4185696 - 4185611
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||  ||| |||||||||||||| |||||||    
T  4185696 tcaactcacaacaactcgtgcggcaaggatcgcatttaacctagcaaggcattctataaatgggtagctcgcgaggcgagagcctc 4185611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 27333157 - 27333072
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | |||||||||||||||||||| ||||||||||||||| |||||||||| ||||  || |||||||||| |||||||    
T  27333157 tcaactcacatcaactcgtgcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctc 27333072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 27393897 - 27393812
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | |||||||||||||||||||| ||||||||||||||| |||||||||| ||||  || |||||||||| |||||||    
T  27393897 tcaactcacatcaactcgtgcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctc 27393812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 31155267 - 31155186
Alignment:
Q  280 ctcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||  ||||   || |||||||||||||| |||||||    
T  31155267 ctcacaacaactcgtgcgacaaggaccgcatttaacctaacaaggcatgttgtaaaggggtagctcgcgaggcgagagcctc 31155186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 25644518 - 25644604
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||||||| |||  | | || |||| |||||||||||||||  | ||||||||||||||| |||||||    
T  25644518 gcttcacagatcatcattaatatcatatataatctttataactaccccaaggttcaactctcagcaactcgtgcgacaaagatcgca 25644604  T

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Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 19668621 - 19668706
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||  ||||||| ||||  ||||||||||||| |||||||    
T  19668621 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtaattggacagctcgcgaggcgagagcctc 19668706  T

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Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 1561550 - 1561608
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  1561550 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgta 1561608  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 18456911 - 18456997
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||| ||| |||    |||| |||  |||||||||||||||  ||| ||||||||||||| |||||||    
T  18456911 gcttcacagatcatcattaatattatatataatattcataactgccccaaggttcaactctcaacgactcgtgcgacaaagatcgca 18456997  T

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Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 18696683 - 18696769
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||| |||||| |||   | ||  |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  18696683 gcttcacagatcatcagtaatattatattcaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 18696769  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 19652442 - 19652528
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| ||||||||||| ||| ||||||| ||| ||||  | |||||| ||||||||| |||||||    
T  19652442 tcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaaggtattttgtaactagttagcccgcgaggcgagagcctc 19652528  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 16624381 - 16624413
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  16624381 tacaaatgcacgtcatcaacatctcaatcatca 16624413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 22949350 - 22949382
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  22949350 tacaaatgcacgtcatcaacatctcaatcatca 22949382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 22949394 - 22949426
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  22949394 tacaaatgcacgtcatcaacatctcaatcatca 22949426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 22953306 - 22953338
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  22953306 tacaaatgcacgtcatcaacatctcaatcatca 22953338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 22953350 - 22953382
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  22953350 tacaaatgcacgtcatcaacatctcaatcatca 22953382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 23019655 - 23019731
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggc 352  Q
    |||||||| | |||||||| |||||| |||||||||||||||||| | ||||| |||| ||||  | ||||||||||    
T  23019655 tcaactcacatcaactcgttcgacaaagatcgcatttaacctaaccaagcattttgtaattggacaactcgcgaggc 23019731  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 23871794 - 23871826
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  23871794 tacaaatgcacgtcatcaacatctcaatcatca 23871826  T

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Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 23871838 - 23871870
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  23871838 tacaaatgcacgtcatcaacatctcaatcatca 23871870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 23875750 - 23875782
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  23875750 tacaaatgcacgtcatcaacatctcaatcatca 23875782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 23875794 - 23875826
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  23875794 tacaaatgcacgtcatcaacatctcaatcatca 23875826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 27325460 - 27325428
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  27325460 tacaaatgcacgtcatcaacatctcaatcatca 27325428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 31477667 - 31477635
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  31477667 tacaaatgcacgtcatcaacatctcaatcatca 31477635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 16493378 - 16493429
Alignment:
Q  258 tcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||| ||| ||||||| ||||||||||||| || |||||||||||||||||    
T  16493378 tcattcctaccccaagggtcaactcataacatcttgtgcgacaaggatcgca 16493429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 16760544 - 16760574
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  16760544 tacaaatgcacgtcatcaacatctcaatcat 16760574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 16812971 - 16813049
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||| |||||||||||| ||||| || | |||  |||||  |||||||| |||||||||| ||| |||||||||||||    
T  16812971 gcttctcagatcatcatttatatcctatacatctttcattgttatcccaaagttcaactcacaaccactcgtgcgacaa 16813049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 16829991 - 16830069
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||| |||||||||||| ||||| || | |||  |||||  |||||||| |||||||||| ||| |||||||||||||    
T  16829991 gcttctcagatcatcatttatatcctatacatctttcattgttatcccaaagttcaactcacaaccactcgtgcgacaa 16830069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 20078063 - 20078013
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  20078063 cattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 20078013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 20224175 - 20224225
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  20224175 cattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 20224225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 22118159 - 22118209
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  22118159 cattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 22118209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 28496346 - 28496289
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  28496346 tcaactcacatcaactcgtgcgacaaagatcgcatt-aacctaaacaaggcattctgta 28496289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 29808757 - 29808700
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  29808757 tcaactcacatcaactcgtgcgacaaagatcgcatt-aacctaaacaaggcattctgta 29808700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 33443241 - 33443327
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||| |||||| |||   | ||  |||| ||| || |||| ||||||||||||| |||||||||||| |||||||    
T  33443241 gcttcacagatcatcaataatattatattcaacctccattcctaccctaaggatcaactcataacatctcgtgcgacaaagatcgca 33443327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 15539472 - 15539533
Alignment:
Q  223 gcttcacagatcatca-ttaatatcatacatatccctcattactatcccaaggttcaactca 283  Q
    |||||||||||||||| |||||||| || | | || ||||| ||||||||||||||||||||    
T  15539472 gcttcacagatcatcaattaatatcctatacaaccttcattgctatcccaaggttcaactca 15539533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 16624272 - 16624304
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||||||||||||||| |||||||||||||    
T  16624272 attcacaatatataatattttctcattaatcat 16624304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 16760435 - 16760467
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  16760435 attcacagtatataatattctctcattaatcat 16760467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 18706548 - 18706588
Alignment:
Q  269 ccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||| ||||||||||||| |||||||||||| |||||||    
T  18706548 ccaaggatcaactcataacatctcgtgcgacaaagatcgca 18706588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 22949248 - 22949280
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  22949248 attcacagtatataatattctctcattaatcat 22949280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 22953204 - 22953236
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  22953204 attcacagtatataatattctctcattaatcat 22953236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 23871692 - 23871724
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  23871692 attcacagtatataatattctctcattaatcat 23871724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 23875648 - 23875680
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  23875648 attcacagtatataatattctctcattaatcat 23875680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 25629246 - 25629202
Alignment:
Q  257 ctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    |||| ||||| ||||||||||||||| ||||||||||||| ||||    
T  25629246 ctcaatactaccccaaggttcaactcttaacaactcgtgcaacaa 25629202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 25956765 - 25956721
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  25956765 catctttcacaatatataaatattctcacattaatcatcaaagta 25956721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 31477776 - 31477744
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  31477776 attcacagtatataatattctctcattaatcat 31477744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 31630671 - 31630627
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  31630671 catctttcacaatatataaatattctcacattaatcatcaaagta 31630627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 333
Target Start/End: Original strand, 223 - 334
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aaca 321  Q
    |||||||||||||||| |||||| |||   | ||| |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  223 gcttcacagatcatcagtaatattatattcaacccccattcctatcccaaggttcaactcataaaaactcgtgcgacaaagatcgcatttaacctaaaca 322  T
Q  322 aggcattctgta 333  Q
    ||||||||||||    
T  323 aggcattctgta 334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 16 - 48
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  16 tacaaatgcacgtcatcaacatctcaatcatca 48  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 13759 - 13854
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaa 319  Q
    ||||||||||||||| ||| |||| |||||| ||||||||||| ||| |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  13759 cttcacagatcatcactaacatcaaacatattcctcattactaaccccaggttcaactcataacaactcgcgcgacaaagatcgcatttaacctaa 13854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 13548 - 13590
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  13548 catcatcattcacactatgtaatattctctcattaatcatcaa 13590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 13657 - 13689
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  13657 tacaaatgcacgtcatcaacatctcaatcatca 13689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 9324 - 9409
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||| |||||||    
T  9324 tcaactcacaacaactcgtgcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctc 9409  T

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Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 49261588 - 49261674
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| |||||| |||||||||| ||||||||||||||  |||||||||||||||||| |||||||    
T  49261588 tcaactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctc 49261674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 16758847 - 16758933
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||||||| | |  | ||||||| | |||||||||||||||  ||||||||||||||||| |||||||    
T  16758847 gcttcacagatcatcattaatatcataaacaatcttcattacgaccccaaggttcaactctcaacaactcgtgcgacaaagatcgca 16758933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 52927854 - 52927797
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  52927854 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaacaaggcattctgta 52927797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 35981560 - 35981474
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||| ||||||||||| |||||| |||||||||| ||||||||||||||  | |||||||||||||||| |||||||    
T  35981560 tcaactcacatcaattcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctc 35981474  T

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Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 21754284 - 21754341
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21754284 tcaactcacatcaactcgtgcgacaaggatcacatttaacctaacaaggcagtctgta 21754341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 20637097 - 20637183
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | |||||| |||||||| |||||| |||||||||| |||| |||||||||  || ||||||||||||||| |||||||    
T  20637097 tcaactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcgagagcctc 20637183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 28194322 - 28194236
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    ||||||||||||| | |||||||||| |||||||| |||||| |||||| |||| ||||  ||| |||||||||||||| |||||||    
T  28194322 tcaactcataacatcacgtgcgacaaagatcgcatgtaacctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctc 28194236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 12271796 - 12271852
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||||||||||    
T  12271796 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgt 12271852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 353
Target Start/End: Original strand, 20248535 - 20248602
Alignment:
Q  287 caactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcg 353  Q
    ||||| |||||||||| |||||||||||||| || |||||||||||||  | ||||||||||||||||    
T  20248535 caacttgtgcgacaagaatcgcatttaacctaaataaggcattctgtaactagttagctcgcgaggcg 20248602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 24087611 - 24087690
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaag 302  Q
    |||||||||||||||||| ||||| || | |||  ||||  ||||||||| |||||||||| ||| ||||||||||||||    
T  24087611 gcttcacagatcatcatttatatcctatacatctttcatcgctatcccaaagttcaactcacaaccactcgtgcgacaag 24087690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 22237877 - 22237935
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | |||||||||||| || ||||||||||||||| ||||||||||||||||    
T  22237877 tcaactcacatcaactcgtgcgaaaaagatcgcatttaacctaaacaaggcattctgta 22237935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 22921741 - 22921683
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaa-cctaacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| |||||||||||| || ||||||||||||||||    
T  22921741 tcaactcacatcaactcgtgcgacaaagatcgcatttaacccaaacaaggcattctgta 22921683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 35260969 - 35260919
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| ||||| ||||||||||||||| |||||||||||| |||||||    
T  35260969 cattactaccccaatgttcaactcataacatctcgtgcgacaaagatcgca 35260919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 1924986 - 1924954
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  1924986 tacaaatgcacgtcatcaacatctcaatcatca 1924954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 20924000 - 20923968
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  20924000 tacaaatgcacgtcatcaacatctcaatcatca 20923968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 21861441 - 21861385
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | |||||||||||||||   || |||||||||||||||||||||||||    
T  21861441 tcaactcacatcaactcgtgcgacaaatgtcacatttaacctaacaaggcattctgt 21861385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 21896130 - 21896078
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcatt 328  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||||||    
T  21896130 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcatt 21896078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 39243998 - 39243966
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  39243998 tacaaatgcacgtcatcaacatctcaatcatca 39243966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 39247553 - 39247521
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  39247553 tacaaatgcacgtcatcaacatctcaatcatca 39247521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 41388103 - 41388071
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  41388103 tacaaatgcacgtcatcaacatctcaatcatca 41388071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 52940767 - 52940716
Alignment:
Q  258 tcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  52940767 tcattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 52940716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 294401 - 294463
Alignment:
Q  226 tcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataaca 288  Q
    ||||||||||||||||||||| || | | |  ||||| |||||||||||||||||||| ||||    
T  294401 tcacagatcatcattaatatcctatacaactttcattgctatcccaaggttcaactcacaaca 294463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 33681256 - 33681342
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||| ||||| ||||||||||||| ||| ||||||| ||||||  ||| ||  |||||||||| |||||||    
T  33681256 tcaactcacatcaactcgtgtgacaaagatcgcatttaacataagcaaggcactctgtaactgggtaattcgcgaggcgagagcctc 33681342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 21342334 - 21342375
Alignment:
Q  268 cccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||  ||||||||||||||||| |||||||    
T  21342334 cccaaggttcaactctcaacaactcgtgcgacaacgatcgca 21342375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 21347199 - 21347240
Alignment:
Q  268 cccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||  ||||||||||||||||| |||||||    
T  21347199 cccaaggttcaactctcaacaactcgtgcgacaacgatcgca 21347240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 26065136 - 26065221
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||| |||||||| |||||| | | |   |||| ||| ||||||| | ||||||||||| |||||||||||| |||||||    
T  26065136 cttcacagattatcattaacatcatatacaacatccattcctaccccaaggataaactcataacatctcgtgcgacaaagatcgca 26065221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 1925095 - 1925063
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  1925095 attcacagtatataatattctctcattaatcat 1925063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 16368158 - 16368110
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaagg 324  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||    
T  16368158 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 16368110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 20924109 - 20924077
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  20924109 attcacagtatataatattctctcattaatcat 20924077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 28194593 - 28194549
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  28194593 catctttcacaatatataaatattctcacattaatcatcaaagta 28194549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 41387905 - 41387873
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||| ||||||||    
T  41387905 tacaaatgcacgtcatcaacatcttaatcatca 41387873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 43543087 - 43543131
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  43543087 catctttcacaatatataaatattctcacattaatcatcaaagta 43543131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 13188 - 13265
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcg 353  Q
    |||||||| | ||||||||| ||||| |||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  13188 tcaactcacatcaactcgtgtgacaaagatcacatttaacctaacaaggcattctgtaactggttagctcgcgaggcg 13265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 18098 - 18053
Alignment:
Q  287 caactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    ||||||||||||||| | || ||||||||||||||||| |||||||    
T  18098 caactcgtgcgacaaaggtcacatttaacctaacaaggtattctgt 18053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 32784 - 32861
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcg 353  Q
    |||||||| | ||||||||||||||| |||||||||||||| ||||||||||||||||  ||| ||||||||||||||    
T  32784 tcaactcacatcaactcgtgcgacaaagatcgcatttaacccaacaaggcattctgtaactgggtagctcgcgaggcg 32861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 324
Target Start/End: Original strand, 25302 - 25403
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaa 322  Q
    ||||||||||||||||||||||| |||   | || ||||| ||| ||||||| |||||||| ||||||||||||||||| | || |||||| ||||||||    
T  25302 gcttcacagatcatcattaatattatattcaaccttcatttctaccccaaggatcaactcacaacaactcgtgcgacaaaggtcacatttatcctaacaa 25401  T
Q  323 gg 324  Q
    ||    
T  25402 gg 25403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 7058 - 7144
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||| |||||||||| |||||||||||||| ||||||||||||||||  | |||||||||| ||||| |||||||    
T  7058 tcaactcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctc 7144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 13326 - 13412
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||||| |||||||| | |     |||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  13326 gcttcacagatcatcattgatatcatatacaatttccattactaccccaaggtttaactcataacaactcgtgcgacaaagatcgca 13412  T

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Target: scaffold0357; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 16024 - 15938
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||||| |||||||| | |     |||||||| || ||||||||||||||||||||| ||||||||| |||||||    
T  16024 gcttcacagatcatcattgatatcatatacaatttccattactacccaaaggttcaactcataacaacttgtgcgacaaagatcgca 15938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 45664 - 45578
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| ||||||||||| ||| |||||| |||||||||  | |||||||||||||||| |||||||    
T  45664 tcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaagacattctgtaactagttagctcgcgaggcgagagcctc 45578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 353
Target Start/End: Complemental strand, 15704 - 15626
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcg 353  Q
    |||||||| | ||||||||||||||| |||| |||||||| ||| ||||||||||||||  ||||||||||||||||||    
T  15704 tcaactcacatcaactcgtgcgacaaagatcacatttaacataaacaaggcattctgtaactggttagctcgcgaggcg 15626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 225603 - 225689
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||| |||| |||||||||||| |||  | |||| |||| |||||||||||||||  ||||||||||||||||| |||||||    
T  225603 gcttcacagttcattattaatatcatatataatcttcataactaccccaaggttcaactctcaacaactcgtgcgacaaagatcgca 225689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 189234 - 189204
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  189234 tacaaatgcacgtcatcaacatctcaatcat 189204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 189343 - 189311
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  189343 attcacagtatataatattctctcattaatcat 189311  T

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Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 130154 - 130240
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| ||||||||||| ||| ||||||||||| ||||  | |||||||||||||||| |||||||    
T  130154 tcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctc 130240  T

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Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 60639 - 60556
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatc 306  Q
    ||||||||||| ||||||||||||||| | |  |  |||| ||| ||||||||||||||||||||| |||||||||||| ||||    
T  60639 gcttcacagattatcattaatatcatatacaatctccattcctaccccaaggttcaactcataacatctcgtgcgacaaagatc 60556  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 23708543 - 23708457
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||||||| | |  | ||||||| | ||||||||||||||   ||||||||||||||||| |||||||    
T  23708543 gcttcacagatcatcattaatatcataaacaatcttcattacgaccccaaggttcaactatcaacaactcgtgcgacaaagatcgca 23708457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 28406226 - 28406284
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  28406226 tcaactcacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggcattatgta 28406284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 12627814 - 12627737
Alignment:
Q  225 ttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaag 302  Q
    |||||||||||||||| |||||||| | |||  ||||  ||||||||| |||||||||| ||| ||||||||||||||    
T  12627814 ttcacagatcatcatttatatcatatacatctttcatcgctatcccaaagttcaactcacaaccactcgtgcgacaag 12627737  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 19672024 - 19672109
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||| ||||||||||| ||| |||    |||| |||| |||||||||||||||  ||||||||||||||||| |||||||    
T  19672024 gcttcacagattatcattaatattataaataatattcataacta-cccaaggttcaactctcaacaactcgtgcgacaaagatcgca 19672109  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 22134089 - 22134031
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  22134089 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctgta 22134031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 20520116 - 20520031
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||| ||||||||||||||| | | ||  |||| ||| ||||||| | ||||||||||| ||||||| |||| |||||||    
T  20520116 cttcacagattatcattaatatcatatacaacctccattcctaccccaaggataaactcataacatctcgtgcaacaaagatcgca 20520031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 1283676 - 1283708
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  1283676 tacaaatgcacgtcatcaacatctcaatcatca 1283708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 23076677 - 23076774
Alignment:
Q  262 tactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    ||||| ||||| |||||||||  |||||||||||| |||| | |||||   |||||||||||||| ||||| | ||| || ||||||||||| |||||||    
T  23076677 tactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaa--aacctaacaaggcactctgtttctgggtaactcgcgaggcgagagcctc 23076774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 30344848 - 30344816
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  30344848 tacaaatgcacgtcatcaacatctcaatcatca 30344816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 22413060 - 22412974
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||| | ||||||||||||| | | ||  |||| ||| ||||||| |||||| |||||| ||| |||||||| |||||||    
T  22413060 gcttcacagattaacattaatatcatatacaacctccattcctaccccaaggatcaactaataacatctcatgcgacaatgatcgca 22412974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 23004946 - 23005032
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| |||||||||||||| ||| | | ||  |||| ||| || |||| ||||||||||||| | |||||||||| |||||||    
T  23004946 gcttcacatatcatcattaatattatatacaacctccattcctacccaaaggatcaactcataacatcccgtgcgacaaagatcgca 23005032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 31756111 - 31756189
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||||||| |||||||| ||||| || | ||| |||||| ||||||||| ||||| |||| |||  ||||||||||||    
T  31756111 gcttcacagttcatcatttatatcctatacatctctcattgctatcccaaagttcagctcacaacctctcgtgcgacaa 31756189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 23207527 - 23207584
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||  |||||||    
T  23207527 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgta 23207584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1283529 - 1283561
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  1283529 attcacagtatataatattctctcattaatcat 1283561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 22459433 - 22459377
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | ||||||||  ||||| | || |||||||||||||||||||||||||    
T  22459433 tcaactcacatcaactcgtaggacaaaggtcacatttaacctaacaaggcattctgt 22459377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 324
Target Start/End: Original strand, 23791524 - 23791572
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaagg 324  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||    
T  23791524 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 23791572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 30344957 - 30344925
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  30344957 attcacagtatataatattctctcattaatcat 30344925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 1331 - 1388
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  1331 tcaactcacatcaactcgtgtgacaaagatcgcatttaacctaacaaggcattctgta 1388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 332
Target Start/End: Complemental strand, 18248 - 18159
Alignment:
Q  244 atcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgt 332  Q
    |||| |||||| | ||||||||| ||| | ||||||||||||||||||||  |||||| ||| ||||||||||| |||||||||||||||    
T  18248 atcaaacatattcatcattactaaccccaagttcaactcataacaactcgcacgacaaagattgcatttaacctaaacaaggcattctgt 18159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 18363 - 18333
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  18363 tacaaatgcacgtcatcaacatctcaatcat 18333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 18473 - 18431
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    |||||||||||||||| | |||||| |||||||||||||||||    
T  18473 catcatcattcacaatgtgtaatatcctctcattaatcatcaa 18431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 6858 - 6938
Alignment:
Q  274 gttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcg 353  Q
    |||||||||| | ||||||||||||||| ||||||||||||||| ||||| ||||||| ||  ||||||||| ||||||||    
T  6858 gttcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcg 6938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 14238 - 14318
Alignment:
Q  274 gttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcg 353  Q
    |||||||||| | ||||||||||||||| ||||||||||||||| ||||| ||||||| ||  ||||||||| ||||||||    
T  14238 gttcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcg 14318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 7948 - 7864
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcct 360  Q
    |||||||| | ||||||||||||||| ||||||||||| |||||||||||||| ||||  |||  | ||||||||||| ||||||    
T  7948 tcaactcacatcaactcgtgcgacaaagatcgcatttaccctaacaaggcattttgtaactgggcaactcgcgaggcgagagcct 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 29152 - 29095
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | |||||||  |||||| ||||||||| ||||||| |||||||||||||    
T  29152 tcaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaaggcattctgta 29095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 7650 - 7586
Alignment:
Q  270 caaggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||| |||| |||||||||||    
T  7650 caaggttcaactcataacaactcgtactacaaggatctcatttaacctaaacatggcattctgta 7586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 7785 - 7739
Alignment:
Q  12 catcatcattcacaatatataatattctctcattaatcatcaaagta 58  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  7785 catcatcatccacaatatataatattctctcaataatcatcaaagta 7739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 22476 - 22560
Alignment:
Q  225 ttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| ||||| ||||||||||   | || ||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  22476 ttcacagaacatcagtaatatcataatcaaccttcattcctaccccaaggatcaactcataacatctcgtgcgacaaggatcgca 22560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 14043 - 13959
Alignment:
Q  225 ttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| ||||| ||||||||||   | || ||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  14043 ttcacagaacatcagtaatatcataatcaaccttcattcctaccccaaggatcaactcataacatctcgtgcgacaaggatcgca 13959  T

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Target: scaffold1052 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 3093 - 3136
Alignment:
Q  11 acatcatcattcacaatatataatattctctcattaatcatcaa 54  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3093 acatcatcatccacaatatataatattctctcattaatcatcaa 3136  T

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Target: scaffold1257 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 2090 - 2032
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  2090 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgta 2032  T

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Target: scaffold0211 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 28683 - 28625
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  28683 tcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgta 28625  T

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Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 40046 - 39960
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | |||||||||| |||| ||||||||||||||| || |||||||| ||||  | |||||||||||||||| |||||||    
T  40046 tcaactcacatcaactcgtgcaacaaagatcgcatttaacctaaataaggcattttgtaactagttagctcgcgaggcgagagcctc 39960  T

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Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 101642 - 101685
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa 319  Q
    |||||||| | |||||||||||||||||||| ||||||||||||    
T  101642 tcaactcacatcaactcgtgcgacaaggatcacatttaacctaa 101685  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 26355572 - 26355486
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||| ||||||||| ||||||||||||| ||| ||||||||||||||  | ||||||||| |||||| |||||||    
T  26355572 tcaactcacatcaacttgtgcgacaaagatcgcatttaacataaacaaggcattctgtaactagttagctcgtgaggcgagagcctc 26355486  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 39834079 - 39834165
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    ||||||||||||| | |||| ||||| ||||||||||||| | ||||||| ||||||||  ||| |||||||||||||| |||||||    
T  39834079 tcaactcataacatcacgtgggacaaagatcgcatttaacttaaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctc 39834165  T

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Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 21285846 - 21285903
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | |||||||||||| || |||||||||||||||||||| ||||||||||    
T  21285846 tcaactcacatcaactcgtgcgataaagatcgcatttaacctaacaaagcattctgta 21285903  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 6520616 - 6520678
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttgg 338  Q
    |||||||| | |||||| ||| |||| |||||||||||||||||||| |||||||||| ||||    
T  6520616 tcaactcacatcaactcatgcaacaaagatcgcatttaacctaacaaagcattctgtaattgg 6520678  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 40492777 - 40492691
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||||| ||| | | ||  |||| ||| | ||||| |||||||| |||| |||||||||||| |||||||    
T  40492777 gcttcacagatcatcattaatattatatacaacctccattcctaccacaaggatcaactcacaacatctcgtgcgacaaagatcgca 40492691  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 23760713 - 23760656
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | ||||| ||||||||| ||||||||||| |||||||||||||| ||||    
T  23760713 tcaactcacatcaacttgtgcgacaaagatcgcatttatcctaacaaggcattttgta 23760656  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 18862502 - 18862470
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  18862502 tacaaatgcacgtcatcaacatctcaatcatca 18862470  T

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Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 21387326 - 21387358
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  21387326 tacaaatgcacgtcatcaacatctcaatcatca 21387358  T

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Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 21411199 - 21411231
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  21411199 tacaaatgcacgtcatcaacatctcaatcatca 21411231  T

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Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 21805691 - 21805723
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  21805691 tacaaatgcacgtcatcaacatctcaatcatca 21805723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 21827871 - 21827839
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  21827871 tacaaatgcacgtcatcaacatctcaatcatca 21827839  T

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Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 41598382 - 41598466
Alignment:
Q  225 ttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||||||||||||||||||| ||| |||    |||| |||| |||||||||||||||  ||| ||||||||| ||| |||||||    
T  41598382 ttcacagatcatcattaatattatatataatattcataactaccccaaggttcaactctcaacgactcgtgcggcaaagatcgca 41598466  T

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Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 21255470 - 21255525
Alignment:
Q  278 aactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||| | |||||||  |||||| ||||||||||||||||| |||||||||||||    
T  21255470 aactcacatcaactcgaacgacaaagatcgcatttaacctaaaaaggcattctgta 21255525  T

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Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 19154810 - 19154724
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||| |||||||||||||| | | ||| ||  |||| |||  |||||| ||||||| ||||| |||||||||||| |||||||    
T  19154810 gcttcacaaatcatcattaatattacatataacctccattcctacaccaaggatcaactcgtaacatctcgtgcgacaaagatcgca 19154724  T

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Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 20533297 - 20533247
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  20533297 cattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 20533247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 22963308 - 22963258
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  22963308 cattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgca 22963258  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 23668041 - 23668091
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  23668041 cattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgca 23668091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 24707733 - 24707655
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    ||||| |||||||||||| ||||| || | |||  |||||  |||||||| |||||||||| ||| |||||||||||||    
T  24707733 gcttctcagatcatcatttatatcctatacatctttcattgttatcccaaagttcaactcacaactactcgtgcgacaa 24707655  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 37515937 - 37515987
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  37515937 cattcctaccccaaggatcaacttataacatctcgtgcgacaaggatcgca 37515987  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 364150 - 364215
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataaca 288  Q
    ||||||||||||||| |||||||| || | | |  ||||| |||||||||||||||||||| ||||    
T  364150 gcttcacagatcatccttaatatcctatacaactttcattgctatcccaaggttcaactcacaaca 364215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 5866149 - 5866092
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||| | |||||||  |||||| ||||||||| ||||||| |||||||||||||    
T  5866149 tcaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaaggcattctgta 5866092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 14103148 - 14103063
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||| ||||||||||| ||||||||   | ||  |||| ||| ||||||| ||||||| ||||| |||||||||||| |||||||    
T  14103148 cttcatagatcatcatttatatcatattcaacctccattcctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcgca 14103063  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 21249650 - 21249687
Alignment:
Q  296 cgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  21249650 cgacaaagatcgcatttaacctaaaaaggcattctgta 21249687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 1327169 - 1327125
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  1327169 catcgttcacaatatataaatattctcacattaatcatcaaagta 1327125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 18862611 - 18862579
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  18862611 attcacagtatataatattctctcattaatcat 18862579  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 21827980 - 21827948
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  21827980 attcacagtatataatattctctcattaatcat 21827948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 324
Target Start/End: Original strand, 22364911 - 22364959
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaagg 324  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||    
T  22364911 tcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 22364959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 22875295 - 22875347
Alignment:
Q  257 ctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||  |||||||    
T  22875295 ctcaatactaccccaaggttcaactcttaacaacttgtgcgacatagatcgca 22875347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 24353273 - 24353329
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | ||||||||||||||| | || |||||| |||||||||| |||||||    
T  24353273 tcaactcacatcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgt 24353329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 27472440 - 27472396
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  27472440 catctttcacaatatataaatattctcacattaatcatcaaagta 27472396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 38550135 - 38550091
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  38550135 catctttcacaatatataaatattctcacattaatcatcaaagta 38550091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 2162 - 2117
Alignment:
Q  289 actcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  2162 actcgtgcgacaaggatcgcatttaacctaaacaaggcattctgta 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 10776 - 10861
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||  |||||||||||||||||||||||||| || |  | | || ||||||||||| |||||||    
T  10776 tcaactcacatcaactcgtgcgacagagatcgcatttaacctaacaaggcattttggaactaggtaactcgcgaggcgagagcctc 10861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 26832 - 26892
Alignment:
Q  272 aggttcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctg 331  Q
    |||||||||| ||||||||||| ||||||| |||| |||||||||| ||||||||||||||    
T  26832 aggttcaacttataacaactcgcgcgacaaagatcacatttaacctaaacaaggcattctg 26892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 24516 - 24436
Alignment:
Q  229 cagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||||||||   | ||  |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  24516 cagatcatcattaatatcatattcaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 24436  T

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Target: scaffold0810 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 3179 - 3237
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||||||||   |||||||||| ||||||||||||||| ||||||||||||||||    
T  3179 tcaactcataacattacgtgcgacaaagatcgcatttaacctaaacaaggcattctgta 3237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 3252 - 3174
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaa 301  Q
    |||||||||||||||| ||||||||||   | ||  |||| ||| ||||||| ||||||||||||| ||||||||||||    
T  3252 gcttcacagatcatcagtaatatcatattcaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaa 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 10413 - 10363
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggca 326  Q
    |||||||| | |||||||||| |||| ||||||||||||||||||||||||    
T  10413 tcaactcacatcaactcgtgcaacaaagatcgcatttaacctaacaaggca 10363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 27591 - 27521
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcg 293  Q
    |||||||||||||||||| |||||||| | |     |||||||| ||||||||||||||||||||||||||    
T  27591 gcttcacagatcatcattgatatcatatacaatttccattactaccccaaggttcaactcataacaactcg 27521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 10009 - 9923
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||| |||||| |||   | ||  |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  10009 gcttcacagatcatcagtaatattatattcaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 9923  T

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Target: scaffold0621 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 8729 - 8774
Alignment:
Q  287 caactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    ||||||||||||||| | || |||||||||||||||||||||||||    
T  8729 caactcgtgcgacaaaggtcacatttaacctaacaaggcattctgt 8774  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 332
Target Start/End: Complemental strand, 85549 - 85440
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaa 322  Q
    ||||||||||||||| ||||||| | | |||    |||| ||||||| |||| |||||||| |||||||||| |||| | | || | |||||||||||||    
T  85549 gcttcacagatcatcgttaatattaaaaataatattcataactatcctaaggatcaactcacaacaactcgtacgacgaaggtcacttttaacctaacaa 85450  T
Q  323 ggcattctgt 332  Q
    || |||||||    
T  85449 ggtattctgt 85440  T

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Target: scaffold0413 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 15540 - 15456
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcg 307  Q
    ||||||||||||||||||||||| ||| |||   | ||| |||| |||||||||||||||  ||| | ||||||||||| |||||    
T  15540 gcttcacagatcatcattaatattatatataatacacataactaccccaaggttcaactctcaacgattcgtgcgacaaagatcg 15456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 12817 - 12902
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | | ||||||||||||| | || |||||||||||||||||  |||||| | |  | ||||||||||||| |||||||    
T  12817 tcaactcacatccactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtctctcatgagctcgcgaggcgagagcctc 12902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 16491 - 16388
Alignment:
Q  257 ctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcggga 356  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||  |||||||   | || ||||||||| ||||| ||||| |  ||||||||||| ||    
T  16491 ctcaatactaccccaaggttcaactcctaacaacttgtgcgacacagatcgca-aaatcccaacaaggcactctgtttttgggtcactcgcgaggcgaga 16393  T
Q  357 gcctc 361  Q
    |||||    
T  16392 gcctc 16388  T

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Target: scaffold0141 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 33340 - 33420
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaagg 303  Q
    ||||||||| |||||||| ||||| || | ||| |||||| ||||||||| ||||| |||| |||  ||||||||||||||    
T  33340 gcttcacagttcatcatttatatcctatacatctctcattgctatcccaaagttcagctcacaacctctcgtgcgacaagg 33420  T

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Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 14053 - 14021
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  14053 attcacagtatataatattctctcattaatcat 14021  T

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Target: scaffold0080 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 49011 - 48979
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcatca 155  Q
    |||||||||||||||||||||||||||||||||    
T  49011 tacaaatgcacgtcatcaacatctcaatcatca 48979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 19756 - 19699
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgta 333  Q
    |||||||||| |||| |||||||||| | || |||||||||||||||||  |||||||    
T  19756 tcaactcatatcaacccgtgcgacaaaggtcacatttaacctaacaaggtgttctgta 19699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 81472 - 81392
Alignment:
Q  223 gcttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaagg 303  Q
    ||||||||| |||||||| ||||| || | ||| |||||| ||||||||| ||||| |||| |||  ||||||||||||||    
T  81472 gcttcacagttcatcatttatatcctatacatctctcattgctatcccaaagttcagctcacaacctctcgtgcgacaagg 81392  T

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Target: scaffold0507 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 7930 - 7875
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctg 331  Q
    |||||||| | ||| || |||||||| |||||||||||||||| ||||||||||||    
T  7930 tcaactcacatcaattcttgcgacaaagatcgcatttaacctagcaaggcattctg 7875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 32845 - 32747
Alignment:
Q  262 tactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    ||||| ||||||||||||||| |||||| | ||||||||  |||||||   | ||||||||| |||||||| | ||| |  |||||||||||||||||||    
T  32845 tactaccccaaggttcaactcttaacaattggtgcgacacagatcgca-aaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcctc 32747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 46160 - 46258
Alignment:
Q  262 tactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    ||||| ||||||||||||||| |||||| | ||||||||  |||||||   | ||||||||| |||||||| | ||| |  |||||||||||||||||||    
T  46160 tactaccccaaggttcaactcttaacaattggtgcgacacagatcgca-aaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcctc 46258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 360
Target Start/End: Original strand, 4753 - 4855
Alignment:
Q  257 ctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcggga 356  Q
    |||| ||||| | ||||||||||||| ||||||||||||| |||| | |||||   | ||||||| |||||||||| | ||| ||||| |||||||| ||    
T  4753 ctcaatactacctcaaggttcaactcttaacaactcgtgcaacaaaggtcgca-aaatcctaacatggcattctgtttctgggtagcttgcgaggcgaga 4851  T
Q  357 gcct 360  Q
    ||||    
T  4852 gcct 4855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 377 - 463
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | |||||||| |||||| ||||||||||||| ||| |||| |||||||||  ||| |  ||||||||||| |||||||    
T  377 tcaactcacatcaactcgtacgacaaagatcgcatttaacataagcaagacattctgtaactgggtcactcgcgaggcgagagcctc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 2676 - 2618
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | |||||||||||||||||||| |||||  ||| ||||||||||||||||    
T  2676 tcaactcacatcaactcgtgcgacaaggatcacatttttcctaaacaaggcattctgta 2618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 13015 - 13073
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| ||| ||||||||||| ||||||||||| ||||    
T  13015 tcaactcacatcaactcgtgcgacaaagattgcatttaacctaaacaaggcattttgta 13073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 646 - 676
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  646 tacaaatgcacgtcatcaacatctcaatcat 676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 537 - 569
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  537 attcacagtatataatattctctcattaatcat 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 17734 - 17784
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  17734 cattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgca 17784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 11358 - 11328
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  11358 tacaaatgcacgtcatcaacatctcaatcat 11328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 11467 - 11435
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  11467 attcacagtatataatattctctcattaatcat 11435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 2517 - 2459
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||| ||||||||| ||||||||||| ||| ||||||||||||||||    
T  2517 tcaactcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgta 2459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 29312 - 29262
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  29312 cattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgca 29262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 32517 - 32487
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  32517 tacaaatgcacgtcatcaacatctcaatcat 32487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 32626 - 32594
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  32626 attcacagtatataatattctctcattaatcat 32594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 19513 - 19571
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaa-caaggcattctgta 333  Q
    |||||||| | ||||| ||||||||||||||||||||||| ||| |||| |||||||||    
T  19513 tcaactcacatcaacttgtgcgacaaggatcgcatttaacataagcaagacattctgta 19571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 55573 - 55523
Alignment:
Q  259 cattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||| ||||||| ||||||||||||| |||||||||||| |||||||    
T  55573 cattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgca 55523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 35943 - 35913
Alignment:
Q  123 tacaaatgcacgtcatcaacatctcaatcat 153  Q
    |||||||||||||||||||||||||||||||    
T  35943 tacaaatgcacgtcatcaacatctcaatcat 35913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 36052 - 36020
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  36052 attcacagtatataatattctctcattaatcat 36020  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 132900 - 132958
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacct-aacaaggcattctgta 333  Q
    |||||||| | ||||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  132900 tcaactcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcattatgta 132958  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 85749 - 85827
Alignment:
Q  231 gatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||||||||||||||||||   | ||  |||| ||| ||||||| ||||||| ||||| |||||||||||| |||||||    
T  85749 gatcatcattaatatcatatccaacctccattcctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcgca 85827  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 85225 - 85269
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  85225 catctttcacaatatataaatattctcacattaatcatcaaagta 85269  T

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Target: scaffold0737 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 1669 - 1584
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctc 361  Q
    |||||||| | ||||||||||||||| | || ||| |||||||||||||  ||||||| ||||  | ||| ||||||| |||||||    
T  1669 tcaactcacatcaactcgtgcgacaaaggtcacatgtaacctaacaaggtgttctgtaattgggcatctcacgaggcgagagcctc 1584  T

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Target: scaffold0356 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 585 - 500
Alignment:
Q  224 cttcacagatcatcattaatatcatacatatccctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    ||||| ||||||||||| ||||||||   | ||  |||| ||| ||||||| ||||||| ||||| |||||||||||| |||||||    
T  585 cttcatagatcatcatttatatcatattcaacctccattcctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcgca 500  T

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Target: scaffold1403 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 324
Target Start/End: Original strand, 798 - 846
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaagg 324  Q
    |||||||| | ||||||||||||||| | || |||||||||||||||||    
T  798 tcaactcacatcaactcgtgcgacaaaggtctcatttaacctaacaagg 846  T

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Target: scaffold1351 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 255 - 311
Alignment:
Q  276 tcaactcataacaactcgtgcgacaaggatcgcatttaacctaacaaggcattctgt 332  Q
    |||||||| | ||||| ||||||||| | || ||||||||||||||||| |||||||    
T  255 tcaactcacatcaacttgtgcgacaaaggtcacatttaacctaacaaggtattctgt 311  T

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Target: scaffold0676 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 591 - 623
Alignment:
Q  19 attcacaatatataatattctctcattaatcat 51  Q
    ||||||| |||||||||||||||||||||||||    
T  591 attcacagtatataatattctctcattaatcat 623  T

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Target: scaffold0228 (Bit Score: 29; Significance: 0.0000005; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 4737 - 4789
Alignment:
Q  257 ctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||  |||||||    
T  4737 ctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgca 4789  T

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Target: scaffold0228; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 12319 - 12371
Alignment:
Q  257 ctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||  |||||||    
T  12319 ctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgca 12371  T

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Target: scaffold0228; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 22271 - 22323
Alignment:
Q  257 ctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||  |||||||    
T  22271 ctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgca 22323  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 43928 - 43884
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  43928 catctttcacaatatataaatattctcacattaatcatcaaagta 43884  T

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Target: scaffold0100 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 36192 - 36148
Alignment:
Q  15 catcattcacaatatataa-tattctctcattaatcatcaaagta 58  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||    
T  36192 catctttcacaatatataaatattctcacattaatcatcaaagta 36148  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 10393 - 10445
Alignment:
Q  257 ctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcgca 309  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||  |||||||    
T  10393 ctcaatactaccccaaggttcaactcttaacaacttgtgcgacacagatcgca 10445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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