View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0657_high_9 (Length: 211)

Name: NF0657_high_9
Description: NF0657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0657_high_9
NF0657_high_9
[»] chr2 (63 HSPs)
chr2 (1-203)||(24850573-24850776)
chr2 (1-203)||(25829124-25829326)
chr2 (1-203)||(30666979-30667181)
chr2 (4-203)||(13963889-13964088)
chr2 (3-203)||(23234997-23235197)
chr2 (1-203)||(9015278-9015478)
chr2 (1-203)||(20568658-20568860)
chr2 (1-203)||(21537156-21537358)
chr2 (3-203)||(24377091-24377291)
chr2 (1-203)||(25037167-25037369)
chr2 (1-203)||(25041274-25041476)
chr2 (1-199)||(30621210-30621408)
chr2 (1-199)||(30623831-30624029)
chr2 (11-203)||(18376824-18377016)
chr2 (3-203)||(19540406-19540606)
chr2 (1-203)||(10009657-10009860)
chr2 (1-203)||(22188010-22188212)
chr2 (1-203)||(24576025-24576228)
chr2 (3-203)||(22317583-22317784)
chr2 (5-187)||(38781405-38781587)
chr2 (1-176)||(20151944-20152118)
chr2 (2-203)||(28140528-28140729)
chr2 (11-203)||(24779333-24779525)
chr2 (1-167)||(22260432-22260598)
chr2 (33-203)||(40782467-40782637)
chr2 (16-187)||(6574045-6574218)
chr2 (11-203)||(39037560-39037752)
chr2 (11-200)||(25189391-25189579)
chr2 (4-203)||(23595481-23595677)
chr2 (15-203)||(41121642-41121829)
chr2 (11-203)||(22454908-22455100)
chr2 (13-203)||(31800807-31800997)
chr2 (13-203)||(28711618-28711808)
chr2 (13-176)||(45087102-45087267)
chr2 (14-187)||(6392639-6392814)
chr2 (18-187)||(26619027-26619195)
chr2 (1-187)||(31327875-31328060)
chr2 (1-187)||(31334596-31334781)
chr2 (13-186)||(28701149-28701322)
chr2 (1-187)||(22802466-22802650)
chr2 (13-187)||(30557239-30557415)
chr2 (82-203)||(35743989-35744110)
chr2 (1-115)||(7609039-7609154)
chr2 (18-203)||(23184236-23184414)
chr2 (1-175)||(34321846-34322018)
chr2 (10-187)||(18430858-18431034)
chr2 (18-187)||(19115089-19115257)
chr2 (22-186)||(22272139-22272303)
chr2 (111-203)||(28550936-28551028)
chr2 (111-203)||(44840424-44840516)
chr2 (1-203)||(33074216-33074416)
chr2 (111-203)||(22776306-22776398)
chr2 (111-203)||(22781684-22781776)
chr2 (111-203)||(31968061-31968153)
chr2 (111-203)||(40332077-40332169)
chr2 (18-187)||(44881173-44881341)
chr2 (111-187)||(1587051-1587127)
chr2 (111-175)||(14581533-14581597)
chr2 (111-186)||(3277037-3277112)
chr2 (132-187)||(23392707-23392762)
chr2 (18-187)||(18702744-18702912)
chr2 (162-203)||(22258191-22258232)
chr2 (111-187)||(22785673-22785749)
[»] chr8 (55 HSPs)
chr8 (1-203)||(39693523-39693725)
chr8 (3-203)||(19156184-19156384)
chr8 (1-203)||(602681-602883)
chr8 (1-176)||(33082872-33083047)
chr8 (1-200)||(12757724-12757923)
chr8 (1-203)||(16188972-16189174)
chr8 (1-203)||(16207294-16207496)
chr8 (1-203)||(16681264-16681466)
chr8 (1-203)||(21932871-21933073)
chr8 (1-200)||(17525689-17525889)
chr8 (1-203)||(17914447-17914649)
chr8 (1-203)||(29693303-29693505)
chr8 (3-203)||(24646326-24646526)
chr8 (1-200)||(17441769-17441967)
chr8 (1-200)||(18321120-18321319)
chr8 (4-203)||(18679803-18680002)
chr8 (4-203)||(18718989-18719188)
chr8 (16-203)||(23185202-23185389)
chr8 (1-202)||(20382355-20382556)
chr8 (11-203)||(17701733-17701925)
chr8 (1-187)||(19943239-19943427)
chr8 (1-203)||(18121070-18121269)
chr8 (3-202)||(17267463-17267661)
chr8 (1-185)||(23263572-23263757)
chr8 (16-202)||(30421404-30421591)
chr8 (1-203)||(17797410-17797610)
chr8 (4-135)||(20255529-20255660)
chr8 (17-203)||(43644884-43645069)
chr8 (13-203)||(45538412-45538602)
chr8 (13-186)||(24551279-24551452)
chr8 (1-187)||(15336051-15336235)
chr8 (1-187)||(15425116-15425300)
chr8 (1-187)||(15516420-15516604)
chr8 (4-187)||(18722610-18722793)
chr8 (4-187)||(18730955-18731138)
chr8 (4-200)||(19707497-19707692)
chr8 (13-187)||(1237641-1237815)
chr8 (10-187)||(18685367-18685544)
chr8 (14-203)||(40845362-40845550)
chr8 (13-187)||(9320572-9320748)
chr8 (1-84)||(22745594-22745677)
chr8 (18-185)||(22461617-22461783)
chr8 (13-203)||(22673766-22673956)
chr8 (72-181)||(19956373-19956482)
chr8 (1-203)||(36105183-36105383)
chr8 (111-203)||(14989522-14989614)
chr8 (13-187)||(24833029-24833204)
chr8 (127-203)||(25164058-25164134)
chr8 (94-187)||(45567955-45568048)
chr8 (111-187)||(13430699-13430775)
chr8 (111-203)||(18151717-18151809)
chr8 (1-187)||(22663120-22663304)
chr8 (111-203)||(6407714-6407806)
chr8 (111-203)||(21301010-21301102)
chr8 (111-187)||(18772624-18772699)
[»] chr1 (51 HSPs)
chr1 (1-203)||(28492287-28492489)
chr1 (1-203)||(33256234-33256436)
chr1 (1-203)||(33276406-33276608)
chr1 (1-203)||(22153852-22154054)
chr1 (1-203)||(1577862-1578064)
chr1 (2-203)||(19717519-19717720)
chr1 (1-203)||(10757416-10757619)
chr1 (1-203)||(1900340-1900542)
chr1 (1-203)||(20954356-20954558)
chr1 (4-203)||(12284418-12284617)
chr1 (1-203)||(22600065-22600267)
chr1 (1-203)||(38282562-38282763)
chr1 (3-186)||(32785823-32786005)
chr1 (1-203)||(22201619-22201821)
chr1 (4-203)||(48704199-48704398)
chr1 (4-203)||(36134185-36134383)
chr1 (4-186)||(35401821-35402003)
chr1 (1-203)||(2268526-2268725)
chr1 (16-203)||(22427255-22427442)
chr1 (1-203)||(29215792-29215992)
chr1 (16-187)||(22464706-22464878)
chr1 (4-187)||(16235182-16235365)
chr1 (16-187)||(39200890-39201061)
chr1 (16-186)||(2267101-2267271)
chr1 (15-203)||(12613713-12613899)
chr1 (1-200)||(30893090-30893290)
chr1 (13-187)||(2834701-2834875)
chr1 (13-203)||(35040161-35040351)
chr1 (4-186)||(23036413-23036595)
chr1 (15-200)||(21191763-21191947)
chr1 (13-203)||(25448461-25448651)
chr1 (11-203)||(21028788-21028980)
chr1 (1-187)||(7309830-7310015)
chr1 (11-203)||(26702022-26702214)
chr1 (15-183)||(17024862-17025029)
chr1 (1-203)||(48570117-48570316)
chr1 (1-187)||(2327324-2327509)
chr1 (59-187)||(30572208-30572336)
chr1 (1-203)||(21702809-21703008)
chr1 (38-187)||(14263371-14263520)
chr1 (1-203)||(44821430-44821630)
chr1 (111-203)||(21121057-21121149)
chr1 (111-203)||(21135153-21135245)
chr1 (111-187)||(21984607-21984683)
chr1 (111-203)||(46088984-46089076)
chr1 (94-187)||(7745066-7745159)
chr1 (111-184)||(42284642-42284715)
chr1 (58-186)||(18896537-18896665)
chr1 (111-203)||(37642243-37642335)
chr1 (111-187)||(21204916-21204992)
chr1 (154-203)||(34255552-34255601)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-203)||(14644-14846)
[»] chr5 (46 HSPs)
chr5 (1-203)||(23412917-23413119)
chr5 (3-203)||(17814960-17815160)
chr5 (1-203)||(6512374-6512573)
chr5 (1-203)||(89365-89567)
chr5 (1-203)||(21910548-21910750)
chr5 (1-203)||(20550887-20551089)
chr5 (1-203)||(7745636-7745838)
chr5 (1-203)||(41566377-41566579)
chr5 (1-203)||(21072184-21072385)
chr5 (1-203)||(19536243-19536446)
chr5 (1-203)||(26784346-26784548)
chr5 (1-187)||(13545463-13545641)
chr5 (16-203)||(33022656-33022843)
chr5 (16-203)||(31117869-31118057)
chr5 (1-203)||(11993880-11994080)
chr5 (13-203)||(4887014-4887204)
chr5 (11-187)||(25096777-25096955)
chr5 (11-187)||(25154747-25154925)
chr5 (16-203)||(23881059-23881246)
chr5 (1-187)||(30742988-30743172)
chr5 (11-203)||(6499231-6499423)
chr5 (11-203)||(21198958-21199148)
chr5 (11-187)||(642661-642836)
chr5 (13-187)||(15516977-15517151)
chr5 (26-203)||(12352763-12352940)
chr5 (13-203)||(14086492-14086684)
chr5 (11-203)||(21099658-21099849)
chr5 (1-187)||(42243688-42243873)
chr5 (13-203)||(33933259-33933453)
chr5 (111-203)||(9398787-9398879)
chr5 (1-187)||(26759157-26759341)
chr5 (84-203)||(30115863-30115982)
chr5 (82-203)||(29138430-29138551)
chr5 (82-203)||(28139599-28139720)
chr5 (94-187)||(32160774-32160867)
chr5 (59-187)||(26765506-26765634)
chr5 (111-203)||(35932059-35932151)
chr5 (59-200)||(3245442-3245583)
chr5 (111-203)||(9088961-9089053)
chr5 (83-187)||(11208011-11208114)
chr5 (111-200)||(28464392-28464481)
chr5 (111-203)||(35986284-35986377)
chr5 (11-55)||(9398698-9398742)
chr5 (111-203)||(25930209-25930301)
chr5 (154-203)||(21660204-21660253)
chr5 (111-203)||(10848765-10848857)
[»] chr4 (52 HSPs)
chr4 (1-203)||(29680463-29680665)
chr4 (1-203)||(19666362-19666564)
chr4 (1-203)||(16632430-16632632)
chr4 (3-203)||(37985533-37985733)
chr4 (3-195)||(12601099-12601291)
chr4 (1-203)||(3395580-3395782)
chr4 (1-203)||(19620980-19621182)
chr4 (1-203)||(37435454-37435656)
chr4 (1-203)||(12811097-12811296)
chr4 (8-203)||(9140902-9141097)
chr4 (1-187)||(14604825-14605012)
chr4 (1-203)||(55380280-55380482)
chr4 (1-187)||(45833400-45833586)
chr4 (1-203)||(19884692-19884893)
chr4 (16-190)||(22675454-22675628)
chr4 (1-203)||(19911799-19912002)
chr4 (1-140)||(14833449-14833588)
chr4 (4-200)||(56034567-56034763)
chr4 (16-203)||(13576048-13576235)
chr4 (3-176)||(3483738-3483911)
chr4 (1-203)||(10072925-10073126)
chr4 (1-203)||(14904275-14904477)
chr4 (13-187)||(413008-413182)
chr4 (14-187)||(17247250-17247422)
chr4 (11-203)||(40846089-40846281)
chr4 (15-203)||(6641674-6641861)
chr4 (13-201)||(29121362-29121550)
chr4 (1-203)||(10692841-10693041)
chr4 (1-203)||(10906607-10906807)
chr4 (13-187)||(8105643-8105819)
chr4 (1-187)||(54679936-54680118)
chr4 (1-203)||(23750512-23750712)
chr4 (1-203)||(6517475-6517675)
chr4 (11-137)||(15139283-15139409)
chr4 (58-187)||(11915706-11915835)
chr4 (94-203)||(16853493-16853602)
chr4 (1-96)||(23123528-23123623)
chr4 (39-187)||(56533018-56533167)
chr4 (65-187)||(25651087-25651209)
chr4 (1-203)||(3105341-3105540)
chr4 (36-175)||(16940034-16940172)
chr4 (111-203)||(17398703-17398795)
chr4 (111-203)||(22190836-22190928)
chr4 (18-175)||(41114707-41114863)
chr4 (111-203)||(38513868-38513960)
chr4 (111-203)||(40860657-40860749)
chr4 (112-201)||(3499682-3499771)
chr4 (111-203)||(9751569-9751661)
chr4 (94-187)||(1672395-1672488)
chr4 (94-187)||(1674870-1674963)
chr4 (111-203)||(15475172-15475264)
chr4 (135-203)||(39419787-39419855)
[»] chr3 (62 HSPs)
chr3 (1-203)||(14392966-14393168)
chr3 (1-203)||(49642724-49642926)
chr3 (1-203)||(2561183-2561385)
chr3 (1-203)||(37467328-37467530)
chr3 (1-201)||(28582103-28582303)
chr3 (1-200)||(17238884-17239083)
chr3 (18-203)||(41494994-41495179)
chr3 (1-200)||(15903196-15903396)
chr3 (1-203)||(20646149-20646352)
chr3 (1-187)||(38177605-38177791)
chr3 (1-200)||(13948334-13948533)
chr3 (1-203)||(6090727-6090929)
chr3 (1-203)||(12963047-12963249)
chr3 (1-203)||(18121584-18121786)
chr3 (1-203)||(31303381-31303583)
chr3 (1-203)||(12726192-12726394)
chr3 (1-203)||(16658580-16658782)
chr3 (30-203)||(13780575-13780748)
chr3 (11-203)||(29951410-29951602)
chr3 (11-203)||(30000564-30000756)
chr3 (1-203)||(18142714-18142916)
chr3 (4-176)||(13824091-13824263)
chr3 (1-184)||(14969341-14969524)
chr3 (16-203)||(40799869-40800056)
chr3 (11-203)||(16032520-16032711)
chr3 (16-187)||(47207717-47207889)
chr3 (1-185)||(52920419-52920602)
chr3 (16-203)||(47405398-47405585)
chr3 (3-203)||(19888908-19889107)
chr3 (1-187)||(49553451-49553637)
chr3 (19-187)||(11223574-11223742)
chr3 (11-202)||(12388845-12389035)
chr3 (1-203)||(24775498-24775698)
chr3 (65-203)||(22804049-22804187)
chr3 (13-203)||(53056701-53056891)
chr3 (21-186)||(46349826-46349991)
chr3 (1-186)||(20627395-20627578)
chr3 (1-187)||(2785075-2785260)
chr3 (11-174)||(19249385-19249547)
chr3 (1-203)||(22140759-22140959)
chr3 (15-187)||(20725098-20725269)
chr3 (17-187)||(14955438-14955608)
chr3 (4-203)||(25398238-25398419)
chr3 (13-187)||(33583240-33583416)
chr3 (21-187)||(29855420-29855587)
chr3 (18-187)||(12968317-12968485)
chr3 (13-129)||(11869137-11869253)
chr3 (111-203)||(21636742-21636834)
chr3 (132-203)||(11868264-11868335)
chr3 (18-185)||(23538146-23538312)
chr3 (94-186)||(11909079-11909171)
chr3 (1-187)||(5213588-5213771)
chr3 (65-187)||(21640878-21641000)
chr3 (111-203)||(21605726-21605818)
chr3 (132-203)||(30054310-30054381)
chr3 (18-175)||(26417659-26417815)
chr3 (94-150)||(45858804-45858860)
chr3 (49-176)||(50300245-50300372)
chr3 (94-160)||(51341040-51341107)
chr3 (111-176)||(40850990-40851055)
chr3 (1-105)||(49666379-49666480)
chr3 (111-203)||(46796439-46796531)
[»] chr7 (69 HSPs)
chr7 (1-203)||(44467056-44467259)
chr7 (1-203)||(13302802-13303004)
chr7 (1-203)||(10883137-10883339)
chr7 (1-202)||(15088513-15088714)
chr7 (1-201)||(13730639-13730839)
chr7 (3-203)||(21695393-21695593)
chr7 (1-203)||(2500030-2500232)
chr7 (1-203)||(21692279-21692481)
chr7 (1-203)||(2913572-2913774)
chr7 (1-203)||(11792899-11793101)
chr7 (1-203)||(13137859-13138061)
chr7 (1-200)||(24788136-24788335)
chr7 (1-203)||(9069554-9069756)
chr7 (5-203)||(16316525-16316723)
chr7 (3-200)||(28409034-28409231)
chr7 (7-203)||(13880096-13880292)
chr7 (1-200)||(21283337-21283536)
chr7 (1-203)||(12366712-12366914)
chr7 (1-203)||(13648721-13648923)
chr7 (1-203)||(22577985-22578187)
chr7 (1-203)||(33691676-33691878)
chr7 (1-187)||(15467924-15468110)
chr7 (3-200)||(11319400-11319597)
chr7 (1-203)||(29935323-29935524)
chr7 (4-200)||(5000788-5000985)
chr7 (1-203)||(30944289-30944489)
chr7 (16-203)||(9709781-9709968)
chr7 (15-198)||(19237022-19237204)
chr7 (1-186)||(30945322-30945505)
chr7 (3-203)||(30025897-30026097)
chr7 (17-200)||(39284545-39284727)
chr7 (1-187)||(23279923-23280108)
chr7 (1-203)||(28622322-28622522)
chr7 (1-203)||(48236868-48237068)
chr7 (11-203)||(13018479-13018671)
chr7 (4-174)||(13692372-13692533)
chr7 (1-200)||(14426542-14426739)
chr7 (16-203)||(33605677-33605865)
chr7 (66-201)||(14193108-14193243)
chr7 (88-203)||(16309958-16310073)
chr7 (15-176)||(13880607-13880768)
chr7 (12-203)||(331637-331828)
chr7 (1-203)||(13260587-13260781)
chr7 (4-187)||(13893966-13894148)
chr7 (13-203)||(16111860-16112050)
chr7 (13-200)||(35952663-35952851)
chr7 (18-203)||(41842254-41842439)
chr7 (65-203)||(4821466-4821603)
chr7 (39-176)||(12174342-12174480)
chr7 (1-63)||(4494638-4494700)
chr7 (11-175)||(13032046-13032210)
chr7 (74-176)||(9098283-9098385)
chr7 (13-106)||(13472555-13472649)
chr7 (20-150)||(16543003-16543133)
chr7 (20-150)||(16622529-16622659)
chr7 (13-150)||(15704475-15704612)
chr7 (83-200)||(19711059-19711176)
chr7 (111-203)||(19339324-19339416)
chr7 (65-150)||(16556666-16556751)
chr7 (65-150)||(16608911-16608996)
chr7 (111-200)||(1293025-1293114)
chr7 (111-203)||(27871710-27871803)
chr7 (59-203)||(8182922-8183066)
chr7 (111-202)||(21381502-21381594)
chr7 (1-183)||(2265485-2265665)
chr7 (111-203)||(24794788-24794881)
chr7 (111-187)||(14425455-14425531)
chr7 (111-203)||(48062894-48062986)
chr7 (111-187)||(48805953-48806029)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-203)||(32481-32683)
scaffold0084 (1-203)||(49328-49530)
scaffold0084 (94-187)||(351-444)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-203)||(1686-1888)
[»] chr6 (45 HSPs)
chr6 (3-202)||(20112652-20112852)
chr6 (1-203)||(32544261-32544463)
chr6 (1-201)||(9717841-9718041)
chr6 (1-203)||(26972179-26972379)
chr6 (1-187)||(13435544-13435730)
chr6 (1-203)||(15302196-15302398)
chr6 (1-199)||(23284564-23284762)
chr6 (1-203)||(12715370-12715573)
chr6 (4-203)||(15531578-15531777)
chr6 (1-203)||(13602168-13602370)
chr6 (11-200)||(15987232-15987422)
chr6 (4-203)||(24116824-24117024)
chr6 (1-187)||(14100391-14100577)
chr6 (1-203)||(18435552-18435754)
chr6 (17-203)||(18378310-18378496)
chr6 (1-187)||(29918029-29918214)
chr6 (1-203)||(19623975-19624177)
chr6 (1-186)||(21625114-21625298)
chr6 (1-203)||(19086154-19086346)
chr6 (12-176)||(19688789-19688953)
chr6 (16-203)||(16265116-16265303)
chr6 (16-187)||(22802153-22802324)
chr6 (17-183)||(20730671-20730837)
chr6 (15-186)||(10640384-10640555)
chr6 (1-169)||(34451619-34451787)
chr6 (112-203)||(25594064-25594155)
chr6 (33-187)||(26943588-26943741)
chr6 (18-186)||(19470683-19470850)
chr6 (1-120)||(25597558-25597677)
chr6 (13-200)||(15954702-15954889)
chr6 (13-187)||(20487880-20488055)
chr6 (1-203)||(22076360-22076560)
chr6 (13-187)||(21618256-21618430)
chr6 (1-187)||(16877225-16877409)
chr6 (1-203)||(16336123-16336323)
chr6 (1-187)||(19832985-19833170)
chr6 (95-187)||(21235137-21235229)
chr6 (1-187)||(12349005-12349188)
chr6 (31-187)||(12423273-12423428)
chr6 (111-203)||(19066079-19066171)
chr6 (16-63)||(21235249-21235296)
chr6 (91-203)||(33351968-33352079)
chr6 (122-203)||(17381517-17381598)
chr6 (132-203)||(26589595-26589667)
chr6 (108-152)||(20635758-20635802)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-200)||(19385-19584)
scaffold0035 (82-203)||(99201-99320)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-203)||(1656-1858)
[»] scaffold0290 (1 HSPs)
scaffold0290 (9-201)||(18542-18734)
[»] scaffold0161 (2 HSPs)
scaffold0161 (1-200)||(10020-10220)
scaffold0161 (132-200)||(14816-14884)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-200)||(15116-15315)
[»] scaffold0411 (1 HSPs)
scaffold0411 (9-203)||(12205-12399)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-203)||(377472-377674)
scaffold0004 (1-203)||(220234-220435)
scaffold0004 (22-187)||(244219-244383)
scaffold0004 (14-203)||(211394-211583)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-200)||(25888-26087)
scaffold0083 (36-166)||(44652-44782)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-203)||(9965-10167)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-203)||(22672-22874)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-200)||(474-673)
[»] scaffold0026 (3 HSPs)
scaffold0026 (4-203)||(60012-60211)
scaffold0026 (1-203)||(7922-8124)
scaffold0026 (11-48)||(151794-151831)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-187)||(212366-212553)
scaffold0005 (1-140)||(6111-6250)
[»] scaffold0116 (1 HSPs)
scaffold0116 (3-203)||(20886-21086)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-190)||(7712-7901)
[»] scaffold0120 (2 HSPs)
scaffold0120 (3-203)||(36690-36890)
scaffold0120 (3-203)||(42115-42315)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-203)||(5603-5805)
[»] scaffold0217 (3 HSPs)
scaffold0217 (9-203)||(19027-19221)
scaffold0217 (1-200)||(9559-9755)
scaffold0217 (13-203)||(22056-22246)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-203)||(27342-27544)
[»] scaffold0861 (1 HSPs)
scaffold0861 (4-181)||(4863-5040)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-140)||(30283-30422)
scaffold0047 (13-203)||(9899-10088)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-203)||(89970-90170)
[»] scaffold0426 (1 HSPs)
scaffold0426 (31-203)||(13567-13739)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-186)||(103585-103770)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-203)||(15789-15993)
[»] scaffold0334 (1 HSPs)
scaffold0334 (2-169)||(9825-9992)
[»] scaffold0007 (1 HSPs)
scaffold0007 (3-158)||(143129-143284)
[»] scaffold0324 (1 HSPs)
scaffold0324 (11-203)||(9952-10144)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-187)||(215412-215596)
[»] scaffold0364 (1 HSPs)
scaffold0364 (15-203)||(6003-6190)
[»] scaffold1434 (1 HSPs)
scaffold1434 (1-134)||(699-832)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-200)||(570-767)
scaffold1359 (111-187)||(1778-1854)
[»] scaffold0022 (5 HSPs)
scaffold0022 (1-136)||(39488-39623)
scaffold0022 (1-136)||(137548-137683)
scaffold0022 (11-203)||(159051-159242)
scaffold0022 (138-187)||(37414-37463)
scaffold0022 (138-187)||(135474-135523)
[»] scaffold0043 (1 HSPs)
scaffold0043 (14-203)||(78292-78481)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-187)||(6655-6839)
[»] scaffold0028 (1 HSPs)
scaffold0028 (15-203)||(5529-5717)
[»] scaffold1331 (1 HSPs)
scaffold1331 (1-203)||(1614-1814)
[»] scaffold0243 (1 HSPs)
scaffold0243 (3-83)||(4908-4988)
[»] scaffold0040 (1 HSPs)
scaffold0040 (18-186)||(1452-1619)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-200)||(60802-60999)
[»] scaffold0056 (3 HSPs)
scaffold0056 (18-185)||(36115-36281)
scaffold0056 (111-203)||(34827-34919)
scaffold0056 (111-200)||(25688-25777)
[»] scaffold0064 (1 HSPs)
scaffold0064 (11-187)||(43843-44018)
[»] scaffold0273 (1 HSPs)
scaffold0273 (65-190)||(5636-5760)
[»] scaffold0081 (1 HSPs)
scaffold0081 (18-187)||(40649-40817)
[»] scaffold0530 (1 HSPs)
scaffold0530 (120-175)||(2027-2082)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-83)||(5852-5935)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-186)||(9168-9350)
[»] scaffold0011 (3 HSPs)
scaffold0011 (94-187)||(164952-165045)
scaffold0011 (1-145)||(65344-65485)
scaffold0011 (1-145)||(144389-144530)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-203)||(3300-3500)
[»] scaffold0132 (1 HSPs)
scaffold0132 (94-187)||(38091-38184)
[»] scaffold0025 (2 HSPs)
scaffold0025 (98-203)||(74577-74682)
scaffold0025 (15-48)||(74718-74751)
[»] scaffold1747 (1 HSPs)
scaffold1747 (111-187)||(1329-1405)
[»] scaffold1745 (1 HSPs)
scaffold1745 (111-187)||(6-82)
[»] scaffold0414 (1 HSPs)
scaffold0414 (59-187)||(7127-7255)
[»] scaffold0220 (1 HSPs)
scaffold0220 (94-186)||(1803-1895)
[»] scaffold0527 (1 HSPs)
scaffold0527 (13-168)||(7963-8117)
[»] scaffold0247 (1 HSPs)
scaffold0247 (82-203)||(25393-25514)
[»] scaffold0387 (1 HSPs)
scaffold0387 (111-187)||(7393-7469)
[»] scaffold0280 (1 HSPs)
scaffold0280 (83-203)||(2726-2845)
[»] scaffold0045 (1 HSPs)
scaffold0045 (111-203)||(87623-87715)
[»] scaffold0352 (1 HSPs)
scaffold0352 (113-187)||(846-920)
[»] scaffold0211 (1 HSPs)
scaffold0211 (94-187)||(15628-15721)
[»] scaffold0249 (1 HSPs)
scaffold0249 (111-203)||(17788-17880)
[»] scaffold0908 (1 HSPs)
scaffold0908 (132-183)||(3939-3990)
[»] scaffold0078 (1 HSPs)
scaffold0078 (108-187)||(31805-31883)
[»] scaffold0069 (1 HSPs)
scaffold0069 (111-203)||(5347-5440)


Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 24850573 - 24850776
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24850573 aggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctacgcattgctgaagaccagaagagtgaagcaacgaatattttgaa 24850672  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24850673 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 24850772  T
Q  200 tgct 203  Q
    ||||    
T  24850773 tgct 24850776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 25829326 - 25829124
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  25829326 aggagatgcaagacttagagcttcaaaggatgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 25829227  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||| | |||||||||    
T  25829226 ggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcattttgtgtctct 25829127  T
Q  201 gct 203  Q
    |||    
T  25829126 gct 25829124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 30667181 - 30666979
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||| ||||||||||    
T  30667181 aggagatgcaagaattaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagaatgaagcaacgactattttgaaa 30667082  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  30667081 ggatttgaaggcattggatgcttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 30666982  T
Q  201 gct 203  Q
    |||    
T  30666981 gct 30666979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 13963889 - 13964088
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||  |||||||||||||||| ||||||||||| |    
T  13963889 agatgcaagatttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgtagaagactgaaagagtgaagcaacgactattttgaaagaa 13963988  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||||    
T  13963989 tttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 13964088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 23235197 - 23234997
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| |||||||||||     
T  23235197 gagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtaaagcaacgactattttgaaaga 23235098  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| || ||||||||||||| |||||||||||| ||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  23235097 atttgaaggcattggatgcttattctttgaagagtgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 23234998  T
Q  203 t 203  Q
    |    
T  23234997 t 23234997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 9015278 - 9015478
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||| |||| | ||||||||||    
T  9015278 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatcttgtctaagcattgcagaagactggaagagtgaaacaacaactattttgaaa 9015377  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||||||||  ||||||||||||| ||| |||||    
T  9015378 ggatttgaaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacg--gtgtacaaccactatctccactactcagtttgtatctct 9015475  T
Q  201 gct 203  Q
    |||    
T  9015476 gct 9015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 20568658 - 20568860
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||||||| |  |||||||||    
T  20568658 aggagatgcaagacttaaagctttaaaggctgttccatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaacaattttgaaa 20568757  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||   |||||||||||| ||||| |||    
T  20568758 ggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatccccactactcagtttgtgtatct 20568857  T
Q  201 gct 203  Q
    |||    
T  20568858 gct 20568860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21537156 - 21537358
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||| |||||||||||||||||| ||||||||||    
T  21537156 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtttaaacattgcagaagaccagaagagtgaagcaacgactattttgaaa 21537255  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    || |||  | |||||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||||||| |    
T  21537256 ggttttggaggcattggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtcttt 21537355  T
Q  201 gct 203  Q
    |||    
T  21537356 gct 21537358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 24377291 - 24377091
Alignment:
Q  3 gagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaag 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||| |||||| |||||||||||||||||| |||||||||||    
T  24377291 gagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatcacgccta-gcattgcagaagaccagaagagtgaagcaacgactattttgaaag 24377193  T
Q  102 gatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctg 201  Q
    | ||| | ||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||    
T  24377192 gttttgagagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctg 24377093  T
Q  202 ct 203  Q
    ||    
T  24377092 ct 24377091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 25037167 - 25037369
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||| ||||||| ||||||||| | ||||| || |||||||    
T  25037167 aggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatcttgtcgaagcattgcagaagactggaagagtgatgtaacgactaatttgaaa 25037266  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||| |||| |||||||||||||  ||||||||||||| |||||||||    
T  25037267 ggatttgaaagcattggatgtttgttctttgaaaagcgttgacaaagtacaattgttcgaagtgtacaaccactatctccactactcagtttgtgtctct 25037366  T
Q  201 gct 203  Q
    |||    
T  25037367 gct 25037369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 25041274 - 25041476
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||| ||||||| ||||||||| | ||||| || |||||||    
T  25041274 aggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatcttgtcgaagcattgcagaagactggaagagtgatgtaacgactaatttgaaa 25041373  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||| |||| |||||||||||||  ||||||||||||| |||||||||    
T  25041374 ggatttgaaagcattggatgtttgttctttgaaaagcgttgacaaagtacaattgttcgaagtgtacaaccactatctccactactcagtttgtgtctct 25041473  T
Q  201 gct 203  Q
    |||    
T  25041474 gct 25041476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 30621408 - 30621210
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||| ||| ||||||||||    
T  30621408 aggagatgcaagaattaaaggttcaaaggttgttcaatggatttaatctcgtgtaagcattgcagaagactggaagagtgaagcagcgactattttgaaa 30621309  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    |||||| || |||||||||| ||| ||||||||||||||||||||||||||| |||||||| |||| ||||||||  ||||||||||||| ||||||||    
T  30621308 ggatttgaaggcattggatgtttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactcagtttgtgtctc 30621210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 30624029 - 30623831
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||| ||| ||||||||||    
T  30624029 aggagatgcaagaattaaaggttcaaaggttgttcaatggatttaatctcgtgtaagcattgcagaagactggaagagtgaagcagcgactattttgaaa 30623930  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    |||||| || |||||||||| ||| ||||||||||||||||||||||||||| |||||||| |||| ||||||||  ||||||||||||| ||||||||    
T  30623929 ggatttgaaggcattggatgtttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactcagtttgtgtctc 30623831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 18376824 - 18377016
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| |  || |||||| |||| | |||||||||||||||| ||     
T  18376824 agacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagattttaatagtgaatcaactactattttgaaaggatttgaag 18376923  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||||    
T  18376924 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 18377016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 19540606 - 19540406
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||  ||||| ||||||    
T  19540606 gagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcatctaagcattgcagaagactaggagagtgaagcaacggctatttcgaaagg 19540507  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
     ||| || | |||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  19540506 ttttgaaggtattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 19540407  T
Q  203 t 203  Q
    |    
T  19540406 t 19540406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 10009657 - 10009860
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagacta-gaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||| | |||||||  ||||| | || |||||||||||| | |||||||||    
T  10009657 aggagatgcaagacttaaagcttcaagggctgttcaatggattcaatctcgtccaagcattgcaaaagaccaagaggagtgaagcaacaactattttgaa 10009756  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||    
T  10009757 aggatttgaaagcattggatgcttgttctttgaagaacgttgacatagtacaattgtacgaaatgtacaaccactatctccactactcagtttgtgtctc 10009856  T
Q  200 tgct 203  Q
    ||||    
T  10009857 tgct 10009860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22188010 - 22188212
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||  |||||||||||||| | |||||||||     
T  22188010 aggacatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagtattgcagaagactgaaagagtgaagcaacaactattttgaat 22188109  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
     ||||| || |||||||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  22188110 agatttgaaggcattggatgcttgttctttgaagagcgttaacaaagtataattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 22188209  T
Q  201 gct 203  Q
    |||    
T  22188210 gct 22188212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 24576228 - 24576025
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaa-tctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||| ||| ||||||||||| | |||||||||    
T  24576228 aggagatgcaatacttaaagcttcaaaggttgttcaatggatttaaatctcatctaagcattgcagaagactggaaaagtgaagcaacaactattttgaa 24576129  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||| || ||||||| || |||||| |||||||| ||||||||||||||| |||||||| |||||||||||||| ||||||||| ||| ||||||||    
T  24576128 aggatttaaaggcattggttgtttgttcgttgaagagagttgacaaagtacaattgtacgaagtgtacaaccactacctccactacttagtttgtgtctc 24576029  T
Q  200 tgct 203  Q
    ||||    
T  24576028 tgct 24576025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 22317784 - 22317583
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatatttt-gaaag 101  Q
    ||||||||||||||||||||||||||| | |||| ||||||||||||| |||| |||||||  |||||||||||||||||||||||| |||||| |||||    
T  22317784 gagatgcaagacttaaagcttcaaaggcttttcattggatttaatctcatctaagcattgcataagactagaagagtgaagcaacgactatttttgaaag 22317685  T
Q  102 gatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctg 201  Q
    ||||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||| | |||||||||||| ||||||| ||||| | | ||||||    
T  22317684 gatttaaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtatacaaccactacctccactattcagtttttatctctg 22317585  T
Q  202 ct 203  Q
    ||    
T  22317584 ct 22317583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 38781587 - 38781405
Alignment:
Q  5 gatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggat 104  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  || ||  ||||||| ||| ||||||||||| | ||||||||||||||    
T  38781587 gatgcaagacttaaagcttcaaaggttgttcaattgatttaatctcgtctaaacaatgtagaagactggaaaagtgaagcaacaactattttgaaaggat 38781488  T
Q  105 ttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    || || |||||| ||| ||||||||  ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  38781487 ttgaaggcattgaatgattgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacatccactactc 38781405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 20151944 - 20152118
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||  || |||||||    
T  20151944 aggagatgcaaca-ttaaagcttcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacggttagtttgaaa 20152042  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactac 176  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||    
T  20152043 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactac 20152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 203
Target Start/End: Original strand, 28140528 - 28140729
Alignment:
Q  2 ggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaag 101  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||  ||||  |   |||||||||||| | |||||||||||    
T  28140528 ggagatgcaagacttaaaacttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagatcattggagtgaagcaacaactattttgaaag 28140627  T
Q  102 gatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctg 201  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||| | |||||  ||||||||||||| ||||||||||    
T  28140628 gatttgaaaacattggatgcttgttctttgaagagcgttgacatagtacaattgtacaaagtgtaccatcactatctccactactcagtttgtgtctctg 28140727  T
Q  202 ct 203  Q
    ||    
T  28140728 ct 28140729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 24779525 - 24779333
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    |||||| |||||||||||||||||||||||||| ||||||||| | ||||||   ||||| ||| |||||||||||||| |||||||||||||||| |||    
T  24779525 agacttgaagcttcaaaggttgttcaatggattcaatctcgtccaagcattgaaaaagaccagaggagtgaagcaacgactattttgaaaggatttgaaa 24779426  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||| ||||| ||||||||||||||| ||||||| ||||||| |||| ||| |||| ||||||||  ||||||||||||| ||||||||||||    
T  24779425 gcatcggatgtttgttctttgaagagtgttgacatagtacaattgtatgaagtgtataaccactatctccactactcagtttgtgtctctgct 24779333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 22260598 - 22260432
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||| ||||||||| ||    
T  22260598 aggagatgcaagacttaaagcgtcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacaaatattttggaa 22260499  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtac 167  Q
    |||||| || | | ||||||||||||||||||||||| |||||| ||||||| |||| ||| |||||    
T  22260498 ggatttgaaggaactggatgcttgttctttgaagagctttgacatagtacaattgtaagaagtgtac 22260432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 33 - 203
Target Start/End: Complemental strand, 40782637 - 40782467
Alignment:
Q  33 ttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttga 132  Q
    ||||||||||| ||||||||| | |||||||  ||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  40782637 ttcaatggattcaatctcgtccaagcattgcaaaagaccagaggagtgaagcaacgactattttgaaaggatttgaaagcattggatgtttgttctttga 40782538  T
Q  133 agagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||| ||||||| |||||||| |||||||||||||  |||| |||| ||| ||||||||||||    
T  40782537 agagcgttgacatagtacaattgtacgaagtgtacaaccactatctccaatacttagtttgtgtctctgct 40782467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 6574045 - 6574218
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctac-gcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||| ||| ||||||||||||| || ||||||||||||| || ||||    
T  6574045 taaagcttcaaaggttgttcaattgatttaatctcgtctaatgcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcat 6574144  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtac-aagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| ||||||||  ||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||    
T  6574145 tggatgtttgttcttcaaagagcgttgacaaagtacaaattgtacgaagtgtacaaccactacctccactactc 6574218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 39037560 - 39037752
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||| ||||||| ||||| ||| | ||||||||||||  || ||  || | | || ||     
T  39037560 agacttaaaacttcaaaggttgttcattggatttgatctcgtctaagcattgcagaagattaggaaagtgaagcaacggctaattcaaatgaagttgaag 39037659  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||| |||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  39037660 gcattagatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcagtttgtgtctctgct 39037752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 25189579 - 25189391
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    |||||||||||||||||||||||||||||||||||||| |  ||| ||||||| |||||| || |||||||||||| || || ||  || | | || ||     
T  25189579 agacttaaagcttcaaaggttgttcaatggatttaatcacaccta-gcattgcagaagaccaggagagtgaagcaatgactaattcaaatgaagttgaag 25189481  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||||||||| |||| | ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||||||    
T  25189480 gcattggattcttgctttttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactacctccactactcaatttgtgtctct 25189391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 23595481 - 23595677
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||||||||||||||||| || ||  || | |    
T  23595481 agatgaaagaattaaagcttcaaaggttgttcaaaggatttaatcacaccta-gcattgcagaagaccagaagagtgaagcaacgactaattcaaatgaa 23595579  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| || ||||||||| |||||||| |||||  |||||||||||||||| |||||||| |||| ||||||||| ||| ||||||||| ||||||||||||    
T  23595580 tttgaaggcattggattcttgttctctgaag--cgttgacaaagtacaattgtacgaagtgtagaaccactacctcctctactcagtttgtgtctctgct 23595677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 41121642 - 41121829
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    ||||||||||||||| ||||||| |||||||||| || ||| ||||||| ||||| | || ||||||||||| || || ||  ||||||||| || ||||    
T  41121642 ttaaagcttcaaaggctgttcaaaggatttaatcacgccta-gcattgcagaagattggatgagtgaagcaaagactaattcaaaaggatttgaaggcat 41121740  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||  ||| |||||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||||| || ||||||||||||    
T  41121741 tggattattgctctttgaagagcattgacaaagtacaattgtgcgaaatgtacaaccactacctccactactctgtttgtgtctctgct 41121829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 22454908 - 22455100
Alignment:
Q  11 agacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaa 109  Q
    ||||||||||||||||| || |||||||||||||||||| || | |  |||||| |||||| ||||||||||||||||   || ||  || | | || ||    
T  22454908 agacttaaagcttcaaaagggtgttcaatggatttaatcacgcccaa-cattgcagaagaccagaagagtgaagcaacagttaattcaaatgaagttgaa 22455006  T
Q  110 agcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
     |||||||||||||| | |||||| |||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||| ||||||||||||    
T  22455007 ggcattggatgcttgctttttgaaaagcgttgacaaagtacaattgtacgaagtgtacaaccagtacctccactactcagtttgtgtctctgct 22455100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 31800807 - 31800997
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| | || | | |||||  || ||||||||   ||||| ||||||| ||| |||||| |||| | |||||||||||||||| |||||    
T  31800807 acttaaagcttcaaaagctgcttagtggatccaaactcgtctatttattgcagaagactggaaaagtgaaacaacaactattttgaaaggatttgaaagc 31800906  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||| ||| ||||  ||||||||||||||||||||  |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  31800907 attggatgtttgatcttcaaagagcgttgacaaagtacatttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 31800997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 28711618 - 28711808
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||| |||||||| | |||| |||||||| || || |||||   ||||| ||||||| ||| ||| ||||||||| ||||| ||| | |||| || ||    
T  28711618 acttaaggcttcaaaagctgtttaatggattcaaccttgtctaaagattgcagaagactggaaaagtaaagcaacgactatttcgaatgaatttgaaggc 28711717  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||  ||||||||||| |||||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  28711718 attggatgcttgttcttcaaagagcgttgaaaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 28711808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 45087102 - 45087267
Alignment:
Q  13 acttaaagcttcaaag-gttgttcaatgg-atttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    |||||||||||||||  |||||| ||||| ||| || |||||||| | ||||| ||||||| ||| ||||||||||||| |||||||||||||||| ||     
T  45087102 acttaaagcttcaaaaagttgtttaatgggattcaacctcgtctaaggattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaat 45087201  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactac 176  Q
    ||||| ||||||| ||||   |||||||||||||||||||   |||||||| ||||||||||||||    
T  45087202 gcattagatgcttattctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactac 45087267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 6392814 - 6392639
Alignment:
Q  14 cttaaagcttcaaaggttgttcaatg-gatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||| |||||||| | |||| |||| |||| || |||||||| | ||||| ||||||| ||| ||||||||||||| |||||||||||||||| || ||    
T  6392814 cttaaggcttcaaaagctgtttaatgtgattcaacctcgtctaaggattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgc 6392715  T
Q  113 attggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||| ||   |||||||||||||||||||   |||||||| ||  |||||||||| ||||||||||    
T  6392714 attggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgcgcaaccactacctccactactc 6392639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 26619027 - 26619195
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||||||||||||  ||||||||| || |||  |||||| ||||||| ||||| ||||||||| | |||||  |||| |||| || ||||||     
T  26619027 aagcttcaaaggttgttcaaatgatttaatcacgcctat-cattgcagaagactggaagaatgaagcaacaactatttcaaaagaatttgaaggcattga 26619125  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| ||||||| ||| |||||| |||| |||| |||||||| |||||||||||||  ||||||||||    
T  26619126 atgcttattctttggagaacgttgaaaaaggacaattgtacgaagtgtacaaccactatctccactactc 26619195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 31327875 - 31328060
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaag-gttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||  ||||||| ||||||  ||||||||| ||||| || |||| |||   ||||| ||||||||||  ||||||||||||| ||||||| |    
T  31327875 aggagatgcaa--cttaaagtttcaaaaagttgttcaacggattcaaactcgcctaaagattgcagaagactagagaagtgaagcaacgactattttgga 31327972  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     || ||| ||||||||||||||||||||||  ||||||||||||||||||     | ||||| |||||||||||||| ||||||||||    
T  31327973 gggttttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtatgttcgaacgaagtgtacaaccactacctccactactc 31328060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 31334596 - 31334781
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaag-gttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||  ||||||| ||||||  ||||||||| ||||| || |||| |||   ||||| ||||||||||  ||||||||||||| ||||||| |    
T  31334596 aggagatgcaa--cttaaagtttcaaaaagttgttcaacggattcaaactcgcctaaagattgcagaagactagagaagtgaagcaacgactattttgga 31334693  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     || ||| ||||||||||||||||||||||  ||||||||||||||||||     | ||||| |||||||||||||| ||||||||||    
T  31334694 gggttttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtatgttcgaacgaagtgtacaaccactacctccactactc 31334781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 28701149 - 28701322
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||| |||||||| | |||| ||| |||| || |||||||    ||||| ||||||| ||| ||| |||||||  ||||||||||||||||| || ||    
T  28701149 acttaaggcttcaaaagctgtttaatagattcaacctcgtcttaagattgcagaagactggaaaagtaaagcaacagatattttgaaaggatttgaaggc 28701248  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    |||||||||||||||||  ||| ||||||||||||||    |||||||| |||||||||| ||| |||||||||    
T  28701249 attggatgcttgttcttcaaagggcgttgacaaagtaagtttgtacgaagtgtacaaccattacctccactact 28701322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 22802650 - 22802466
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  ||||||| |||||| | | || |||||||| || ||||||||   ||||| |||||||||||  || |||||| |  ||||||||||    
T  22802650 aggagatgcaa--cttaaagattcaaaagctatttaatggattcaaactcgtctaaagattgcagaagactagaaaggtaaagcaatggctattttgaaa 22802553  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || ||||  ||||||| |||||  ||||| |||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  22802552 ggatttgaaggcatatgatgcttattcttcaaagagagttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 22802466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 30557239 - 30557415
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatgg-atttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaag 111  Q
    |||||| ||||||||  ||||| ||||| ||| || |||||||| | ||||| || ||||  || ||||||||| ||| ||||||||||| |||| ||      
T  30557239 acttaaggcttcaaaaattgtttaatgggattcaacctcgtctaaggattgcagaggactgaaaaagtgaagcatcgactattttgaaagaatttgaaca 30557338  T
Q  112 cattggatgcttgttctttgaa-gagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||||| |  || |||||||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  30557339 cattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 30557415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 82 - 203
Target Start/End: Original strand, 35743989 - 35744110
Alignment:
Q  82 agcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatcca 181  Q
    |||||||| ||||||| |||||||| || |||||| |||||  |||||  ||||||||||||| |||||   ||||||||||||||||| ||||  ||||    
T  35743989 agcaacgactattttggaaggatttgaaggcattgaatgctaattcttcaaagagcgttgacatagtacgtttgtacgaaatgtacaactactatctcca 35744088  T
Q  182 ctactcagtgtgtgtctctgct 203  Q
    ||||||||| | ||||||||||    
T  35744089 ctactcagtttttgtctctgct 35744110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 7609154 - 7609039
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaaga-ctagaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||| | ||||| |  |||| | ||| ||||||||||||   |||||||||    
T  7609154 aggagatgcaagacttaaagcttcaagggctgttcaatggattcaatctcgtccaagcattacaaaagaccaagaggagtgaagcaacacctattttgaa 7609055  T
Q  100 aggatttcaaagcatt 115  Q
    ||||||| || |||||    
T  7609054 aggatttgaaggcatt 7609039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 23184236 - 23184414
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    |||||||||||||||||||| ||||| |||| |  ||| |||| || |||||| |||||||||||||| ||| || ||  || | |||| || |||||||    
T  23184236 aagcttcaaaggttgttcaaaggatt-aatcacaccta-gcat-gcagaagaccagaagagtgaagca-cgactaattcaaatgaatttgaaggcattgg 23184331  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    || || ||||| |||||  |||||||||||||||| |||||||| |||| ||||||||| ||| ||||||||| ||||||||||||    
T  23184332 attct-gttctctgaag--cgttgacaaagtacaattgtacgaagtgtagaaccactacctcctctactcagtttgtgtctctgct 23184414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 34321846 - 34322018
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||| ||||| | |||| || ||||| || ||||||||   ||||| |||| || ||| |||  |||||||| ||||||||||    
T  34321846 aggagatgcaa--cttaaagcctcaaaagctgtttaaaggattcaaactcgtctaaagattgcagaagcctggaaaagtatagcaacgactattttgaaa 34321943  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccacta 175  Q
    |||||  || ||||||||| ||| |||||  ||||||||||||| |||||   |||| ||| |||||||||||||    
T  34321944 ggattgaaaggcattggattcttattcttcaaagagcgttgacatagtacgtttgtatgaagtgtacaaccacta 34322018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 18430858 - 18431034
Alignment:
Q  10 aagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaa 109  Q
    |||| |||||||||||||||||||||||  | ||||||| || |||  |||||| ||||||||||||  ||||||||||  || ||  |||| |||| ||    
T  18430858 aagaattaaagcttcaaaggttgttcaaatgttttaatcacgccta-tcattgcagaagactagaagcatgaagcaacggctaattcaaaagaatttgaa 18430956  T
Q  110 agcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     |||||| |||||| ||||||| | | |||||  |||  ||||  ||||||| ||||||||||| || ||||||||||    
T  18430957 ggcattgaatgcttattctttggaaaacgttggaaaacgacaatagtacgaagtgtacaaccacgacctccactactc 18431034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 19115257 - 19115089
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    |||||||||||||||||||| | ||||||||||| ||||  ||||| ||||||| ||||| ||||||||| | || ||   | |||| | ||  || |||    
T  19115257 aagcttcaaaggttgttcaaagaatttaatctcgcctac-tattgcagaagactggaagaatgaagcaacaactaattcagatggatgtgaagccagtgg 19115159  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||| | ||| ||| |||| ||||| |||| |||| |||||||| |||||||||||||  ||||||||||    
T  19115158 atgcctattcgttggagagtgttgaaaaaggacaattgtacgaagtgtacaaccactatctccactactc 19115089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 186
Target Start/End: Complemental strand, 22272303 - 22272139
Alignment:
Q  22 ttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgc 121  Q
    ||||||||||||||||  ||||||||| ||||||  |||||| ||||||| ||||| |||||||| || || ||  || |||||| || |||||||||||    
T  22272303 ttcaaaggttgttcaaatgatttaatcacgtctat-cattgcagaagactggaagaatgaagcaatgactaattcaaatggatttgaaggcattggatgc 22272205  T
Q  122 -ttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
     || ||| ||| |||| ||||| |||| | || |||| ||| |||||||||||||  |||||||||    
T  22272204 ttttttcgttggagagagttgaaaaaggaaaattgtaagaagtgtacaaccactatctccactact 22272139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 28550936 - 28551028
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  28550936 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 28551028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 44840516 - 44840424
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  44840516 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 44840424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 33074416 - 33074216
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||| ||||||| | |||| || ||||| || ||||||||   ||||| ||||||| ||| |||  |||||||| ||||||| |     
T  33074416 aggagatgcaa--cttaaaacttcaaaagctgtttaaaggattcaaactcgtctaaagattgcagaagactggaaaagtatagcaacgactattttggac 33074319  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
     ||||  || ||||| ||||||| |||||  || | |||||||| | ||| | |||||||| |||||||||||||  |||||||||| || | |||||||    
T  33074318 agattggaaggcattagatgcttattcttcaaaaaacgttgacataatacgattgtacgaagtgtacaaccactatctccactactctgtttttgtctct 33074219  T
Q  201 gct 203  Q
    |||    
T  33074218 gct 33074216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 22776306 - 22776398
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||| ||||| || | ||||||||||    
T  22776306 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccagtactctgtttttgtctctgct 22776398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 22781684 - 22781776
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||| ||||| || | ||||||||||    
T  22781684 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccagtactctgtttttgtctctgct 22781776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 31968061 - 31968153
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| | |||   |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  31968061 gcattggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 31968153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 40332169 - 40332077
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||| ||||| || | ||||||||||    
T  40332169 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactaactccattactctgtttttgtctctgct 40332077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 44881341 - 44881173
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    |||||||||||| |||||||  || |||||| ||||||  |||||| ||||||| ||||| ||||||| |   || ||  || || ||| || |||||||    
T  44881341 aagcttcaaaggctgttcaaatgacttaatcacgtctat-cattgcagaagactggaagaatgaagcagcagctaattcaaatgggtttgaaggcattgg 44881243  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||| || ||  ||| |||| ||||| |||| |||| |||||||| |||||||||||||  ||||||||||    
T  44881242 atgtttttttgttggagagagttgaaaaaggacaattgtacgaagtgtacaaccactatctccactactc 44881173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 1587051 - 1587127
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||  |||||  ||||||||||||| |||||   |||||||| |||||||||||||  ||||||||||    
T  1587051 gcattggatgctaattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 1587127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 14581597 - 14581533
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccacta 175  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||    
T  14581597 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 14581533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 3277112 - 3277037
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    ||||||||||||| |||||  ||||||||||| | |||||   |||||||| |||||||||||||  |||||||||    
T  3277112 gcattggatgcttattcttcaaagagcgttgatatagtacgtttgtacgaagtgtacaaccactatctccactact 3277037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 23392707 - 23392762
Alignment:
Q  132 aagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||  ||||||| |||||||| |||||||||||||| |||| |||||    
T  23392707 aagagcgttgacctagtacaactgtacgaagtgtacaaccactacttccattactc 23392762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 18702912 - 18702744
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||||||||||||  | ||||||| ||||||  |||| | ||||||||||||  ||||| ||||  || ||  |||| |||| || ||||| |    
T  18702912 aagcttcaaaggttgttcaaatgttttaatcacgtcta-tcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 18702814  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||  |||||| ||| |||||  |||| |||| |||||||| | | |||| ||||  ||||||||||    
T  18702813 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtatgcaacaactatctccactactc 18702744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 22258232 - 22258191
Alignment:
Q  162 atgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||  ||||||||||||| ||||||||||||    
T  22258232 atgtacaaccactatctccactactcagtttgtgtctctgct 22258191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 22785673 - 22785749
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| |||||  ||||||||||||| |||||   ||||| || |||| ||||||||  ||||||||||    
T  22785673 gcattggatgcttattcttcaaagagcgttgacatagtacttttgtacaaagtgtataaccactatctccactactc 22785749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 39693725 - 39693523
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||| || ||||||||||    
T  39693725 aggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatctcgtctaagcattgcagaagactggaagagtgaagcaatgactattttgaaa 39693626  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  39693625 ggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 39693526  T
Q  201 gct 203  Q
    |||    
T  39693525 gct 39693523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 19156384 - 19156184
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| || |||||||||    
T  19156384 gagatgcaagaattaaagcttcaaaggctgttcaatggatttaatctcgtctatgcattgcagaagactagaagagtgaagcaacgactaatttgaaagg 19156285  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  19156284 atttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactatctccactactcagtttgtgtctctgc 19156185  T
Q  203 t 203  Q
    |    
T  19156184 t 19156184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 602681 - 602883
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||| |||||||||||||| |||||||||||||||| |||||| ||||||||||| ||||||| ||||||| |||||||||||||| || ||||||||||    
T  602681 aggaaatgcaagacttaaaacttcaaaggttgttcattggattcaatctcgtctaagcattgcagaagacttgaagagtgaagcaatgactattttgaaa 602780  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  602781 ggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 602880  T
Q  201 gct 203  Q
    |||    
T  602881 gct 602883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 33083047 - 33082872
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||||||||| ||||||||||    
T  33083047 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagatcagaagagtgaagcaacgactattttgaaa 33082948  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactac 176  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  33082947 ggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactac 33082872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12757724 - 12757923
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||| | ||||||||||    
T  12757724 aggagatgcaagacttaaaactttaaaggatgttcaatggatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaacaactattttgaaa 12757823  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  12757824 ggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 12757923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16189174 - 16188972
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |||||| ||||||| ||||||||||||||||| ||||||||||    
T  16189174 aggagatgcaagacttaaagcttcaaaggttgtttaatggatttaatctcgtccaaccattgcagaagactggaagagtgaagcaacgactattttgaaa 16189075  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
     ||||| || ||||||||||||| |||||  ||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  16189074 tgatttgaaggcattggatgcttattcttctaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtatgtgtctct 16188975  T
Q  201 gct 203  Q
    |||    
T  16188974 gct 16188972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16207496 - 16207294
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||| | ||||||||||    
T  16207496 aggagatgcaagacttaaagcttcaaacgctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtaaagcaactactattttgaaa 16207397  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| || | |||||||    
T  16207396 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctct 16207297  T
Q  201 gct 203  Q
    |||    
T  16207296 gct 16207294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 16681264 - 16681466
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||  || |||||||    
T  16681264 aggagatgcaagacttagagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgtctagtttgaaa 16681363  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||| |||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  || | |||||||| |||||||||    
T  16681364 ggatttgaaggcattagatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctagtactcagtttgtgtctct 16681463  T
Q  201 gct 203  Q
    |||    
T  16681464 gct 16681466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21933073 - 21932871
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||  ||||||||| |||||  ||||||||||    
T  21933073 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcataagactgaaagagtgaaacaacggctattttgaaa 21932974  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||| ||||||||| ||  |||||||||||||||||| || |||||||| |||||||||||||| ||||||||||||||| |||||||    
T  21932973 ggatttaaaggcattgtatgcttgtttttcaaagagcgttgacaaagtaaaattgtacgaagtgtacaaccactacctccactactcagtgtttgtctct 21932874  T
Q  201 gct 203  Q
    |||    
T  21932873 gct 21932871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17525689 - 17525889
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||| ||| ||| ||||||| |||||||||| |||| | |||||||||    
T  17525689 aggagatgcaagacttaaatcttcaaaaggttgttcaatggatttaatatcgtctaagcactgcagaagactggaagagtgaaacaacaactattttgaa 17525788  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||  | ||||||||||| ||||||||    
T  17525789 aggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatcttcactactcagtttgtgtctc 17525888  T
Q  200 t 200  Q
    |    
T  17525889 t 17525889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17914649 - 17914447
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||| | ||||||||||    
T  17914649 aggagttgcaagagttaaagcttcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagactgtaagagtgaagcaacaactattttgaaa 17914550  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||  ||||||||||| | ||| |||||    
T  17914549 ggatttgaaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactatctccactactcaatttgtttctct 17914450  T
Q  201 gct 203  Q
    |||    
T  17914449 gct 17914447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 29693505 - 29693303
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||| |||||  |||| |||| ||||||||||||||| ||||||| |||||||  |||||||||||||| | ||||||||||    
T  29693505 aggagatgcaagacttaaagctccaaagactgtttaatgaatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaaccactattttgaaa 29693406  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||| ||  ||||||||||||| |||||||||    
T  29693405 ggatttgaaagcattgtatgcttgttctttgaagagctttgacaaagtacaattgtacgaagtgtacaaccattatctccactactcagtttgtgtctct 29693306  T
Q  201 gct 203  Q
    |||    
T  29693305 gct 29693303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 24646526 - 24646326
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||  ||||||| ||||||| ||||||   ||||||||||||    
T  24646526 gagatgcaagagttaaagcttcaaaggttgttcaattgatttaatctcgtctaagcattgcataagactaaaagagtgtagcaacagctattttgaaagg 24646427  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    ||||  | ||||||||||||| |||||||||||| ||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  24646426 atttgcaggcattggatgcttattctttgaagagtgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 24646327  T
Q  203 t 203  Q
    |    
T  24646326 t 24646326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17441769 - 17441967
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||| ||||||| ||||| | ||||||||| ||||||||||    
T  17441769 aggagatgcaagacttaaagctttaaaggttgttcaatggacttaatctcctctaagcattgcagaagactggaagactaaagcaacgactattttgaaa 17441868  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||||||  ||||||||||||||| |||||||||||||||||||||||||||| ||||| || |||||||||||||  ||||||||||| | |||||||||    
T  17441869 ggattt-gaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtactaagtgtacaaccactatctccactactcattttgtgtctct 17441967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 18321120 - 18321319
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||   |||| | ||||||||||||||   |||||| |||    
T  18321120 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcatgagaccaaaagagtgaagcaacagctattttcaaa 18321219  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| |  |||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| ||  ||||||||||||| |||||||||    
T  18321220 ggatttgagggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccattatctccactactcagtttgtgtctct 18321319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 18680002 - 18679803
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||| |||||||||||| ||||| |||||| ||||||||||| |||||||  ||||| ||| |||| ||||||||| |||||||| ||||    
T  18680002 agatgcaagacttagagcttcaaaggtagttcagtggattcaatctcgtctaagcattgcaaaagaccagaggagtaaagcaacgactattttgatagga 18679903  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  || |||||||||| ||||||||||||    
T  18679902 tttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctactactcagtttgtgtctctgct 18679803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 18719188 - 18718989
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||| ||||||||||| |||||| |||||| ||||||||  | |||||||  ||||| ||| |||||||||||||| |||||||| ||||    
T  18719188 agatgcaagacttagagcttcaaaggctgttcagtggattcaatctcgttcaagcattgcaaaagaccagaggagtgaagcaacgactattttgatagga 18719089  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| |||||||||||||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||||    
T  18719088 tttgaaagcattggatgcttgttctttgaagagcgttgtcatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 18718989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 23185202 - 23185389
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||| || ||||||||||||| || |||||    
T  23185202 taaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcatt 23185301  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||| |||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||| ||| || | ||||||||||    
T  23185302 ggatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactgctctgtttttgtctctgct 23185389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20382355 - 20382556
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||||||||| | |||||||  ||||||||| |||||||||||||  |||| |||||    
T  20382355 aggagatgcaagtcttaaagcttcaaaggctgttcaatggattcaatctcgtccatgcattgcaaaagactagaggagtgaagcaacggctattctgaaa 20382454  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| |||| | |||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||| ||||| |||||||||    
T  20382455 ggatttgaaagtagtggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactaatcagtttgtgtctct 20382554  T
Q  201 gc 202  Q
    ||    
T  20382555 gc 20382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 17701925 - 17701733
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||  |||||||||||||||| | |||||||||||||||| ||     
T  17701925 agacttaaagcttcaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagatcagaagagtgaagcaacaactattttgaaaggatttgaag 17701826  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||  ||| || |||||||||| ||||||| || |||||||| | |||||||||||| ||||||||||||| ||||||||||||    
T  17701825 gcattggatgctaattcctttaagagcgttggcaaagtataattgtacgaagtttacaaccactacctccactactcagtttgtgtctctgct 17701733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 19943427 - 19943239
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||||||| || | ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| | |||||||||    
T  19943427 aggagatgcaagacttaaagcttcaaaaggctattcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaa 19943328  T
Q  100 aggatttcaaagcattggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||| || |||||||||||||||| |||| || ||||||||||||||| || |||||||| |||||||||||||| ||||||||||    
T  19943327 aggatttgaaggcattggatgcttgttcctttaaaaagcgttgacaaagtaaaattgtacgaagtgtacaaccactacctccactactc 19943239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18121070 - 18121269
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||   ||||||||||    
T  18121070 aggagatgcaagacttaaagtttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactagaagagtgaagcaactgctattttgaaa 18121169  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  |||||| || ||||||||||| |||||||| |||   |||||||| || ||||||| || | |||||||    
T  18121170 ggatttaaaggcattggatgcttgttcttcaaagagcattaacaaagtacaattgtacgaagtgt---accactacctcaactactctgtttctgtctct 18121266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 17267661 - 17267463
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||  |||||   | ||||||||||||   ||||||||||||    
T  17267661 gagatgcaagacttaaagcttcaaaggttgttcaatgg-ttcaatctcgtccaagcattgcaaaagaccgcaggagtgaagcaacagctattttgaaagg 17267563  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||| |||||||||||||  ||||||||||||| | |||||||||    
T  17267562 atttgaaagcattagatgcttgttctttgaagagcattgacatagtacaattgtacgaattgtacaaccactatctccactactcagtttttgtctctgc 17267463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 23263572 - 23263757
Alignment:
Q  1 aggagatgcaagacttaa-agcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||| |||||| | |||||||||||||||||| ||||||||||||||||  || ||| |||||||||||||||||| ||| || |||||||||    
T  23263572 aggagatgcaaaacttaagaacttcaaaggttgttcaatagatttaatctcgtctaaacaatgcagaagactagaagagtgaaacaatgactattttgaa 23263671  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactac 185  Q
    ||||||| || |||||||||| ||||||||  ||||||||||||||||||||  |||||||| |||||||||||||| ||||||||    
T  23263672 aggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacagttgtacgaagtgtacaaccactacctccactac 23263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 30421404 - 30421591
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||| || |||||| |||||| || |||||    
T  30421404 taaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactagtttgaatggatttgaaggcatt 30421503  T
Q  116 ggatgcttgttcttt--gaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||||||||||||||   ||||||||||||||||||| | |||||||| | |||||||||||| |||||||||| || | |||||||||    
T  30421504 ggatgcttgttcttttcaaagagcgttgacaaagtac-attgtacgaagtttacaaccactacctccactactctgtttttgtctctgc 30421591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17797610 - 17797410
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||| ||||| ||||||||||||||| |||||||||||  |||| | ||||||| ||| ||||| ||||||  || |||||||    
T  17797610 aggagatgcaa--cttaaagcctcaaaagttgttcaatggattcaatctcgtctaaccattacagaagactggaaaagtgatgcaacggctagtttgaaa 17797513  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||| || || |||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  17797512 ggaattgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 17797413  T
Q  201 gct 203  Q
    |||    
T  17797412 gct 17797410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 20255529 - 20255660
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| | ||||||| ||| ||||||||||||| |||||||||||||    
T  20255529 agatgcaagacttaaagcgtcaaaggctgttcaatggatttaatctcgtctaagcattacagaagactggaaaagtgaagcaacgactattttgaaagga 20255628  T
Q  104 tttcaaagcattggatgcttgttctttgaaga 135  Q
    ||| || |||||||||||||||||||||||||    
T  20255629 tttgaaggcattggatgcttgttctttgaaga 20255660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 43645069 - 43644884
Alignment:
Q  17 aaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattg 116  Q
    |||||||||||||||||||||  ||||||||| || ||| ||||||| |||||| |||||||||||| ||||  || ||  || | |||| || ||||||    
T  43645069 aaagcttcaaaggttgttcaaatgatttaatcacgccta-gcattgcagaagaccagaagagtgaagaaacggctaattcaaatgaatttgaaggcattg 43644971  T
Q  117 gatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||| |||||||||| || ||||||||||||    
T  43644970 gatgcttgttctttgaagagcgttaataaagtacaattgtacgaagtgtacaaccactacctccactactcggtttgtgtctctgct 43644884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 45538412 - 45538602
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||| |||||||| |||||| |||||||| || ||||||||   ||||| ||||||| ||| ||||||||||| | |||||||||||||||| ||  |    
T  45538412 acttaaggcttcaaaagttgtttaatggattcaacctcgtctaaagattgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaagac 45538511  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||  |||||||||||||||  ||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  45538512 attggatgcttgttcttcaaagagcgttgacaaatcacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 45538602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 24551452 - 24551279
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||| |||||||| |||||| |||||||| || ||||||||   ||||| ||||||| ||| ||||||||||||| |||||||||| ||||| || ||    
T  24551452 acttaaggcttcaaaagttgtttaatggattcaacctcgtctaaagattgcagaagactggaaaagtgaagcaacgactattttgaaaagatttgaaggc 24551353  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    |||||||||||||||||  ||||||||| ||| |||||   |||||||| |||||||||||||| |||||||||    
T  24551352 attggatgcttgttcttcaaagagcgttaacatagtacgtttgtacgaagtgtacaaccactacctccactact 24551279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 15336051 - 15336235
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagact-agaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||  |||||||||||||| |||||| |||||| | || ||||||||   ||||| ||||||| |||| ||||||||||||| |||||||||    
T  15336051 aggagatgcaa--cttaaagcttcaaaagttgtttaatggaatcaaactcgtctaaagattgcagaagactgagaa-agtgaagcaacgactattttgaa 15336147  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||| || ||||||||||||| ||| |  |||||||||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  15336148 aggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 15336235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 15425116 - 15425300
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagact-agaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||  |||||||||||||| |||||| |||||| | || ||||||||   ||||| ||||||| |||| ||||||||||||| |||||||||    
T  15425116 aggagatgcaa--cttaaagcttcaaaagttgtttaatggaatcaaactcgtctaaagattgcagaagactgagaa-agtgaagcaacgactattttgaa 15425212  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||| || ||||||||||||| ||| |  |||||||||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  15425213 aggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 15425300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 15516420 - 15516604
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagact-agaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||  |||||||||||||| |||||| |||||| | || ||||||||   ||||| ||||||| |||| ||||||||||||| |||||||||    
T  15516420 aggagatgcaa--cttaaagcttcaaaagttgtttaatggaatcaaactcgtctaaagattgcagaagactgagaa-agtgaagcaacgactattttgaa 15516516  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||| || ||||||||||||| ||| |  |||||||||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  15516517 aggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 15516604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 18722610 - 18722793
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgct-gaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||| |||| |||| |||||||||  ||||||| |||||||||| || ||| |||||||  |||||| |||||||||||||||||| |||||||||||     
T  18722610 agatgaaagagttaatgcttcaaagactgttcaaaggatttaatcacggcta-gcattgcaagaagacaagaagagtgaagcaacgactattttgaaaga 18722708  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||| || ||||| ||||||| || ||||||||||||||| ||| ||||| |||||||| |||||||||||||  ||||||||||    
T  18722709 atttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactc 18722793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 18730955 - 18731138
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgct-gaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||| |||| |||| |||||||||  ||||||| |||||||||| || ||| |||||||  |||||| |||||||||||||||||| |||||||||||     
T  18730955 agatgaaagagttaatgcttcaaagactgttcaaaggatttaatcacggcta-gcattgcaagaagacaagaagagtgaagcaacgactattttgaaaga 18731053  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||| || ||||| ||||||| || ||||||||||||||| ||| ||||| |||||||| |||||||||||||  ||||||||||    
T  18731054 atttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactc 18731138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 19707692 - 19707497
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    ||||| |||| ||||||||||||||| ||||||| ||| ||||||    |||  |||||| |||||| |||||||||||||||||  || ||  || | |    
T  19707692 agatgaaagaattaaagcttcaaaggctgttcaaaggacttaatcattcctaa-cattgcagaagaccagaagagtgaagcaacggctaattcaaatgaa 19707594  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||| || |||||| ||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| ||||||||| |||||||||    
T  19707593 tttgaaggcattgaatggttgttctttgaagaacgttgacaaagtacaattgtacgaagtgtacaaccactacatcctctactcagtttgtgtctct 19707497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 1237815 - 1237641
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||| |||||||| | |||| |||||||| || ||||||||   ||||| ||||||  ||| ||||||||||||| |||||||||||||||| || ||    
T  1237815 acttaaggcttcaaaagctgtttaatggattcaacctcgtctaaagattgcagaagaccggaaaagtgaagcaacgactattttgaaaggatttgaaggc 1237716  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||  ||||||||  |||||||||||||||||||   ||| |||| |||||||||||||| ||||||||||    
T  1237715 attggatatttgttcttcaaagagcgttgacaaagtacttttgtgcgaagtgtacaaccactacctccactactc 1237641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 18685367 - 18685544
Alignment:
Q  10 aagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgct-gaagactagaagagtgaagcaacgaatattttgaaaggatttca 108  Q
    |||| |||| |||||||||  ||||||| |||| ||||| |||||| |||||||  |||||| |||||||||||||||| | ||||||||||| |||| |    
T  18685367 aagagttaatgcttcaaagactgttcaaaggatataatcacgtcta-gcattgcaagaagaccagaagagtgaagcaacaactattttgaaagaatttga 18685465  T
Q  109 aagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    | ||||| ||||||| || ||||||||||||||| ||| ||||| |||||||| |||||||||||||  ||||||||||    
T  18685466 aggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactc 18685544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 40845362 - 40845550
Alignment:
Q  14 cttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagca 113  Q
    |||||||||||||| |||||| || ||||| || ||||||||   ||||| ||||||| ||| |||  |||||||| ||||||| |||||||  || |||    
T  40845362 cttaaagcttcaaaagttgtttaa-ggattcaaactcgtctaaagattgcagaagactggaaaagtatagcaacgactattttggaaggattggaaggca 40845460  T
Q  114 ttggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||| |||||  ||||||||||||| ||||| | |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  40845461 ttggatgcttattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 40845550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 9320748 - 9320572
Alignment:
Q  13 acttaaagcttcaaaggttgttcaat-ggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaag 111  Q
    |||||| |||||||| | |||| ||| ||||| || ||||||||   ||||| ||||||| ||| ||||||||||| | |||||||||||||||| || |    
T  9320748 acttaaggcttcaaaagctgtttaattggattcaacctcgtctaaagattgcagaagactggaaaagtgaagcaacaattattttgaaaggatttgaacg 9320649  T
Q  112 cattggatgcttgttctt-tgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||| |||||   |||||||||||||||||| |  |||||||| |||||||||||||| ||||||||||    
T  9320648 cattggatgcttattcttcaaaagagcgttgacaaagtatatttgtacgaagtgtacaaccactacctccactactc 9320572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22745677 - 22745594
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagc 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||| |||||||    
T  22745677 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgtagaagactggaagtgtgaagc 22745594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 22461617 - 22461783
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    |||||||||||||||||| | ||||||||||| |  ||  |||||| ||||||||||||| ||||||||||| || ||  || |||||| || |||||||    
T  22461617 aagcttcaaaggttgttcgaaggatttaatctagcatat-cattgcagaagactagaagaatgaagcaacgactaattcaaatggatttgaaggcattgg 22461715  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactac 185  Q
    |||||| ||| ||| |||| ||||| |||| |||| |||||| | || ||||||||||  ||||||||    
T  22461716 atgcttattcgttggagagagttgaaaaaggacaattgtacggagtgcacaaccactatctccactac 22461783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 22673956 - 22673766
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| |||||| || ||||| || |||||||    ||||| ||||||||||| |||  ||||||   ||||||| |||||||  ||  |    
T  22673956 acttaaagcttcaaaagttgtttaacggattcaaactcgtctggagattgcagaagactagaaaagtatagcaacatctattttggaaggattagaagac 22673857  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||  || | ||||||||||    
T  22673856 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactttgtttttgtctctgct 22673766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 72 - 181
Target Start/End: Original strand, 19956373 - 19956482
Alignment:
Q  72 agaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaacc 171  Q
    |||||||||||||||||| || ||  ||||||||| || ||||||||| ||| ||| |||||||||||||| |||| |||| ||||| || |||||||||    
T  19956373 agaagagtgaagcaacgactaattctaaaggatttgaaggcattggatactttttcattgaagagcgttgaaaaaggacaattgtactaattgtacaacc 19956472  T
Q  172 actacatcca 181  Q
    ||||| ||||    
T  19956473 actacctcca 19956482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 36105383 - 36105183
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| || ||||| || ||||||||   ||||| ||||| | ||| |||  | |||||  ||||||| ||    
T  36105383 aggagatgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagattgcagaagattggaaaagtataacaacggctattttggaa 36105286  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||| || |||||  ||||||||||| | |||||   ||||| || |||||||||||||| |||||| ||| || | |||||||    
T  36105285 ggatttgaaggcattggatgtttattcttcaaagagcgttgatatagtacgtttgtacaaagtgtacaaccactacctccactgctctgtttttgtctct 36105186  T
Q  201 gct 203  Q
    |||    
T  36105185 gct 36105183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 14989522 - 14989614
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  14989522 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaattgtacaaccactatctccactactctgtttttgtctctgct 14989614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 24833029 - 24833204
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatgg-atttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaag 111  Q
    |||||| |||||||| | |||| ||||| ||| || |||||||| | ||||| ||||||| ||| |||||||||| |  || |||||| |||||| || |    
T  24833029 acttaaggcttcaaaagctgtttaatgggattcaacctcgtctaaggattgcagaagact-gaaaagtgaagcaatggctactttgaagggatttgaacg 24833127  T
Q  112 cattggatgcttgttctttgaa-gagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||||| |  || |||||||||||  ||||   |||||||| |||||||||||||| |||| |||||    
T  24833128 cattggatgcttgttcctcaaaagagcgttgacatggtacgtttgtacgaagtgtacaaccactacctccattactc 24833204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 25164134 - 25164058
Alignment:
Q  127 ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||| |||| || ||||||| |||||||| |||||||||||||  ||||||||||| | ||||||||||||    
T  25164134 ctttgaagagtgttgtcatagtacaattgtacgaagtgtacaaccactatctccactactcaatttgtgtctctgct 25164058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 45567955 - 45568048
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| || |||||||||| || | |||  |||||||||||||||||||   |||||||| ||||| |||||||| | ||||||||    
T  45567955 tttgaaaggatttgaaggcattggatgattatccttcaaagagcgttgacaaagtacttctgtacgaagtgtacgaccactaccttcactactc 45568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 13430699 - 13430775
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| |||||  ||||| ||||||| |||||   |||||||| |||||||||||||| ||||||||||    
T  13430699 gcattggatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactc 13430775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 18151717 - 18151809
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  |||||| |||||| |||||   |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  18151717 gcattggatgcttattcttcaaagagcattgacatagtacgtttgtacgaattgtacaaccactatctccactactctgtttttgtctctgct 18151809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 22663304 - 22663120
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| || ||||| || |||||||    ||||| ||||||| ||| | |  |||||| | ||||||| ||    
T  22663304 aggagatgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctgaagattgcagaagactggaaaaatatagcaacaactattttggaa 22663207  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     ||||  ||  |||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||| ||  ||||||||||    
T  22663206 agattagaagacattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccaatatctccactactc 22663120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 6407806 - 6407714
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||  |||||  ||||||||||||| |||||   | |||||| |||||||||||||  |||||||||| || | ||||||||||    
T  6407806 gcattggatgctaattcttcaaagagcgttgacatagtacgtttctacgaagtgtacaaccactatctccactactctgtttttgtctctgct 6407714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 21301102 - 21301010
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||  || |  ||||||||||||| |||||   ||||| || |||||||||||||| |||||||||| | || ||||||||||    
T  21301102 gcattggatgcttactcctcaaagagcgttgacatagtacgtttgtacaaagtgtacaaccactacttccactactctgagtttgtctctgct 21301010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 18772699 - 18772624
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| ||||||| ||| |||||  |||| ||||  |||| ||||||||||||| ||| ||||||||||    
T  18772699 gcattggatgcttattctttggagaacgttggaaaaggacaatagtac-aaatgtacaaccattacctccactactc 18772624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 4e-80; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 28492287 - 28492489
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| | ||||||||||    
T  28492287 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatatcgtctaagcattgcagaagactagaagagtgaagcaacaactattttgaaa 28492386  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  28492387 ggatttgaaggcattggatgcttgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 28492486  T
Q  201 gct 203  Q
    |||    
T  28492487 gct 28492489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 33256234 - 33256436
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||| |||    
T  33256234 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttaaaa 33256333  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  33256334 ggatttgaaggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 33256433  T
Q  201 gct 203  Q
    |||    
T  33256434 gct 33256436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 33276406 - 33276608
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||| |||    
T  33276406 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttaaaa 33276505  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  33276506 ggatttgaaggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 33276605  T
Q  201 gct 203  Q
    |||    
T  33276606 gct 33276608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22154054 - 22153852
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| | || |||||||    
T  22154054 aggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactagaatagtgaagcaacaactaatttgaaa 22153955  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  22153954 ggatttgaaagcattggatgattgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 22153855  T
Q  201 gct 203  Q
    |||    
T  22153854 gct 22153852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 1578064 - 1577862
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  1578064 aggagatgcaagacttagagcttcaaaggttgttcaatagatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 1577965  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    | |||| ||||||||||||||||||||||| |||||||||||||||||| || ||||| || |||||||||||||  ||||||||||||| |||||||||    
T  1577964 gaatttgaaagcattggatgcttgttcttttaagagcgttgacaaagtataattgtactaagtgtacaaccactatctccactactcagtttgtgtctct 1577865  T
Q  201 gct 203  Q
    |||    
T  1577864 gct 1577862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 2 - 203
Target Start/End: Complemental strand, 19717720 - 19717519
Alignment:
Q  2 ggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaag 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| || |||| ||||||||||||||||| |||||||||||    
T  19717720 ggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtcgaagcattgcagaggactggaagagtgaagcaacgactattttgaaag 19717621  T
Q  102 gatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctg 201  Q
    ||||| || |||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||  ||||| | ||||| ||||||||||    
T  19717620 gatttgaaggcatcggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactaactccacaaatcagtttgtgtctctg 19717521  T
Q  202 ct 203  Q
    ||    
T  19717520 ct 19717519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10757619 - 10757416
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||| |  |||||||||||||||| | |||||||||    
T  10757619 aggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctaagcattgcagaaaatcagaagagtgaagcaacaactattttgaa 10757520  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||  | ||||||||||| ||||||||    
T  10757519 aggatttgaaagcattggatgattgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccactatcttcactactcagtttgtgtctc 10757420  T
Q  200 tgct 203  Q
    ||||    
T  10757419 tgct 10757416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 1900542 - 1900340
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  1900542 aggagatgcaagacttaaagcttcaaaggttattcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 1900443  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||| ||||||||||||  ||||||||||||||||||||  |||| ||| |||||||||||||| |||||||||| || | |||||||    
T  1900442 ggatttaaaggcattgaatgcttgttcttcaaagagcgttgacaaagtacagttgtaagaagtgtacaaccactacctccactactctgtttttgtctct 1900343  T
Q  201 gct 203  Q
    |||    
T  1900342 gct 1900340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 20954356 - 20954558
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |||||||||||||| |   |||||||||    
T  20954356 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagacaggaagagtgaagcaatggccattttgaaa 20954455  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||||||||| ||||| || |||||||||||||  ||||||||||||| ||| |||||    
T  20954456 ggatttgaaagcattggaggcttattctttgaagagcgttgacaaagtacaattgtaccaagtgtacaaccactatctccactactcagtttgtttctct 20954555  T
Q  201 gct 203  Q
    |||    
T  20954556 gct 20954558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 12284617 - 12284418
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| | |||||||  ||||| ||| |||||||||||||| |||||||||||||    
T  12284617 agatgcaagacttagagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagaggagtgaagcaacgactattttgaaagga 12284518  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||  ||||||| ||||| ||||||||||||    
T  12284517 tttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaacactatctccactaatcagtttgtgtctctgct 12284418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22600065 - 22600267
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| ||||||| ||||||| || |||||| ||||||||||    
T  22600065 aggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatcttgtctaagcattgcagaagactggaagagtaaaacaacgactattttgaaa 22600164  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| || | |||||||    
T  22600165 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctct 22600264  T
Q  201 gct 203  Q
    |||    
T  22600265 gct 22600267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 38282763 - 38282562
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||  ||||||||||    
T  38282763 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcatcgcagaagactggaagagtgaagcaacgggtattttgaaa 38282664  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||| ||||||||||||  ||||||||||||||||||||| |||||||| | |||||||||||  |||||||||| || | |||||||    
T  38282663 ggatttaaaggcattgaatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagt-tacaaccactatctccactactctgtttttgtctct 38282565  T
Q  201 gct 203  Q
    |||    
T  38282564 gct 38282562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 3 - 186
Target Start/End: Original strand, 32785823 - 32786005
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||| ||||||||||||| || |||||||||    
T  32785823 gagatgcaagacttaaagcttcaaaggttgttca-tggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactagtttgaaagg 32785921  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    |||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  32785922 atttgaaggcattggatgcttgttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 32786005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22201619 - 22201821
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||  |||||| || |||||| ||||||||||||||| ||||||| |||||||  || ||| ||||||| | ||||||||||    
T  22201619 aggagatgcaagacttaaagcgacaaaggctgctcaatgcatttaatctcgtctaagcattgcagaagactgaaaaagtaaagcaacaactattttgaaa 22201718  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  22201719 ggatttgaaggcattggatgcttgttctatgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 22201818  T
Q  201 gct 203  Q
    |||    
T  22201819 gct 22201821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 48704398 - 48704199
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||| ||||||| |||||||||| |||| | |||||||||||||    
T  48704398 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtttaagcaatgcagaagactggaagagtgaaacaacaactattttgaaagga 48704299  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| || ||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| |   ||||||||||| | | ||||||||||    
T  48704298 tttgaaggcactggatgcttgttctttgaagaacgttgacaaagtacaattgtacgaagtgtacaaccaatgtctccactactcaatttatgtctctgct 48704199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 36134383 - 36134185
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| ||||  || ||| ||||||| ||| |||| |||||| | |||||||||||||    
T  36134383 agatacaagacttaaagtttcaaaggttgttcaatggatttaatctcatctaaacaatgcagaagactggaaaagtggagcaacaactattttgaaagga 36134284  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  36134283 tttgaa-gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 36134185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 4 - 186
Target Start/End: Complemental strand, 35402003 - 35401821
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||| ||  || | | ||||||| ||| ||||||||||||| |||||||||||||    
T  35402003 agatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtttaaacaatacagaagactggaaaagtgaagcaacgactattttgaaagga 35401904  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    ||| || |||||||||||||||||||  ||||||||||||||||||||| ||||| || |||||||||||||| |||||||||    
T  35401903 tttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactact 35401821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 2268725 - 2268526
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||  ||||||| ||||||| |||||||   ||||||||||    
T  2268725 aggagatgcaagacttaaggcttcaaaggttgttcaatggatttaatctcgtctaatcattgtagaagactggaagagttaagcaac---tattttgaaa 2268629  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
     ||||| || |||||| |||||||||| |  ||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| || | |||||||    
T  2268628 tgatttgaaggcattgaatgcttgttcgtcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcgactactctgtttttgtctct 2268529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 22427255 - 22427442
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||  |||||||| |||||||||||||||| ||||||| ||||||| ||| ||||||||||||| || ||||||||||||| || |||||    
T  22427255 taaagcttcaaagactgttcaatagatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcatt 22427354  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||  || |||||||||||||||||| |||||||| |||||||||||||| |||||||||  || | ||||||||||    
T  22427355 ggatgcttgttcttaaaaaagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactttgtttttgtctctgct 22427442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 29215992 - 29215792
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||||||||||| |||||||  |||||||||| ||||||||||||  || |||||||    
T  29215992 aggagatgcaa--cttaaagcttcaaaggttgtttaatggatttaatctcgtctaagcattgcaaaagactagaaaagtgaagcaacggctagtttgaaa 29215895  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||| | ||||||||||| |||||||| ||||||| |||||  |||||||||| || | |||||||    
T  29215894 ggatttgaaggcattggatgcttgttcttcaaagagcgataacaaagtacaattgtacgaagtgtacaatcactagctccactactctgtttttgtctct 29215795  T
Q  201 gct 203  Q
    |||    
T  29215794 gct 29215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 22464706 - 22464878
Alignment:
Q  16 taaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||| ||||||| ||| ||||||||||||| || ||||||| ||||| || ||||    
T  22464706 taaagcttcaaaaggttgttcaacggatttaatctcatctaagcattgcagaagactggaaaagtgaagcaacgactaatttgaaatgatttgaaggcat 22464805  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||||  |||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  22464806 tggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacatccactacctccactactc 22464878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 16235182 - 16235365
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||||||||  || ||| ||||||| ||| ||||||||||||| |||||||||||||    
T  16235182 agatgcaagatttaaaacttcaaaggttgttcaattgatttaatctcgtctaaacaatgcagaagactggaaaagtgaagcaacgactattttgaaagga 16235281  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||| || |||||| |||||||||||   ||||| ||||||||||||||| |||||||| |||||||| ||||| ||||||||||    
T  16235282 tttgaaggcattgaatgcttgttctccaaagagtgttgacaaagtacaattgtacgaagtgtacaacaactacctccactactc 16235365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 39200890 - 39201061
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||| | |||||||||||||||||||| | || ||||||| |||||||  |||||||||||||||  || ||||||||||||| ||  ||||    
T  39200890 taaagcttcaaaagctgttcaatggatttaatctcatgtaagcattgcagaagactgaaagagtgaagcaacggctagtttgaaaggatttgaagacatt 39200989  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  39200990 ggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 39201061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 2267271 - 2267101
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||| | || |||||||| |||| || |||||    
T  2267271 taaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacaactagtttgaaagaatttgaaggcatt 2267172  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    ||||| ||||||||  |||||||||| |||||| ||| |||| ||| |||||||||||||| |||||||||    
T  2267171 ggatgtttgttcttcaaagagcgttgtcaaagtgcaattgtatgaagtgtacaaccactacctccactact 2267101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 12613713 - 12613899
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    |||||||||||||||||||||||  ||||||||| || ||| ||||||| |||||| |||||||||||||||||  || ||  |||| |||| |||||||    
T  12613713 ttaaagcttcaaaggttgttcaaaagatttaatcacgccta-gcattgcagaagaccagaagagtgaagcaacggctaattcaaaag-atttgaaagcat 12613810  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| | |||||||| || ||||||||||||    
T  12613811 tggttgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccactaccttcactactctgtttgtgtctctgct 12613899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 30893290 - 30893090
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||||||||||| |||||| ||||||||| |||||| ||||||||| | |||||||  ||||  ||| ||||||||||| |  |||||||||    
T  30893290 aggagatgcaagacttaaagtttcaaaaggttgttcattggattcaatctcgtccaagcattgcaaaagatcagaggagtgaagcaaaggctattttgaa 30893191  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||| |||||| | ||||||||||||||||| |||| ||||| ||||||| |||||||| |||||||||||||  ||||||||| ||| ||||||||    
T  30893190 aggatttgaaagcactagatgcttgttctttgaatagcgctgacatagtacaattgtacgaagtgtacaaccactatctccactactaagtttgtgtctc 30893091  T
Q  200 t 200  Q
    |    
T  30893090 t 30893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 2834875 - 2834701
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||||||||| || ||||||||||||||| ||||||||||| |||||| ||||||||  || ||||||||||||  || ||||||||||||| || ||    
T  2834875 acttaaagcttccaaagttgttcaatggattcaatctcgtctaagcattgttgaagactgaaaaagtgaagcaacggctaatttgaaaggatttgaaggc 2834776  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||||||  |||| |||||||||||||| | |||||||| |||||||||||| | ||||||||||    
T  2834775 attggatgcttgttcttcaaagaacgttgacaaagtacgattgtacgaattgtacaaccactgcctccactactc 2834701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 35040351 - 35040161
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||| |||||||| |||||| |||||||  || ||||||||   ||||| ||||||||||| ||| ||||||||| |||||||||||||||| |||||    
T  35040351 acttaaggcttcaaaagttgtttaatggatccaacctcgtctaaagattgcagaagactagaaaagtaaagcaacgactattttgaaaggatttgaaagc 35040252  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||| ||||  |||||||||||||||||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  35040251 attggatgcttgatcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 35040161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 23036413 - 23036595
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||   | ||| |||||||| || |||||| |||| | |||||||||||||    
T  23036413 agatgcaagacttaaagcttcaaaggctattcaatggatttaatctcgtctaaataatgcagaagactaaaaaagtgaaacaacaactattttgaaagga 23036512  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    ||| ||  ||||||||||||||||||  ||||||||  |||||| |||| |||||||| |||||||||||||| ||| |||||    
T  23036513 tttgaagacattggatgcttgttcttcaaagagcgtcaacaaagaacaattgtacgaagtgtacaaccactacctcctctact 23036595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 21191763 - 21191947
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    ||||||||||||||||||||||| | |||||||| |  | |  |||||| |||||| ||||||||||||||||   || ||  ||||||||| || ||||    
T  21191763 ttaaagcttcaaaggttgttcaaagtatttaatcacacccaa-cattgcagaagaccagaagagtgaagcaacagctaattcaaaaggatttgaaggcat 21191861  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||| || |||||||||    
T  21191862 tggatgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttgtgtctct 21191947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 25448461 - 25448651
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| | |||| || ||||| || ||||||||   ||||| ||||||| ||| ||||||||| ||| |||||||||||||||| || ||    
T  25448461 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtgaagcagcgactattttgaaaggatttgaaggc 25448560  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||| |||||  |||||||||||||||||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  25448561 attggatgcttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 25448651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 21028980 - 21028788
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||| | ||||||||||| |||||||||| || | ||||||| |||||| | |||||||||||||||| || ||  || | | || ||     
T  21028980 agacttaaagcttcatatgttgttcaatgaatttaatctcatccaagcattgcagaagaccataagagtgaagcaacgactaattcaaatgaagttgaag 21028881  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||| | ||||||||||| ||||||||||||| |||| ||| |||||| ||||||  ||||||||||||| ||||||||||||    
T  21028880 gcattggatgcttgctttttgaagagcgctgacaaagtacaattgtatgaagtgtacagccactatctccactactcagtttgtgtctctgct 21028788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 7310015 - 7309830
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||| | ||||||||||||| | | ||||||| | ||||| |||||||| |||||||||||||||   |||||| |     
T  7310015 aggagatgcaagacttaaagcttcaaaagctgttcaatggattcagtgtcgtctaaggattgcagaagactataagagtgaagcaacggtcattttgtag 7309916  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||||| |||| || || |||||| ||  ||||||| |||||||| |||||||||||||| |||| |||||    
T  7309915 ggatttgaaggcattggatgctcgttc-ttcaaaagcgttaacgtagtacaattgtacgaagtgtacaaccactacctccaatactc 7309830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 26702022 - 26702214
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||| ||||  ||||||| |||||||| |  ||||||| |||||| || ||||||||||||| | || ||  || | | || ||     
T  26702022 agacttaaagcttcaaaggctgttatatggattcaatctcgtttgagcattgcagaagaccaggagagtgaagcaacaattaattcaaatgaagttgaag 26702121  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||| |||| | ||||||||| | ||||||||||||| |||||||| |||||||||||||| ||||||||| ||| ||||||||||||    
T  26702122 gcattggattcttgctttttgaagagtgatgacaaagtacaattgtacgaagtgtacaaccactacctccactacttagtatgtgtctctgct 26702214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 17024862 - 17025029
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    |||||||||||| |  ||||||| |||||||||| ||  ||  ||||||  ||||| | |||||||||||||||| || ||  ||||||||| || ||||    
T  17024862 ttaaagcttcaatgtctgttcaaaggatttaatcacgcataa-cattgcaaaagaccataagagtgaagcaacgactaattcaaaaggatttgaaggcat 17024960  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccact 183  Q
    |||||||||||||||| ||||||||||| |||  |||| |||||||| |||||||||||||| ||||||    
T  17024961 tggatgcttgttctttaaagagcgttgaaaaatgacaattgtacgaagtgtacaaccactacctccact 17025029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 48570117 - 48570316
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  ||||||| |||||| | |||| || ||||| || |||||||| | ||||| ||||||||||| |||  | |||||| ||||||| ||    
T  48570117 aggagatgcaa--cttaaagtttcaaaagctgtttaacggattcaaactcgtctaag-attgcagaagactagaaaagtataacaacgactattttggaa 48570213  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||  || ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | |||||||    
T  48570214 ggattaaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctct 48570313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 2327324 - 2327509
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| |||||| ||| |||| || ||||||||   ||||| || ||||  || ||||||||||  | ||||||||||    
T  2327324 aggagatgcaa--cttaaagcttcaaaagttgtttaatagattcaaactcgtctaaagattgcagatgactgaaaaagtgaagcaaaaactattttgaaa 2327421  T
Q  101 ggatttcaaagcattggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||  || |||||||||||||||| ||   |||||| ||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  2327422 ggattcgaacgcattggatgcttgttcctcaaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 2327509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 30572336 - 30572208
Alignment:
Q  59 attgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtac 158  Q
    ||||| ||||||| ||| |||  |||||||  |||||||||||||||  ||||||||||||| || ||||| |||||||||||||| ||||| | |||||    
T  30572336 attgcagaagactggaaaagtatagcaacggctattttgaaaggattgaaaagcattggatgtttattcttagaagagcgttgacatagtacgattgtac 30572237  T
Q  159 gaaatgtacaaccactacatccactactc 187  Q
    ||| |||||||||||||  ||||||||||    
T  30572236 gaagtgtacaaccactatctccactactc 30572208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21703008 - 21702809
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  ||||||||||||||  |||||  | ||||| || |||||||| | ||||| ||||||| ||| |||  |||||||  ||||||||||    
T  21703008 aggagatgcaa--cttaaagcttcaaaatttgtttcaaggattcaaactcgtctaag-attgcagaagacttgaaaagtatagcaacggctattttgaaa 21702912  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||  |  |||||| |||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | |||||||    
T  21702911 ggattgaagggcattgaatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctct 21702812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 38 - 187
Target Start/End: Original strand, 14263371 - 14263520
Alignment:
Q  38 tggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagc 137  Q
    |||||| |||| |||||| | ||||| ||||||| ||  ||  || |||||| |||||||||||||||| || ||||||||| ||||||| |  ||||||    
T  14263371 tggattaaatcccgtctaaggattgcagaagactggagaagcaaaacaacgactattttgaaaggatttgaaggcattggatacttgttcctcaaagagc 14263470  T
Q  138 gttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||| ||||| ||   |||||||| |||||||||||||| ||||||||||    
T  14263471 gttggcaaagcacgtttgtacgaagtgtacaaccactacctccactactc 14263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 44821430 - 44821630
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| |||||| || ||||| || |||||||| |  |||  |||||||  || |||  |||||||| ||||||| ||    
T  44821430 aggagatgcaa--cttaaagcttcaaaagttgtttaaaggattcaaactcgtctaaggtttgtagaagactgaaaaagtatagcaacgactattttggaa 44821527  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || || ||| |||||| |||||  ||||| ||||||| |||||   |||||||| |||||||| ||||  |||||||||| || | |||||||    
T  44821528 ggatttgaaggctttgtatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaactactatctccactactctgtttttgtctct 44821627  T
Q  201 gct 203  Q
    |||    
T  44821628 gct 44821630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 21121057 - 21121149
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||  |||||||||||||| |||||||||| || | ||||||||||    
T  21121057 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgacgtgtacaaccactacttccactactctgtttttgtctctgct 21121149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 21135153 - 21135245
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||| ||||||| |||||   |||||||| ||||||||||||| ||||||||||| || | ||||||||||    
T  21135153 gcattggatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactaaatccactactctgtttttgtctctgct 21135245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 21984683 - 21984607
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||| ||||||||||    
T  21984683 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactc 21984607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 46089076 - 46088984
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  46089076 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 46088984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 7745066 - 7745159
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| || ||||| ||||||| | |||  |||||||||||||||||||   | ||| || |||||||||||||| ||||||||||    
T  7745066 tttgaaaggatttgaatgcatttgatgcttatccttcaaagagcgttgacaaagtacgtttatacaaagtgtacaaccactacctccactactc 7745159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 42284715 - 42284642
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccacta 184  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||| |||||||    
T  42284715 gcattggatgctttttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccacta 42284642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 18896537 - 18896665
Alignment:
Q  58 cattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgta 157  Q
    |||||| ||||||||||||   |||||||||  || ||  |||| |||| || |||||||||||||  |||||| ||| |||||  |||| |||  ||||    
T  18896537 cattgcagaagactagaagcaagaagcaacggctaattcaaaagaatttgaaggcattggatgcttagtctttggagaacgttggaaaaggacagttgta 18896636  T
Q  158 cgaaatgtacaaccactacatccactact 186  Q
    |||| |||||||||||||| |||||||||    
T  18896637 cgaagtgtacaaccactacctccactact 18896665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 37642335 - 37642243
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||  |||||  ||||||||||||| |||||   | |||||| |||||||||||||| |||||||||| || | ||||||||||    
T  37642335 gcattggatgctaattcttcaaagagcgttgacatagtacgtttatacgaagtgtacaaccactacttccactactctgtttttgtctctgct 37642243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 21204916 - 21204992
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||| |  |||||  ||||||||||||| |||||   |||||||| |||||||||||||| ||||||||||    
T  21204916 gcattggatgttaattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactc 21204992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 34255552 - 34255601
Alignment:
Q  154 tgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||| |||||||||||||| |||||||||| | || ||||||||||    
T  34255552 tgtacgaactgtacaaccactacttccactactctgagtttgtctctgct 34255601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 14846 - 14644
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| | ||||||||||    
T  14846 aggaaatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaa 14747  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||||||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||| ||||||||||||| |||||||||    
T  14746 ggatttgaaggcattggatgcttgtactttgaagagcgttgacaaagtacaattttacgaagtgtacaaccactacctccactactcagtttgtgtctct 14647  T
Q  201 gct 203  Q
    |||    
T  14646 gct 14644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 23412917 - 23413119
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||| |||||| |||||||||||||||||| ||||||||||    
T  23412917 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcatccaagcattgcagaagaccagaagagtgaagcaacgattattttgaaa 23413016  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  23413017 ggatttgaaagcattggatgcttgttttttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 23413116  T
Q  201 gct 203  Q
    |||    
T  23413117 gct 23413119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 17815160 - 17814960
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||| |||||||    
T  17815160 gagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattctgaaagg 17815061  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||  ||||||||||||| |||||||||||    
T  17815060 atttgaaagcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacggagtgtacaaccactatctccactactcagtttgtgtctctgc 17814961  T
Q  203 t 203  Q
    |    
T  17814960 t 17814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6512374 - 6512573
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  6512374 aggagatgcaagacttaaagcttcaaaggttgttcagtggatttaatctcgtctaagcattgctgaagactggaagagtgaagcaacgactattttgaaa 6512473  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||   ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  | ||||||||||| |||||||||    
T  6512474 ggatttgaaggcattg---gcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatcttcactactcagtttgtgtctct 6512570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 89365 - 89567
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||| |||||||||||||||||| ||||||||||    
T  89365 aggagatgcaaaacttaaagcttcaaaagttgttcaatggatttaatctcgtctaagaattgcagaagaccagaagagtgaagcaacgactattttgaaa 89464  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    | |||| ||||||||| |||||||||||||||||||| |||||| ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  89465 gaatttgaaagcattgcatgcttgttctttgaagagcattgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 89564  T
Q  201 gct 203  Q
    |||    
T  89565 gct 89567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21910750 - 21910548
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||| ||||||| |||| ||| |||||||||||||||| ||||| |  |||||| ||| ||||||||||||| ||||||||||    
T  21910750 aggagatgcaagacttaaagcgtcaaaggctgttgaattgatttaatctcgtctaagcattacaaaagactggaaaagtgaagcaacgattattttgaaa 21910651  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  21910650 ggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 21910551  T
Q  201 gct 203  Q
    |||    
T  21910550 gct 21910548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 20551089 - 20550887
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||    
T  20551089 aggagatgcaagacttaaagcttcaaaaggttgttcaatggttttaatctcgtctaagcattgcagaaaactagaagagtgaagcaacgactattttgaa 20550990  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    | ||||| || |||||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||| || | ||||||    
T  20550989 aagatttgaaggcattggatgcttgttctttaaagagcgttgacaaa-tacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctc 20550891  T
Q  200 tgct 203  Q
    ||||    
T  20550890 tgct 20550887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 7745636 - 7745838
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| | || | ||||||  ||||||||||||||||||||||| | ||||||||||    
T  7745636 aggagatgtaagacttaaagcttcaaaggttgttcaatggatttaatcgcatccaagcattggagaagactagaagagtgaagcaacaactattttgaaa 7745735  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  7745736 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcggtttttgtctct 7745835  T
Q  201 gct 203  Q
    |||    
T  7745836 gct 7745838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 41566377 - 41566579
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||  ||||||||||    
T  41566377 aggagatgcaagacttaaagcttcaaaagctattcaatggatttaatctcgtctaagcattgcagaagactagaaaagtgaagcaacgtctattttgaaa 41566476  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||| || |||||||||||||||||| | ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  41566477 ggatttgaaggcattggatgtttattctttgaagagcgttgatatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 41566576  T
Q  201 gct 203  Q
    |||    
T  41566577 gct 41566579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21072184 - 21072385
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| | ||   ||||||| |||||| |||||||||||||||| | ||||||||||    
T  21072184 aggagatgcaagacttaaagcttaaaaggttgttctatggatttaatcac-tcacagcattgcagaagaccagaagagtgaagcaacaactattttgaaa 21072282  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  || |||||||||| |||||||||    
T  21072283 ggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctactactcagtttgtgtctct 21072382  T
Q  201 gct 203  Q
    |||    
T  21072383 gct 21072385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 19536243 - 19536446
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaag-agtgaagcaacgaatattttgaa 99  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||| | |||||||  ||||| | ||| ||||||||||||| | |||||||    
T  19536243 aggagatgcaagacttaaagcttcaagggctgttcaatggattcaatctcgtccaagcattgcaaaagaccaaaaggagtgaagcaacgacttttttgaa 19536342  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
     |||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||| ||| ||||||||    
T  19536343 tggatttgaaagcattggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtgtctc 19536442  T
Q  200 tgct 203  Q
    ||||    
T  19536443 tgct 19536446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 26784548 - 26784346
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||| | |||||||  ||||| |||  ||||||||||||| ||||||||||    
T  26784548 aggagatgcaagatttaaagctttaaaggctgttcaatggattcaatctcgtccaagcattgcaaaagaccagagcagtgaagcaacgactattttgaaa 26784449  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||||||  ||| | ||||||||| |||||||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||    
T  26784448 ggatttggaagaactggatgcttattctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactacctccactactcagtttgtgtgtct 26784349  T
Q  201 gct 203  Q
    |||    
T  26784348 gct 26784346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 13545463 - 13545641
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||        |||||||||||||||| | || |||||||    
T  13545463 aggagatgcaagacttaaagcttcaaaggttgttcaatggacttaatctcgtctaagcattgc--------agaagagtgaagcaacaactactttgaaa 13545554  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  13545555 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacaaccaccacctccactactc 13545641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 33022843 - 33022656
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||| ||| ||||||||||||| || ||||||||||||| || |||||    
T  33022843 taaagcttcaaaggctgttcaatggatttaatctcatctaagcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcatt 33022744  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||| ||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||  || | ||||||||||    
T  33022743 ggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactatgtttttgtctctgct 33022656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 31118057 - 31117869
Alignment:
Q  16 taaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    |||||||||||| ||||||| || |||||||| |||||||| ||||||| ||||||| ||| ||||||||||||| || |||||||| |||| || ||||    
T  31118057 taaagcttcaaaaggttgtttaacggatttaaactcgtctaagcattgcagaagactggaaaagtgaagcaacgactaatttgaaagaatttgaaggcat 31117958  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||  ||||| ||||||||||||||| |||||||| |||||| ||||||| |||||||||| || | ||||||||||    
T  31117957 tggatgcttgttcttcaaagagtgttgacaaagtacaaatgtacgaagtgtacatccactacttccactactctgtttttgtctctgct 31117869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 11994080 - 11993880
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  ||||||| |||||| | ||||||| ||||| || |||||||| | ||||| ||||||| ||| ||||||||||||  || ||||||     
T  11994080 aggagatgcaa--cttaaagtttcaaaagatgttcaacggattcaaactcgtctaaggattgcagaagactggaatagtgaagcaacggctaatttgaag 11993983  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||   |||||||| |||||||||||||| |||||||||| || | |||||||    
T  11993982 ggatttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtacgtatgtacgaagtgtacaaccactacttccactactctgtttttgtctct 11993883  T
Q  201 gct 203  Q
    |||    
T  11993882 gct 11993880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 4887204 - 4887014
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| |||||||||||||||||| || ||||    |||||  |||||| ||| |||  |||||||| |||||||||| ||||| || ||    
T  4887204 acttaaagcttcaaaagttgttcaatggatttaaacttgtcttaagattgcaaaagactggaaaagtatagcaacgactattttgaaaagatttgaaggc 4887105  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||  |||||||||||||||||||  ||||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  4887104 attggatgcttgttcttcaaagagcgttgacaaagtacgtgtgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 4887014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 25096777 - 25096955
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||||||||||| |||||||||  || ||| ||||||| |||||| |||||||||||||||||| || ||  ||||||||| ||     
T  25096777 agacttaaagcttcaaaggttgttcaaaggatttaattacgccta-gcattgcagaagaccagaagagtgaagcaacgattaattcaaaaggatttgaag 25096875  T
Q  111 gcattggatgcttgttctttgaagagcgttg---acaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     ||||||||||||||||||| ||||||||||   | |||| |||| |||||||| |||||||||||||| ||||||||||    
T  25096876 acattggatgcttgttctttaaagagcgttgaaaaaaaaggacaattgtacgaagtgtacaaccactacctccactactc 25096955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 25154747 - 25154925
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||||||||||| |||||||||  || ||| ||||||| |||||| |||||||||||||||||| || ||  ||||||||| ||     
T  25154747 agacttaaagcttcaaaggttgttcaaaggatttaattacgccta-gcattgcagaagaccagaagagtgaagcaacgattaattcaaaaggatttgaag 25154845  T
Q  111 gcattggatgcttgttctttgaagagcgttg---acaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     ||||||||||||||||||| ||||||||||   | |||| |||| |||||||| |||||||||||||| ||||||||||    
T  25154846 acattggatgcttgttctttaaagagcgttgaaaaaaaaggacaattgtacgaagtgtacaaccactacctccactactc 25154925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 23881246 - 23881059
Alignment:
Q  16 taaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    |||||||||||| ||||||| ||||||||||||| || ||| ||||||| |||||| || ||||||||||||||| || ||  || | | || || ||||    
T  23881246 taaagcttcaaaaggttgtttaatggatttaatcacgccta-gcattgcagaagaccaggagagtgaagcaacgactaattcaaatgaagttgaaggcat 23881148  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||| | ||||||||||||||||||||| ||| |||||||| |||||||||||||  ||||||||| ||| ||||||||||||    
T  23881147 tggatgcttgctttttgaagagcgttgacaaagtgcaattgtacgaagtgtacaaccactatctccactacttagtttgtgtctctgct 23881059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 30743172 - 30742988
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| |||||| |||||||| || ||||||||   ||||| ||||||| |||  |  ||||||||| ||||||||||    
T  30743172 aggagatgcaa--cttaaagcttcaaaagttgtttaatggattcaaactcgtctaaagattgcagaagactggaaaggcaaagcaacgattattttgaaa 30743075  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||| || |||||  |||||||||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  30743074 ggatttgaaggcattggatgtttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 30742988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 6499423 - 6499231
Alignment:
Q  11 agacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaa 109  Q
    ||||||||||||||||| ||||||||||||||||||||| |  | | | ||||| |||||| || |||||||||||||   |||||  || | | || ||    
T  6499423 agacttaaagcttcaaaaggttgttcaatggatttaatcacaccca-gtattgcagaagaccaggagagtgaagcaacatctatttcaaatgaagttgaa 6499325  T
Q  110 agcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
     |||| ||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||||    
T  6499324 ggcatcggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 6499231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 21198958 - 21199148
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||||||||||| |||||||||| || ||| | | ||| |||||| |||| | ||| ||||||  || ||  || | |||| ||     
T  21198958 agacttaaagcttcaaaggttgttcaaaggatttaatcacgccta-gtactgcagaagaccagaaaaatga-gcaacggctaattcaaatgaatttgaag 21199055  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||| |||||||| | |||||||||||||||||| |||||||| ||||||| |||||| ||||||||||||| ||||||||||||    
T  21199056 gcattggatgctcgttctttggaaagcgttgacaaagtacaattgtacgaagtgtacaatcactacctccactactcagtttgtgtctctgct 21199148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 642661 - 642836
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    |||||||||||||||||||||||||||||||||||||| |  ||| ||||| | |||||  || |||||||| |||||  || ||  ||   | || ||     
T  642661 agacttaaagcttcaaaggttgttcaatggatttaatcacaccta-gcattacagaagatcaggagagtgaaacaacggctaattcaaataaagttgaag 642759  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||    
T  642760 gcattggatgcttgttttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 642836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 15517151 - 15516977
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| ||||||||| ||||| || ||||||||   ||||| ||||||| ||| |||  |||||||  ||||||| |||||||| || ||    
T  15517151 acttaaagcttcaaaagttgttcaacggattcaaactcgtctaaagattgcagaagactggaaaagtatagcaacggctattttggaaggatttgaaggc 15517052  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||| |||||  ||||| |||| || |||||   |||||||| |||||||||||||| ||||||||||    
T  15517051 attggatgcttattcttcaaagagtgttggcatagtacttttgtacgaagtgtacaaccactacctccactactc 15516977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 203
Target Start/End: Original strand, 12352763 - 12352940
Alignment:
Q  26 aaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgt 125  Q
    |||| |||||| ||||||| |||| ||||| ||||||| |||||  || || ||||||||| |  || ||  || | | || || ||||||||||||||     
T  12352763 aaggctgttcattggatttgatcttgtctaagcattgcagaagatcaggagggtgaagcaatggctaattcaaatgaagttaaaggcattggatgcttgc 12352862  T
Q  126 tctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
      ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||||    
T  12352863 attttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 12352940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 14086492 - 14086684
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatgg-atttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaag 111  Q
    |||||| |||||||| | |||| ||||| ||| || |||||||| | ||||| ||||||| ||| ||||||||||||  |||||||||  ||||| || |    
T  14086492 acttaaggcttcaaaagctgtttaatgggattcaacctcgtctaaggattgcagaagactggaaaagtgaagcaacggctattttgaagtgatttgaatg 14086591  T
Q  112 cattggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||| ||   |||||||||||||||||||   |||||||| ||||||||| |||| |||||||||| || | ||||||||||    
T  14086592 cattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccgctacctccactactctgtttttgtctctgct 14086684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 21099658 - 21099849
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||| |||| |||||||||||||  | ||| ||||| |  ||||| |  ||||||||||||| | || ||  || | |  | ||     
T  21099658 agacttaaagcttcaaaggctgttaaatggatttaatcatgccta-gcattacaaaagaccaagagagtgaagcaacaactaattcaaatgaagctgaag 21099756  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||   |||||||| |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  21099757 gcattggatgcttgccttttgaagaacgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactcagtttgtgtctctgct 21099849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 42243873 - 42243688
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| || ||||| || ||||||||   ||||| ||||||| ||| ||||||||||| | ||||||||||    
T  42243873 aggagatgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaaaattgcagaagactggaaaagtgaagcaacaactattttgaaa 42243776  T
Q  101 ggatttcaaagcattggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| ||  |||| |||| ||||| |||  ||||||||||||||| |||   |||||||| |||||||||||||| ||||||||||    
T  42243775 ggatttgaagacatttgatgtttgttccttaaaagagcgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactc 42243688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 33933453 - 33933259
Alignment:
Q  13 acttaaagcttcaaag--gttgttcaatgg-atttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaa 109  Q
    |||||||||||||||   |||||| ||||| ||| || |||||||| | |||||  |||||| ||| ||||||||||| | |||||||||||||||| ||    
T  33933453 acttaaagcttcaaaaaagttgtttaatgggattcaacctcgtctaaggattgcaaaagactggaaaagtgaagcaacaactattttgaaaggatttaaa 33933354  T
Q  110 agcattggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
     |||||||||||||||| ||   ||||||||||| | |||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  33933353 cgcattggatgcttgttcctcaaaagagcgttgatatagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 33933259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 9398787 - 9398879
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||| ||||||  | ||||||||||||||||||||||||| |||||||| |||| ||||||||  ||||||||||||| ||||||||||||    
T  9398787 gcattgaatgcttactttttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactatctccactactcagtttgtgtctctgct 9398879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 26759341 - 26759157
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| |||||| || ||||| ||  ||| |||   ||||| ||||||| ||| |||  | |||||| ||||||| ||    
T  26759341 aggagatgcaa--cttaaagcttcaaaagttgtttaacggattcaaattcgcctaaagattgcagaagactggaaaagtataacaacgactattttggaa 26759244  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || ||||||||||||| |||||  ||||||| ||| | ||||    |||||||| |||||||||||||| ||||||||||    
T  26759243 ggatttgaaggcattggatgcttattcttcaaagagcgctgaaatagtaagtttgtacgaagtgtacaaccactacctccactactc 26759157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 203
Target Start/End: Original strand, 30115863 - 30115982
Alignment:
Q  84 caacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccact 183  Q
    |||||| |||||||||||||||  |  ||||| ||||||| |||||  ||||||||||||| |||||   ||||||||||||||||||||||  ||||||    
T  30115863 caacgactattttgaaaggattgaagggcatttgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaaatgtacaaccactatctccact 30115962  T
Q  184 actcagtgtgtgtctctgct 203  Q
    |||| || | ||||||||||    
T  30115963 actctgtttttgtctctgct 30115982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 203
Target Start/End: Original strand, 29138430 - 29138551
Alignment:
Q  82 agcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatcca 181  Q
    |||||| | ||||||| |||||||  || ||||||||||||| |||||  |||||||||| || |||||   |||||||| |||||||||||||  ||||    
T  29138430 agcaacaactattttggaaggattagaaggcattggatgcttattcttcaaagagcgttgtcatagtacgtttgtacgaagtgtacaaccactatctcca 29138529  T
Q  182 ctactcagtgtgtgtctctgct 203  Q
    |||||| || ||||||||||||    
T  29138530 ctactctgtttgtgtctctgct 29138551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 203
Target Start/End: Complemental strand, 28139720 - 28139599
Alignment:
Q  82 agcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatcca 181  Q
    |||||||| |||||||||||||||  ||  |||||||||||| |||||   |||||||||||| ||||    |||||||| |||||||||||||  ||||    
T  28139720 agcaacgactattttgaaaggattgaaagacattggatgcttattcttcatagagcgttgacatagtatgtttgtacgaagtgtacaaccactatctcca 28139621  T
Q  182 ctactcagtgtgtgtctctgct 203  Q
    |||||| || | ||||||||||    
T  28139620 ctactctgtttttgtctctgct 28139599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 32160867 - 32160774
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| || ||||||||||||| | |||  |||||||||||||||| ||   |||||||| ||||| |||||||| ||||||||||    
T  32160867 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagaacgtatgtacgaagtgtacgaccactacctccactactc 32160774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 26765634 - 26765506
Alignment:
Q  59 attgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtac 158  Q
    ||||| ||||||| ||| |||  |||||| | ||||||| |||||||| || ||||||||||||| |||||  ||||||| ||| | |||||   |||||    
T  26765634 attgcagaagactggaaaagtatagcaacaactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgctgaaatagtacgtttgtac 26765535  T
Q  159 gaaatgtacaaccactacatccactactc 187  Q
    ||| |||||||||||| | ||||||||||    
T  26765534 gaagtgtacaaccactgcctccactactc 26765506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 35932059 - 35932151
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||| ||||||| |||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  35932059 gcattggatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgct 35932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 200
Target Start/End: Original strand, 3245442 - 3245583
Alignment:
Q  59 attgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtac 158  Q
    ||||| ||||||| ||| |||  |||||||  ||||||||||| |||  || ||||| ||||||| |||||  ||||||||||||| |||||   |||||    
T  3245442 attgcagaagactggaaaagtatagcaacggctattttgaaagaattgaaaggcatttgatgcttattcttcaaagagcgttgacatagtacgtttgtac 3245541  T
Q  159 gaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||| |||||||||||||  |||| ||||| || | |||||||    
T  3245542 gaagtgtacaaccactatctccagtactctgtttttgtctct 3245583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 9089053 - 9088961
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||  |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  9089053 gcattggatgctaattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 9088961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 187
Target Start/End: Original strand, 11208011 - 11208114
Alignment:
Q  83 gcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccac 182  Q
    ||||||| |||||||||  ||||| || ||||||||||||    |||  ||||||||||||||||||| | |||||||| |||| ||||||||| |||||    
T  11208011 gcaacgactattttgaagagatttgaatgcattggatgctcagccttcaaagagcgttgacaaagtacta-tgtacgaagtgtataaccactacctccac 11208109  T
Q  183 tactc 187  Q
    |||||    
T  11208110 tactc 11208114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 28464392 - 28464481
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  || ||||||| || | |||||||    
T  28464392 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctctactactctgtttttgtctct 28464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 35986284 - 35986377
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaa-tgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||| | |||||  ||||||||||||| |||||   ||||| ||| |||||||||||||| |||||||||| | || ||||||||||    
T  35986284 gcattggatgcctattcttcaaagagcgttgacatagtacgtctgtacaaaagtgtacaaccactacttccactactctgagtttgtctctgct 35986377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 9398698 - 9398742
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtcta 55  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||    
T  9398698 agacttaaaggttcaaaggttgttcattggatttgatctcgtcta 9398742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 25930209 - 25930301
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| || ||  ||||||||||||| |||||   |||||||| |||||||||||||  || ||||||| || | ||||||||||    
T  25930209 gcattggatgcttatttttcaaagagcgttgacatagtacgtttgtacgaattgtacaaccactatctctactactctgtttttgtctctgct 25930301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 21660253 - 21660204
Alignment:
Q  154 tgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||| |||||||||||||| |||||||||| | || ||||||||||    
T  21660253 tgtacgaagtgtacaaccactacttccactactctgagtttgtctctgct 21660204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 10848857 - 10848765
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||| ||||||| |||||  ||||||||||||| | |||   ||||| || |||||||||||||  |||||||||| || | ||||||||||    
T  10848857 gcattagatgcttattcttcaaagagcgttgacataatacgtttgtacaaagtgtacaaccactatctccactactctgtttttgtctctgct 10848765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 29680463 - 29680665
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  29680463 aggagatgcaagacttaaagctccaaaggttgttcaatggatttaatcttgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 29680562  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| || ||  ||||||||||||| |||||||||    
T  29680563 ggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaatcattatctccactactcagtatgtgtctct 29680662  T
Q  201 gct 203  Q
    |||    
T  29680663 gct 29680665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19666564 - 19666362
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  19666564 aggagatgcaagacttaaagcttgaaaggttattcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 19666465  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||| || |||||||||||||||| ||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  19666464 ggatttgaaagcattgaatacttgttctttgaagagagttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 19666365  T
Q  201 gct 203  Q
    |||    
T  19666364 gct 19666362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16632632 - 16632430
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||||| |||||| ||||||||||    
T  16632632 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtataagcattgcagaagactggaagagtgaatcaacgactattttgaaa 16632533  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
     ||||| || ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| | ||||| |||||||||    
T  16632532 agatttgaaggcattggattcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccaccaatcagtttgtgtctct 16632433  T
Q  201 gct 203  Q
    |||    
T  16632432 gct 16632430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 203
Target Start/End: Original strand, 37985533 - 37985733
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||||||  || ||||||||||| | ||||||||||||    
T  37985533 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcatctaagcatcgcagaagactgaaaaagtgaagcaacaactattttgaaagg 37985632  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| || |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  37985633 atttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 37985732  T
Q  203 t 203  Q
    |    
T  37985733 t 37985733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 3 - 195
Target Start/End: Complemental strand, 12601291 - 12601099
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||| |||||| |||||| ||||||||||||    
T  12601291 gagatgcaagacttaaagcgtcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagacttgaatagtgaatcaacgactattttgaaagg 12601192  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtg 195  Q
    |||| || |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| ||||    
T  12601191 atttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtg 12601099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 3395782 - 3395580
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||| ||||||| ||| |||  || ||||||||||||| ||||||||||    
T  3395782 aggagatgcaagacttaaatcttcaaaagttgttcaatggattaaatatcgtctaagcattgcagaaaactgaaaaagtgaagcaacgactattttgaaa 3395683  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  3395682 ggatttgaaagcattggatgctagttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 3395583  T
Q  201 gct 203  Q
    |||    
T  3395582 gct 3395580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 19620980 - 19621182
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | |||||||  ||||| |||  ||||||||||||| ||||||||||    
T  19620980 aggagatgcaagagttaaagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagagaagtgaagcaacgactattttgaaa 19621079  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||| ||||| |||||||||    
T  19621080 ggatttgaaagcattggatgcttgttctatgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactattcagtttgtgtctct 19621179  T
Q  201 gct 203  Q
    |||    
T  19621180 gct 19621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 37435454 - 37435656
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| | ||||||||||||||||| ||||||||||    
T  37435454 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgcagaagattggaagagtgaagcaacgactattttgaaa 37435553  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||||||||| ||||| | |||||||| |||||||||||||| |||||||||  || | |||||||    
T  37435554 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacatagtactattgtacgaagtgtacaaccactacctccactactttgtttttgtctct 37435653  T
Q  201 gct 203  Q
    |||    
T  37435654 gct 37435656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12811097 - 12811296
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||||  |||||||||||||||| ||||||||||    
T  12811097 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttagtttcgtctaagcattgcagaagactgaaagagtgaagcaacgactattttgaaa 12811196  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||||||||||||||   || ||||||||||||||| || |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  12811197 ggatttgaaggcattggatgcttgttct---aatagcgttgacaaagtaaaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 12811293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 9141097 - 9140902
Alignment:
Q  8 gcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttc 107  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||  ||||||| ||| ||| ||||||||| ||||||||||||||||     
T  9141097 gcaagacttaaagcttcaagggttgttcaatggattcaatctcgtctaagcattgtagaagactggaaaagtaaagcaacgactattttgaaaggatttg 9140998  T
Q  108 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    || |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  | ||||||||||| ||||||||||||    
T  9140997 aaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatcttcactactcagtttgtgtctctgct 9140902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 14604825 - 14605012
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||| ||||||||||||||||||||| | ||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||| | |||||| |||    
T  14604825 aggagatccaagacttaaagcttcaaaggctattctatggattcaatctcgtctaagcattgcagaagactagaagagtgaagcaacaactatttttaaa 14604924  T
Q  101 -ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  14604925 aggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 14605012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 55380482 - 55380280
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||  | |||  |||||| |||||| |||||||||||||||| | |||||||||    
T  55380482 aggagatgcaagacttaaagcttcaaaaggctgttcaatggatttaatcatgcctaa-cattgcagaagaccagaagagtgaagcaacaactattttgaa 55380384  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||    
T  55380383 aggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctc 55380284  T
Q  200 tgct 203  Q
    ||||    
T  55380283 tgct 55380280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 45833586 - 45833400
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||   ||||||||||    
T  45833586 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagttaagcaacttctattttgaaa 45833487  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    | |||| || ||||||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||    
T  45833486 gtatttgaatgcattggatgctttttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 45833400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19884893 - 19884692
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| ||||||| ||| ||||||||||||| || |||||||    
T  19884893 aggagatgcaagacttaaagcttcaaaggatgttca-tggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactagtttgaaa 19884795  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||  ||||||| || || | |||||||    
T  19884794 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactaatctgtttttgtctct 19884695  T
Q  201 gct 203  Q
    |||    
T  19884694 gct 19884692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 22675454 - 22675628
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||| || ||||||||||||| || |||||    
T  22675454 taaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactagaaaagtgaagcaacgactagtttgaaaggatttgaaggcatt 22675553  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagt 190  Q
     |||||||||||||  ||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||    
T  22675554 tgatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactactcagt 22675628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 19911799 - 19912002
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||| |||||||||||||| |||| ||||||||| | |||||||  ||||| |||  ||||||||||||| ||||||||||    
T  19911799 aggagatgcaagacttaaagctttaaaggttgttcaatagattcaatctcgtccaagcattgcaaaagaccagagcagtgaagcaacgactattttgaaa 19911898  T
Q  101 ggatttcaaagcattggatgcttgttctttg-aagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||| |||| || ||||| || |||||||||||||| ||||||||||||| |||| |||    
T  19911899 ggatttgaaagcattggatgcttattctttgaaagagcgttgacatagtataattgtacaaagtgtacaaccactacctccactactcagtttgtgcctc 19911998  T
Q  200 tgct 203  Q
    ||||    
T  19911999 tgct 19912002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 14833588 - 14833449
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  14833588 aggagatgcaagacttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 14833489  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgtt 140  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  14833488 ggatttgaaagcattggatgcttgttctttgaagagcgtt 14833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 56034763 - 56034567
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||| ||||||||||  |    
T  56034763 agatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtccaagcattgcagaagactggaagagtgaagcaacgactattttgaaataa 56034664  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||| || |||||||||| ||||||||  ||||||||||||||||||||| |||   ||||||||||| ||||  ||||||||||| | |||||||||    
T  56034663 tttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtctaaaatgtacaactactatctccactactcaatatgtgtctct 56034567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 13576048 - 13576235
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||  || ||||||||||||| || |||||    
T  13576048 taaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgcctagtttgaaaggatttgaaggcatt 13576147  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
     |||||||||||||  ||||||||||||| ||||||| |||||||| |||| |||||||||||||||| ||| || | ||||||||||    
T  13576148 agatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccactacatccactgctctgtttttgtctctgct 13576235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 3483911 - 3483738
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    |||||||||||||||||||||||||   | ||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||| ||||||||||||    
T  3483911 gagatgcaagacttaaagcttcaaaaactattcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactattttgaaagg 3483812  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactac 176  Q
    |||| || ||||||||||||| |||||  ||||||||||||||||||||| ||||||||  | |||||||||||    
T  3483811 atttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagcgcacaaccactac 3483738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10073126 - 10072925
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||| || ||||||| ||| |||||||||||   || |||||||    
T  10073126 aggagatgcaagacttaaagcttcaaaggttgttca-tggatttaatctcgtttaagcatagcagaagactggaaaagtgaagcaactgctagtttgaaa 10073028  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||| ||||||| ||  ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||  || | |||||||    
T  10073027 ggatttgaaggcattggaggcttgttattcaaagagcgttgacaaagtacaaatgtacgaagtgtacaaccactatctccactactatgtttttgtctct 10072928  T
Q  201 gct 203  Q
    |||    
T  10072927 gct 10072925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 14904275 - 14904477
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||| |||||||||||| | | ||||| ||||||||||||||||| ||||||| ||||||| ||| ||||||||||||   |||||||||    
T  14904275 aggagatgcaagacctaaagcttcaaaagctattcaaaggatttaatctcgtctaggcattgcagaagactggaaaagtgaagcaacgtccattttgaaa 14904374  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||  |||||||||||| |||||||||||||||||||| ||||||| |||||||| |  ||||||| ||  ||||| ||||||| |||||||||    
T  14904375 ggatttgaagacattggatgcttattctttgaagagcgttgacatagtacaattgtacgaagtaaacaaccattatctccaccactcagtttgtgtctct 14904474  T
Q  201 gct 203  Q
    |||    
T  14904475 gct 14904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 413182 - 413008
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||| ||| ||||||||||||  || ||||||||||||| || ||    
T  413182 acttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcattgcagaagactcgaaaagtgaagcaacggctaatttgaaaggatttgaaggc 413083  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||| ||| ||||||||  ||||||||||||||||||| | |||||||| |||||||||||| | ||||||||||    
T  413082 attgaatgtttgttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactgcctccactactc 413008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 17247422 - 17247250
Alignment:
Q  14 cttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagca 113  Q
    |||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||| | ||| ||||||||||||| || ||||||||||||| || |||    
T  17247422 cttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcattgcagaagattggaa-agtgaagcaacgactaatttgaaaggatttgaaggca 17247324  T
Q  114 ttggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||| ||| ||||||||  |||| | |||||||||||||| |||||||| |||||||||||| | ||||||||||    
T  17247323 ttgaatgtttgttcttcaaagaacattgacaaagtacaattgtacgaagtgtacaaccactgcctccactactc 17247250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 40846281 - 40846089
Alignment:
Q  11 agacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaa 109  Q
    ||||||||||||||||| || |||||||||||||||||| || ||| ||||||| |||||| || | ||||||||||||| || ||  || | | || ||    
T  40846281 agacttaaagcttcaaaaggctgttcaatggatttaatcacgccta-gcattgcagaagaccaggaaagtgaagcaacgactaattcaaatgaagttgaa 40846183  T
Q  110 agcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||| ||||||||    
T  40846182 agcattggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtatctctgct 40846089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 6641861 - 6641674
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    ||||||||||||||||||||||| ||||||||||  | ||| ||||||  |||||  ||||||||||| |||||  || ||  ||||||||| || ||||    
T  6641861 ttaaagcttcaaaggttgttcaaaggatttaatcatgccta-gcattgtagaagatcagaagagtgaaacaacggctaattcaaaaggatttgaaggcat 6641763  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    | ||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  6641762 ttgatacttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttatgtctctgct 6641674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 29121550 - 29121362
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||| |||||||| | |||| |||||||| || ||||||||   ||||| |||||||  || ||||||||||||| |||||||||||||||| || ||    
T  29121550 acttaaggcttcaaaagctgtttaatggattcaacctcgtctaaagattgcagaagactgaaaaagtgaagcaacgactattttgaaaggatttgaaggc 29121451  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctg 201  Q
    | |||||||||||||||| |||||||||||||||||||   |||||||| |||||||||||||| |||||||||| || | ||||||||    
T  29121450 actggatgcttgttctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctg 29121362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10693041 - 10692841
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| |||||| || ||||| || ||||||||   ||||| ||||||| ||| ||||||||||| | ||||||||||    
T  10693041 aggagatgcaa--cttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtgaagcaacaactattttgaaa 10692944  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||||| |||||||||   |||| ||| |||||||||||||| |||||||||| || | |||||||    
T  10692943 ggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtatgaagtgtacaaccactacctccactactctgtttttgtctct 10692844  T
Q  201 gct 203  Q
    |||    
T  10692843 gct 10692841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10906807 - 10906607
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| |||||| || ||||| || ||||||||   ||||| ||||||| ||| ||||||||||| | ||||||||||    
T  10906807 aggagatgcaa--cttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtgaagcaacaactattttgaaa 10906710  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||||| |||||||||   |||| ||| |||||||||||||| |||||||||| || | |||||||    
T  10906709 ggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtatgaagtgtacaaccactacctccactactctgtttttgtctct 10906610  T
Q  201 gct 203  Q
    |||    
T  10906609 gct 10906607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 8105819 - 8105643
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatgg-atttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaag 111  Q
    |||||| |||||||| |||||| ||||| ||| ||  ||||||| | ||||| ||||||| ||| | ||||||||||  |||||||||||||||| || |    
T  8105819 acttaaggcttcaaaagttgtttaatgggattcaacttcgtctaaggattgcagaagactggaaaattgaagcaacggctattttgaaaggatttgaacg 8105720  T
Q  112 cattggatgcttgttctttgaa-gagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||||| |  || |||||||||||||||||   ||||||||||||||||||||||| ||||||||||    
T  8105719 cattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaaatgtacaaccactacctccactactc 8105643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 54680118 - 54679936
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| |||||  | || ||||||||   ||||| ||||||| ||| ||||||||||| | ||||||||||    
T  54680118 aggagatgcaa--cttaaagcttcaaaagctgtttaatgg--tcaaactcgtctaatgattgcagaagactggaaaagtgaagcaacaactattttgaaa 54680023  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||| ||||||||  |||||| ||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  54680022 ggatttgaaggcattggatgtttgttcttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 54679936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 23750712 - 23750512
Alignment:
Q  1 aggagatgcaagacttaaagcttc-aaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||| ||| |||||| || ||||||||||||||| |  ||  ||    
T  23750712 aggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatcacgccta-gcactgcagaagaccaggagagtgaagcaacgactgcttcaaa 23750614  T
Q  100 aggatttcaaagcattggatgcttgttctt-tgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtct 198  Q
     | | || || ||||| |||||||||| || ||||| ||||   |||||||||| |||||||| |||||||||| ||  ||||||||||||| |||||||    
T  23750613 tgaagttaaaggcatttgatgcttgtttttatgaagtgcgt---caaagtacaattgtacgaagtgtacaaccattatctccactactcagtttgtgtct 23750517  T
Q  199 ctgct 203  Q
    |||||    
T  23750516 ctgct 23750512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 6517675 - 6517475
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| ||| || || ||||| || ||||||||   ||||| ||||||| ||| |||  |||||||| ||||||| ||    
T  6517675 aggagatgcaa--cttaaagcttcaaaagttatttaaaggattcaaactcgtctaaagattgcagaagactggaaaagtatagcaacgactattttggaa 6517578  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||  |||||||  ||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | |||||||    
T  6517577 ggattggaaagcatgagatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctct 6517478  T
Q  201 gct 203  Q
    |||    
T  6517477 gct 6517475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 15139409 - 15139283
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    |||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||| || ||||||||||||||| || ||  || | | || ||     
T  15139409 agacttaaagattcaaaggttgttcaatggatttaatctcgtttaagcattgcagaagaccaggagagtgaagcaacgactaattcaaatgaagttgaag 15139310  T
Q  111 gcattggatgcttgttctttgaagagc 137  Q
    |||||||||||||| | ||||||||||    
T  15139309 gcattggatgcttgctttttgaagagc 15139283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 58 - 187
Target Start/End: Complemental strand, 11915835 - 11915706
Alignment:
Q  58 cattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgta 157  Q
    |||||| |||||||| |||||||||||||||| |||||  || |||||| || ||||||||||||| |||||||||||||||||  |||| |||| ||||    
T  11915835 cattgcagaagactaaaagagtgaagcaacgactatttcaaatggatttgaaggcattggatgcttattctttgaagagcgttggaaaaggacaattgta 11915736  T
Q  158 cgaaatgtacaaccactacatccactactc 187  Q
    | || |||||||||||  | ||||||||||    
T  11915735 caaagtgtacaaccaccgcctccactactc 11915706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 16853602 - 16853493
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtg 193  Q
    |||||| |||||| |||||||||||||||||||| |  ||||||||||||||||||||  |||| ||| |||||||||||||| |||||||||| || |     
T  16853602 tttgaagggatttgaaagcattggatgcttgttcctcaaagagcgttgacaaagtacatctgtatgaagtgtacaaccactacctccactactctgtttt 16853503  T
Q  194 tgtctctgct 203  Q
    ||||||||||    
T  16853502 tgtctctgct 16853493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23123623 - 23123528
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatatttt 96  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | ||||  |||||||  ||||||||||||| || ||||||    
T  23123623 aggagatgcaagacttaaagcttcaaagattgttcaatgaatttaatctcgtctaagtattgtagaagactgaaagagtgaagcaatgactatttt 23123528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 56533018 - 56533167
Alignment:
Q  39 ggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaa-gagc 137  Q
    ||||| || |||||||| | ||||| |||||||  || | ||||||||||  |||||||||||||||| || ||||| |||| |||||| |  || ||||    
T  56533018 ggattcaacctcgtctaaggattgcagaagactgaaaaaatgaagcaacggctattttgaaaggatttgaatgcattagatgtttgttcctcaaaagagc 56533117  T
Q  138 gttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  56533118 gttgacaaagtacgtttgtacgaagtgtacaaccactacttccactactc 56533167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 25651087 - 25651209
Alignment:
Q  65 gaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatg 164  Q
    ||||||| ||| ||||||||||||  ||||||| |||||||| || |||||| |||||| |||||  ||||||||||||  |||||   ||||| || ||    
T  25651087 gaagacttgaaaagtgaagcaacggctattttggaaggatttgaaggcattgaatgcttattcttcaaagagcgttgacgtagtacgtttgtacaaagtg 25651186  T
Q  165 tacaaccactacatccactactc 187  Q
    |||||||||||| ||||||||||    
T  25651187 tacaaccactacctccactactc 25651209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 3105341 - 3105540
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | ||||  | ||||| || |||||||| | ||||| ||||||| ||| |||    |||||  ||||||||||    
T  3105341 aggagatgcaa--cttaaagcttcaaaagctgtttcaaggattcaaactcgtctaag-attgcagaagactggaaaagtattccaacggctattttgaaa 3105437  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||  |||| |||||||| || |||||  ||||||||||||| ||||    |||||||| |||||||||||||  |||||||||| || | |||||||    
T  3105438 ggattgaaaagtattggatggttattcttcaaagagcgttgacatagtatgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctct 3105537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 16940172 - 16940034
Alignment:
Q  36 aatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaaga 135  Q
    |||||||| || |||||||| | ||||| ||||||| ||| |||  |||||||| |||||||||||||||  || |||||| |||||| |||||  | ||    
T  16940172 aatggattcaaactcgtctaag-attgcagaagactggaaaagtatagcaacgactattttgaaaggattgaaaggcattgaatgcttattcttcaagga 16940074  T
Q  136 gcgttgacaaagtacaagtgtacgaaatgtacaaccacta 175  Q
    ||||||||| |||||   |||||||| |||||||||||||    
T  16940073 gcgttgacatagtacgtttgtacgaagtgtacaaccacta 16940034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 17398703 - 17398795
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  17398703 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactaactccactactctgtttttgtctctgct 17398795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 22190928 - 22190836
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||  |||||  ||||||||||||| |||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  22190928 gcattggatgctgattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgct 22190836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 41114707 - 41114863
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||||||||||||| |||||||||  | ||   ||||||  |||||||||||| ||||||||||  |||||  || | |||| || |||||||    
T  41114707 aagcttcaaaggttgttcaattgatttaatcaagcctgt-cattgcaaaagactagaagaatgaagcaacggctatttcaaatgaatttgaaggcattgg 41114805  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccacta 175  Q
    |||||| ||  ||| |||| ||||| |||| |||| ||||||   |||||||||||||    
T  41114806 atgcttttttgttggagagagttgaaaaaggacaattgtacgtcgtgtacaaccacta 41114863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 38513960 - 38513868
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||| |  |||||  ||||||||||||| ||||| | |||||||| |||||||||||||| | |||||||| || | ||||||||||    
T  38513960 gcattggatgttaattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactactttcactactctgtttttgtctctgct 38513868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 40860749 - 40860657
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||| ||  |||||||||||||| |||||||||| || | ||||||||||    
T  40860749 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtatgatgtgtacaaccactacttccactactctgtttttgtctctgct 40860657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 3499682 - 3499771
Alignment:
Q  112 cattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctg 201  Q
    |||||||||||  |||||  | ||||||||||| ||||||  |||||||| |||||||||||||| || ||||||| | || ||||||||    
T  3499682 cattggatgctatttcttcaatgagcgttgacatagtacatttgtacgaagtgtacaaccactacttctactactctgagtttgtctctg 3499771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 9751569 - 9751661
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||  |||||  ||||||||||||| ||||    || ||||| |||||||||||||| |||||||||| || | ||||||||||    
T  9751569 gcattggatgctaattcttcaaagagcgttgacatagtatgtttgcacgaagtgtacaaccactacttccactactctgtttttgtctctgct 9751661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 1672488 - 1672395
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||| || ||||| |||| || || | |||  |||| |||||||||| |||   |||||||| |||||||||||||| ||||||||||    
T  1672488 tttgaaaggacttaaaagctttgggtgtttatccttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactc 1672395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 1674963 - 1674870
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||| || ||||| |||| || || | |||  |||| |||||||||| |||   |||||||| |||||||||||||| ||||||||||    
T  1674963 tttgaaaggacttaaaagctttgggtgtttatccttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactc 1674870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 15475172 - 15475264
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||  || |  ||||||||||||| |||||   | |||||| |||||||||| ||| |||||||||| | || ||||||||||    
T  15475172 gcattggatgcttactcctcaaagagcgttgacatagtacgtttatacgaagtgtacaaccaatacttccactactctgagtttgtctctgct 15475264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 39419787 - 39419855
Alignment:
Q  135 agcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||| |||||   |||||||| |||||||||||||| |||| ||||| || | ||||||||||    
T  39419787 agcgttgacatagtacgtttgtacgaagtgtacaaccactacttccattactctgtttttgtctctgct 39419855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 14392966 - 14393168
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||||||||    
T  14392966 aggagatacaagacttaaagtttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaaacaacgactattttgaaa 14393065  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||| ||| |||||||||    
T  14393066 ggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtgtctct 14393165  T
Q  201 gct 203  Q
    |||    
T  14393166 gct 14393168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 49642724 - 49642926
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  49642724 aggagatgcaagacttaaagcttcaaaggttgttcaatagatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 49642823  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||| ||||||||| ||||||||||||||||||||| ||||| || |||||||||||||  ||||||||||||| |||||||||    
T  49642824 ggatttgaaggcattggatgattgttcttttaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatctccactactcagtttgtgtctct 49642923  T
Q  201 gct 203  Q
    |||    
T  49642924 gct 49642926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 2561385 - 2561183
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| | ||||||||||    
T  2561385 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaa 2561286  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||   |||||||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| || | |||||||    
T  2561285 ggatttgaagaaattggatgcttgttcttcaaagatcgttgacaaagtacaagtgtacgaagtgtacaaccactacctccactactctgtttttgtctct 2561186  T
Q  201 gct 203  Q
    |||    
T  2561185 gct 2561183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 37467530 - 37467328
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||||||| |||| ||||||  ||||||| ||||||||||||||||| ||||||||||    
T  37467530 aggagatgcaaaacttaaatcttcaaagcttgttcaatggatttaatctcatctaagcattgtagaagactggaagagtgaagcaacgactattttgaaa 37467431  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||||||| |||| |||||||||    
T  37467430 ggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactacccagtttgtgtctct 37467331  T
Q  201 gct 203  Q
    |||    
T  37467330 gct 37467328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 28582303 - 28582103
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||||| ||||||||||    
T  28582303 aggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctatgcattgcagaagattggaagagtgaagcaacgactattttgaaa 28582204  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| |  |||||||||||||||||||  ||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||| | |||||||    
T  28582203 ggatttaatggcattggatgcttgttcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactcagtttttgtctct 28582104  T
Q  201 g 201  Q
    |    
T  28582103 g 28582103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17238884 - 17239083
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| |||||| |||||||||||||| ||| ||||||||||    
T  17238884 aggagatgcaagacttaaagcttcaaaggctgatcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaagcatcgactattttgaaa 17238983  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||  ||||||||| ||| ||| |||||    
T  17238984 ggatttgaaagcattggatgattgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtatctct 17239083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 41495179 - 41494994
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    |||||||||||| |||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||| |||||||||||||||| || |||||||    
T  41495179 aagcttcaaaggctgttcaatggatttaatctcgtctaaacattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgg 41495080  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||||| ||||||    
T  41495079 atgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtatctgct 41494994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 15903396 - 15903196
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||| ||||||||||    
T  15903396 aggagatgcaagacttaaagcttcaaacgctgttcaatggattcaatctcgtctaagcattacagaagactagaagagtgaagcaacgactattttgaaa 15903297  T
Q  101 ggatttcaaagcattggatgc-ttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    |||||| ||||||||| |||| |||||||||||||||| |||||||||||||| |||||||| |||||||| ||||  ||||||||||||| ||||||||    
T  15903296 ggatttgaaagcattgcatgctttgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaacaactatctccactactcagtttgtgtctc 15903197  T
Q  200 t 200  Q
    |    
T  15903196 t 15903196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 20646352 - 20646149
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||| |||||||| | ||||||  |||||| |||||||||||||||||  |||||||||    
T  20646352 aggagatgcaagacttaaagctttaaaaggctgttcaatgtatttcatctcgtccaagcattgtagaagaccagaagagtgaagcaacgtctattttgaa 20646253  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||    
T  20646252 aggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactacctccactactcagtttgtgtctc 20646153  T
Q  200 tgct 203  Q
    ||||    
T  20646152 tgct 20646149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 38177605 - 38177791
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||| ||||| | ||||||||||||||| | ||||||||||    
T  38177605 aggagatgcaagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctgagcaatgcagaagattggaagagtgaagcaacaactattttgaaa 38177704  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  38177705 ggatttgaaggcattggatgcttgttctttaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 38177791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 13948533 - 13948334
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| ||||||| ||||||| ||| ||||||||||||| ||||||||||    
T  13948533 aggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgcagaagactggaatagtgaagcaacgactattttgaaa 13948434  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||  |||| |||||||  |||||||||    
T  13948433 ggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccattatctccattactcaggttgtgtctct 13948334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 6090929 - 6090727
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||   || |||||||    
T  6090929 aggagatgcaagacttaaaacttcaaaggttgctcaatggatttaatctcgtctaagcattgcagaagactagaagagtgaagcaacatctaatttgaaa 6090830  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||| ||||||||||||| || ||| |||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  6090829 ggatttgaaggcattgaatgcttgttctttaaaaagctttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 6090730  T
Q  201 gct 203  Q
    |||    
T  6090729 gct 6090727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12963047 - 12963249
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| ||| ||| ||||||| | ||||||||||||| | ||||||  ||    
T  12963047 aggagatgcaagacttaaagcttcaagggttgttcaagggatttaatcttgtctaagcaatgcagaagactgggagagtgaagcaacaactattttagaa 12963146  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    || ||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  12963147 ggttttgaaagcattggatgcttgttctttgaagagtgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtatgtgtctct 12963246  T
Q  201 gct 203  Q
    |||    
T  12963247 gct 12963249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18121584 - 18121786
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||| |  ||||||| ||||||| ||||||||||||||| | ||||||||||    
T  18121584 aggagatgcaagatttaaagcttcaaaggttgttcaatggattcaatctcgtttgagcattgcagaagactggaagagtgaagcaacaactattttgaaa 18121683  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||| |||||| |||||  ||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||| |||| |||||||    
T  18121684 ggatttaaaggcattgaatgctttttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtgtttgtctct 18121783  T
Q  201 gct 203  Q
    |||    
T  18121784 gct 18121786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 31303583 - 31303381
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| |||||||  |||||||||| ||| | ||||||||||    
T  31303583 aggagatgaaagacttaaagctttaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactgaaagagtgaaggaacaactattttgaaa 31303484  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||  |||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||  ||||||||||||| |||||||||    
T  31303483 ggatttgaagacatttgatgtttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactcagtttgtgtctct 31303384  T
Q  201 gct 203  Q
    |||    
T  31303383 gct 31303381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12726192 - 12726394
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||| ||||||||||||||||||||| | ||||||||||| ||||||||||| || |||| ||||||||||||||||||| ||||| ||||||||||    
T  12726192 aggagattcaagacttaaagcttcaaaggctattcaatggattcaatctcgtctaagctttgcagaagactagaagagtgaagtaacgactattttgaaa 12726291  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||  ||||| ||||| ||| ||||||||||| ||||| || |||||||||||||| |||||||||| || | |||||||    
T  12726292 ggatttgaaagcattggatgcttactctttaaagagagttaacaaagtacaattgtacaaagtgtacaaccactacctccactactctgtttttgtctct 12726391  T
Q  201 gct 203  Q
    |||    
T  12726392 gct 12726394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 16658580 - 16658782
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||| || |||||||||||||||||| |||| ||||||||| | ||||| |  ||||| |||  ||||||||||||| ||||||||||    
T  16658580 aggagatgcaagacttgaaacttcaaaggttgttcaattgattcaatctcgtccaagcattacaaaagaccagagcagtgaagcaacgactattttgaaa 16658679  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| |||||||||||||||| |||||||||||||||||||| | ||||| |||||||| |||||||||||||| ||||||||| ||| |||||||||    
T  16658680 ggatttgaaagcattggatgcttattctttgaagagcgttgacataatacaattgtacgaagtgtacaaccactacctccactacttagtttgtgtctct 16658779  T
Q  201 gct 203  Q
    |||    
T  16658780 gct 16658782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 30 - 203
Target Start/End: Original strand, 13780575 - 13780748
Alignment:
Q  30 ttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctt 129  Q
    |||||||||| ||||||||||||||| ||||||| |||||||  |||||||||||||||| |||||||||||||||| || |||||||||||||||| ||    
T  13780575 ttgttcaatgaatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttatt 13780674  T
Q  130 tgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||  ||||| ||||||| ||||||||||||    
T  13780675 tgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccacgactcagtttgtgtctctgct 13780748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 29951410 - 29951602
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| ||| |||||||||||| | |||||||||||||||| ||     
T  29951410 agacttaaagcttcaaaggtttttcaatggatttaatctcgtctaagcattgtagaagaccagaggagtgaagcaacaactattttgaaaggatttgaag 29951509  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||| || |||||||||||||  ||||| ||||||| || |||||||||    
T  29951510 gcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatctccaccactcagtttgagtctctgct 29951602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 30000564 - 30000756
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| ||| |||||||||||| | |||||||||||||||| ||     
T  30000564 agacttaaagcttcaaaggtttttcaatggatttaatctcgtctaagcattgtagaagaccagaggagtgaagcaacaactattttgaaaggatttgaag 30000663  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||| || |||||||||||||  ||||| ||||||| || |||||||||    
T  30000664 gcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatctccaccactcagtttgagtctctgct 30000756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18142714 - 18142916
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||| ||||||||||||||| | ||||||||||| |||||||| |  ||||||| ||||||| ||||||||||||||| | ||||||||||    
T  18142714 aggagatgcaagatttaaagcttcaaaggctattcaatggattcaatctcgtttgagcattgcagaagactggaagagtgaagcaacaactattttgaaa 18142813  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||| |||||| |||||  ||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||| |||| |||||||    
T  18142814 ggatttaaaggcattgaatgctttttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtgtttgtctct 18142913  T
Q  201 gct 203  Q
    |||    
T  18142914 gct 18142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 13824263 - 13824091
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||  ||||||| ||||||||||||||| | |||||||||| ||    
T  13824263 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaaacaatgaagaagactggaagagtgaagcaacaactattttgaaatga 13824164  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactac 176  Q
    ||| || |||||||||| ||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||    
T  13824163 tttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactac 13824091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 14969524 - 14969341
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||| | ||||||||||    
T  14969524 aggatatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtaaagcaacaactattttgaaa 14969425  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccacta 184  Q
    |||||| |  ||||||||||||| |||||  || |||||||||||||||||  | |||||| |||||||||||||  |||||||    
T  14969424 ggatttgatggcattggatgcttattcttcaaatagcgttgacaaagtacatttttacgaagtgtacaaccactatctccacta 14969341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 40800056 - 40799869
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||| || |||||||||| || |||||||| |||| || | |||    
T  40800056 taaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagcgaagcaacgactagtttgaaagtatttgaaggaatt 40799957  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||| |||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  40799956 ggatacttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 40799869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 16032711 - 16032520
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||||||||||| ||||||||||  | |||  || ||| |||||| || |||||| | |||||| |||||||||||||||| ||     
T  16032711 agacttaaagcttcaaaggttgttcaaaggatttaatcatgcctat-cactgcagaagaccaggagagtgtatcaacgactattttgaaaggatttgaag 16032613  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  16032612 gcattggatgcttgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 16032520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 47207889 - 47207717
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctac-gcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||| ||||||||||||  || ||||||| ||||| || ||||    
T  47207889 taaaacttcaaaggttgttcaatggatttaatctcgtctaaagcattgcagaagactggaaaagtgaagcaacggctagtttgaaatgatttgaaggcat 47207790  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  47207789 tggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 47207717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 52920602 - 52920419
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| | || ||| |||    
T  52920602 aggagatgcaagacttaaagtttcaaaggctgctcaatggatttaatctcgtctaagcattgcagaagactagaagagtgaagcaacaactaattt-aaa 52920504  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactac 185  Q
    | |||| || ||||| |||||||||||||| ||||||||||||||| || || |||||||| | |||||||||||| || |||||    
T  52920503 gtatttgaaggcatttgatgcttgttctttaaagagcgttgacaaattaaaattgtacgaagtatacaaccactacctctactac 52920419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 47405398 - 47405585
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||| | ||||||||| | || ||||||||||||| || |||||    
T  47405398 taaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaaaaatgaagcaacaactagtttgaaaggatttgaaggcatt 47405497  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
     |||| ||||||||  ||||| ||||||||||||||| |||||||| |||||||||||||| |||||||||  || | ||||||||||    
T  47405498 tgatgtttgttcttcaaagagtgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactatgtttttgtctctgct 47405585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 203
Target Start/End: Original strand, 19888908 - 19889107
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggt-tgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaag 101  Q
    ||||||||||||||||||||| ||| |  ||||||||||||| ||||||||| | |||||||  ||||| ||| |||||||||||||| |||||||||||    
T  19888908 gagatgcaagacttaaagcttaaaaagactgttcaatggattcaatctcgtccaagcattgcaaaagaccagatgagtgaagcaacgactattttgaaag 19889007  T
Q  102 gatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctg 201  Q
    ||||| |||||||||||||||||||||||||| ||  |||||| | ||||| |||||||| |||||||||||||  |||||  |||||| ||||||||||    
T  19889008 gatttgaaagcattggatgcttgttctttgaataggattgacatattacaattgtacgaagtgtacaaccactatctccac--ctcagtttgtgtctctg 19889105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 49553451 - 49553637
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||| |||||||| |||| ||| |||||||  ||||||| ||||||| ||||| |  ||||||||||||  || ||||||||||    
T  49553451 aggagatgcaagacttaaagtttcaaaggctgtttaatagatttaacatcgtctaagcattgcagaagattgaaagagtgaagcagtgactattttgaaa 49553550  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||| ||||||||   |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  49553551 ggatttgaaggcattggatgtttgttcttcagagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 49553637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 11223742 - 11223574
Alignment:
Q  19 agcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgga 118  Q
    ||||||||| | |||||||||| || ||||||||||| ||||||| |||||||  || ||||||||||||| |||||||||||||||| || ||||||||    
T  11223742 agcttcaaaagctgttcaatgggttcaatctcgtctatgcattgcagaagactgaaaaagtgaagcaacgactattttgaaaggatttgaaggcattgga 11223643  T
Q  119 tgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||  ||||||||||||||||||    |||||||| |||||||||||||  ||||||||||    
T  11223642 tgcttgttcttcaaagagcgttgacaaagtatgtttgtacgaagtgtacaaccactatctccactactc 11223574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 12388845 - 12389035
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||| | ||||| |||||  |||| |||||||| |||| || ||  |||| |||| ||     
T  12388845 agacttaaagcttcaaaggttgttcaaaggatttaatcatgtcta-gaattgcagaagatcagaacagtgaagctacgactaattcaaaagaattttaag 12388943  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    ||||||||||||| ||||||||||||||||| ||||| |||| |||||||| |||||||||||||| |||||||||| || | |||||||||    
T  12388944 gcattggatgcttcttctttgaagagcgttggcaaaggacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgc 12389035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 24775498 - 24775698
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| || ||||| || ||||||||   ||||| ||||||| ||| ||||||||||| | ||||||||||    
T  24775498 aggagatgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtgaagcaacaactattttgaaa 24775595  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||| |||||| |||||  |||||| ||||||||||||   |||||||| ||||||||||||||||||||||||| || | |||||||    
T  24775596 ggatttgaaggcattgaatgcttattcttcaaagagctttgacaaagtacgtttgtacgaagtgtacaaccactacatccactactctgtttttgtctct 24775695  T
Q  201 gct 203  Q
    |||    
T  24775696 gct 24775698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 22804049 - 22804187
Alignment:
Q  65 gaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatg 164  Q
    |||||| |||||||||||||||||  ||||||||||||| || || ||||| |||| ||||||||||||||||||||||||||||||| |||||||| ||    
T  22804049 gaagaccagaagagtgaagcaacggctattttgaaaggacttgaaggcattcgatgattgttctttgaagagcgttgacaaagtacaattgtacgaagtg 22804148  T
Q  165 tacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    || ||||||||  ||||||||||| | ||||||||||||    
T  22804149 taaaaccactatctccactactcaatttgtgtctctgct 22804187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 53056701 - 53056891
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||| | |||||| | |||| |||||||| ||  |||||||   ||||| ||||||| ||| ||||||||||||| |||||||||||||||| || ||    
T  53056701 acttaaggtttcaaaagctgtttaatggattcaacatcgtctaaagattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggc 53056800  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||  ||||||||| |||||||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  53056801 attggatgcttgttcttcaaagagcgtttacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 53056891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 46349826 - 46349991
Alignment:
Q  21 cttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatg 120  Q
    ||||||| |||||||||| |||  ||||||||||| ||||||| ||||||| ||| ||||||||||||| || ||||||||||||| || ||||||||||    
T  46349826 cttcaaaagttgttcaattgatccaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactaatttgaaaggatttgaaggcattggatg 46349925  T
Q  121 cttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    |||||||||   ||| | |||||||||||| | |||||||| |||||||||||| | |||||||||    
T  46349926 cttgttcttcagagaacattgacaaagtacgattgtacgaagtgtacaaccactgcctccactact 46349991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 20627395 - 20627578
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| |||||||| || ||||||||   ||||| ||||||| ||| ||||||||||| | |||||||||     
T  20627395 aggagatgcaa--cttaaagcttcaaaagatgtttaatggattcaaactcgtctaatgattgcagaagactggaaaagtgaagcaacaactattttgaat 20627492  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    |||||| || ||||||||||||||||  |  |||||||||||||||||||   |||||||| |||||||||||||| |||||||||    
T  20627493 ggatttgaaggcattggatgcttgtttatcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactact 20627578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 2785260 - 2785075
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| |||||| || ||||| || ||||||||   ||||| ||||||| ||| ||||||||||| | ||||||||||    
T  2785260 aggagatgcaa--cttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtgaagcaacaactattttgaaa 2785163  T
Q  101 ggatttcaaagcattggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||||||||| ||   ||||||||||||| |||||   |||||||| |||||||||||||| ||||||||||    
T  2785162 ggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactc 2785075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 19249385 - 19249547
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    |||||||||||||||||||||||||||  ||||||||| || ||| ||||||| |||||| ||||||||||||||||   || ||  ||||||||| ||     
T  19249385 agacttaaagcttcaaaggttgttcaaacgatttaatcacgccta-gcattgcagaagaccagaagagtgaagcaacagctaattcaaaaggatttgaag 19249483  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccact 174  Q
    |||||||||| ||||||||||||||||| ||| | || |||| |||||||| ||||||||||||    
T  19249484 gcattggatgtttgttctttgaagagcgctgaaataggacaattgtacgaagtgtacaaccact 19249547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22140959 - 22140759
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  ||||||| |||||| | ||||||| ||||| || |||| ||| | ||||| ||||||||||  |||||| |||||| |||||||||     
T  22140959 aggagatgcaa--cttaaagtttcaaaagctgttcaacggattcaaactcgcctaaggattgcagaagactagataagtgaaccaacgactattttgaag 22140862  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    || ||| ||| ||||||||||||||||||  ||||||||||||| |||||   |||||||| |||| ||||||||| |||||||||| || | |||||||    
T  22140861 ggttttgaaaacattggatgcttgttcttcaaagagcgttgacatagtacgtatgtacgaagtgtataaccactacctccactactctgtttttgtctct 22140762  T
Q  201 gct 203  Q
    |||    
T  22140761 gct 22140759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 20725269 - 20725098
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    ||||||||||||||| |||||||  ||| ||||| |||||| ||||||| |||||| |||||||||||||||||| || ||  ||||||||| ||  |||    
T  20725269 ttaaagcttcaaaggctgttcaaaagatctaatcacgtcta-gcattgcagaagaccagaagagtgaagcaacgactaattcaaaaggatttgaagacat 20725171  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||  |||||||||||||| |||| |||| |||||||| |||||||  ||||  ||||||||||    
T  20725170 tggatgcttgtttcttgaagagcgttgaaaaaggacaattgtacgaagtgtacaataactatctccactactc 20725098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 14955608 - 14955438
Alignment:
Q  17 aaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattg 116  Q
    ||||||||||| | |||| |||||||| || ||||||||   ||||| ||||||| |||  || ||||||| | ||||||||||| |||| || ||||||    
T  14955608 aaagcttcaaaagctgtttaatggattcaaactcgtctaaagattgcagaagactggaaaggtaaagcaacaactattttgaaagtatttgaaggcattg 14955509  T
Q  117 gatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||| |||||  |||||||||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  14955508 gatgcttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 14955438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 25398238 - 25398419
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||                  || | ||||||||||| |||||||||||||    
T  25398238 agatgcaagacttaaagcttcaaaggttgttcaatgaatttaatctcgtcta------------------aacaatgaagcaacgactattttgaaagga 25398319  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| || |||||| ||  ||| ||||  |||||||||||||||| |||| |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  25398320 tttgaaggcattgcatatttgctcttcaaagagcgttgacaaagcacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 25398419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 33583416 - 33583240
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatgg-atttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaag 111  Q
    |||||| |||||||| ||||||  |||| ||| || || ||||| | ||||  ||||||| ||| ||||||||||||  |||||||||||||||| || |    
T  33583416 acttaaggcttcaaaagttgttttatgggattcaaccttgtctaaggattgtagaagactggaaaagtgaagcaacggctattttgaaaggatttgaacg 33583317  T
Q  112 cattggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||||| ||   |||||||||||||||||||   |||||||| |||||||||||||| |||| |||||    
T  33583316 cattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccaatactc 33583240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 29855587 - 29855420
Alignment:
Q  21 cttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaaga-gtgaagcaacgaatattttgaaaggatttcaaagcattggat 119  Q
    ||||||| | |||| |||||||| || ||||||||   ||||| |||||||| || | |||||||||||  || |||||||| |||| || |||||||||    
T  29855587 cttcaaaagctgtttaatggattcaacctcgtctaaagattgcagaagactaaaaaaagtgaagcaacggctagtttgaaagaatttgaaggcattggat 29855488  T
Q  120 gcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||  || |||||||||| |||||   |||||||| |||||||||||||| ||||||||||    
T  29855487 gcttgttcttcaaaaagcgttgacagagtacgtttgtacgaagtgtacaaccactacctccactactc 29855420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 12968485 - 12968317
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||||||||| ||  | ||||||| | ||||  |||||| ||||||||||||  ||||| ||||| || ||  |||| |||| || |||||||    
T  12968485 aagcttcaaaggttgtttaaatgttttaatcacatctat-cattgcagaagactagaagcatgaagtaacgactaattcaaaagaatttgaaggcattgg 12968387  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    || ||| ||||||||||| |||||  |||| |||| | |||||| |||||||||||||  ||||||||||    
T  12968386 atacttattctttgaagaacgttggaaaaggacaattatacgaagtgtacaaccactatctccactactc 12968317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 11869253 - 11869137
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||| ||||||||  ||||| |||| ||| ||||||||||| | | | | ||||||| ||| ||||||||||||  || ||||||||||||| || ||    
T  11869253 acttaaggcttcaaaatttgtttaatgaattcaatctcgtctaagaaatacagaagactggaaaagtgaagcaacgtctagtttgaaaggatttgaaggc 11869154  T
Q  113 attggatgcttgttctt 129  Q
    |||||||||||||||||    
T  11869153 attggatgcttgttctt 11869137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 21636742 - 21636834
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  21636742 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgct 21636834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 11868335 - 11868264
Alignment:
Q  132 aagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||||||| | |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  11868335 aagagcgttgacaaagtacgattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 11868264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 23538146 - 23538312
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||| ||||||||  | ||||||| || |||  |||||| ||||||| ||||| |||| |||||  |||||  |||| |||| || ||||||     
T  23538146 aagcttcaaagtttgttcaaatgttttaatcacgcctat-cattgcagaagactggaagaatgaaacaacggttatttcaaaagaatttgaaggcattga 23538244  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactac 185  Q
    |||||| ||||||  ||| |||||| |||| |||| |||||||| |||||||||||||  ||||||||    
T  23538245 atgcttattctttagagaacgttgaaaaaggacaattgtacgaagtgtacaaccactatctccactac 23538312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 11909079 - 11909171
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    ||||||||||||| || ||||||||||||| | |||  |||||||||||||||||||   | |||||| ||||| |||||||| |||||||||    
T  11909079 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctttacgaagtgtacgaccactacctccactact 11909171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 5213771 - 5213588
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| || ||||| || ||||| ||   ||||| ||||||| ||| |||  |||||| | ||||||| ||    
T  5213771 aggagatgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtataaagattgcagaagactggaaaagtatagcaacaactattttggaa 5213674  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || ||||| ||||||| ||  || || |||||||||  |||||   |||||||| |||||||||||||| ||||||||||    
T  5213673 ggatttgaaggcattagatgcttatt-attcaaaagcgttgacgtagtacgtttgtacgaagtgtacaaccactacctccactactc 5213588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 21641000 - 21640878
Alignment:
Q  65 gaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatg 164  Q
    ||||||| ||| |||  |||||||  ||||||| |||||||  |||||||||||||||| || ||  ||||||||||||| |||||   | |||||| ||    
T  21641000 gaagactggaaaagtatagcaacggctattttggaaggattgaaaagcattggatgcttatttttcaaagagcgttgacatagtacgtttttacgaagtg 21640901  T
Q  165 tacaaccactacatccactactc 187  Q
    |||||||||||  ||||||||||    
T  21640900 tacaaccactatctccactactc 21640878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 21605726 - 21605818
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| | |||   |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  21605726 gcattggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 21605818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 30054310 - 30054381
Alignment:
Q  132 aagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||   ||||||||||||||||||||||  |||||||||| || | ||||||||||    
T  30054310 aagagcgttgacatagtacgtttgtacgaaatgtacaaccactaactccactactctgtttttgtctctgct 30054381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 26417659 - 26417815
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||| ||||||||  | ||||||| || |||  |||| | ||||||||||||| ||||||||||  || ||  |||| |||| || |||||||    
T  26417659 aagcttcaaagtttgttcaaatgttttaatcacgcctat-cattccagaagactagaagaatgaagcaacggctaattcaaaagaatttgaaggcattgg 26417757  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccacta 175  Q
    |||||  ||||||| ||| |||||  |||  |||| ||||| || |||||||||||||    
T  26417758 atgctcattctttggagaacgttggaaaatgacaattgtacaaagtgtacaaccacta 26417815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 45858804 - 45858860
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtac 150  Q
    ||||||||||||| || ||||||||||||| | |||  |||||||||||||||||||    
T  45858804 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtac 45858860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 176
Target Start/End: Complemental strand, 50300372 - 50300245
Alignment:
Q  49 tcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgtt-ctttgaagagcgttgacaaag 147  Q
    ||||||| | ||||| ||||||| ||| |||||||||||   || |||||| |||||| || ||||||||||  |||| ||   ||||||||||||||||    
T  50300372 tcgtctaaggattgcagaagactggaaaagtgaagcaactgcta-tttgaagggatttgaacgcattggatgtatgttcctcaaaagagcgttgacaaag 50300274  T
Q  148 tacaagtgtacgaaatgtacaaccactac 176  Q
    |||   |||||||| ||||||||||||||    
T  50300273 tacgtttgtacgaagtgtacaaccactac 50300245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 51341107 - 51341040
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtac-aagtgtacga 160  Q
    |||||||||| || || ||||||||||||| | |||  ||||||||||||||||||| ||||||||||    
T  51341107 tttgaaaggaattgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgaagtgtacga 51341040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 40851055 - 40850990
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactac 176  Q
    ||||||||||||| |||||  ||||||||||||| ||||    |||||||| ||||||||||||||    
T  40851055 gcattggatgcttattcttcaaagagcgttgacatagtatgtttgtacgaagtgtacaaccactac 40850990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 49666379 - 49666480
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| ||||||  | ||||| || |||||||| | ||||| ||||||| ||| |||  | |||||| ||||||||||    
T  49666379 aggagatgcaa--cttaaagcttcaaaagttgtttcaaggattcaaactcgtctaag-attgcagaagactggaaaagtataacaacgactattttgaaa 49666475  T
Q  101 ggatt 105  Q
    |||||    
T  49666476 ggatt 49666480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 46796439 - 46796531
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||| ||| ||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||  || | ||||||||||    
T  46796439 gcattagatacttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactttgtttttgtctctgct 46796531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 7e-76; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 44467259 - 44467056
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||    
T  44467259 aggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactagaagagtgaagcaacgactattttgaa 44467160  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||| || |||||||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||| |||||||||| || | ||||||    
T  44467159 aggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctc 44467060  T
Q  200 tgct 203  Q
    ||||    
T  44467059 tgct 44467056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 13303004 - 13302802
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||| ||||||||||    
T  13303004 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatatcgtctaagcattgtagaagactagaagagtgaagcaacgactattttgaaa 13302905  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||| |||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||   |||||||||||| |||||||||    
T  13302904 ggatttgaaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatcaccactactcagtttgtgtctct 13302805  T
Q  201 gct 203  Q
    |||    
T  13302804 gct 13302802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 10883137 - 10883339
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| | ||||||| ||||||||||||||||| ||||||||||    
T  10883137 aggagatgcaagacttaaagtttcaaaggttgttcaatggatttaatctcgtctaatcatttcagaagactggaagagtgaagcaacgactattttgaaa 10883236  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||||||||||||| || ||||||    
T  10883237 ggatttgaaggcattggatgcctgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaatcactacctccactactcagtttgcgtctct 10883336  T
Q  201 gct 203  Q
    |||    
T  10883337 gct 10883339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 15088714 - 15088513
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||| ||||||||||    
T  15088714 aggagatgcaagacgtaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaacgactattttgaaa 15088615  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||  ||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  15088614 ggatttgaagacattggatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 15088515  T
Q  201 gc 202  Q
    ||    
T  15088514 gc 15088513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 13730639 - 13730839
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||  ||||||||||    
T  13730639 aggagatgcaaggcttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcataagactaaaagagtgaagcaacggctattttgaaa 13730738  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
     ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||  ||||||||||||| |||||||||    
T  13730739 agatttgaatgcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccattatctccactactcagtttgtgtctct 13730838  T
Q  201 g 201  Q
    |    
T  13730839 g 13730839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 21695593 - 21695393
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| |||||  ||| |    
T  21695593 gagatgcaagacttaaagcttcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaagcaacgactatttcaaaatg 21695494  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  21695493 atttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccagtacctcaactactcagtttgtgtctctgc 21695394  T
Q  203 t 203  Q
    |    
T  21695393 t 21695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 2500232 - 2500030
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| | ||||||||||    
T  2500232 aggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaa 2500133  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| |||||||||||||||| | |||||||||| ||||||||||||||| ||||| || ||||||||||||   ||||||||||||| |||||||||    
T  2500132 ggatttgaaagcattggatgcttatcctttgaagagagttgacaaagtacaattgtacaaagtgtacaaccactttctccactactcagtttgtgtctct 2500033  T
Q  201 gct 203  Q
    |||    
T  2500032 gct 2500030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21692481 - 21692279
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||| ||| |||||||  ||||||||| |||| ||||||| |||||| |||||||||||||||||| | ||||||||    
T  21692481 aggagatgcaagacttaaagcttcaaaagttattcaatgattttaatctcttctaagcattgcagaagaccagaagagtgaagcaacgactgttttgaaa 21692382  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||| |||||||||    
T  21692381 ggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactcagtttgtgtctct 21692282  T
Q  201 gct 203  Q
    |||    
T  21692281 gct 21692279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 2913572 - 2913774
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||  || ||| ||||||||||| |||| |||||||| ||||||||||    
T  2913572 aggagatgcaagacttaaatcttcaaaggctgttcaatgaatttaatctcatctaaacaatgcagaagactagaaaagtggagcaacgactattttgaaa 2913671  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  2913672 ggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 2913771  T
Q  201 gct 203  Q
    |||    
T  2913772 gct 2913774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 11793101 - 11792899
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||  ||||| | |||||||||||||||| ||||||||||    
T  11793101 aggagatgcaagacttaaagctttaaaggttgttcaatggacttaatctcgtctaagcattgcgaaagaccataagagtgaagcaacgactattttgaaa 11793002  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    | |||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||| ||| ||| |||||||||    
T  11793001 gcatttgaaagcatttgatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccaccacttagtttgtgtctct 11792902  T
Q  201 gct 203  Q
    |||    
T  11792901 gct 11792899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 13137859 - 13138061
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| |||||||  |||||||||||||| | ||||||||||    
T  13137859 aggagatgcaagacttaaagcttcaaaggttaatcaatggatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaacaactattttgaaa 13137958  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
     ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||| |||||||| | |||||||    
T  13137959 agatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccattactcagtttatgtctct 13138058  T
Q  201 gct 203  Q
    |||    
T  13138059 gct 13138061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 24788335 - 24788136
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  24788335 aggagatgcaagacttaaagcttcaaaggttgttcaatagatttaatatcatctaagcattgcagaagactagaagagtgaagcaacgaatattttgaaa 24788236  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||| |||||||||||  |||||  |||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  24788235 ggatttgaaggcattgggtgcttgttcttcaaagagaattgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 24788136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 9069756 - 9069554
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  9069756 aggagatgcaaaacttaaagcttcaaaggttgttcaagggatttaatatcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 9069657  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||| ||||||||||||  | |||| |||||||||||||| |||||||| |||||||||||||| ||||||||||||| | |||||||    
T  9069656 ggatttaaaggcattgtatgcttgttcttcaaggagcattgacaaagtacaattgtacgaagtgtacaaccactacctccactactcagtttttgtctct 9069557  T
Q  201 gct 203  Q
    |||    
T  9069556 gct 9069554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 16316525 - 16316723
Alignment:
Q  5 gatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||| |||||| ||||||||||||||||   ||||||||||||||    
T  16316525 gatgcaagacttaaagcttcaaaggttgttcaatggatttaatcacgtctaagaattgcagaagaccagaagagtgaagcaacagctattttgaaaggat 16316624  T
Q  105 ttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    || ||  ||||||||||||||||||||||||||||||| | ||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||||    
T  16316625 ttgaagccattggatgcttgttctttgaagagcgttgaaatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 16316723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 28409231 - 28409034
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| | ||||||||||||    
T  28409231 gagatgcaagacataaggcttcaaaggttgttcaatggatttaatctcgtctaaacattgcagaagactagaagagtgaagcaacaattattttgaaagg 28409132  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||| || |||||||||| ||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  28409131 atttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 28409034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 7 - 203
Target Start/End: Complemental strand, 13880292 - 13880096
Alignment:
Q  7 tgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggattt 106  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||| ||||||| || |||||||||||||| ||||||||||||||||    
T  13880292 tgcaagacataaagcttcaaaggctgttcaatggacttaatctcgtctaagcattgcagaagactcgacgagtgaagcaacgactattttgaaaggattt 13880193  T
Q  107 caaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
     || ||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||| | ||||||||||||    
T  13880192 gaaggcattagatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcactttgtgtctctgct 13880096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 21283337 - 21283536
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||   |||||||||    
T  21283337 aggatatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtaaagcaacgtccattttgaaa 21283436  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||| ||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  21283437 ggatttgaaggcattggatgcttgttattcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 21283536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12366712 - 12366914
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||| ||||| |||||||||||||| || |||||||||||||||||||||| || ||||||| ||||||| | ||||||||||||| | ||||||||||    
T  12366712 aggaggtgcaaaacttaaagcttcaagggctgttcaatggatttaatctcgtttaagcattgcagaagactgggagagtgaagcaacaactattttgaaa 12366811  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| |||||||||||||  |||||||||||||||||||||| ||||||| |||||||| | |||||||||||| ||||||| ||||| |||||||||    
T  12366812 ggatttgaaagcattggatgtctgttctttgaagagcgttgacatagtacaattgtacgaagtatacaaccactacctccactaatcagtctgtgtctct 12366911  T
Q  201 gct 203  Q
    |||    
T  12366912 gct 12366914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 13648923 - 13648721
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||||| |||||| ||||||| |||||||  |||||||||||||||  ||||||||||    
T  13648923 aggagatgcgagacttaaagcttcaaaagatgttcaatggatttaatcgcgtctaagcattgcagaagactgaaagagtgaagcaacggctattttgaaa 13648824  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||  ||||||||||||| ||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||| | |||||||||    
T  13648823 ggatttaaagacattggatgcttgatctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcaatttgtgtctct 13648724  T
Q  201 gct 203  Q
    |||    
T  13648723 gct 13648721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22577985 - 22578187
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||| || ||||||| |||||||  |||||||||||||| | ||||||||||    
T  22577985 aggagatgcaagacttaaagcttcaaagggtgttcaatagatttaatctcgtttaagcattgcagaagactgtaagagtgaagcaacaactattttgaaa 22578084  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||| ||| ||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  22578085 ggatttgaaggcattgaatgattgttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 22578184  T
Q  201 gct 203  Q
    |||    
T  22578185 gct 22578187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 33691676 - 33691878
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  33691676 aggagatgcaagacataaagcttcaaaggctgttaaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 33691775  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    | |||| || || || |||||||||||||  ||||||||||||||||||||| |||||||| |||| ||||||||| |||||||||| || | |||||||    
T  33691776 gaatttaaaggcgttagatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccactacctccactactctgtttttgtctct 33691875  T
Q  201 gct 203  Q
    |||    
T  33691876 gct 33691878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 15468110 - 15467924
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||| ||| ||||||| |||||||||| |||||| |||||| |||    
T  15468110 aggagatgcaagacttaaagcttcaaagggtgttcaatagatttaatctcgtctaggcaatgcagaagactggaagagtgaatcaacgactattttaaaa 15468011  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||  |||||||||| ||| ||||||||||    
T  15468010 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaggtgtacaaccattacctccactactc 15467924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 11319597 - 11319400
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||  |||||||||| ||| | ||||||||||||    
T  11319597 gagatgcaagacttcaagcttcaaaggatgttcaatggatttaatcttgtctaagcattgcagaagactgaaagagtgaagtaacaactattttgaaagg 11319498  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||| || ||||||||||| |||| ||||||||||||||||||| ||||| || ||||| |||||||||||||  ||||||||||||| |||||||||    
T  11319497 atttgaatgcattggatgcgtgttttttgaagagcgttgacaaattacaattgcacgaagtgtacaaccactatctccactactcagtttgtgtctct 11319400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 29935323 - 29935524
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||  |||||||||||||||||  |||||||| |   ||  |||||| |||||| |||||||||||||||||| ||||||||||    
T  29935323 aggagatgcaagacttaaaatttcaaaggttgttcaatatatttaatcacacttaa-cattgcagaagaccagaagagtgaagcaacgactattttgaaa 29935421  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||| ||| |||||||||    
T  29935422 ggatttgaaagcattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtgtctct 29935521  T
Q  201 gct 203  Q
    |||    
T  29935522 gct 29935524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 5000788 - 5000985
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaaga-gtgaagcaacgaatattttgaaagg 102  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| | | |||||||  ||||| |  ||| |||||||||||| ||||||||||||    
T  5000788 agatgcaagacttagagcttcaaaggttgttcaatggattcaatctcgcccaagcattgcaaaagaccaagagaagtgaagcaacgactattttgaaagg 5000887  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||| ||||||||| |||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  5000888 atttgaaagcattgaatgcttgttctttgaagaacgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 5000985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 30944289 - 30944489
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||| | ||| ||||||||||| | ||||||||||    
T  30944289 aggagatgcaa--cttaaagcttcaaaggttgttcaacggatttaatctcgtctaagtattgcagaagattggaaaagtgaagcaacaactattttgaaa 30944386  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||||||||| |||||  ||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  30944387 ggatttgaaggcattggatgcttattcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 30944486  T
Q  201 gct 203  Q
    |||    
T  30944487 gct 30944489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 9709781 - 9709968
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||  || ||||||||||||| || |||||    
T  9709781 taaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgcctagtttgaaaggatttgaaggcatt 9709880  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
     |||||||||||||  ||||||||||||| ||||||| |||||||| |||| |||||||||||||||| ||| || | ||||||||||    
T  9709881 agatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccactacatccactgctctgtttttgtctctgct 9709968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 19237022 - 19237204
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||| |||||||||||||||||  || ||||||||||||| || ||||    
T  19237022 ttaaagcttcaaaggctgttcaaaggatttaatctcgtcta-gcattgcagaagaccagaagagtgaagcaacggctactttgaaaggatttgaaggcat 19237120  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtct 198  Q
    |||||||||||||||  ||||||||||||||| ||||| | |||||| |||||||||||||| |||||||||| || |||||||    
T  19237121 tggatgcttgttcttcaaagagcgttgacaaactacaattatacgaagtgtacaaccactacctccactactctgtttgtgtct 19237204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 30945322 - 30945505
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||| | ||||  ||||| | ||| ||||||||||| | ||||||||||    
T  30945322 aggagatgcaa--cttaaagcttcaaaggttgttcaacggatttaatctcgtctaagtattgtagaagattggaaaagtgaagcaacaactattttgaaa 30945419  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    |||||| || ||||||||||||||||| |  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  30945420 ggatttgaaggcattggatgcttgttcctcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 30945505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 30026097 - 30025897
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||||||||||||||||| | || |||||||||||| |||||| || |||| || |||||||  |||||||||||||||  |||||||||| |    
T  30026097 gagatgcaagacttaaagcttcaaacgctggtcaatggatttagtctcgtataagcatcgcagaagactgaaagagtgaagcaacggctattttgaaaag 30025998  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    | || || ||||| |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| ||  || |||||||||| |||||||||||    
T  30025997 aattgaaggcattcgatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccaatatctctactactcagtttgtgtctctgc 30025898  T
Q  203 t 203  Q
    |    
T  30025897 t 30025897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 39284545 - 39284727
Alignment:
Q  17 aaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattg 116  Q
    ||||||||||||| ||||||| |||||||||| || ||| |||||||||||||| ||||||||||| |||||| || ||  || | |||| || ||||||    
T  39284545 aaagcttcaaaggctgttcaaaggatttaatcacgccta-gcattgctgaagaccagaagagtgaaacaacgactaattcaaatgaatttgaaggcattg 39284643  T
Q  117 gatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||||    
T  39284644 gatgtttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcagtttgtgtctct 39284727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 23279923 - 23280108
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||| ||||| ||||||  ||||||| ||| |||| |||||||  || |||||||    
T  23279923 aggagatgcaagacttaaagcttcaaaggctattca-tggatttaatcttgtctaagcattgtagaagactggaaaagtggagcaacggctagtttgaaa 23280021  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||    
T  23280022 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 23280108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 28622322 - 28622522
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||| ||||||| ||||||||||||  || |||||||    
T  28622322 aggagatgcaa--cttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcattgcagaatactagaaaagtgaagcaacggctaatttgaaa 28622419  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||| ||||| ||  ||| ||||||||||||||||| |||||||  |||||||||||||| || ||| ||| || | |||||||    
T  28622420 ggatttgaaggcattggatgtttgtttttcaaagggcgttgacaaagtacaattgtacgaggtgtacaaccactacctctacttctctgtttttgtctct 28622519  T
Q  201 gct 203  Q
    |||    
T  28622520 gct 28622522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 48236868 - 48237068
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| ||||||||||||||| ||||||||||| |||||||  ||||||  ||  ||||||||||||  | |||||||    
T  48236868 aggagatgcaa--cttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcattgcataagactgaaaaggtgaagcaacgacaagtttgaaa 48236965  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||  ||||||| |||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||  || | |||||||    
T  48236966 ggatttgaaggcatcagatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactttgtttttgtctct 48237065  T
Q  201 gct 203  Q
    |||    
T  48237066 gct 48237068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 13018479 - 13018671
Alignment:
Q  11 agacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaa 109  Q
    ||||||||||||||||| || |||||||||||||||||| || | | | ||||| ||||||||| ||||||||||||||| |||||| || | | || ||    
T  13018479 agacttaaagcttcaaaaggctgttcaatggatttaatcacgccca-gtattgcagaagactaggagagtgaagcaacgactattttaaatgaagttgaa 13018577  T
Q  110 agcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
     |||||||||||| | | ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| ||||||| ||||    
T  13018578 ggcattggatgctggatttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctgtgct 13018671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 13692533 - 13692372
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||| | |||||||||||      
T  13692533 agatgtaagacttaaagcttcaaaggttgttcaatggatttaatctcgtataagcattgcagaagactggaagagtgaagcaacaactattttgaaag-- 13692436  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccact 174  Q
            ||||||||||||| |||||  |||| ||||||||||||||| |||||||| ||||||||||||    
T  13692435 -------acattggatgcttgatctttatagagtgttgacaaagtacaattgtacgaagtgtacaaccact 13692372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 14426739 - 14426542
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||| | | |||| |||||||| || ||| ||||   ||||| ||||||| ||| ||||||||||||| ||||||||||    
T  14426739 aggagatgcaa--cttaaagcttcagaagctgtttaatggattcaaactcatctaaagattgcagaagactggaaaagtgaagcaacgactattttgaaa 14426642  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  |||||||||||||||||||   ||||| || |||||||||||||| |||||||||| || | |||||||    
T  14426641 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctccactactctgtttttgtctct 14426542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 33605865 - 33605677
Alignment:
Q  16 taaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    |||||||||||| || | ||||| ||||||||||||||||| ||| ||| || |||| ||| | |||||||| || |||||||||||||||| || ||||    
T  33605865 taaagcttcaaaaggcttttcaacggatttaatctcgtctaagcaatgcagatgactggaaaattgaagcaatgactattttgaaaggatttgaaggcat 33605766  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||  ||||||||||||||||||| | |||||||| |||||||||||||| | |||||||  || | ||||||||||    
T  33605765 tggatgcttgttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactaccttcactactatgtttttgtctctgct 33605677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 66 - 201
Target Start/End: Complemental strand, 14193243 - 14193108
Alignment:
Q  66 aagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgt 165  Q
    |||||| ||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||  ||||||||| |||||||||||||||||||| |||    
T  14193243 aagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgaatgcttgttcttcaaagagcgttaacaaagtacaagtgtacgaagtgt 14193144  T
Q  166 acaaccactacatccactactcagtgtgtgtctctg 201  Q
    ||||||||||| || ||||||| || | ||||||||    
T  14193143 acaaccactacctctactactctgtttttgtctctg 14193108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 16309958 - 16310073
Alignment:
Q  88 gaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  | ||||||||    
T  16309958 gaatattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctacactactc 16310057  T
Q  188 agtgtgtgtctctgct 203  Q
    ||| ||||||||||||    
T  16310058 agtttgtgtctctgct 16310073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 13880768 - 13880607
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    ||||||||||||||| |||||||  ||||||||| || ||| ||||||| ||||||||||||||||||||||||| || ||  ||||||||| || |||     
T  13880768 ttaaagcttcaaaggctgttcaaaagatttaatcacgccta-gcattgcagaagactagaagagtgaagcaacgactaattcaaaaggatttgaaggcac 13880670  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaat-gtacaaccactac 176  Q
    |||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||    
T  13880669 tggatgcttgttctttgaagagcgttgaaaaaggacaattgtacgaagtggtacaaccactac 13880607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 331828 - 331637
Alignment:
Q  12 gacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatatttt-gaaaggatttcaaa 110  Q
    |||||||||||||||||||||||  ||||||| ||  ||||| | ||||||| ||||||| |||||||||||||||   |||||| |||||||| | ||     
T  331828 gacttaaagcttcaaaggttgttttatggattcaaggtcgtccaagcattgcagaagactggaagagtgaagcaacagctatttttgaaaggatctgaag 331729  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| ||  |  || |||||||||||||||||| |||||||| |||||||||||||| |||||||| |||| ||||||||||||    
T  331728 gcattggatgcttattgctcaaa-agcgttgacaaagtacaaatgtacgaagtgtacaaccactacctccactacacagtttgtgtctctgct 331637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 13260587 - 13260781
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||| |||||  |||| |||||||||||||||||| | ||||||| |||||| ||| |||| ||||||| | |||| | |      
T  13260587 aggagatgcaagacttaaagctccaaagactgtt-aatggatttaatctcgtccaagcattgcggaagaccagaggagtaaagcaacaactattctta-- 13260683  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
         | |||||||||||||||||||||| ||||||| |||| | ||||||| |||||||| |||||||||||||  |||||||| |||| |||||||||    
T  13260684 -----tgaaagcattggatgcttgttcttggaagagcattgagatagtacaattgtacgaagtgtacaaccactatctccactacccagtttgtgtctct 13260778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 13893966 - 13894148
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    ||||| || ||||||||||||||||||||||||| |||||||||| || ||| ||||||| |||||| |||||||||||||||||  || ||  ||||||    
T  13893966 agatgaaatacttaaagcttcaaaggttgttcaaaggatttaatcacgccta-gcattgcagaagaccagaagagtgaagcaacggctaattcaaaagga 13894064  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||| || |||||| ||| ||||||||| || ||| |||| |||| |||| ||||| |  |||||||||||||| ||||||||||    
T  13894065 tttgaaggcattgaatgtttgttctttaaaaagcattgaaaaaggacaattgtacaacgtgtacaaccactacctccactactc 13894148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 16111860 - 16112050
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| ||||||  ||||||| || ||||||||   | ||| ||||||   || ||||||||||||| | ||||| ||| | || || ||    
T  16111860 acttaaagcttcaaaagttgttttatggattcaacctcgtctaaagagtgcagaagacggaaaaagtgaagcaacgacttttttggaagaaattgaaggc 16111959  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| || | ||||||||||    
T  16111960 attggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 16112050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 35952663 - 35952851
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatgg-atttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaag 111  Q
    |||||| |||||||| | |||| ||||| ||| || |||||||| | ||||  ||||||| ||| ||||||||||||| |||||||||||||||| || |    
T  35952663 acttaaggcttcaaaagctgtttaatgggattcaacctcgtctaaggattgaagaagactggaaaagtgaagcaacgactattttgaaaggatttgaagg 35952762  T
Q  112 cattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||||||||| |||||| |  |||||||||||||||||||   |||||||| |||||||||||||| |||| ||||| || | |||||||    
T  35952763 cattggatgtttgttcatcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccattactctgtttttgtctct 35952851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 41842254 - 41842439
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||||||||||| | ||||| |||||||||| ||| |||  ||||  || ||||||||||||||| || ||  || | | || ||  ||||||    
T  41842254 aagcttcaaaggttgttcatttgatttgatctcgtctaagcactgcataagatcaggagagtgaagcaacgactaattcaaatgaagttgaagacattgg 41842353  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    || |||||| ||| ||| ||||||||| ||||||| |||||||| |||||||||||||| | ||||||||||| ||||||||||||    
T  41842354 atacttgttttttaaagtgcgttgacagagtacaattgtacgaagtgtacaaccactacctgcactactcagtttgtgtctctgct 41842439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 4821603 - 4821466
Alignment:
Q  65 gaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatg 164  Q
    ||||||||||| |||| |||||||  ||||||||||| |||| || |||||||||||||||||||  ||||||||||| |||||||   |||||||| ||    
T  4821603 gaagactagaaaagtggagcaacggctattttgaaag-atttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagtacgtttgtacgaagtg 4821505  T
Q  165 tacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||| |||||||||| || | ||||||||||    
T  4821504 tacaaccactacctccactactctgtttttgtctctgct 4821466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 176
Target Start/End: Original strand, 12174342 - 12174480
Alignment:
Q  39 ggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgtt-ctttgaagagc 137  Q
    ||||| || |||||||| | ||||| ||||||| ||| ||||||||||||| |||||||||||||||| || |||||||||||||||| ||   ||||||    
T  12174342 ggattcaacctcgtctaaggattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagc 12174441  T
Q  138 gttgacaaagtacaagtgtacgaaatgtacaaccactac 176  Q
    |||||||||||||   |||||||| ||||||||||||||    
T  12174442 gttgacaaagtacgtttgtacgaagtgtacaaccactac 12174480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4494700 - 4494638
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgc 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4494700 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 4494638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 13032046 - 13032210
Alignment:
Q  11 agacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaa 109  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||| | ||||| |||||| || ||||||||||||| | |||||  || | | || ||    
T  13032046 agacttaaagcttcaaatggttgttcaatggatttaatcacgccta-gtattgcagaagaccaggagagtgaagcaacaactatttcaaatgaagttgaa 13032144  T
Q  110 agcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccacta 175  Q
      |||| |||||| | | |||||||||||||||||||||| || |||||||| |||||||||||||    
T  13032145 gacattagatgctggctttttgaagagcgttgacaaagtataattgtacgaagtgtacaaccacta 13032210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 9098283 - 9098385
Alignment:
Q  74 aagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccac 173  Q
    |||||||||||||||  || ||  ||||||||| || ||||| |||| ||||||||||||||||||||| |||| |||| |||||||| |||||||||||    
T  9098283 aagagtgaagcaacggctaattcaaaaggatttgaatgcattagatgtttgttctttgaagagcgttgaaaaaggacaattgtacgaagtgtacaaccac 9098382  T
Q  174 tac 176  Q
    |||    
T  9098383 tac 9098385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 13472555 - 13472649
Alignment:
Q  13 acttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggattt 106  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||||||  |||||  | |||||||||||||| | ||||||||||||||||    
T  13472555 acttaaagctttaaaaggttgttcaatggatttaatctcgtctaagcattgtagaagatcataagagtgaagcaacaactattttgaaaggattt 13472649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 16543003 - 16543133
Alignment:
Q  20 gcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggat 119  Q
    |||||||| | |||| |||||||| || ||||| ||   ||||| ||||||| ||| ||||||||||||| |||||||||| ||||| || |||||||||    
T  16543003 gcttcaaaagctgtttaatggattcaaactcgtttaatgattgcagaagactggaaaagtgaagcaacgactattttgaaatgatttgaaggcattggat 16543102  T
Q  120 gcttgttctttgaagagcgttgacaaagtac 150  Q
    ||||||||||  ||||||  |||||||||||    
T  16543103 gcttgttcttcaaagagctctgacaaagtac 16543133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 16622659 - 16622529
Alignment:
Q  20 gcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggat 119  Q
    |||||||| | |||| |||||||| || ||||| ||   ||||| ||||||| ||| ||||||||||||| |||||||||| ||||| || |||||||||    
T  16622659 gcttcaaaagctgtttaatggattcaaactcgtttaatgattgcagaagactggaaaagtgaagcaacgactattttgaaatgatttgaaggcattggat 16622560  T
Q  120 gcttgttctttgaagagcgttgacaaagtac 150  Q
    ||||||||||  ||||||  |||||||||||    
T  16622559 gcttgttcttcaaagagctctgacaaagtac 16622529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 15704475 - 15704612
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| | |||| || ||||| || ||||||||   ||||| ||||||| ||| |||  |||||||| ||||||| |||||||| || ||    
T  15704475 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtatagcaacgactattttggaaggatttgaaggc 15704574  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtac 150  Q
    ||||||||||| |||||  ||||||||||||| |||||    
T  15704575 attggatgcttattcttcaaagagcgttgacatagtac 15704612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 19711059 - 19711176
Alignment:
Q  83 gcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccac 182  Q
    ||||||| || ||||||||||||| || ||||||||||||| | |||  |||||| ||||||||||||   |||||||| |||||||||||||  |||||    
T  19711059 gcaacgactaatttgaaaggatttgaaggcattggatgcttatccttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactatttccac 19711158  T
Q  183 tactcagtgtgtgtctct 200  Q
    ||||| || | |||||||    
T  19711159 tactctgtttttgtctct 19711176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 19339324 - 19339416
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||| |||||||||| | || ||||||||||    
T  19339324 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactctgagtttgtctctgct 19339416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 16556666 - 16556751
Alignment:
Q  65 gaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtac 150  Q
    ||||||| ||| ||||||||||||  |||||||||||||||| || ||||||  |||||||||||  ||||||||||| |||||||    
T  16556666 gaagactggaaaagtgaagcaacggctattttgaaaggattttaaggcattgattgcttgttcttcaaagagcgttgaaaaagtac 16556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 16608996 - 16608911
Alignment:
Q  65 gaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtac 150  Q
    ||||||| ||| ||||||||||||  |||||||||||||||| || ||||||  |||||||||||  ||||||||||| |||||||    
T  16608996 gaagactggaaaagtgaagcaacggctattttgaaaggattttaaggcattgattgcttgttcttcaaagagcgttgaaaaagtac 16608911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 1293114 - 1293025
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | |||||||    
T  1293114 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctct 1293025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 27871803 - 27871710
Alignment:
Q  111 gcattggatgcttgttctttgaaga-gcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  |||| ||||||||| |||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  27871803 gcattggatgcttattcttcaaagaagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 27871710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 203
Target Start/End: Complemental strand, 8183066 - 8182922
Alignment:
Q  59 attgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtac 158  Q
    ||||| ||||||| ||| |||  |||||| | |||||||||||||||  ||  || | ||||||| |||||  ||||||||||||| | |||   |||||    
T  8183066 attgcagaagactggaaaagtatagcaacaactattttgaaaggattgaaagacacttgatgcttattcttcaaagagcgttgacataatacgtctgtac 8182967  T
Q  159 gaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| |||||||||||||  |||||||||| || | ||||||||||    
T  8182966 gaagtgtacaaccactatctccactactctgtttttgtctctgct 8182922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 21381502 - 21381594
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaa-tgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    ||||||||||| | |||||  ||||||||||||| |||||   ||||||||| |||||||||||||| |||||||||| | || |||||||||    
T  21381502 gcattggatgcctattcttcaaagagcgttgacatagtacgtctgtacgaaaatgtacaaccactacttccactactctgagtttgtctctgc 21381594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 2265485 - 2265665
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||| ||| | |||| ||  |||| || ||||||||   ||||| |||||||  || |||  |||||||  ||||||| ||    
T  2265485 aggagatgcaa--cttaaagctttaaaagctgtttaacagattcaaactcgtctaaagattgcagaagactgaaaaagtatagcaacggctattttggaa 2265582  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccact 183  Q
    |||||| || | |||  |||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||| ||||||    
T  2265583 ggatttgaaggtatttaatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccact 2265665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 24794788 - 24794881
Alignment:
Q  111 gcattggatgcttgttctttgaaga-gcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| ||| |  |||| ||||||||| |||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  24794788 gcattggatgcttattcctcaaagaagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgct 24794881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 14425531 - 14425455
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| |||||  ||||||||||||| | |||   |||||||| |||||||||||||  ||||||||||    
T  14425531 gcattggatgcttattcttcaaagagcgttgacatattacgtttgtacgaagtgtacaaccactatctccactactc 14425455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 48062894 - 48062986
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   ||||||||  ||||||||||||  |||| ||||| || | ||||||||||    
T  48062894 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagcgtacaaccactatctccattactctgtttctgtctctgct 48062986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 48805953 - 48806029
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||  |||||  ||||||||||||| |||||    |||| || |||||||||||||| ||||||||||    
T  48805953 gcattggatgctatttcttcaaagagcgttgacatagtacgttcgtacaaagtgtacaaccactacttccactactc 48806029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 32683 - 32481
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||| ||||||||||    
T  32683 aggagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagtaacgactattttgaaa 32584  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||    
T  32583 ggatttgaatgcatttgatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 32484  T
Q  201 gct 203  Q
    |||    
T  32483 gct 32481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 49530 - 49328
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||| | ||||||||||    
T  49530 aggagatgcaagtcttaaagcttcaaagtttgttcaatggatttaatctcgtctaagcattgcagaagatttgaagagtgaagcaactactattttgaaa 49431  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||  ||||||||||||| |||||||||    
T  49430 ggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactcagtttgtgtctct 49331  T
Q  201 gct 203  Q
    |||    
T  49330 gct 49328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 351 - 444
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| || ||||||||||||| | |||  |||||||||||||||||||   |||||||| ||||| |||||||| ||||||||||    
T  351 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgtacgaccactacctccactactc 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 1888 - 1686
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||| | ||||||||||    
T  1888 aggaaatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaggagtgaagcaacaactattttgaaa 1789  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| ||| |||||||||    
T  1788 ggatttgaaggcattggatgcttgtactttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactacttagtttgtgtctct 1689  T
Q  201 gct 203  Q
    |||    
T  1688 gct 1686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 4e-74; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 20112652 - 20112852
Alignment:
Q  3 gagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaag 101  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||| ||||||| ||||||  ||||| ||||||||||| |||||||||||    
T  20112652 gagatgcaagacttaaagcttaaaaaggttgttcaatggatttaatctcttctaagcattgcagaagaccggaagaatgaagcaacgactattttgaaag 20112751  T
Q  102 gatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctg 201  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  20112752 gatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactatctccactactcagtttgtgtctctg 20112851  T
Q  202 c 202  Q
    |    
T  20112852 c 20112852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 32544463 - 32544261
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||  ||||||||||    
T  32544463 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgtctattttgaaa 32544364  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||| || |||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  32544363 ggatttaaaggcattggatgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttctgtctct 32544264  T
Q  201 gct 203  Q
    |||    
T  32544263 gct 32544261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 9718041 - 9717841
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||| ||||||||||||||| | ||||||||||    
T  9718041 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaaacattgtagaagactggaagagtgaagcaacaactattttgaaa 9717942  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||| |||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| || | |||||||    
T  9717941 ggatttaaaggcatttgatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 9717842  T
Q  201 g 201  Q
    |    
T  9717841 g 9717841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 26972179 - 26972379
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| | ||||||||||    
T  26972179 aggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagacttgaagagtgaagcaacaactattttgaaa 26972278  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||| ||||||||  ||||||||||||||||||||| ||  |||| |||||||||||||| ||||||||||||| | |||||||    
T  26972279 ggatttaaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattg--cgaagtgtacaaccactacctccactactcagtatttgtctct 26972376  T
Q  201 gct 203  Q
    |||    
T  26972377 gct 26972379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 13435730 - 13435544
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| || ||||||| ||||| | ||||||||||||||||| ||||||||||    
T  13435730 aggagatgcaagacttaaagcttcaaaggattttcaatggatttaatctcgtttaagcattgcagaagattggaagagtgaagcaacgactattttgaaa 13435631  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| ||||||||| ||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  13435630 ggatttgaaagcattgaatgattgttctttgaaaagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 13435544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15302398 - 15302196
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| ||||||| ||| ||||||||||||  ||||||||||    
T  15302398 aggagatgcaagacttaaagcgtcaaaggttgttcaatggatttaatctcgtctaaacattgcagaagactggaaaagtgaagcaacggctattttgaaa 15302299  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||||||||||||||||||||||||||||||  |||||| ||||| || |||||||||||||  |||||||||||||  ||||||||    
T  15302298 ggatttaaaggcattggatgcttgttctttgaagagcgttgacattgtacaattgtacaaagtgtacaaccactatctccactactcagttagtgtctct 15302199  T
Q  201 gct 203  Q
    |||    
T  15302198 gct 15302196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 23284762 - 23284564
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||  ||||||||||    
T  23284762 aggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagaccagaaaagtgaagcaacgcctattttgaaa 23284663  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    |||||| || |||||| |||||||||| |||||||||||||||||||||||| |||||||| |||| ||||| ||  ||||||||||||| ||||||||    
T  23284662 ggatttgaaggcattgaatgcttgttccttgaagagcgttgacaaagtacaattgtacgaagtgtataaccattatctccactactcagtttgtgtctc 23284564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12715370 - 12715573
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||| ||||| |  |||||||||||||||| |||||||||    
T  12715370 aggagatgcaagacttaaagcttcaaaaggctgttcaatggatttaatctcgtctaagcattgcagaagattgaaagagtgaagcaacgactattttgaa 12715469  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    | ||||| ||||||||| |||| | |||||||||||||||||||||||||||| |||||||| |||| ||||||||  ||||||||||||| ||||||||    
T  12715470 atgatttgaaagcattgtatgcctattctttgaagagcgttgacaaagtacaattgtacgaagtgtagaaccactatctccactactcagtttgtgtctc 12715569  T
Q  200 tgct 203  Q
    ||||    
T  12715570 tgct 12715573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 15531578 - 15531777
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| || |||||  |||||||||||||    
T  15531578 agatgcaagacttaaagcttgaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactagaagagtaaaacaacggttattttgaaagga 15531677  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| || |||||||||||||||||||  ||||||||||||||||||||| ||||||||  ||||||||||||| |||||||||| || | ||||||||||    
T  15531678 tttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagcgtacaaccactacctccactactctgtctttgtctctgct 15531777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 13602370 - 13602168
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||| | ||||||||||    
T  13602370 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatcttgtctaagcattgcagaagactggaagagtgaagcaaccactattttgaaa 13602271  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
     || || || ||||||||||||| ||||||||||| |||||||||| ||||| |||| ||| |||| ||||||||  ||||||||||||| |||||||||    
T  13602270 tgaattgaaggcattggatgcttattctttgaagaacgttgacaaaatacaattgtaagaagtgtataaccactatctccactactcagtttgtgtctct 13602171  T
Q  201 gct 203  Q
    |||    
T  13602170 gct 13602168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 15987422 - 15987232
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg-atttcaa 109  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||| || |||||| ||||| |||| ||    
T  15987422 agacttagagcttcaaaggatgttcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaagcaatgactattttaaaagggatttgaa 15987323  T
Q  110 agcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||| |||||||| |||||||||    
T  15987322 ggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccattactcagtttgtgtctct 15987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 24117024 - 24116824
Alignment:
Q  4 agatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||||| | |||||||  ||||| ||| |||||||| | ||  ||||||||||||    
T  24117024 agatgcaagacttaaagcttcaaaaggctgttcaatggattcaatctcgtccaagcattgcaaaagaccagaggagtgaagtagcggttattttgaaagg 24116925  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  24116924 atttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 24116825  T
Q  203 t 203  Q
    |    
T  24116824 t 24116824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 14100391 - 14100577
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| |||| ||||||  ||||||| ||||||||||| ||| | ||||||||||    
T  14100391 aggagatgcaagacttaaagtttcaaaggatgttcaatggatttaatctcatctaagcattgtagaagactggaagagtgaagaaacaactattttgaaa 14100490  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || ||||||||||||| |||||| ||||||||||||||||||||| | |||||| |||||||||||||| ||||||||||    
T  14100491 ggatttgaaggcattggatgcttcttctttaaagagcgttgacaaagtacaattatacgaagtgtacaaccactacctccactactc 14100577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18435754 - 18435552
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||||||| | ||| |  |||||||||| ||||||||||||| ||||||||||    
T  18435754 aggagatgcaagacttaaagctttgaaggttattcaatggatttaatctcgtctaagaatttcaaaagactagaaaagtgaagcaacgactattttgaaa 18435655  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||| |||| ||| | || | |||||||    
T  18435654 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacaaagtgtacaaccactacctccagtacactgtttttgtctct 18435555  T
Q  201 gct 203  Q
    |||    
T  18435554 gct 18435552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 18378496 - 18378310
Alignment:
Q  17 aaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattg 116  Q
    |||||||||| |||||||||||||||| ||||||||||| | |||||  |||||| ||||||| ||||||| | |||||||||||||||| || ||||||    
T  18378496 aaagcttcaacggttgttcaatggattaaatctcgtctaagtattgcaaaagactggaagagtcaagcaacaactattttgaaaggatttgaaggcattg 18378397  T
Q  117 gatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||||    
T  18378396 gatgcatgttctttgaagagcgttgataaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 18378310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 29918214 - 29918029
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||| | ||| ||||||||||||| || |||||||    
T  29918214 aggagatgcaagacttaaagcttcaaaggttgttca-tggatttaatctcgtctaagcattgcagaagattggaaaagtgaagcaacgactagtttgaaa 29918116  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     ||||| || ||||  |||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  29918115 agatttgaaggcatcagatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 29918029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19624177 - 19623975
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||| | |||||||  ||||| ||| |||||||||||||| |||| |||||    
T  19624177 aggagatgcaagtcttaaagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagaggagtgaagcaacgactattctgaaa 19624078  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgaca-aagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    |||||| ||||||||||||| |||||||||| |||||||| |||  ||||||| |||||||| |||||||||||||  ||||||||||||| |||||||     
T  19624077 ggatttgaaagcattggatgattgttctttggagagcgtt-acactagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctt 19623979  T
Q  200 tgct 203  Q
    ||||    
T  19623978 tgct 19623975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 21625298 - 21625114
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||| ||||||||  || |||||||    
T  21625298 aggagatgcaagacttacagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagattggaagagtaaagcaacggcta-tttgaaa 21625200  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    | |||| || |||||| ||||||||||||  ||||||||| ||||||||||| |||||||| |||||||||||||  |||||||||    
T  21625199 gcatttgaaggcattgcatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactatctccactact 21625114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19086346 - 19086154
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttg-ttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||||||||||||| ||| || || ||||||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| |||||||||    
T  19086346 aggagatgcaagacttaaagct-caagggctgattcaatggatttaatctcgtctaagtattgcagaagactgggagagtgaagcaacgactattttgaa 19086248  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||          ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||    
T  19086247 ag----------cattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctc 19086158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 19688953 - 19688789
Alignment:
Q  12 gacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaag 111  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||||||  ||| ||| |||||||||||||| || |||||||||||||||| || |    
T  19688953 gacttaaagcttcaaaggttgttcaatggatttattctcgtccaagcattgtagaaaactggaagagtgaagcaaggactattttgaaaggatttgaagg 19688854  T
Q  112 cattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactac 176  Q
    ||||||||| ||||||||  ||||||||||||||||||||| |||||||| |||| |||||||||    
T  19688853 cattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccactac 19688789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 16265116 - 16265303
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||||  | |||| ||| ||||||||||||| ||  |||||||| ||| || |||||    
T  16265116 taaagcttgaaaggttgttcaatggatttaatctcatctaagcattgcacaggactggaaaagtgaagcaacgagtagattgaaaggttttgaatgcatt 16265215  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||  ||||||||||| ||||||||| |||||||| ||| |||||||||| |||||||||| || ||||||||||||    
T  16265216 ggatgcttgttcttcaaagagcgttgagaaagtacaattgtacgaagtgtgcaaccactacctccactactctgtttgtgtctctgct 16265303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 22802324 - 22802153
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcatt 115  Q
    |||||||||||||||||||||||||||||||| | ||||| ||||||| || |||| ||| |||||| ||||||  | |||||||| |||| || |||||    
T  22802324 taaagcttcaaaggttgttcaatggatttaatattgtctaagcattgcagacgactggaaaagtgaaacaacgacaagtttgaaagaatttaaaggcatt 22802225  T
Q  116 ggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||||  ||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||||    
T  22802224 ggatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactacctccactactc 22802153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 20730671 - 20730837
Alignment:
Q  17 aaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattg 116  Q
    ||||||||||||| ||||||| |||||||||||| |||| | ||||| ||||||| ||| ||||||||||||| || ||||||||||||| || ||||||    
T  20730671 aaagcttcaaaggctgttcaagggatttaatctcatctaagtattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattg 20730770  T
Q  117 gatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccact 183  Q
    |||| ||||||||  ||||||||||||||||||||| ||||| || |||||||||||||| ||||||    
T  20730771 gatgtttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccact 20730837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 10640384 - 10640555
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    ||||||||||||||||||||||| |||||||||| || ||| ||||||| |||||| |||||||||||||||||| || ||  ||||||||| || ||||    
T  10640384 ttaaagcttcaaaggttgttcaaaggatttaatcacgccta-gcattgcagaagaccagaagagtgaagcaacgactaattcaaaaggatttgaaggcat 10640482  T
Q  115 tggatgcttgttctttgaagagcgttg-acaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    | ||||||||||||||||||||||||| | |||| |||| |||||||| |||||||||||||| |||||||||    
T  10640483 tagatgcttgttctttgaagagcgttgaaaaaaggacaattgtacgaagtgtacaaccactacctccactact 10640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34451619 - 34451787
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||||||||||| |||||||| ||||||||||||| | | ||||||| ||||||| |||||||  |||||||||||||||| || ||||| |    
T  34451619 aggagatgcaagacttaaagattcaaaggctgttcaatggattcagtatcgtctaagcattgcagaagactgaaagagtgaagcaacgactaatttgaga 34451718  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaa 169  Q
    |||||| ||||||||| |||| | ||||||||| |||||||||||||||||| ||||| || |||||||    
T  34451719 ggatttgaaagcattgtatgcctattctttgaaaagcgttgacaaagtacaattgtacaaagtgtacaa 34451787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 25594155 - 25594064
Alignment:
Q  112 cattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  25594155 cattggatgcttgttctttgaagcgcgttgacaaagtacaattgtacgaaatgtacaaccactacctccactactcagtttgtgtctctgct 25594064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 26943741 - 26943588
Alignment:
Q  33 ttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttga 132  Q
    ||||| ||||||||||  ||||| ||||||| |||||||||||||||||||||||   |||||  | ||||||  || ||||||||||||||||||||||    
T  26943741 ttcaaaggatttaatcatgtcta-gcattgcagaagactagaagagtgaagcaaccgctatttcaataggattagaaggcattggatgcttgttctttga 26943643  T
Q  133 agagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||| | |||||||| |||||||| |||||||||||||| ||||||||||    
T  26943642 agagcgttggcgaagtacaattgtacgaagtgtacaaccactacttccactactc 26943588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 19470850 - 19470683
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||||||||||||  ||||||||| || ||| |||||||  ||||| |||||| ||||||||||| || ||  ||||||||| || |||||||    
T  19470850 aagcttcaaaggttgttcaacagatttaatcacgccta-gcattgcacaagaccagaagaatgaagcaacgactaattcaaaaggatttgaaggcattgg 19470752  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    |||||||||||||| ||||||| || |||| |||| |||||||| | |||||||||||| |||||||||    
T  19470751 atgcttgttctttgcagagcgtggaaaaaggacaattgtacgaagtttacaaccactacctccactact 19470683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25597677 - 25597558
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||| |||||||||||| |||  ||||| ||||    
T  25597677 aggacatgcaagacttaaagcttcaaaggatgttcaatggatttaatctcgtctaagcattgtagaagactggaagagtgaagcgacggctatttcgaaa 25597578  T
Q  101 ggatttcaaagcattggatg 120  Q
    |||||| || ||||||||||    
T  25597577 ggatttgaaggcattggatg 25597558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 15954889 - 15954702
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| | |||| || ||||| || ||| ||||   ||||| ||||||| ||| | ||||||||||| || ||||||||||||| || ||    
T  15954889 acttaaagcttcaaaagctgtttaacggattcaaactcttctaaagattgcagaagactggaaaaatgaagcaacgactaatttgaaaggatttgaaggc 15954790  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||| ||||||||| ||  |||||||||||||||||||   |||||||| |||||||||||||| |||||||||| || | |||||||    
T  15954789 attgaatgcttgttattcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctct 15954702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 20487880 - 20488055
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggattt-aatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaag 111  Q
    |||||| |||||||| |||||| |||||  || || ||||||||   ||||| |||||||  || ||||||||||||  |||||||||||||||| || |    
T  20487880 acttaaggcttcaaaagttgtttaatggggttcaacctcgtctaaagattgcagaagactgtaaaagtgaagcaacggctattttgaaaggatttgaagg 20487979  T
Q  112 cattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||||||||  |||||||||||||||||||   |||||||| | |||||||||||| ||||||||||    
T  20487980 cattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtacgaagtttacaaccactacctccactactc 20488055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22076360 - 22076560
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||| ||| | |||| || |||||||| ||||||||   ||||| ||||||| ||| |||  |||||||| ||||||| ||    
T  22076360 aggagatgcaa--cttaaagctttaaaagctgtttaaaggatttaaactcgtctaaagattgcagaagactcgaaaagtatagcaacgactattttggaa 22076457  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||  |||||||| ||||||| |||||  ||||||||||||| ||||||  |||||||| |||||||||||||  |||||||||| || | |||||||    
T  22076458 ggattggaaagcatttgatgcttattcttcaaagagcgttgacatagtacatttgtacgaagtgtacaaccactatctccactactctgtttttgtctct 22076557  T
Q  201 gct 203  Q
    |||    
T  22076558 gct 22076560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 21618430 - 21618256
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| |||||| || ||||| || ||| ||||   ||||  ||||||| ||| ||| ||||||||| ||||||| |||||||| || ||    
T  21618430 acttaaagcttcaaaagttgtttaacggattcaaactcttctaaagattgtagaagactggaaaagtaaagcaacgactattttggaaggatttgaaggc 21618331  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||| ||||||||||    
T  21618330 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactc 21618256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 16877409 - 16877225
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagact-agaagagtgaagcaacgaatattttgaa 99  Q
    |||||||||||  |||||||||||||| |||||| |||||||| || ||||||||   ||||| ||||||| |||| ||||||||||||| ||| || ||    
T  16877409 aggagatgcaa--cttaaagcttcaaaagttgtttaatggattcaaactcgtctaaagattgcagaagactgagaa-agtgaagcaacgactatcttaaa 16877313  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||| || | ||||||||||  ||| |  |||||||||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  16877312 aggatttgaaggaattggatgctaattcctcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 16877225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16336323 - 16336123
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  ||| |||||||||| |||||| || ||||| || ||||||||  |||||| ||||||| ||| |||  |||||||| ||||||| ||    
T  16336323 aggagatgcaa--cttgaagcttcaaaagttgtttaaaggattcaaactcgtctaaacattgcagaagactggaaaagtatagcaacgactattttggaa 16336226  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||  || |||||| |||||| |||||  ||||||||||||| ||||| | |||||||| |||||||||||||  | |||||||| || | |||||||    
T  16336225 ggattagaaggcattgaatgcttattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctacactactctgtttttgtctct 16336126  T
Q  201 gct 203  Q
    |||    
T  16336125 gct 16336123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 19832985 - 19833170
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||| ||| | |||| || ||||| || ||| ||||   ||||| ||||||| ||| ||||||||||||| ||||||||||    
T  19832985 aggagatgcaa--cttaaagctttaaaagctgtttaacggattcaaactcatctaaagattgcagaagactggaaaagtgaagcaacgactattttgaaa 19833082  T
Q  101 ggatttcaaagcattggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||||||||| ||   ||||||||||||| |||||   |||||||| ||||||| |||||| ||||||||||    
T  19833083 ggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgtacgaagtgtacaagcactacctccactactc 19833170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 21235229 - 21235137
Alignment:
Q  95 ttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||| |||| || ||||| |||||||||||||  ||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||    
T  21235229 ttgaaagcatttgaaggcattcgatgcttgttcttcaaagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactc 21235137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 12349188 - 12349005
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||| ||||||||| | ||||  | ||||| || |||||||| | ||||| ||||||| ||| |||  |||||||| ||||||||||    
T  12349188 aggagatgcaa--cttagagcttcaaaagctgtttcaaggattcaaactcgtctaag-attgcagaagactggaaaagtatagcaacgactattttgaaa 12349092  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||  || ||||||||||||| |||||  ||||||||||||| |||||   ||||| || |||||||||||||  ||||||||||    
T  12349091 ggattgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacaaagtgtacaaccactatctccactactc 12349005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 12423428 - 12423273
Alignment:
Q  31 tgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttcttt 130  Q
    |||| |||||||| || |||||||| | || || ||||||| ||| |||  |||||||| |||||||||||||||  || |||||| |||||| |||||     
T  12423428 tgtttaatggattcaaactcgtctaagaat-gcagaagactggaaaagtatagcaacgactattttgaaaggattggaaggcattgtatgcttattcttc 12423330  T
Q  131 gaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     ||||||||||||| |||||   |||||||| |||||||||||||  ||||||||||    
T  12423329 aaagagcgttgacatagtacctttgtacgaagtgtacaaccactatctccactactc 12423273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 19066079 - 19066171
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| ||||    |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  19066079 gcattggatgcttattcttcaaagagcgttgacatagtatgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgct 19066171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 21235296 - 21235249
Alignment:
Q  16 taaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgc 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  21235296 taaagctttaaaggttgttcaatggatttaatctcgtctaagcattgc 21235249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 33351968 - 33352079
Alignment:
Q  91 tattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagt 190  Q
    |||||||||||||||  ||| ||||||||| || |||||  ||||||||||||| |||||   |||||||| ||||||| |||||  |||||||||| ||    
T  33351968 tattttgaaaggattgaaaaacattggatgtttattcttc-aagagcgttgacatagtacgtttgtacgaagtgtacaatcactatctccactactctgt 33352066  T
Q  191 gtgtgtctctgct 203  Q
     | ||||||||||    
T  33352067 ttttgtctctgct 33352079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 17381598 - 17381517
Alignment:
Q  122 ttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||  |||||||||||||||||||   |||||||| ||||||| |||||| ||||||| || || | ||||||||||    
T  17381598 ttgttcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaatcactacctccactattctgtttttgtctctgct 17381517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 26589667 - 26589595
Alignment:
Q  132 aagagcgttgacaaagtacaagtgtacgaaa-tgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||   ||||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  26589667 aagagcgttgacatagtacgtctgtacgaaagtgtacaaccactacttccactactctgtttctgtctctgct 26589595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 20635802 - 20635758
Alignment:
Q  108 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaa 152  Q
    |||||||||||||||||| |||  ||||| |||||||||||||||    
T  20635802 aaagcattggatgcttgtccttcaaagagagttgacaaagtacaa 20635758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 19385 - 19584
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| | ||||| ||||||||||||||||||||||| | ||||||||||    
T  19385 aggagatgcaagacttaaagcttcaaaagttgttcaatggatttaatttcgcctaagaattgcagaagactagaagagtgaagcaacaactattttgaaa 19484  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||||||||||| || ||||||||||| |||||||||    
T  19485 ggatttaaaagcattggatgcttgttctttgaagagcgttgacataatacaattgtacgaagtgtacaaccactatattcactactcagtttgtgtctct 19584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 203
Target Start/End: Original strand, 99201 - 99320
Alignment:
Q  82 agcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatcca 181  Q
    |||||||| ||||||| ||||||| ||| ||||||||||||| |||||   | |||| ||||| |||||   |||||||| |||||||||||||  ||||    
T  99201 agcaacgactattttggaaggattacaaggcattggatgcttattctt--caaagcgctgacatagtacgtttgtacgaagtgtacaaccactatctcca 99298  T
Q  182 ctactcagtgtgtgtctctgct 203  Q
    |||||| || | ||||||||||    
T  99299 ctactctgtttttgtctctgct 99320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 1858 - 1656
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||| |||||||||||||||||| |||||| ||||||||||    
T  1858 aggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatctcgtctaagctttgcagaagactagaagagtgaaacaacgactattttgaaa 1759  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||  || | |||||||    
T  1758 ggatttgaaagcattggatgcttactctttgaagagcgttgacaaagtacaattgtaggaagtgtacaaccactacctccactactttgtttttgtctct 1659  T
Q  201 gct 203  Q
    |||    
T  1658 gct 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 18542 - 18734
Alignment:
Q  9 caagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttca 108  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||| |    
T  18542 caagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttga 18641  T
Q  109 aagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctg 201  Q
    | ||||||||| |||||||||||||||||||||||||||||||| | |||||| |||||||||||||  ||||||||||||| ||||||||||    
T  18642 aggcattggatacttgttctttgaagagcgttgacaaagtacaattttacgaagtgtacaaccactatctccactactcagtttgtgtctctg 18734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 133; Significance: 2e-69; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 10020 - 10220
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || |||| ||||||||||||||||||||||||| |||||||||    
T  10020 aggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcatctaagctttgcagaagactagaagagtgaagcaacgactattttgaa 10119  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctc 199  Q
    ||||||| || |||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||| |||||||| |||||||||| || ||||||||    
T  10120 aggatttgaaggcattggatgcttgttttttaaagagcgttgacaaagtacaattgtacgaagtgtacgaccactacctccactactctgtttgtgtctc 10219  T
Q  200 t 200  Q
    |    
T  10220 t 10220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 14816 - 14884
Alignment:
Q  132 aagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||| |||||||||| || |||||||||    
T  14816 aagagcgttgacaaagtacaattgtacgaagtgtacgaccactacctccactactctgtttgtgtctct 14884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 15315 - 15116
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| |||||| |||||||||||||| ||| ||||||||||    
T  15315 aggagatgcaagacttaaagcttcaaaggctgatcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaagcatcgactattttgaaa 15216  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||  ||||||||| ||| ||| |||||    
T  15215 ggatttgaaagcattggatgattgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtatctct 15116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 12399 - 12205
Alignment:
Q  9 caagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttca 108  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| | ||||||||||| |||| |    
T  12399 caagacttaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaagaatttga 12300  T
Q  109 aagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||  ||||||||||||    
T  12299 aagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagattgtgtctctgct 12205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 131; Significance: 4e-68; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 377472 - 377674
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||| ||||||| ||||||  ||||||||||||||||| ||| ||||||    
T  377472 aggagatgcaagacttaaaacttcaaatgttgttgaatggatttaatctcgtctaagcattgcagaagaccggaagagtgaagcaacgactatattgaaa 377571  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||| || |||||||||||||  ||||||||||||| |||||||||    
T  377572 ggatttgaaggcattggatgcttgttctttgaagagcattgacaaagtacaattgtaccaagtgtacaaccactatctccactactcagtttgtgtctct 377671  T
Q  201 gct 203  Q
    |||    
T  377672 gct 377674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 220435 - 220234
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||  ||||||||||||||||||| |||||| ||| |||||||||||||| ||||||| |||||| || ||||||||||||||  || ||  ||     
T  220435 aggagatgagagacttaaagcttcaaaggctgttcattggttttaatctcgtctaagcattgcagaagaccaggagagtgaagcaacggctaattcaaat 220336  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    | |||| || |||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||| |||| ||||    
T  220335 gaatttgaa-gcattggatgcttgttatttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactacctccactactcagtttgtgcctct 220237  T
Q  201 gct 203  Q
    |||    
T  220236 gct 220234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 244219 - 244383
Alignment:
Q  22 ttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgc 121  Q
    |||||||| |||||||  ||||||||| || ||  || |||| |||||| |||||||||||||||| | || ||  ||||||||| ||  ||||||||||    
T  244219 ttcaaaggctgttcaaaagatttaatcacgcctg-gcgttgcagaagaccagaagagtgaagcaacaactaattcaaaaggatttgaagacattggatgc 244317  T
Q  122 ttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||||||||||| |||| |||| |||||||| |||||||||||||| ||||||||||    
T  244318 ttgttctttgaagagcgttgaaaaaggacaattgtacgaagtgtacaaccactacctccactactc 244383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 211583 - 211394
Alignment:
Q  14 cttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagca 113  Q
    |||||||||||||| |||||| || ||||| || ||||||||   ||||| ||||||| ||| |||  |||||||| ||||||| |||||||| || |||    
T  211583 cttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtatagcaacgactattttgtaaggattttaatgca 211484  T
Q  114 ttggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    || ||||||| |||||  ||||||||||||| |||||   |||||||| | |||||| ||||| |||||||||| || | ||||||||||    
T  211483 tttgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtatacaactactacctccactactctgtttttgtctctgct 211394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 128; Significance: 2e-66; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25888 - 26087
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||| ||| ||||||||||||| ||||||||||    
T  25888 aggagatgcaagacttaaagcgtcaaaggttgttcaatggatttaatctcgtctaagcattgcaaaagactggaaaagtgaagcaacgactattttgaaa 25987  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||| ||||||| ||||||| |||| ||| |||||||||||||  || |||||||||| |||||||||    
T  25988 ggatttgaaggcattggatgcttgttctttgaagagggttgacatagtacaattgtatgaagtgtacaaccactatctcgactactcagtttgtgtctct 26087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 44652 - 44782
Alignment:
Q  36 aatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaaga 135  Q
    |||||||||||||||||||| | ||||  ||||||| ||| ||||||||||||  |||||||||||||||| || ||||| |||||||||||||||||||    
T  44652 aatggatttaatctcgtctaagtattgtagaagactggaaaagtgaagcaacgtctattttgaaaggatttgaaggcattagatgcttgttctttgaaga 44751  T
Q  136 gcgttgacaaagtacaagtgtacgaaatgta 166  Q
    ||||||||| | ||||| |||||||| ||||    
T  44752 gcgttgacataatacaattgtacgaagtgta 44782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10167 - 9965
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| || |||| ||||||||||||||||||| ||||| ||||||||||    
T  10167 aggagatgcaagacttaaagcttcaaaggctattcaatggattcaatctcgtctaagctttgcagaagactagaagagtgaagtaacgactattttgaaa 10068  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||||||||||||||||  ||||||||||||||| ||||||||||| ||||| || |||||||||||||| |||||||||| || | |||||||    
T  10067 ggatttgaaagcattggatgcttactctttgaagagcgttcacaaagtacaattgtacaaagtgtacaaccactacctccactactctgtttttgtctct 9968  T
Q  201 gct 203  Q
    |||    
T  9967 gct 9965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22874 - 22672
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||| ||||||||||    
T  22874 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactattttgaaa 22775  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||||||||||||| |||||  ||||| ||||||||||||||| |||| |||  ||||||||||||| |||||||||| || | |||||||    
T  22774 ggatttgaaggcattggatgcttattcttcaaagagtgttgacaaagtacaattgtatgaagcgtacaaccactacctccactactctgtttttgtctct 22675  T
Q  201 gct 203  Q
    |||    
T  22674 gct 22672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 673 - 474
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| ||||||| ||||||| ||| ||||||||||||| ||||||||||    
T  673 aggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgcagaagactggaatagtgaagcaacgactattttgaaa 574  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||  |||| |||||||  |||||||||    
T  573 ggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccattatctccattactcaggttgtgtctct 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 124; Significance: 6e-64; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 60211 - 60012
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| | | ||||| ||||||| ||| ||||||||||||| |||||||||||||    
T  60211 agatgcaagacttaaagcttcaaaggatgttcaatggatttaatctcgtccaagaattgcagaagactggaaaagtgaagcaacgactattttgaaagga 60112  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| ||  ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||  ||||||||| ||||||||||||    
T  60111 tttgaagccattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctcttctactcagtttgtgtctctgct 60012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 8124 - 7922
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||  || ||||||||||||| ||||||||||    
T  8124 aggagatgcaaaacttaaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgtagaagactgtaaaagtgaagcaacgactattttgaaa 8025  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| ||  ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||  ||||||||  ||| |||||||||    
T  8024 ggatttgaattcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactacgaagtttgtgtctct 7925  T
Q  201 gct 203  Q
    |||    
T  7924 gct 7922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 151794 - 151831
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatc 48  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  151794 agacttaaagcttcaaaggttgttcaaaggatttaatc 151831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 212553 - 212366
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||| ||||||||||||||||||||| | ||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||| | |||||| |||    
T  212553 aggagatccaagacttaaagcttcaaaggctattctatggattcaatctcgtctaagcattgcagaagactagaagagtgaagcaacaactatttttaaa 212454  T
Q  101 -ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  212453 aggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 212366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 6111 - 6250
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  6111 aggagatgcaagacttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 6210  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgtt 140  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  6211 ggatttgaaagcattggatgcttgttctttgaagagcgtt 6250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 203
Target Start/End: Original strand, 20886 - 21086
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||   |||||||||||    
T  20886 gagatgcaagacttaaagcttcaaaggttgttcaattgatttaatctcgtctaagcattgcagaagactagaagagtgaagcaacggtcattttgaaagg 20985  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| || ||||||||||||| |||||  |||||||| ||| |||||||| |||||||| |||||||||||||  |||||||||| || | |||||||||    
T  20986 atttgaaggcattggatgcttattcttcaaagagcgtcgaccaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgc 21085  T
Q  203 t 203  Q
    |    
T  21086 t 21086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 7901 - 7712
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||| |||||||||||| |||| ||||||| ||    
T  7901 aggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcaaaagactggaagagtgaagccacgactattttggaa 7802  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagt 190  Q
    |||||| || |||||| ||| || |||||  ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  7801 ggatttaaaggcattgtatgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcagt 7712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 117; Significance: 9e-60; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 3 - 203
Target Start/End: Original strand, 36690 - 36890
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||| || |||||||| ||||||||||||| || |||||||||    
T  36690 gagatgcaagacttaaagcttcaaaggctgctcaatgaatttaatctcgtctaagcattgcagatgactagaaaagtgaagcaacgactaatttgaaagg 36789  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| || |||||||||||||||||||| ||||| |||||||||| |||| |||||||| |||||||||||||| || ||||||| || | |||||||||    
T  36790 atttgaaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgtacgaagtgtacaaccactacctctactactctgtttttgtctctgc 36889  T
Q  203 t 203  Q
    |    
T  36890 t 36890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 42315 - 42115
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||| || |||||||| ||||||||||||| || |||||||||    
T  42315 gagatgcaagacttaaagcttcaaaggctgctcaatgaatttaatctcgtctaagcattgcagatgactagaaaagtgaagcaacgactaatttgaaagg 42216  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgc 202  Q
    |||| || |||||||||||||||||||| ||||| |||||||||| |||| |||||||| |||||||||||||| || ||||||| || | |||||||||    
T  42215 atttgaaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgtacgaagtgtacaaccactacctctactactctgtttttgtctctgc 42116  T
Q  203 t 203  Q
    |    
T  42115 t 42115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 5603 - 5805
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||||  ||||| | |||||||| ||||||   ||||||||||    
T  5603 aggagatgcaagacttagagcttcaaaggttgttcaatggatttaatctcgtccaagtattgtagaagattggaagagtggagcaacatctattttgaaa 5702  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||| | || |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||  ||||||||||||| |||||||||    
T  5703 ggatatgaaggcattggatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaactactatctccactactcagtttgtgtctct 5802  T
Q  201 gct 203  Q
    |||    
T  5803 gct 5805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 115; Significance: 1e-58; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 19221 - 19027
Alignment:
Q  9 caagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttca 108  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||  ||||||| |||||||| |    
T  19221 caagacttaaagcttgaaaggctgttcaatggatttaatctcgtcaaagcattgcagaagactggaagagtgaagcaacggctattttggaaggatttaa 19122  T
Q  109 aagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    | ||||| |||||||||||||  ||||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||| | ||||||||||    
T  19121 aggcatttgatgcttgttcttcaaagagcgttggaaaagtacaagtgtacgaagtgtacaaccactacctccactactcagtttttgtctctgct 19027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 9755 - 9559
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| ||||||  | ||||| || || ||||| | ||||| ||||||| | | |||  |||||||| ||||||||||    
T  9755 aggagatgcaa--cttaaagcttcaaaagttgtttcaaggattcaaacttgtctaag-attgcagaagactgggaaagtatagcaacgactattttgaaa 9659  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||  |  ||||||||||||| ||||   || |||||||||| ||||| | |||||||| |||||||||||||  |||||||||| || | |||||||    
T  9658 ggattgaagggcattggatgcttattctacaaacagcgttgacatagtacgactgtacgaagtgtacaaccactatctccactactctgtttttgtctct 9559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 22056 - 22246
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    |||||||| |||||| |||||| || ||||| || ||||||||   ||||| ||||||| ||  |||  |||||||| ||| ||  |||||||  || ||    
T  22056 acttaaaggttcaaaagttgtttaaaggattaaaactcgtctaaagattgcagaagactggagaagtatagcaacgactatctttgaaggattggaaggc 22155  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||| |||||  | ||||||||||| | |||   |||||||| |||||||||||||  |||| ||||| || | ||||||||||    
T  22156 attggatgcttattcttcaatgagcgttgacataatacgtttgtacgaagtgtacaaccactatctccagtactctgtttttgtctctgct 22246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27342 - 27544
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||  ||||||||||||||   |||||||| |    
T  27342 aggagatgcaagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaacagctattttgata 27441  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||  || |||||||||||||| ||||  ||||||||||||||||||| | |||||||| |||||||||||||| |||||||||| || | |||||||    
T  27442 ggattcgaaggcattggatgcttgctcttcaaagagcgttgacaaagtaccattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 27541  T
Q  201 gct 203  Q
    |||    
T  27542 gct 27544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 181
Target Start/End: Original strand, 4863 - 5040
Alignment:
Q  4 agatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagga 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||  |||||||  ||||||||||| |||| |||||||||||||    
T  4863 agatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgtagaagactgaaagagtgaagcgacgactattttgaaagga 4962  T
Q  104 tttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatcca 181  Q
    ||| || |||||||||| |||||||||  |||||||||||||||||||| |||| ||| |||||||||||||| ||||    
T  4963 tttgaaggcattggatgtttgttctttatagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctcca 5040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 30422 - 30283
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  30422 aggagatgcaagacttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaa 30323  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgtt 140  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  30322 ggatttgaaagcattggatgcttgttctttgaagagcgtt 30283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 10088 - 9899
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||||| ||||| | |||||||||| |||||| ||||||| |||||  ||||||||| | |||||| || ||  || | |||| || ||    
T  10088 acttaaagcttcaaaggctgttctaaggatttaatcacgtcta-gcattgcagaagatcagaagagtgcaacaacgactaattcaaatgaatttgaaggc 9990  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||| |||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |||||||||  || ||||||||||||    
T  9989 attagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactacctccactactatgtttgtgtctctgct 9899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 89970 - 90170
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  ||||||||||||||||||| |||||| ||||||||||||||| | ||| | ||||||| |||||||||| |||||  ||||||||||    
T  89970 aggagatgcaa--cttaaagcttcaaaggttgatcaatgtatttaatctcgtctaagtattacagaagactggaagagtgaaccaacggctattttgaaa 90067  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||| || | |||||||    
T  90068 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaaatacaagtgtacgaagtgtacaacccctacctccactactctgtttttgtctct 90167  T
Q  201 gct 203  Q
    |||    
T  90168 gct 90170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 13739 - 13567
Alignment:
Q  31 tgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttcttt 130  Q
    ||||||||||||||||||||||||| ||||||| ||||| | ||| ||||||||||| | |||||||||||||||| || |||||||||| |||||||||    
T  13739 tgttcaatggatttaatctcgtctaagcattgcagaagattggaatagtgaagcaacaactattttgaaaggatttgaaggcattggatgtttgttcttt 13640  T
Q  131 gaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||| ||||||| ||||| || |||||||||||||  ||||||||||||| ||||||||||||    
T  13639 gaagagcgttgacatagtacaattgtacaaagtgtacaaccactatctccactactcagtttgtgtctctgct 13567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 103770 - 103585
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||| | |||||  |||||| ||||||| ||||||||||||||||  ||||||||||    
T  103770 aggagatgcaagacttaaagcttgaaaggttgttaaatgaatttaattttgtctaaacattgcagaagactggaagagtgaagcaacggctattttgaaa 103671  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
     ||| | || |||||||||||||||||||  ||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||    
T  103670 tgatattaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtgcaaccactacctccactact 103585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15993 - 15789
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaagg-ttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaa 99  Q
    ||||||||||||||||||||||||||| | |||||||||||||| ||||||||| | | |||||  ||||| ||| |||||||||| | | |||||||||    
T  15993 aggagatgcaagacttaaagcttcaaaagattgttcaatggattcaatctcgtccaagaattgcaaaagaccagaggagtgaagcaccaattattttgaa 15894  T
Q  100 aggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtac-aagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtct 198  Q
    |||| || || |||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| |  || |||||||||| |||||||    
T  15893 aggacttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaaattgtacgaagtgtacaaccaccatctctactactcagtttgtgtct 15794  T
Q  199 ctgct 203  Q
    |||||    
T  15793 ctgct 15789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 9992 - 9825
Alignment:
Q  2 ggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaag 101  Q
    |||||||||||| |||||||||||| | ||||| |||||||||||||||||||| |||||   |||||| | |||||||||| ||||| |||||||||||    
T  9992 ggagatgcaagatttaaagcttcaaggtttgtttaatggatttaatctcgtctaagcattatagaagaccaaaagagtgaagtaacgactattttgaaag 9893  T
Q  102 gatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaa 169  Q
    || || |||||||||||||||||| |||||||||||||||||| ||||||| ||||| || |||||||    
T  9892 gacttgaaagcattggatgcttgtgctttgaagagcgttgacatagtacaattgtacaaagtgtacaa 9825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 143284 - 143129
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaagg 102  Q
    ||||||||||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||| ||||||| ||||    
T  143284 gagatgcaagactcaaagcttgaaaggctattcaatggatttaatctcgtcaaagcattgcagaagactggaagagtgaagcaacgactattttggaagg 143185  T
Q  103 atttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtac 158  Q
    |||| || |||||||||||||||||||  ||||||||||  |||||||||||||||    
T  143184 atttaaaggcattggatgcttgttcttcaaagagcgttggaaaagtacaagtgtac 143129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 10144 - 9952
Alignment:
Q  11 agacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaa 109  Q
    ||||||||||||||||| || |||||||||||||||||| || ||| ||||||| |||||| | |||||||||||||||  || ||  || | |||| ||    
T  10144 agacttaaagcttcaaatggctgttcaatggatttaatcacgccta-gcattgcagaagaccataagagtgaagcaacggctaattcaaatgaatttgaa 10046  T
Q  110 agcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
     ||||| |||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||||| |||||| |||||    
T  10045 ggcattcgatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactactcagtttgtgtcgctgct 9952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 215412 - 215596
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||| ||||||| | |||| |||||||| || ||||||||   ||||| ||||||||||| ||||||||||||  ||||||||||    
T  215412 aggagatgcaa--cttaaaacttcaaaagctgtttaatggattcaaactcgtctaaagattgcagaagactagaaaagtgaagcaacggctattttgaaa 215509  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||| || |||||||||||||||||||  |||||||||||||||||||   |||||||| |||||||||||||| ||||||||||    
T  215510 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 215596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 6190 - 6003
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    ||||||||||||||  ||||||| |||||||||| || ||| ||||||| |||||| ||||||  |||||||| | || ||  ||||||||| || ||||    
T  6190 ttaaagcttcaaagactgttcaaaggatttaatcacgccta-gcattgcagaagaccagaagaccgaagcaacaactaattcaaaaggatttgaaggcat 6092  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || |||||||  | ||||||||||||    
T  6091 tggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctctactactctatttgtgtctctgct 6003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 699 - 832
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||||||||| ||||||||  ||||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||  || ||||||||||    
T  699 aggagatgcaagacttaaaacttcaaagactgttcaatgaatttaatctcgtctaagcattgcagaagactggaatagtgaagcactgactattttgaaa 798  T
Q  101 ggatttcaaagcattggatgcttgttctttgaag 134  Q
    |||||| || ||||||||||||||||||||||||    
T  799 ggatttgaaggcattggatgcttgttctttgaag 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 570 - 767
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||| | | ||||  ||||||| || ||||||||   ||||| ||||||| ||| ||||||||||||| ||||||||||    
T  570 aggagatgcaa--cttaaagcttcagaagctgtttgatggattcaaactcgtctaaagattgcagaagactggaaaagtgaagcaacgactattttgaaa 667  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||||||||||||  |||||||||||||||||||   ||||| || |||||||||||||| |||||||||| || | |||||||    
T  668 ggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctccactactctgtttttgtctct 767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 1778 - 1854
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| |||||  ||||||||||||| | |||   |||||||| |||||||||||||  ||||||||||    
T  1778 gcattggatgcttattcttcaaagagcgttgacatattacgtttgtacgaagtgtacaaccactatctccactactc 1854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 80; Significance: 1e-37; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 39623 - 39488
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |  |||||||||||||||||||||| | || |||||||    
T  39623 aggagatgcaagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaggcattacaaaagactagaagagtgaagcaacaactaatttgaaa 39524  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagag 136  Q
    |||||| || ||||| ||||| |||||||| |||||    
T  39523 ggatttgaaggcattagatgcatgttctttaaagag 39488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 137683 - 137548
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |  |||||||||||||||||||||| | || |||||||    
T  137683 aggagatgcaagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaggcattacaaaagactagaagagtgaagcaacaactaatttgaaa 137584  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagag 136  Q
    |||||| || ||||| ||||| |||||||| |||||    
T  137583 ggatttgaaggcattagatgcatgttctttaaagag 137548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 159242 - 159051
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||  ||||||  ||||  |||||||||||||||||  || ||  || | |||| ||     
T  159242 agacttagagcttcaaaggatgttcaaaggatttaatcacgtctaa-cattgcaaaagatcagaagagtgaagcaacggctaattcaaatgaatttgaag 159144  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||  |||||||||||||||||||||||||||||| |||| |||| ||| |||| ||||||||| || ||||||  || ||||||||||||    
T  159143 gcattatatgcttgttctttgaagagcgttgacaaaggacaattgtatgaagtgtaaaaccactacctctactactttgtttgtgtctctgct 159051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 37463 - 37414
Alignment:
Q  138 gttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||| |||||||||| |||||||| |||||||||||||| ||||||||||    
T  37463 gttggcaaagtacaattgtacgaagtgtacaaccactacctccactactc 37414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 135523 - 135474
Alignment:
Q  138 gttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||| |||||||||| |||||||| |||||||||||||| ||||||||||    
T  135523 gttggcaaagtacaattgtacgaagtgtacaaccactacctccactactc 135474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 78292 - 78481
Alignment:
Q  14 cttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagca 113  Q
    |||||||||||||| | | || |  ||||| || ||||||||   ||||| ||||||| ||| ||||||||||||| |||||||||||||||| || |||    
T  78292 cttaaagcttcaaaagctatttatcggattcaaactcgtctaaagattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggca 78391  T
Q  114 ttggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||| |||||| |||||||||||||||||||   |||||||| |||||||||||||| | |||||||  || | ||||||||||    
T  78392 ttggatgcttattctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctacactactatgtttttgtctctgct 78481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 6655 - 6839
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| || ||||| || || ||||| | ||||| ||||||| ||| ||||||||| ||| ||||||||||    
T  6655 aggagatgcaa--cttaaagcttcaaaagctgtttaacggattcaaacttgtctaaggattgcagaagactggaaaagtgaagcaccgactattttgaaa 6752  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
     ||||| || |||||||||||||||||||  |||||| ||||||||||||   |||||||| |||||||||||||| |||| |||||    
T  6753 agatttgaaggcattggatgcttgttcttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacctccagtactc 6839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 5529 - 5717
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcat 114  Q
    |||||| |||||| |||||| |||||||| || ||||||||   ||||| ||||||| ||| ||| ||||||| | |||||||||||||||| || ||||    
T  5529 ttaaagattcaaaagttgtttaatggattcaaactcgtctaaagattgcagaagactggaaaagtaaagcaacaactattttgaaaggatttgaaggcat 5628  T
Q  115 tggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    | ||||||| |||||  ||||||||||||||||||||  | || ||| |||||||||||||| |||||||||  || | ||||||||||    
T  5629 ttgatgcttattcttcaaagagcgttgacaaagtacatttatatgaagtgtacaaccactacctccactactatgtttttgtctctgct 5717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 1614 - 1814
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  || ||||||||||| | |||| |||||||| || ||||| ||   ||||| ||||||| ||| ||||||||||||| ||||||||||    
T  1614 aggagatgcaa--ctcaaagcttcaaaagctgtttaatggattcaaactcgtttaaatattgcagaagacttgaaaagtgaagcaacgactattttgaaa 1711  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || ||| |||||| ||||||||  |||||||||||||||||||   | |||||| |||||||||||||| | |||| ||| || | |||||||    
T  1712 ggatttgaaggcactggatgattgttcttcaaagagcgttgacaaagtacgtttttacgaagtgtacaaccactaccttcactgctctgtttttgtctct 1811  T
Q  201 gct 203  Q
    |||    
T  1812 gct 1814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 4908 - 4988
Alignment:
Q  3 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaag 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||  ||||||||||    
T  4908 gagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactgaaagagtgaag 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 1452 - 1619
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||||||||||||  ||||||||| || | |  |||||| |||||||| | |||||||||||||| |||||  ||||||||| || |||||||    
T  1452 aagcttcaaaggttgttcaaatgatttaatcacgcccat-cattgcagaagactataggagtgaagcaacgactatttcaaaaggatttgaaggcattgg 1550  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    | | || ||||||||||| |||||  |||| |||| |||||||| |||||||||||||  |||||||||    
T  1551 acgtttattctttgaagaacgttggaaaaggacaattgtacgaagtgtacaaccactatctccactact 1619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 60999 - 60802
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||| ||||||| |||||| || |||||||| ||||||||   ||||| ||||||| ||| |||  |||||||  ||||||| ||    
T  60999 aggagatgcaa--cttaaaacttcaaaagttgtttaaaggatttaaactcgtctaaaaattgcagaagactggaaaagtatagcaacggctattttggaa 60902  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||  || |||||| ||||||||||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||| || | |||||||    
T  60901 ggattggaaggcattgaatgcttgttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctct 60802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 36115 - 36281
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    ||||||||||||||||||||| ||||||||| ||||||  |||||| ||||||| ||||| ||||||||| | |||||  || || ||| || |||||||    
T  36115 aagcttcaaaggttgttcaattgatttaatcacgtctat-cattgcagaagactggaagaatgaagcaacaactatttcaaatggttttaaaggcattgg 36213  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactac 185  Q
    |||||| ||| ||| |||| ||||| || | |||| |||||||| |||||||||||||  ||||||||    
T  36214 atgctttttcgttggagagagttgaaaatggacaattgtacgaagtgtacaaccactatctccactac 36281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 34827 - 34919
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| |||||  ||||||||||||| |||||   |||| ||| |||||||||||||| |||||||||| || | ||||||||||    
T  34827 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtatgaagtgtacaaccactacctccactactctgtttttgtctctgct 34919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 25688 - 25777
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    ||||||||||||| |||||  || |||||||||| |||||   |||||||| |||||||||||||| |||||||||| || | |||||||    
T  25688 gcattggatgcttattcttcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctct 25777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 43843 - 44018
Alignment:
Q  11 agacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaa 110  Q
    ||||||||| ||||||||| |||||||  ||||||||| || |||  |||||| |||||  ||||||||||||||| |  || ||  ||| ||||| ||     
T  43843 agacttaaaacttcaaaggctgttcaaaagatttaatcacgcctaa-cattgcagaagatcagaagagtgaagcaaaggctaattcaaaaagatttgaag 43941  T
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||| ||||| |||||||||||||| |||| |||  |||||||| |||||||||||||  ||||||||||    
T  43942 gcattggatgcctgttccttgaagagcgttgaaaaaggacatttgtacgaattgtacaaccactatctccactactc 44018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 65 - 190
Target Start/End: Complemental strand, 5760 - 5636
Alignment:
Q  65 gaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatg 164  Q
    ||||||||||||| ||||||||||| |||||  || | |||| || ||||||||||||| ||||||| ||| |||||  ||| ||||| |||||||| ||    
T  5760 gaagactagaagaatgaagcaacgactatttcaaatgaatttgaaggcattggatgcttattctttggagaacgttg-gaaaatacaattgtacgaagtg 5662  T
Q  165 tacaaccactacatccactactcagt 190  Q
    |||||||||||| |||||||||||||    
T  5661 tacaaccactacctccactactcagt 5636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 40817 - 40649
Alignment:
Q  18 aagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattgg 117  Q
    |||||||||||| |||||||  ||||||||| |  ||| ||||||| |||||| |||||||||||||||||  || ||  |||| |||| || ||||  |    
T  40817 aagcttcaaaggctgttcaaaagatttaatcacaccta-gcattgcagaagaccagaagagtgaagcaacggctaattcaaaagaatttgaaggcatatg 40719  T
Q  118 atgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||| | ||||||||||||||||||| |||| |||| |||| ||| |||||||||||||| | ||||||||    
T  40718 atggtggttctttgaagagcgttgaaaaagaacaattgtaagaagtgtacaaccactaccttcactactc 40649  T

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Target: scaffold0530 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 2027 - 2082
Alignment:
Q  120 gcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccacta 175  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  2027 gcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 2082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5852 - 5935
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaa-ggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaag 83  Q
    ||||||||||||||||||||||||||| || |||||||||||||| ||||||| || ||||||| |||||| | ||||||||||    
T  5852 aggagatgcaagacttaaagcttcaaaaggatgttcaatggatttcatctcgtttaagcattgcagaagaccataagagtgaag 5935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 9350 - 9168
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| || ||||| || ||| || | | ||||| ||||| | ||| |||  |||||||| ||||||| ||    
T  9350 aggagatgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcatcaaag-attgcagaagattggaaaagtatagcaacgactattttggaa 9254  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    |||||  || ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||  |||||||||    
T  9253 ggattagaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 9168  T

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Target: scaffold0011 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 164952 - 165045
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| || ||||||||||||| | |||  |||||||||||||||||||   |||||||| ||||| |||||||| ||||||||||    
T  164952 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgtacgaccactacctccactactc 165045  T

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Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 65344 - 65485
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | | ||  | ||||| || |||||||| | ||||| ||||||| ||| |||  || ||||| ||||||||||    
T  65344 aggagatgcaa--cttaaagcttcaaaagctatttcaaggattcaaactcgtctaag-attgcagaagactggaaaagtatagaaacgactattttgaaa 65440  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaa 145  Q
    |||||  |  ||||||||||||| |||||  ||||||||||||||    
T  65441 ggattaaagggcattggatgcttattcttcaaagagcgttgacaa 65485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 144389 - 144530
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | | ||  | ||||| || |||||||| | ||||| ||||||| ||| |||  |||||||| | ||||||||    
T  144389 aggagatgcaa--cttaaagcttcaaaagctatttcaaggattcaaactcgtctaag-attgcagaagactggaaaagtatagcaacgactgttttgaaa 144485  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaa 145  Q
    |||||  |  ||||||||||||| |||||  ||||||||||||||    
T  144486 ggattaaagggcattggatgcttattcttcaaagagcgttgacaa 144530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 3500 - 3300
Alignment:
Q  1 aggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaa 100  Q
    |||||||||||  |||||||||||||| | |||| || ||||| || ||||||||   ||||| ||||| | ||| |||  | |||||  ||||||| ||    
T  3500 aggagatgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagattgcagaagattggaaaagtataacaacggctattttggaa 3403  T
Q  101 ggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctct 200  Q
    |||||| || |||||||||| || |||||  ||||||||||| | |||||   ||||| || |||||||||||||| |||||| ||| || | |||||||    
T  3402 ggatttgaaggcattggatgtttattcttcaaagagcgttgatatagtacgtttgtacaaagtgtacaaccactacctccactgctctgtttttgtctct 3303  T
Q  201 gct 203  Q
    |||    
T  3302 gct 3300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 38091 - 38184
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| || ||||||||||||| | |||  |||||||||||||||||||    ||||||| ||||| |||||||| ||||||||||    
T  38091 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtccgtacgaagtgtacgaccactacctccactactc 38184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 74682 - 74577
Alignment:
Q  98 aaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtc 197  Q
    ||||||||| || | ||| |||||||| |||||||| ||| |||||||||||||| |||| ||| |||||||||||||| || ||||||  || ||| ||    
T  74682 aaaggatttgaaggaattagatgcttgctctttgaaaagcattgacaaagtacaattgtatgaagtgtacaaccactacctctactactttgtttgtatc 74583  T
Q  198 tctgct 203  Q
    ||||||    
T  74582 tctgct 74577  T

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Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 74751 - 74718
Alignment:
Q  15 ttaaagcttcaaaggttgttcaatggatttaatc 48  Q
    ||||||||||||||||||||||| ||||||||||    
T  74751 ttaaagcttcaaaggttgttcaaaggatttaatc 74718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 1405 - 1329
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||| ||||||| || ||||||||||||||| ||| ||||| |||||||| |||||||||||||  ||||||||||    
T  1405 gcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactc 1329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 6 - 82
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||| ||||||| || ||||||||||||||| ||| ||||| |||||||| |||||||||||||  ||||||||||    
T  6 gcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactc 82  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 7127 - 7255
Alignment:
Q  59 attgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtac 158  Q
    ||||| ||||||| ||| |||  |||||||| ||||||| |||||||  |||||||||||||||| |||||  || | ||||||||  ||||   |||||    
T  7127 attgcagaagactggaaaagtatagcaacgactattttggaaggattggaaagcattggatgcttattcttcaaacaacgttgacatggtacgtttgtac 7226  T
Q  159 gaaatgtacaaccactacatccactactc 187  Q
    ||| |||||||||||||  ||||||||||    
T  7227 gaagtgtacaaccactatctccactactc 7255  T

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Target: scaffold0220 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 1803 - 1895
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactact 186  Q
    ||||||||||||| || ||||||||||||| | |||  |||||||||||||||||||   | |||||| ||||| |||||||| |||||||||    
T  1803 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctatacgaagtgtacgaccactacctccactact 1895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 8117 - 7963
Alignment:
Q  13 acttaaagcttcaaaggttgttcaatggatttaatctcgtctacgcattgctgaagactagaagagtgaagcaacgaatattttgaaaggatttcaaagc 112  Q
    ||||||||||||||| | ||||  | ||||| || |||||||| | ||||| ||||||| ||| |||  |||||||| |||||||||||||||  |  ||    
T  8117 acttaaagcttcaaaagctgtttcaaggattcaaactcgtctaag-attgcagaagactggaaaagtatagcaacgactattttgaaaggattgaattgc 8019  T
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtaca 168  Q
    ||| ||||||| |||||  ||||||||||||| |||||   |||||||| ||||||    
T  8018 attcgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtaca 7963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 203
Target Start/End: Original strand, 25393 - 25514
Alignment:
Q  82 agcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatcca 181  Q
    |||||||| |||||||||||||||  |  |||||||||  || |||||  ||||| ||||||| |||||   |||||||| |||||||||||||  ||||    
T  25393 agcaacgactattttgaaaggattgaagggcattggatagttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactatctcca 25492  T
Q  182 ctactcagtgtgtgtctctgct 203  Q
    |||||| || | ||||||||||    
T  25493 ctactctgtttttgtctctgct 25514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 7469 - 7393
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||  ||| |  ||||||||||||| ||||||  |||||||| |||||||||||||| ||||||||||    
T  7469 gcattggatgctaattcatcaaagagcgttgacatagtacatttgtacgaagtgtacaaccactacttccactactc 7393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 2726 - 2845
Alignment:
Q  83 gcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccac 182  Q
    ||||||| ||||||| |||| ||  |||||||||||||| | |||||  ||||| ||||||| |||||   |||||||| |||||||||||||  |||||    
T  2726 gcaacgactattttggaagg-ttggaaagcattggatgcgtattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactatctccac 2824  T
Q  183 tactcagtgtgtgtctctgct 203  Q
    ||||| || | ||||||||||    
T  2825 tactctgtttttgtctctgct 2845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 87623 - 87715
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    |||||||||||   |||||  ||||||||||||| |||||   |||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  87623 gcattggatgcaaattcttcaaagagcgttgacatagtacgtctgtacgaagtgtacaaccactacttccactactctgtttctgtctctgct 87715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 846 - 920
Alignment:
Q  113 attggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||| |||||  ||||||||||||| | |||   |||||||| |||||||||||||| ||||||||||    
T  846 attggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactacttccactactc 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 15628 - 15721
Alignment:
Q  94 tttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    ||||||||||||| || ||||||||||||| |  ||  |||||| ||||||||||||   |||||||| ||||| |||||||  ||||||||||    
T  15628 tttgaaaggatttgaaggcattggatgcttatctttcaaagagcattgacaaagtacgtctgtacgaagtgtacgaccactatctccactactc 15721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 17788 - 17880
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||||| | |||  ||||||||||||| |||||   |||| ||| |||||||||||||  |||||||||| || | ||||||||||    
T  17788 gcattggatgcttatccttcaaagagcgttgacatagtacgtttgtatgaagtgtacaaccactatctccactactctgtttttgtctctgct 17880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 3939 - 3990
Alignment:
Q  132 aagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccact 183  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||| ||||||    
T  3939 aagagcgttgacaaagtacatctgtacgaagtgtacgaccactacctccact 3990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 31805 - 31883
Alignment:
Q  108 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactc 187  Q
    |||||||||||||||| ||||||| ||| |||||  |||| ||||  |||| || |||||||||||||| ||||||||||    
T  31805 aaagcattggatgcttattctttggagaacgttggaaaaggacaatagtac-aagtgtacaaccactacctccactactc 31883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 5347 - 5440
Alignment:
Q  111 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaa-tgtacaaccactacatccactactcagtgtgtgtctctgct 203  Q
    ||||||||||| | |||||  ||||||||||||| |||||   ||||  ||| |||||||||||||| |||||||||| | || ||||||||||    
T  5347 gcattggatgcctattcttcaaagagcgttgacatagtacgtatgtagaaaagtgtacaaccactacttccactactctgagtttgtctctgct 5440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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