View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0657_low_3 (Length: 357)
Name: NF0657_low_3
Description: NF0657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0657_low_3 |
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[»] chr3 (9 HSPs) |
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[»] chr7 (14 HSPs) |
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[»] chr5 (17 HSPs) |
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[»] chr8 (10 HSPs) |
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[»] scaffold1351 (2 HSPs) |
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[»] scaffold0395 (2 HSPs) |
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[»] scaffold0071 (2 HSPs) |
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[»] chr4 (6 HSPs) |
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[»] chr2 (9 HSPs) |
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[»] chr6 (8 HSPs) |
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[»] scaffold0737 (2 HSPs) |
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[»] chr1 (8 HSPs) |
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[»] scaffold0815 (1 HSPs) |
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[»] scaffold0599 (2 HSPs) |
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[»] scaffold0810 (1 HSPs) |
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[»] scaffold0116 (3 HSPs) |
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[»] scaffold0632 (1 HSPs) |
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[»] scaffold0371 (1 HSPs) |
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[»] scaffold0004 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 31224758 - 31224862
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
31224758 |
gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtttaagttgttaagttgtaagatgttgatc |
31224857 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
31224858 |
caaat |
31224862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 31415452 - 31415348
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
31415452 |
gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc |
31415353 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
31415352 |
caaat |
31415348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 15447801 - 15447905
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||| |
|
|
T |
15447801 |
gatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatattgatc |
15447900 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
15447901 |
caaat |
15447905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 31224635 - 31224693
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
31224635 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
31224693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 15447681 - 15447739
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
15447681 |
cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
15447739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 11913092 - 11913034
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
T |
11913092 |
cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaa |
11913034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 6808291 - 6808250
Alignment:
Q |
147 |
atgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
6808291 |
atgattaatattgatgatttactttgatgattaaatgtgaaa |
6808250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 1988912 - 1988971
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| |||||||||| ||||||| || || || ||||||||||||||||||| |
|
|
T |
1988912 |
cagagaggatgattaagatgatttaatattgttgattcacgttgatgattaaatgtgaaa |
1988971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 20630361 - 20630398
Alignment:
Q |
321 |
tgtttaagttgtt-aagttgtaagatgttgatccaaat |
357 |
Q |
|
|
||||||||||||| |||||||||||||||||||||||| |
|
|
T |
20630361 |
tgtttaagttgtttaagttgtaagatgttgatccaaat |
20630398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 81; Significance: 5e-38; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 36686054 - 36686158
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
36686054 |
gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc |
36686153 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
36686154 |
caaat |
36686158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 30821060 - 30821164
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
30821060 |
gatggtaacttgctgcatatgtttaaatgatgttgtcttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc |
30821159 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
30821160 |
caaat |
30821164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 38480285 - 38480181
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| |
|
|
T |
38480285 |
gatggtgacttgctgcatatatttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatatctaagttgttaagttgtaagatgttgatc |
38480186 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
38480185 |
caaat |
38480181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 30820937 - 30820995
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
30820937 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
30820995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 36685934 - 36685989
Alignment:
Q |
133 |
agaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
36685934 |
agaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
36685989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 11085170 - 11085112
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
11085170 |
cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
11085112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 15213869 - 15213812
Alignment:
Q |
131 |
agagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
T |
15213869 |
agagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaa |
15213812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 11092908 - 11092850
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
11092908 |
cagagagtgtgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
11092850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 9320423 - 9320468
Alignment:
Q |
143 |
taagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
T |
9320423 |
taagatgattaatattgatgatttattttgatgattaaatgtgaaa |
9320468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 15439457 - 15439398
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| |||||||||| ||||||| || ||||| ||||||||||||||||||| |
|
|
T |
15439457 |
cagagaggatgactaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa |
15439398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 37727607 - 37727666
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| |||||||||| ||||||| || ||||| ||||||||||||||||||| |
|
|
T |
37727607 |
cagagaggatgattaagatgatttaatattgttgctttacgttgatgattaaatgtgaaa |
37727666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 8468326 - 8468256
Alignment:
Q |
289 |
cttgctgttgtgatgaattaataccattaaaatgtttaagttg--ttaagttgtaagatgttgatccaaat |
357 |
Q |
|
|
||||||| ||||||| ||||||| |||||| ||| | | |||| |||||||||||||||||||||||||| |
|
|
T |
8468326 |
cttgctgatgtgatgtattaatatcattaagatgctaatgttggtttaagttgtaagatgttgatccaaat |
8468256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 14270266 - 14270336
Alignment:
Q |
289 |
cttgctgttgtgatgaattaataccattaaaatgtttaagttg--ttaagttgtaagatgttgatccaaat |
357 |
Q |
|
|
||||||| ||||||| ||||||| |||||| ||| | | |||| |||||||||||||||||||||||||| |
|
|
T |
14270266 |
cttgctgatgtgatgtattaatatcattaagatgctaatgttggtttaagttgtaagatgttgatccaaat |
14270336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 45847862 - 45847932
Alignment:
Q |
289 |
cttgctgttgtgatgaattaataccattaaaatgtttaagttg--ttaagttgtaagatgttgatccaaat |
357 |
Q |
|
|
||||||| ||||||| ||||||| |||||| ||| | | |||| |||||||||||||||||||||||||| |
|
|
T |
45847862 |
cttgctgatgtgatgtattaatatcattaagatgctaatgttggtttaagttgtaagatgttgatccaaat |
45847932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 12122325 - 12122429
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
T |
12122325 |
gatggtgacttgcggcatatgtttaaatgatgatgtcttgctgttgtgatgaattaataccattgagatgtttaagttgttaagttgtaagatgttgatc |
12122424 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
12122425 |
caaat |
12122429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 17875262 - 17875158
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||||||||||||||||||||| | | |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||| |||||| |
|
|
T |
17875262 |
gatggtgacttgctgcatatgtttaaatgatattatcttgctgttgtgaagaattaataccattaagatgtctaagttgttaagttgtaagatattgatc |
17875163 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
17875162 |
caaat |
17875158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 21555183 - 21555288
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaatacca-ttaaaatgtttaagttgttaagttgtaagatgttgat |
351 |
Q |
|
|
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| |
|
|
T |
21555183 |
gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccatttaagatgtctaagttgttaagttgtaagatgttgat |
21555282 |
T |
 |
Q |
352 |
ccaaat |
357 |
Q |
|
|
|||||| |
|
|
T |
21555283 |
ccaaat |
21555288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 257 - 357
Target Start/End: Original strand, 21557853 - 21557953
Alignment:
Q |
257 |
gtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatccaaa |
356 |
Q |
|
|
|||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
T |
21557853 |
gtgacttgctgcatatgtttaaatgatgttgtcttgctgttatgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaa |
21557952 |
T |
 |
Q |
357 |
t |
357 |
Q |
|
|
| |
|
|
T |
21557953 |
t |
21557953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 30615804 - 30615700
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
||||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
30615804 |
gatggtgacttgctgcatatgtttaaacgatgatgtcttgctgttgcgatgaattaataccattaagatgtataagttgttaagttgtaagatgttgatc |
30615705 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
30615704 |
caaat |
30615700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 31455125 - 31455021
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
31455125 |
gatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaagtaataccattaagatgtctaagttgttaagttgtaagatgttgatc |
31455026 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
31455025 |
caaat |
31455021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 31455738 - 31455634
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
T |
31455738 |
gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaagtaataccattaagatgtctaagttgttaagttgtaagatgttgata |
31455639 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
31455638 |
caaat |
31455634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 31455249 - 31455193
Alignment:
Q |
132 |
gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
31455249 |
gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
31455193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 31455862 - 31455806
Alignment:
Q |
132 |
gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
31455862 |
gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
31455806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 21555060 - 21555118
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
21555060 |
cagagaggatgaataagatgattaatattgatgttttagtttgatgattaaatgtgaaa |
21555118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 21557726 - 21557784
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
21557726 |
cagagaggatgaataagatgattaatattgatgttttagtttgatgattaaatgtgaaa |
21557784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 12122202 - 12122260
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
T |
12122202 |
cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa |
12122260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 30615926 - 30615868
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
T |
30615926 |
cagagaggatgaataagatgattaatattgataatttacttttatgattaaatgtgaaa |
30615868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 36460341 - 36460283
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
T |
36460341 |
cagagaggatgaacaagatgattaataatgatgatttactttgatgattaaatgtgaaa |
36460283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 24212526 - 24212481
Alignment:
Q |
143 |
taagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
24212526 |
taagatgattaatattgatgatttactttgatgattaaatgtgaaa |
24212481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 35852781 - 35852736
Alignment:
Q |
143 |
taagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
35852781 |
taagatgattaatattgatgatttactttgatgattaaatgtgaaa |
35852736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 5889092 - 5889151
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| || ||||||| ||||||| || ||||| ||||||||||||||||||| |
|
|
T |
5889092 |
cagagaggatgattatgatgatttaatattgttgatttacgttgatgattaaatgtgaaa |
5889151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 21580010 - 21580115
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaatacca-ttaaaatgtttaagttgttaagttgtaagatgttgat |
351 |
Q |
|
|
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| |
|
|
T |
21580010 |
gatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccatttaagatgtctaagttgttaagttgtaagatgttgat |
21580109 |
T |
 |
Q |
352 |
ccaaat |
357 |
Q |
|
|
|||||| |
|
|
T |
21580110 |
ccaaat |
21580115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 29763672 - 29763775
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
29763672 |
gatggtga-ttgctgcatatgtttaaatgatgatgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc |
29763770 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
29763771 |
caaat |
29763775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 41680926 - 41681029
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
T |
41680926 |
gatggtgacttgctgcatatgtttaaatggtgatgtcttgttgttgtgatgaattaataccattaagatgtc-aagttgttaagttgtaagatgttgatc |
41681024 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
41681025 |
caaat |
41681029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 21579887 - 21579945
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
T |
21579887 |
cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa |
21579945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 29763549 - 29763607
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
T |
29763549 |
cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa |
29763607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 42560208 - 42560266
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
T |
42560208 |
cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaa |
42560266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 22965797 - 22965704
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatg |
346 |
Q |
|
|
|||||||| ||| |||||||||||||||| | |||||||||| |||||||| ||||| ||||| |||| |||||||||||||| ||||||| |
|
|
T |
22965797 |
gatggtgatttgatgcatatgtttaaatggtgttgtcttgctgttatgatgaatcaatactattaagatgtctaagttgttaagttttaagatg |
22965704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 18760706 - 18760648
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||| |||||||||||||||||||||| | |||| | ||||||||||||||||| |
|
|
T |
18760706 |
cagagagtatgaataagatgattaatattgtgggtttaagtagatgattaaatgtgaaa |
18760648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 357
Target Start/End: Original strand, 27472561 - 27472597
Alignment:
Q |
322 |
gtttaagttgtt-aagttgtaagatgttgatccaaat |
357 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||| |
|
|
T |
27472561 |
gtttaagttgtttaagttgtaagatgttgatccaaat |
27472597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 357
Target Start/End: Original strand, 38550256 - 38550292
Alignment:
Q |
322 |
gtttaagttgtt-aagttgtaagatgttgatccaaat |
357 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||| |
|
|
T |
38550256 |
gtttaagttgtttaagttgtaagatgttgatccaaat |
38550292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1351 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold1351
Description:
Target: scaffold1351; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 1614 - 1510
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
1614 |
gatggtgacttgatgcatatgtttaaatgatgttgtcttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc |
1515 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
1514 |
caaat |
1510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1351; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 1736 - 1679
Alignment:
Q |
131 |
agagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
1736 |
agagaggattaataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
1679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0395 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0395
Description:
Target: scaffold0395; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 257 - 357
Target Start/End: Complemental strand, 10939 - 10839
Alignment:
Q |
257 |
gtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatccaaa |
356 |
Q |
|
|
|||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
T |
10939 |
gtgacttgctgcatatgtttaaatgatgttgtcttgctgttttgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatccaaa |
10840 |
T |
 |
Q |
357 |
t |
357 |
Q |
|
|
| |
|
|
T |
10839 |
t |
10839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0395; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 11053 - 11008
Alignment:
Q |
143 |
taagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||| |||||| |||||| |||||||||||||||||| |
|
|
T |
11053 |
taagatgattaatgttgatgatttactatgatgattaaatgtgaaa |
11008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0071 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0071
Description:
Target: scaffold0071; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 14388 - 14284
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||| |
|
|
T |
14388 |
gatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagattttgatc |
14289 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
14288 |
caaat |
14284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0071; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 14511 - 14453
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
14511 |
cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
14453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 33186150 - 33186046
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
33186150 |
gatggtgacttgctgcatttgtttaaatgatgatgtcttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc |
33186051 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
33186050 |
caaat |
33186046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 33186273 - 33186215
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
T |
33186273 |
cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaa |
33186215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 15880855 - 15880810
Alignment:
Q |
143 |
taagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||| |||||||||| ||||||||||| ||||||||||||| |
|
|
T |
15880855 |
taagatgatcaatattgatgatttactttgattattaaatgtgaaa |
15880810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 362145 - 362075
Alignment:
Q |
289 |
cttgctgttgtgatgaattaataccattaaaatgtttaagttg--ttaagttgtaagatgttgatccaaat |
357 |
Q |
|
|
||||||| ||||||| ||||||| |||||| ||| | | |||| |||||||||||||||||||||||||| |
|
|
T |
362145 |
cttgctgatgtgatgtattaatatcattaagatgctaatgttggtttaagttgtaagatgttgatccaaat |
362075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 13844744 - 13844685
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| |||||||||| |||||| || ||||| ||||||||||||||||||| |
|
|
T |
13844744 |
cagagaggatgattaagatgatttaatattattgatttacgttgatgattaaatgtgaaa |
13844685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 14185331 - 14185273
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||| ||||||||||||||||| ||| ||||||| |||||| |||||||||||| |
|
|
T |
14185331 |
cagagagtatgaataagatgattaacgttgttgttttaagttgatggttaaatgtgaaa |
14185273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 22501037 - 22500933
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||| ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||| |
|
|
T |
22501037 |
gatggtaacttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatattgatc |
22500938 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
22500937 |
caaat |
22500933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 22508971 - 22508867
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||| ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||| |
|
|
T |
22508971 |
gatggtaacttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatattgatc |
22508872 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
22508871 |
caaat |
22508867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 24865574 - 24865678
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
24865574 |
gatggtgacttgatgcatatgtttaaatgatgttgtcttgctattgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc |
24865673 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
24865674 |
caaat |
24865678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 253 - 347
Target Start/End: Original strand, 7672356 - 7672450
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgt |
347 |
Q |
|
|
|||||||||||| |||||| |||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| |
|
|
T |
7672356 |
gatggtgacttgatgcatacgtttaaatgatgctgtcttgctgttgtgatgaattaataccattaagatgtctaagttgttaagtcgtaagatgt |
7672450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 7672240 - 7672297
Alignment:
Q |
131 |
agagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
7672240 |
agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
7672297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 24865452 - 24865509
Alignment:
Q |
131 |
agagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
24865452 |
agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
24865509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 2524410 - 2524468
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
2524410 |
cagagagtatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
2524468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 22501148 - 22501102
Alignment:
Q |
142 |
ataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
22501148 |
ataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
22501102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 22509082 - 22509036
Alignment:
Q |
142 |
ataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
22509082 |
ataagatgattaatattgatgatttactttgatgattaaatgtgaaa |
22509036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 69; Significance: 7e-31; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 20734251 - 20734354
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||| |
|
|
T |
20734251 |
gatggtgacttgctgcatatgtttaaatggtgttgtcttgctgttgtgatgaattaataccattaagatg-tcaagttgttaagttgtaagatgttgatc |
20734349 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
20734350 |
caaat |
20734354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 20734128 - 20734186
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |
|
|
T |
20734128 |
cagagaggatgaataaaatgatttatattgatgatttactttgatgattaaatgtgaaa |
20734186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 27851373 - 27851315
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||| |
|
|
T |
27851373 |
cagagaggatgaataagatgatttatattgatgatttaccttgatgattaaatgtgaaa |
27851315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 34296953 - 34297008
Alignment:
Q |
133 |
agaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| |
|
|
T |
34296953 |
agaggatgaataagatgattaataatgatgatttactttgatgattagatgtgaaa |
34297008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 22421123 - 22421080
Alignment:
Q |
145 |
agatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
22421123 |
agatgattaatattgatgatttactttgatgattaaatgtgaaa |
22421080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 2201277 - 2201232
Alignment:
Q |
143 |
taagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
T |
2201277 |
taagatgattaatattgatgatttactttgatgattaaatatgaaa |
2201232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 25956537 - 25956596
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| |||||||||| ||||||| || ||||| ||||||||||||||||||| |
|
|
T |
25956537 |
cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa |
25956596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 25956661 - 25956714
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat |
306 |
Q |
|
|
|||||| |||||||| |||||||||||||| | ||||||||||||||||||| |
|
|
T |
25956661 |
gatggttacttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaat |
25956714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0737 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0737
Description:
Target: scaffold0737; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 6482 - 6585
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
T |
6482 |
gatggtgacttgctgcatatgtttaaatggtgttgtcttgctattgtgatgaattaataccattaagatgtc-aagttgttaagttgtaagatgttgatc |
6580 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
6581 |
caaat |
6585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0737; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 6359 - 6417
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| |
|
|
T |
6359 |
cagagaggatgaataagatgattaataataatgatttactttgatgattaaatgtgaaa |
6417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 51274392 - 51274496
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaagttgtaagatgttgatc |
352 |
Q |
|
|
|||||||||||| |||||||||||||||| | | ||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
T |
51274392 |
gatggtgacttgatgcatatgtttaaatgtttttgttttgttgttgtgatgaattaataccattaagatgtctaagttgttaagttgtaagatgttgatc |
51274491 |
T |
 |
Q |
353 |
caaat |
357 |
Q |
|
|
||||| |
|
|
T |
51274492 |
caaat |
51274496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 12328538 - 12328594
Alignment:
Q |
132 |
gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
T |
12328538 |
gagaggatgaataagatgattaatattgatgatttactttgatgattaaatttgaaa |
12328594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 8885555 - 8885510
Alignment:
Q |
143 |
taagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
T |
8885555 |
taagatgattaatattgatgatttactttgatgattaaatgtgaaa |
8885510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 51274290 - 51274327
Alignment:
Q |
151 |
ttaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||| |
|
|
T |
51274290 |
ttaatattgatgatttactttgatgattaaatgtgaaa |
51274327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 41305818 - 41305888
Alignment:
Q |
289 |
cttgctgttgtgatgaattaataccattaaaatgtttaagttg--ttaagttgtaagatgttgatccaaat |
357 |
Q |
|
|
||||||| ||||||| ||||||| |||||| ||| | | |||| |||||||||||||||||||||||||| |
|
|
T |
41305818 |
cttgctgatgtgatgtattaatatcattaagatgctaatgttggtttaagttgtaagatgttgatccaaat |
41305888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 43697578 - 43697519
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| |||||||||| ||||||| || |||| ||||||||||||||||||| |
|
|
T |
43697578 |
cagagaggatgattaagatgatttaatattgttgatttaagttgatgattaaatgtgaaa |
43697519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 28194489 - 28194542
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat |
306 |
Q |
|
|
|||||| |||||||| |||||||||||||| | ||||||||||||||||||| |
|
|
T |
28194489 |
gatggttacttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaat |
28194542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 51326998 - 51326969
Alignment:
Q |
133 |
agaggatgaataagatgattaatattgatg |
162 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
51326998 |
agaggatgaataagatgattaatattgatg |
51326969 |
T |
 |
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Target: scaffold0815 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0815
Description:
Target: scaffold0815; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 532 - 450
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaattaataccattaaaatgtttaagttgttaa |
335 |
Q |
|
|
||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||| |||| ||||||||||| |
|
|
T |
532 |
gatggtgacttgctgcatatgttaaaatgatgttgtcttgctgttgtgatgaattaatatcattaagatgtctaagttgttaa |
450 |
T |
 |
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Target: scaffold0599 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0599
Description:
Target: scaffold0599; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 4786 - 4728
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
T |
4786 |
cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaa |
4728 |
T |
 |
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Target: scaffold0599; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 368 - 310
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| |
|
|
T |
368 |
cagagaggatgaataagatgattaataatgatgatttactttgatgattatatgtgaaa |
310 |
T |
 |
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Target: scaffold0810 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0810
Description:
Target: scaffold0810; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 3136 - 3077
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| |||||||||| ||||||| || ||||| ||||||||||||||||||| |
|
|
T |
3136 |
cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa |
3077 |
T |
 |
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Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0116
Description:
Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 43700 - 43759
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| |||||||||| ||||||| || ||||| ||||||||||||||||||| |
|
|
T |
43700 |
cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa |
43759 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0116; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 47620 - 47679
Alignment:
Q |
130 |
cagagaggatgaataagatgatt-aatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
|||||||||||| |||||||||| ||||||| || ||||| ||||||||||||||||||| |
|
|
T |
47620 |
cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaa |
47679 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0116; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 43824 - 43877
Alignment:
Q |
253 |
gatggtgacttgctgcatatgtttaaatgacactctcttgctgttgtgatgaat |
306 |
Q |
|
|
|||||| |||||||| |||||||||||||| | ||||||||||||||||||| |
|
|
T |
43824 |
gatggttacttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaat |
43877 |
T |
 |
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Target: scaffold0632 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0632
Description:
Target: scaffold0632; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 344 - 313
Alignment:
Q |
326 |
aagttgttaagttgtaagatgttgatccaaat |
357 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
344 |
aagttgttaagttgtaagatgttgatccaaat |
313 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0371 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0371
Description:
Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 3234 - 3176
Alignment:
Q |
130 |
cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaa |
188 |
Q |
|
|
||||||| |||||||||||||||||| ||| | |||| ||||||||||||||||||| |
|
|
T |
3234 |
cagagagtatgaataagatgattaatgttgtggatttaagttgatgattaaatgtgaaa |
3176 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 362861 - 362825
Alignment:
Q |
322 |
gtttaagttgtt-aagttgtaagatgttgatccaaat |
357 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||| |
|
|
T |
362861 |
gtttaagttgtttaagttgtaagatgttgatccaaat |
362825 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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