View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0658-Insertion-4 (Length: 146)
Name: NF0658-Insertion-4
Description: NF0658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0658-Insertion-4 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 110; Significance: 9e-56; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 110; E-Value: 9e-56
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 3168175 - 3168037
Alignment:
| Q |
8 |
atgtccagattatagccagcctaagcataannnnnnngtcaaagacaactcagaaatataaaatcttggccaaacaacttttacactttcttatatgatt |
107 |
Q |
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| T |
3168175 |
atgtccagattatagccagcctaagcataaattttttgtcaaagacaactcagaaatataaaatcttggccaaacaacttttacactttcttatatgatt |
3168076 |
T |
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| Q |
108 |
tagtttgtgtggggttgatgacgagtttaataaaatcag |
146 |
Q |
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| T |
3168075 |
tagtttgtgtggggctgacgacgagtttaataaaatcag |
3168037 |
T |
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