View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0660_low_6 (Length: 289)

Name: NF0660_low_6
Description: NF0660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0660_low_6
NF0660_low_6
[»] chr1 (45 HSPs)
chr1 (72-257)||(21662395-21662581)
chr1 (1-69)||(21654447-21654515)
chr1 (1-72)||(9175344-9175414)
chr1 (1-71)||(17149382-17149453)
chr1 (11-74)||(41212895-41212958)
chr1 (1-71)||(2117046-2117116)
chr1 (1-71)||(18059127-18059197)
chr1 (7-73)||(18595213-18595279)
chr1 (1-71)||(20114717-20114787)
chr1 (1-71)||(22036252-22036322)
chr1 (1-71)||(24568114-24568184)
chr1 (1-71)||(29139729-29139799)
chr1 (1-71)||(45052213-45052283)
chr1 (7-73)||(5071764-5071830)
chr1 (1-71)||(20255139-20255209)
chr1 (2-71)||(19961909-19961977)
chr1 (7-72)||(22228622-22228687)
chr1 (7-71)||(20346856-20346920)
chr1 (21-71)||(13104008-13104058)
chr1 (21-71)||(20887158-20887208)
chr1 (21-71)||(27329099-27329149)
chr1 (21-71)||(35521656-35521706)
chr1 (18-71)||(41395048-41395101)
chr1 (7-71)||(13583199-13583262)
chr1 (7-58)||(44034330-44034381)
chr1 (21-72)||(46524203-46524254)
chr1 (1-71)||(7640305-7640375)
chr1 (21-71)||(15860807-15860857)
chr1 (1-71)||(17005459-17005528)
chr1 (21-71)||(20913881-20913931)
chr1 (21-71)||(20932194-20932244)
chr1 (21-71)||(21719119-21719169)
chr1 (11-69)||(21860877-21860935)
chr1 (1-59)||(22238180-22238238)
chr1 (1-71)||(24521840-24521909)
chr1 (1-71)||(38054480-38054549)
chr1 (1-71)||(42442962-42443031)
chr1 (2-71)||(51453275-51453344)
chr1 (7-71)||(20348395-20348458)
chr1 (2-58)||(22030866-22030921)
chr1 (11-71)||(49968518-49968578)
chr1 (21-71)||(20446535-20446585)
chr1 (21-71)||(20532299-20532349)
chr1 (21-59)||(41219279-41219317)
chr1 (26-58)||(37843825-37843857)
[»] chr4 (49 HSPs)
chr4 (1-71)||(10645028-10645098)
chr4 (1-71)||(18249015-18249085)
chr4 (7-76)||(9296347-9296416)
chr4 (1-71)||(18169786-18169856)
chr4 (7-71)||(45631558-45631622)
chr4 (7-74)||(37477980-37478047)
chr4 (5-71)||(8056693-8056759)
chr4 (1-71)||(15271673-15271743)
chr4 (1-71)||(22351434-22351504)
chr4 (1-77)||(8378982-8379058)
chr4 (1-72)||(41063359-41063429)
chr4 (1-71)||(6400969-6401039)
chr4 (1-71)||(10489368-10489438)
chr4 (1-71)||(15293724-15293794)
chr4 (18-71)||(26681021-26681074)
chr4 (7-71)||(14996957-14997021)
chr4 (11-71)||(21958781-21958841)
chr4 (11-71)||(53704063-53704123)
chr4 (7-71)||(53907057-53907121)
chr4 (21-71)||(122748-122798)
chr4 (1-71)||(9796042-9796112)
chr4 (1-72)||(14952593-14952666)
chr4 (1-71)||(15286615-15286685)
chr4 (21-71)||(16523664-16523714)
chr4 (21-71)||(18286508-18286558)
chr4 (1-71)||(26339835-26339904)
chr4 (21-71)||(39120928-39120978)
chr4 (21-71)||(44056802-44056852)
chr4 (1-71)||(47358459-47358529)
chr4 (7-68)||(9290476-9290537)
chr4 (11-71)||(13247291-13247351)
chr4 (7-71)||(15000984-15001048)
chr4 (21-73)||(25118512-25118564)
chr4 (21-72)||(7131434-7131485)
chr4 (28-71)||(54047229-54047272)
chr4 (21-71)||(8871783-8871833)
chr4 (21-71)||(13047619-13047669)
chr4 (1-71)||(16327315-16327385)
chr4 (1-71)||(27954856-27954925)
chr4 (21-71)||(39467805-39467855)
chr4 (21-71)||(44347709-44347759)
chr4 (26-71)||(34396150-34396195)
chr4 (26-71)||(54117598-54117643)
chr4 (21-77)||(16733059-16733114)
chr4 (11-71)||(45458174-45458234)
chr4 (21-71)||(12836534-12836584)
chr4 (18-71)||(14499574-14499625)
chr4 (21-57)||(5681859-5681895)
chr4 (11-71)||(23269244-23269303)
[»] chr2 (49 HSPs)
chr2 (1-73)||(33128887-33128959)
chr2 (1-71)||(5888010-5888079)
chr2 (1-71)||(19886035-19886104)
chr2 (1-71)||(34825280-34825350)
chr2 (1-74)||(38703801-38703874)
chr2 (7-72)||(42535470-42535535)
chr2 (4-71)||(23777414-23777481)
chr2 (1-71)||(20015831-20015901)
chr2 (1-71)||(23820875-23820945)
chr2 (1-71)||(23829954-23830024)
chr2 (1-71)||(42177337-42177407)
chr2 (7-71)||(14905829-14905893)
chr2 (1-73)||(21273409-21273481)
chr2 (1-71)||(17396031-17396101)
chr2 (1-71)||(19688780-19688850)
chr2 (1-71)||(21142691-21142761)
chr2 (1-71)||(21918853-21918923)
chr2 (1-71)||(23774952-23775022)
chr2 (21-74)||(463576-463629)
chr2 (1-58)||(25419869-25419926)
chr2 (7-71)||(17367679-17367743)
chr2 (11-71)||(22863773-22863833)
chr2 (21-71)||(9652232-9652282)
chr2 (1-71)||(22512551-22512620)
chr2 (1-71)||(24685148-24685217)
chr2 (21-71)||(25213890-25213940)
chr2 (21-71)||(43642310-43642360)
chr2 (7-72)||(12729203-12729267)
chr2 (7-71)||(3797985-3798048)
chr2 (7-71)||(8944657-8944720)
chr2 (11-71)||(23836019-23836079)
chr2 (26-73)||(25264768-25264815)
chr2 (21-71)||(20626680-20626730)
chr2 (21-71)||(22256702-22256752)
chr2 (26-72)||(23805652-23805698)
chr2 (1-71)||(28775175-28775244)
chr2 (21-71)||(36981809-36981859)
chr2 (28-69)||(12635252-12635293)
chr2 (26-71)||(25875256-25875301)
chr2 (4-71)||(11230703-11230770)
chr2 (2-58)||(24826084-24826140)
chr2 (21-72)||(15634041-15634092)
chr2 (28-71)||(27344784-27344827)
chr2 (21-71)||(16936425-16936475)
chr2 (21-71)||(17007085-17007135)
chr2 (18-71)||(22284813-22284864)
chr2 (21-74)||(2602-2654)
chr2 (21-58)||(19794072-19794109)
chr2 (26-58)||(32466741-32466773)
[»] scaffold0529 (1 HSPs)
scaffold0529 (1-71)||(3780-3850)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-71)||(32009-32079)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-73)||(8026-8097)
[»] chr7 (63 HSPs)
chr7 (1-73)||(16419314-16419385)
chr7 (1-71)||(26009512-26009581)
chr7 (2-71)||(16478336-16478405)
chr7 (1-73)||(15950159-15950231)
chr7 (16-71)||(9999782-9999837)
chr7 (1-72)||(15440952-15441023)
chr7 (1-71)||(48622045-48622115)
chr7 (1-71)||(10264463-10264533)
chr7 (1-71)||(10990221-10990291)
chr7 (1-71)||(14250267-14250337)
chr7 (1-71)||(15928386-15928456)
chr7 (7-71)||(13759181-13759245)
chr7 (3-71)||(15516226-15516294)
chr7 (7-71)||(15759482-15759546)
chr7 (1-71)||(371928-371998)
chr7 (21-71)||(13036430-13036480)
chr7 (21-71)||(14419537-14419587)
chr7 (1-75)||(38783091-38783164)
chr7 (18-71)||(13910407-13910459)
chr7 (21-73)||(7283384-7283436)
chr7 (7-71)||(25124980-25125044)
chr7 (21-72)||(12247427-12247478)
chr7 (21-71)||(11580093-11580143)
chr7 (21-71)||(13321876-13321926)
chr7 (1-71)||(27108351-27108420)
chr7 (21-71)||(35095694-35095744)
chr7 (1-71)||(42055653-42055723)
chr7 (26-71)||(1936349-1936394)
chr7 (22-71)||(11288307-11288356)
chr7 (7-71)||(15862745-15862809)
chr7 (7-71)||(48756571-48756634)
chr7 (21-72)||(16212615-16212665)
chr7 (1-71)||(16773599-16773670)
chr7 (21-72)||(32493399-32493450)
chr7 (21-71)||(110598-110648)
chr7 (21-71)||(2029794-2029844)
chr7 (21-71)||(7293853-7293903)
chr7 (1-71)||(7823526-7823595)
chr7 (21-71)||(12116367-12116417)
chr7 (21-71)||(12369151-12369201)
chr7 (11-69)||(12759859-12759917)
chr7 (1-71)||(12900111-12900180)
chr7 (1-71)||(27101003-27101072)
chr7 (1-71)||(27177231-27177300)
chr7 (2-72)||(30261517-30261587)
chr7 (21-71)||(36053513-36053563)
chr7 (11-69)||(45451488-45451546)
chr7 (21-73)||(13573488-13573540)
chr7 (11-71)||(16569315-16569375)
chr7 (11-71)||(16596287-16596347)
chr7 (22-74)||(44866105-44866157)
chr7 (21-60)||(144510-144549)
chr7 (1-71)||(7830837-7830906)
chr7 (26-72)||(26068925-26068971)
chr7 (26-72)||(26069583-26069629)
chr7 (26-72)||(26093370-26093416)
chr7 (21-71)||(37941601-37941651)
chr7 (21-71)||(39046007-39046057)
chr7 (21-74)||(17816785-17816838)
chr7 (21-74)||(19050163-19050216)
chr7 (5-69)||(3060780-3060843)
chr7 (27-71)||(3895880-3895924)
chr7 (11-59)||(13862277-13862325)
[»] chr3 (66 HSPs)
chr3 (1-72)||(16933319-16933390)
chr3 (1-77)||(53771865-53771941)
chr3 (1-71)||(13954268-13954338)
chr3 (1-71)||(22276016-22276086)
chr3 (1-74)||(17062371-17062444)
chr3 (2-71)||(23079526-23079595)
chr3 (2-69)||(14219001-14219068)
chr3 (1-60)||(16821954-16822013)
chr3 (1-72)||(17187093-17187164)
chr3 (1-71)||(13067871-13067941)
chr3 (1-71)||(15467722-15467792)
chr3 (1-71)||(23493196-23493266)
chr3 (1-71)||(44229806-44229876)
chr3 (1-71)||(55317022-55317092)
chr3 (7-72)||(51960467-51960532)
chr3 (7-71)||(22143657-22143721)
chr3 (7-71)||(25059563-25059627)
chr3 (21-72)||(19232644-19232695)
chr3 (1-72)||(41270853-41270924)
chr3 (11-77)||(2845055-2845121)
chr3 (1-71)||(15576014-15576084)
chr3 (1-71)||(15619181-15619251)
chr3 (21-71)||(15856593-15856643)
chr3 (10-71)||(13818377-13818438)
chr3 (18-71)||(30153776-30153829)
chr3 (11-71)||(2050660-2050720)
chr3 (11-71)||(12029521-12029581)
chr3 (11-71)||(13836485-13836545)
chr3 (8-72)||(27841032-27841095)
chr3 (11-71)||(54037447-54037507)
chr3 (8-71)||(12257189-12257252)
chr3 (21-71)||(14841929-14841979)
chr3 (21-71)||(18896433-18896483)
chr3 (21-71)||(18911830-18911880)
chr3 (21-71)||(45582488-45582538)
chr3 (21-74)||(5240054-5240107)
chr3 (7-72)||(13839725-13839790)
chr3 (1-58)||(45861620-45861677)
chr3 (11-71)||(6146086-6146146)
chr3 (11-71)||(16181258-16181318)
chr3 (11-71)||(16995399-16995459)
chr3 (21-73)||(17522195-17522247)
chr3 (11-71)||(19570001-19570061)
chr3 (28-71)||(12799486-12799529)
chr3 (21-72)||(16741315-16741366)
chr3 (21-72)||(17955332-17955383)
chr3 (28-71)||(49233263-49233306)
chr3 (21-71)||(316820-316870)
chr3 (1-71)||(1467105-1467174)
chr3 (21-71)||(2448638-2448688)
chr3 (1-71)||(8275204-8275272)
chr3 (21-71)||(16743510-16743560)
chr3 (21-71)||(28559021-28559071)
chr3 (21-71)||(33342744-33342794)
chr3 (21-71)||(55513746-55513796)
chr3 (11-71)||(6153643-6153703)
chr3 (11-71)||(19260179-19260239)
chr3 (21-69)||(53897906-53897954)
chr3 (21-72)||(3993426-3993477)
chr3 (21-60)||(7854838-7854877)
chr3 (1-60)||(8268114-8268172)
chr3 (9-71)||(35124565-35124627)
chr3 (26-71)||(17102226-17102271)
chr3 (26-71)||(38528617-38528662)
chr3 (11-71)||(12559548-12559608)
chr3 (18-69)||(14285808-14285857)
[»] scaffold0472 (1 HSPs)
scaffold0472 (2-72)||(1-71)
[»] chr6 (50 HSPs)
chr6 (1-71)||(25951389-25951458)
chr6 (1-71)||(14625499-14625569)
chr6 (4-73)||(16814371-16814439)
chr6 (1-71)||(25176370-25176440)
chr6 (1-74)||(25898482-25898554)
chr6 (1-71)||(1649496-1649566)
chr6 (1-71)||(9477836-9477906)
chr6 (1-71)||(12415198-12415268)
chr6 (1-71)||(16232708-16232778)
chr6 (1-71)||(19610834-19610904)
chr6 (18-72)||(22225113-22225167)
chr6 (18-72)||(22250941-22250995)
chr6 (1-71)||(22256542-22256612)
chr6 (7-71)||(1556829-1556893)
chr6 (7-71)||(4991900-4991964)
chr6 (8-71)||(32276040-32276103)
chr6 (1-71)||(10489520-10489589)
chr6 (1-71)||(15741568-15741638)
chr6 (1-71)||(23995747-23995817)
chr6 (1-71)||(29869155-29869225)
chr6 (21-74)||(15863309-15863362)
chr6 (2-71)||(19300015-19300083)
chr6 (7-71)||(1657112-1657176)
chr6 (19-71)||(18001837-18001889)
chr6 (7-71)||(21774320-21774384)
chr6 (7-71)||(27653369-27653432)
chr6 (21-72)||(19982622-19982673)
chr6 (21-71)||(16086851-16086901)
chr6 (1-75)||(16375758-16375831)
chr6 (1-71)||(16555501-16555570)
chr6 (1-71)||(16632057-16632126)
chr6 (1-71)||(19630129-19630199)
chr6 (21-71)||(23148850-23148900)
chr6 (21-71)||(25633046-25633096)
chr6 (21-71)||(31629075-31629125)
chr6 (21-71)||(35008785-35008835)
chr6 (26-71)||(25743799-25743844)
chr6 (28-72)||(9276756-9276800)
chr6 (28-71)||(934040-934083)
chr6 (26-73)||(22441826-22441873)
chr6 (28-71)||(23978600-23978643)
chr6 (1-71)||(16383086-16383155)
chr6 (21-71)||(18086223-18086273)
chr6 (29-71)||(25912703-25912745)
chr6 (26-71)||(13620147-13620192)
chr6 (11-71)||(35014487-35014547)
chr6 (21-71)||(18399829-18399879)
chr6 (21-59)||(18571170-18571208)
chr6 (21-71)||(18822749-18822799)
chr6 (34-71)||(26090500-26090537)
[»] chr5 (49 HSPs)
chr5 (1-75)||(22365849-22365922)
chr5 (1-71)||(21072965-21073034)
chr5 (1-71)||(29187659-29187728)
chr5 (1-71)||(23543112-23543182)
chr5 (2-71)||(4199357-4199426)
chr5 (8-71)||(43442780-43442843)
chr5 (1-71)||(1218900-1218970)
chr5 (1-71)||(7426142-7426212)
chr5 (1-71)||(16537001-16537071)
chr5 (7-71)||(19500696-19500760)
chr5 (21-72)||(16106490-16106541)
chr5 (1-71)||(17470956-17471026)
chr5 (1-71)||(21232917-21232987)
chr5 (1-71)||(34940102-34940172)
chr5 (21-73)||(11584925-11584977)
chr5 (8-71)||(13180-13242)
chr5 (1-72)||(22882455-22882525)
chr5 (1-72)||(36989135-36989205)
chr5 (21-71)||(11211443-11211493)
chr5 (1-71)||(20623772-20623842)
chr5 (21-71)||(20712960-20713010)
chr5 (1-71)||(23329363-23329432)
chr5 (1-71)||(25899797-25899867)
chr5 (1-71)||(35582857-35582926)
chr5 (11-72)||(23980838-23980899)
chr5 (26-71)||(27181905-27181950)
chr5 (16-72)||(11343527-11343583)
chr5 (7-71)||(18777359-18777423)
chr5 (21-72)||(32951544-32951595)
chr5 (1-72)||(37053548-37053619)
chr5 (21-71)||(4866118-4866168)
chr5 (1-71)||(9729725-9729795)
chr5 (21-71)||(10777328-10777378)
chr5 (21-71)||(21205791-21205841)
chr5 (21-71)||(21651565-21651615)
chr5 (1-71)||(21931768-21931837)
chr5 (1-71)||(21937938-21938007)
chr5 (2-71)||(24617104-24617173)
chr5 (2-71)||(24746363-24746432)
chr5 (21-71)||(25427431-25427481)
chr5 (26-71)||(23515419-23515464)
chr5 (11-71)||(19406417-19406477)
chr5 (21-60)||(21646095-21646134)
chr5 (21-68)||(35790493-35790540)
chr5 (11-73)||(108206-108267)
chr5 (21-63)||(24475863-24475905)
chr5 (21-71)||(27010654-27010704)
chr5 (164-214)||(27134937-27134987)
chr5 (11-71)||(28262327-28262387)
[»] scaffold0810 (1 HSPs)
scaffold0810 (8-73)||(5673-5738)
[»] chr8 (48 HSPs)
chr8 (2-71)||(22906595-22906664)
chr8 (1-73)||(28837085-28837157)
chr8 (2-71)||(30121531-30121600)
chr8 (1-72)||(17142397-17142468)
chr8 (7-71)||(25123300-25123364)
chr8 (1-72)||(16673768-16673839)
chr8 (1-71)||(13720293-13720363)
chr8 (9-71)||(41247521-41247583)
chr8 (9-71)||(41248010-41248072)
chr8 (2-71)||(13661650-13661719)
chr8 (1-69)||(2545773-2545841)
chr8 (7-71)||(16196044-16196108)
chr8 (7-71)||(24928166-24928230)
chr8 (1-72)||(17353348-17353419)
chr8 (4-71)||(22005620-22005687)
chr8 (1-72)||(43686348-43686419)
chr8 (1-71)||(17431543-17431612)
chr8 (1-71)||(23512043-23512113)
chr8 (2-71)||(24549790-24549859)
chr8 (11-71)||(22221662-22221722)
chr8 (11-71)||(22228004-22228064)
chr8 (1-72)||(15318524-15318594)
chr8 (1-72)||(15498893-15498963)
chr8 (1-71)||(984050-984119)
chr8 (21-71)||(29760826-29760876)
chr8 (21-71)||(43372829-43372879)
chr8 (1-58)||(24660650-24660707)
chr8 (7-71)||(16878105-16878168)
chr8 (5-71)||(275293-275360)
chr8 (5-71)||(640489-640556)
chr8 (5-71)||(826295-826362)
chr8 (21-72)||(16404342-16404393)
chr8 (21-71)||(20653342-20653392)
chr8 (1-71)||(24105578-24105647)
chr8 (26-71)||(20529170-20529215)
chr8 (7-71)||(3430630-3430693)
chr8 (11-71)||(5238903-5238963)
chr8 (1-73)||(22088158-22088229)
chr8 (1-59)||(270739-270796)
chr8 (1-59)||(645124-645181)
chr8 (1-59)||(830859-830916)
chr8 (8-58)||(21843968-21844018)
chr8 (8-58)||(21851361-21851411)
chr8 (21-71)||(24716191-24716241)
chr8 (21-58)||(19992408-19992445)
chr8 (1-74)||(33532895-33532967)
chr8 (21-70)||(37612552-37612601)
chr8 (28-72)||(39116158-39116202)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-60)||(46419-46478)
scaffold0076 (1-71)||(39924-39993)
[»] scaffold0420 (1 HSPs)
scaffold0420 (4-72)||(7551-7618)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-72)||(131396-131467)
scaffold0028 (11-70)||(107144-107203)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-71)||(6356-6426)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-71)||(973-1043)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-71)||(20514-20584)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-71)||(31045-31114)
scaffold0008 (7-71)||(23553-23617)
[»] scaffold1714 (1 HSPs)
scaffold1714 (1-73)||(185-257)
[»] scaffold1615 (1 HSPs)
scaffold1615 (1-73)||(321-393)
[»] scaffold0467 (1 HSPs)
scaffold0467 (1-72)||(8813-8884)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-72)||(23118-23189)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-72)||(10116-10187)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-72)||(4579-4650)
scaffold0022 (21-71)||(111854-111904)
[»] scaffold0615 (1 HSPs)
scaffold0615 (1-71)||(5568-5638)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-71)||(14618-14688)
[»] scaffold0175 (3 HSPs)
scaffold0175 (1-71)||(17848-17918)
scaffold0175 (2-71)||(330-399)
scaffold0175 (11-71)||(5572-5632)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-71)||(20492-20562)
scaffold0139 (1-65)||(13433-13497)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-71)||(38426-38496)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-71)||(65730-65800)
scaffold0044 (8-75)||(39176-39242)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-71)||(137300-137370)
[»] scaffold1979 (1 HSPs)
scaffold1979 (7-72)||(103-168)
[»] scaffold0191 (1 HSPs)
scaffold0191 (16-73)||(6817-6874)
[»] scaffold0021 (3 HSPs)
scaffold0021 (7-72)||(89696-89761)
scaffold0021 (21-71)||(131561-131611)
scaffold0021 (1-71)||(167682-167751)
[»] scaffold0597 (1 HSPs)
scaffold0597 (7-71)||(321-385)
[»] scaffold0077 (3 HSPs)
scaffold0077 (1-69)||(2810-2878)
scaffold0077 (21-71)||(14819-14869)
scaffold0077 (21-71)||(36277-36327)
[»] scaffold0075 (1 HSPs)
scaffold0075 (7-71)||(33825-33889)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-71)||(82-152)
[»] scaffold0364 (1 HSPs)
scaffold0364 (21-71)||(17245-17295)
[»] scaffold0359 (1 HSPs)
scaffold0359 (21-71)||(2191-2241)
[»] scaffold0225 (1 HSPs)
scaffold0225 (21-71)||(23080-23130)
[»] scaffold0183 (2 HSPs)
scaffold0183 (1-71)||(7413-7483)
scaffold0183 (21-71)||(5001-5051)
[»] scaffold0167 (1 HSPs)
scaffold0167 (8-74)||(36102-36167)
[»] scaffold0078 (2 HSPs)
scaffold0078 (21-71)||(36423-36473)
scaffold0078 (11-71)||(42177-42237)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-71)||(36902-36972)
scaffold0023 (18-71)||(169288-169341)
scaffold0023 (21-74)||(202-256)
[»] scaffold0115 (1 HSPs)
scaffold0115 (2-71)||(3050-3119)
[»] scaffold0537 (1 HSPs)
scaffold0537 (21-73)||(782-834)
[»] scaffold0465 (1 HSPs)
scaffold0465 (7-71)||(9378-9442)
[»] scaffold0447 (1 HSPs)
scaffold0447 (7-71)||(353-417)
[»] scaffold0383 (1 HSPs)
scaffold0383 (7-71)||(3217-3281)
[»] scaffold0260 (2 HSPs)
scaffold0260 (7-71)||(9179-9243)
scaffold0260 (7-71)||(10718-10781)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-73)||(29156-29227)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-69)||(8724-8792)
[»] scaffold0184 (1 HSPs)
scaffold0184 (11-71)||(30607-30667)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-73)||(27599-27671)
scaffold0141 (1-71)||(23344-23414)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-73)||(87141-87213)
scaffold0049 (21-71)||(21045-21095)
[»] scaffold0018 (1 HSPs)
scaffold0018 (7-71)||(50554-50618)
[»] scaffold0016 (2 HSPs)
scaffold0016 (11-71)||(165088-165148)
scaffold0016 (21-69)||(165595-165643)
[»] scaffold0012 (1 HSPs)
scaffold0012 (21-73)||(246799-246851)
[»] scaffold0706 (1 HSPs)
scaffold0706 (26-73)||(5895-5942)
[»] scaffold0518 (1 HSPs)
scaffold0518 (1-72)||(10214-10284)
[»] scaffold0516 (1 HSPs)
scaffold0516 (1-72)||(11511-11582)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-71)||(16677-16745)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-72)||(32130-32200)
[»] scaffold0034 (2 HSPs)
scaffold0034 (12-71)||(41539-41598)
scaffold0034 (29-72)||(80737-80780)
[»] scaffold0031 (1 HSPs)
scaffold0031 (21-72)||(3-54)
[»] scaffold1542 (1 HSPs)
scaffold1542 (1-67)||(119-184)
[»] scaffold1500 (1 HSPs)
scaffold1500 (21-71)||(882-932)
[»] scaffold0892 (1 HSPs)
scaffold0892 (1-71)||(4226-4296)
[»] scaffold0686 (1 HSPs)
scaffold0686 (21-71)||(5206-5256)
[»] scaffold0551 (1 HSPs)
scaffold0551 (1-71)||(8459-8529)
[»] scaffold0413 (1 HSPs)
scaffold0413 (21-71)||(5471-5521)
[»] scaffold0335 (2 HSPs)
scaffold0335 (18-72)||(4937-4991)
scaffold0335 (21-74)||(6872-6925)
[»] scaffold0302 (1 HSPs)
scaffold0302 (21-71)||(12969-13019)
[»] scaffold0226 (1 HSPs)
scaffold0226 (7-73)||(12228-12293)
[»] scaffold0064 (1 HSPs)
scaffold0064 (21-71)||(63200-63250)
[»] scaffold0039 (1 HSPs)
scaffold0039 (5-59)||(11867-11921)
[»] scaffold0032 (3 HSPs)
scaffold0032 (21-71)||(107526-107576)
scaffold0032 (1-73)||(6269-6341)
scaffold0032 (1-73)||(12718-12790)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-59)||(63926-63984)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-71)||(44379-44449)
scaffold0017 (1-71)||(54682-54752)
[»] scaffold0011 (4 HSPs)
scaffold0011 (21-71)||(254190-254240)
scaffold0011 (21-71)||(260796-260846)
scaffold0011 (28-71)||(122520-122563)
scaffold0011 (11-58)||(187748-187795)
[»] scaffold0850 (1 HSPs)
scaffold0850 (28-73)||(4935-4980)
[»] scaffold0673 (2 HSPs)
scaffold0673 (22-71)||(6157-6206)
scaffold0673 (27-71)||(145-189)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-58)||(9453-9510)
[»] scaffold0266 (1 HSPs)
scaffold0266 (26-71)||(1978-2023)
[»] scaffold0132 (2 HSPs)
scaffold0132 (26-71)||(43230-43275)
scaffold0132 (21-71)||(14343-14393)
[»] scaffold0740 (1 HSPs)
scaffold0740 (11-71)||(5159-5219)
[»] scaffold0483 (1 HSPs)
scaffold0483 (7-71)||(230-294)
[»] scaffold0338 (1 HSPs)
scaffold0338 (11-71)||(9865-9925)
[»] scaffold0117 (1 HSPs)
scaffold0117 (11-59)||(10890-10938)
[»] scaffold0116 (1 HSPs)
scaffold0116 (11-71)||(30961-31021)
[»] scaffold0109 (1 HSPs)
scaffold0109 (7-71)||(45017-45081)
[»] scaffold0498 (1 HSPs)
scaffold0498 (30-73)||(9742-9785)
[»] scaffold1539 (1 HSPs)
scaffold1539 (21-71)||(418-468)
[»] scaffold0782 (1 HSPs)
scaffold0782 (2-71)||(369-439)
[»] scaffold0692 (1 HSPs)
scaffold0692 (21-71)||(4432-4482)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-71)||(266-335)
[»] scaffold0310 (1 HSPs)
scaffold0310 (21-71)||(5731-5781)
[»] scaffold0257 (1 HSPs)
scaffold0257 (7-69)||(6173-6234)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-71)||(22976-23045)
[»] scaffold0218 (1 HSPs)
scaffold0218 (21-71)||(4514-4564)
[»] scaffold0202 (1 HSPs)
scaffold0202 (1-71)||(21-90)
[»] scaffold0190 (1 HSPs)
scaffold0190 (26-72)||(10829-10875)
[»] scaffold0162 (3 HSPs)
scaffold0162 (21-71)||(7548-7598)
scaffold0162 (21-71)||(12595-12645)
scaffold0162 (21-71)||(25773-25823)
[»] scaffold0106 (1 HSPs)
scaffold0106 (21-71)||(48860-48910)
[»] scaffold0083 (1 HSPs)
scaffold0083 (11-72)||(15710-15772)
[»] scaffold0037 (2 HSPs)
scaffold0037 (29-71)||(24035-24077)
scaffold0037 (21-71)||(97701-97751)
[»] scaffold0001 (1 HSPs)
scaffold0001 (21-71)||(79199-79249)
[»] scaffold0598 (1 HSPs)
scaffold0598 (28-73)||(9828-9873)
[»] scaffold0361 (1 HSPs)
scaffold0361 (18-71)||(4020-4072)
[»] scaffold0213 (1 HSPs)
scaffold0213 (1-58)||(30007-30064)
[»] scaffold0068 (2 HSPs)
scaffold0068 (21-74)||(49009-49062)
scaffold0068 (21-74)||(62457-62510)
[»] scaffold0014 (1 HSPs)
scaffold0014 (22-71)||(86220-86269)
[»] scaffold0816 (1 HSPs)
scaffold0816 (21-65)||(2383-2427)
[»] scaffold0480 (2 HSPs)
scaffold0480 (11-71)||(4568-4628)
scaffold0480 (24-72)||(8216-8264)
[»] scaffold0120 (1 HSPs)
scaffold0120 (21-65)||(27342-27386)
[»] scaffold0035 (2 HSPs)
scaffold0035 (11-71)||(108774-108834)
scaffold0035 (11-71)||(117275-117335)
[»] scaffold1711 (1 HSPs)
scaffold1711 (7-58)||(722-773)
[»] scaffold0303 (1 HSPs)
scaffold0303 (21-71)||(3859-3910)
[»] scaffold0160 (1 HSPs)
scaffold0160 (21-60)||(872-911)
[»] scaffold0122 (1 HSPs)
scaffold0122 (21-72)||(19278-19329)
[»] scaffold0876 (1 HSPs)
scaffold0876 (21-71)||(648-698)
[»] scaffold0417 (1 HSPs)
scaffold0417 (21-71)||(15348-15398)
[»] scaffold0240 (1 HSPs)
scaffold0240 (21-71)||(8380-8430)
[»] scaffold0025 (1 HSPs)
scaffold0025 (27-69)||(149458-149500)
[»] scaffold0013 (1 HSPs)
scaffold0013 (21-71)||(153821-153871)
[»] scaffold0158 (1 HSPs)
scaffold0158 (26-72)||(26084-26132)


Alignment Details
Target: chr1 (Bit Score: 143; Significance: 4e-75; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 21662581 - 21662395
Alignment:
Q  72 gtttactttatccacacatttatctaagttatccatcccattggaactaaactaaactgaacccatttt-gtgtgcgagattataaagtacacttttggt 170  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  21662581 gtttactttatccacacatttatctaagttacccattccattggaactaaacaaaactgaacccatttttgtgtgtgagattataaagtacacttttggt 21662482  T
Q  171 tcaaatatccattttaaacctatcaatcaatcaacacactctattagataatactactaccaaacattgccattctctacacccatt 257  Q
    |||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  21662481 tcaaatatccattttacagctatcaatcaatcaacatactctattagataatactactagcaaacattgtcattctctacacccatt 21662395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21654515 - 21654447
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  21654515 cacaattaatcacacacaatcacaaaataaaagtaattaaaataaaactagctaaaaatcgggctgtta 21654447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9175414 - 9175344
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  9175414 cacaattaatcacatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcggactgttacag 9175344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17149382 - 17149453
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagct-aaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  17149382 cacaaataatcacacacaatcacacaataaaagtaattaaaataaaactagctaaaaaatcgggctgttaca 17149453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 41212895 - 41212958
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  41212895 cacatataatcacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacagtt 41212958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2117046 - 2117116
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  2117046 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 2117116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18059197 - 18059127
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18059197 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 18059127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 18595279 - 18595213
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18595279 taatcacacacaaacacataataaaagtaattaaaataaacctagctaaaaatcgggctgttacagt 18595213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20114787 - 20114717
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||||| | ||||||||    
T  20114787 cacaaataatcacacacaaacacataataaaagtaattaaaataaaactagctaaaaatcggactgttaca 20114717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22036252 - 22036322
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  22036252 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 22036322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24568184 - 24568114
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  24568184 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 24568114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29139729 - 29139799
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  29139729 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 29139799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45052213 - 45052283
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  45052213 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 45052283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 5071830 - 5071764
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| || |||||||||    
T  5071830 taatcacacacaaacacataataaaagtaattaaaataaacctagctaaaaatcgggttgttacagt 5071764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20255139 - 20255209
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  20255139 cacaaataatcacacacaaacacataataaaagtaattgaaataaatctagctaaaaatcgggctgttaca 20255209  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 19961977 - 19961909
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  19961977 acaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 19961909  T

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Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 22228622 - 22228687
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||| |||| || | ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22228622 taatcacacacaaacagataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 22228687  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 20346856 - 20346920
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||| || |||| ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  20346856 taatcacatataaacacataataaaagtaattaaaataaatctaactaaaaatcgggctgttaca 20346920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 13104008 - 13104058
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13104008 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 13104058  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 20887208 - 20887158
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  20887208 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 20887158  T

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Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 27329149 - 27329099
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  27329149 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 27329099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 35521706 - 35521656
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  35521706 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 35521656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 41395048 - 41395101
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  41395048 aatcacataataaaagtaattaaaataaatctagctaaaaatcggactgttaca 41395101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 13583262 - 13583199
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  13583262 taatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 13583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 44034381 - 44034330
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    |||||||| |||| |||| ||||||||||||||||||||| |||||||||||    
T  44034381 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaa 44034330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 46524203 - 46524254
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  46524203 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttacag 46524254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7640375 - 7640305
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| | |||||||||   ||||||||||    
T  7640375 cacaaataatcacacacaaacacataataaaagtaattaaaataaatcgagctaaaaaatcggctgttaca 7640305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 15860857 - 15860807
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| |||| ||||||||||||| || |||||||    
T  15860857 cacacaataaaagtaattaaattaaatctagctaaaaatcgggttgttaca 15860807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17005459 - 17005528
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  17005459 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 17005528  T

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Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 20913881 - 20913931
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  20913881 cacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 20913931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 20932194 - 20932244
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  20932194 cacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 20932244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 21719119 - 21719169
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  21719119 cacataataaaagtaattaaaataaatctagctaaaaattgggctgttaca 21719169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 21860877 - 21860935
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| ||| ||||    
T  21860877 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggcagtta 21860935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22238238 - 22238180
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||    
T  22238238 cacaaataatcacacacaaacacataataaaagtaattgaaataaatctagctaaaaat 22238180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24521909 - 24521840
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  24521909 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 24521840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38054549 - 38054480
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  38054549 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 38054480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42443031 - 42442962
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  42443031 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 42442962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 51453275 - 51453344
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||  ||| |||| |||| ||||||| ||||||||||||| ||| ||||||||||| ||||||||    
T  51453275 acaattaaatacacacaaacacataataaaaataattaaaataaatctaactaaaaatcagactgttaca 51453344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 20348395 - 20348458
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||| || |||| ||||||||||||| ||||||| ||||||||||||| || |||||||    
T  20348395 taatcacatataaacacataataaaagtaatt-aaataaatctagctaaaaatcgggttgttaca 20348458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 22030921 - 22030866
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    ||||||||||||| |||| |||| | ||||||||||||||||||| |||||||||||    
T  22030921 acaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaa 22030866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 49968518 - 49968578
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||| ||||||| || |||||||    
T  49968518 cacatataaacacataataaaagtaattaaaataaatctagcgaaaaatcgggttgttaca 49968578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 20446535 - 20446585
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||| ||||||||||||||||  |||||||||||| ||||||||||    
T  20446535 cacataatagaagtaattaaaataaatttagctaaaaatcgggctgttaca 20446585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 20532299 - 20532349
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||| ||||||||||||||||  |||||||||||| ||||||||||    
T  20532299 cacataatagaagtaattaaaataaatttagctaaaaatcgggctgttaca 20532349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 41219279 - 41219317
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  41219279 cacataataaaagtaattaaaataaatctagctaaaaat 41219317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 37843857 - 37843825
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaa 58  Q
    ||||||||||||||||||||| |||||||||||    
T  37843857 aataaaagtaattaaaataaatctagctaaaaa 37843825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10645028 - 10645098
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10645028 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcgggctgttaca 10645098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18249015 - 18249085
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18249015 cacaattaatcacatacaatcacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 18249085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 9296347 - 9296416
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagttta 76  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9296347 taatcacacacaaacacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttacagttta 9296416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18169786 - 18169856
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  18169786 cacaattaatcacacacaattacacaataaaagtaattaaaagaaaactagctaaaaattgggctgttaca 18169856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 45631622 - 45631558
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  45631622 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 45631558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 37477980 - 37478047
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  37477980 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacagtt 37478047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 8056693 - 8056759
Alignment:
Q  5 attaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  8056693 attaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 8056759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15271743 - 15271673
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  15271743 cacaaataatcacacacaaacacataataacagtaattaaaataaatctagctaaaaatcaggctgttaca 15271673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22351504 - 22351434
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  22351504 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 22351434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8378982 - 8379058
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtttac 77  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||| |||||||||| |||||    
T  8378982 cacaaataatcacacacaaacacataataaaagtaattgaaataaatctagctaaaaatcgggctgttacactttac 8379058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41063429 - 41063359
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| |||||||||||    
T  41063429 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttacag 41063359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6401039 - 6400969
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| | || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  6401039 cacaaataatcacacaaaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 6400969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10489368 - 10489438
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| |||||||||||||||||||||  |||||||||||| ||||||||||    
T  10489368 cacaaataatcacacacaaacacataataaaagtaattaaaataaacatagctaaaaatcgggctgttaca 10489438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15293794 - 15293724
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| | || |||| ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  15293794 cacaattaatcacacagaaacacataataaaagtaattaaaataaatctagctaaaaattgggctgttaca 15293724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 26681021 - 26681074
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  26681021 aatcacacaataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 26681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 14996957 - 14997021
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||||    
T  14996957 taatcacacacaaacacataataaaagtaattaaaataaatctagttaaaaatcgggctgttaca 14997021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 21958841 - 21958781
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  21958841 cacatataaacacacaataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 21958781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 53704123 - 53704063
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  53704123 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 53704063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 53907121 - 53907057
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  53907121 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 53907057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 122748 - 122798
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  122748 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 122798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9796042 - 9796112
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| ||||||||  ||| |||| || |||||||||||||||||| ||||||||||||| ||||||||||    
T  9796042 cacaaataatcacacgcaaacacataacaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 9796112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14952593 - 14952666
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagct--aaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||  ||||||| |||||||||||    
T  14952593 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaaaatcgggctgttacag 14952666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15286685 - 15286615
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||   || |||| ||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  15286685 cacaattaatcacactgaaacacataataaaagtaattaaaataaatctagctaaaaatcgggccgttaca 15286615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 16523664 - 16523714
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  16523664 cacataataaaagtaattaaaataaatctagcgaaaaatcaggctgttaca 16523714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 18286558 - 18286508
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18286558 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 18286508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26339835 - 26339904
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| |||| |||||||| ||||||||||    
T  26339835 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagttaaaaatcgggctgttaca 26339904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 39120978 - 39120928
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  39120978 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 39120928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 44056802 - 44056852
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  44056802 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 44056852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47358459 - 47358529
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||| ||||||||||||| ||||||||||||| | ||||||||    
T  47358459 cacaaataatcacacacaaacacataataaaaataattaaaataaacctagctaaaaatcggactgttaca 47358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 9290476 - 9290537
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtt 68  Q
    |||||||| | || |||||||||||||||||||||||||| ||||||||||||  |||||||    
T  9290476 taatcacacaaaaacacacaataaaagtaattaaaataaatctagctaaaaattgggctgtt 9290537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 13247291 - 13247351
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  13247291 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 13247351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 15000984 - 15001048
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| |||| ||||||||  |||||||||    
T  15000984 taatcacacacaaacacataataaaagtaattaaaataaatctagttaaaaatcgagctgttaca 15001048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 25118564 - 25118512
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||| ||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  25118564 cacataataaaagtaattaaaataaatctagctataaatcgggctgttacagt 25118512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 7131485 - 7131434
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| ||||||||||||  |||||||||||    
T  7131485 cacataataaaagtaattaaaataaatctagctaaaaattgggctgttacag 7131434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 54047272 - 54047229
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  54047272 taaaagtaattaaaataaatctagctaaaaatcgggctgttaca 54047229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 8871833 - 8871783
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  8871833 cacataataaaagtaattaaaataaatctaactaaaaatcgggctgttaca 8871783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 13047669 - 13047619
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  13047669 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 13047619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16327385 - 16327315
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||| ||| ||||||||||||| ||| ||||||||| ||||||||||    
T  16327385 cacaaataatcacacacaaacacataattaaaataattaaaataaacctaactaaaaatcgggctgttaca 16327315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27954856 - 27954925
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  27954856 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 27954925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 39467805 - 39467855
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  39467805 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 39467855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 44347709 - 44347759
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  44347709 cacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 44347759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 34396150 - 34396195
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  34396150 aataaaagtaattaaaataaatctagctaaaaatcggactgttaca 34396195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 54117643 - 54117598
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  54117643 aataaaagtaattaaaataaatctagctaaaaattgggctgttaca 54117598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 16733059 - 16733114
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtttac 77  Q
    ||||||||||| |||||||||||||| ||||||||||||| | |||||||| |||||    
T  16733059 cacacaataaa-gtaattaaaataaatctagctaaaaatcggactgttacactttac 16733114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 45458234 - 45458174
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||||||||||||||| |||   ||||||| ||||||||||    
T  45458234 cacatataaacacacaataaaagtaattaaaataaatctaatgaaaaatcgggctgttaca 45458174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 12836584 - 12836534
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||| ||||||||| || |||||||    
T  12836584 cacataataaaagtaattaaaataaatctaactaaaaatcgggttgttaca 12836534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 14499625 - 14499574
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||| ||||||  ||||||||||||| ||||||||||||| ||||||||||    
T  14499625 aatcacataataaa--taattaaaataaatctagctaaaaatcgggctgttaca 14499574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 5681895 - 5681859
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaa 57  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  5681895 cacataataaaagtaattaaaataaatctagctaaaa 5681859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 23269303 - 23269244
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || ||||||||||||||||||||||||||  ||||  |||||| ||||||||||    
T  23269303 cacatataaacacacaataaaagtaattaaaataaatatagc-gaaaatcgggctgttaca 23269244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33128887 - 33128959
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33128887 cacaattaatcacacacaatcacacaataaaagtaattaaaataaaactagctaaaaatcgggctgttacagt 33128959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5888079 - 5888010
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  5888079 cacaattaatcacatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcgggctgttaca 5888010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19886104 - 19886035
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  19886104 cacaattaatcacatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcgggctgttaca 19886035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34825280 - 34825350
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  34825280 cacaattaatcacacacaatcacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 34825350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38703874 - 38703801
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  38703874 cacaaataatcacacacaaacacagaataaaagtaattaaaataaatctagctaaaaatcgggctgttacagtt 38703801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 42535470 - 42535535
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||| |||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  42535470 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcaggctgttacag 42535535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 23777481 - 23777414
Alignment:
Q  4 aattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23777481 aattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 23777414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20015831 - 20015901
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  20015831 cacaaataatcacacacaaacacataataaaagtaattaaaataaacctagctaaaaatcgggctgttaca 20015901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23820875 - 23820945
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| |||||||||| || ||||||||||    
T  23820875 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaattcgggctgttaca 23820945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23829954 - 23830024
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| |||||||||| || ||||||||||    
T  23829954 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaattcgggctgttaca 23830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42177407 - 42177337
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  42177407 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 42177337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 14905893 - 14905829
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  14905893 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 14905829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21273481 - 21273409
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  21273481 cacaaataatcacacacaaacacataataaaagtaattgaaataaatctagctaaaaatcgggctgttacagt 21273409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17396101 - 17396031
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||  |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  17396101 cacaaataatcacccacaaacacataataaaagtaattaaaataaacctagctaaaaatcgggctgttaca 17396031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19688850 - 19688780
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| | || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  19688850 cacaaataatcacacataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 19688780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21142691 - 21142761
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  21142691 cacaaataatcacacacaaacacataataaaagtaattgaaataaatctagctaaaaatcgggctgttaca 21142761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21918853 - 21918923
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| |||||||||||||||||||||  |||||||||||| ||||||||||    
T  21918853 cacaaataatcacacacaaacacataataaaagtaattaaaataaatttagctaaaaatcgggctgttaca 21918923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23774952 - 23775022
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| | || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23774952 cacaaataatcacacaaaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 23775022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 463576 - 463629
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  463576 cacaaaataaaagtaattaaaataaatctagctaaaaatcgggctgttacagtt 463629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25419926 - 25419869
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| |||||||||||    
T  25419926 cacaattaatcacaaacaaacacataataaaagtaattaaaataaatctagctaaaaa 25419869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 17367679 - 17367743
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  17367679 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 17367743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 22863773 - 22863833
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  22863773 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 22863833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 9652282 - 9652232
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  9652282 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 9652232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22512620 - 22512551
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  22512620 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 22512551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24685217 - 24685148
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||| | ||||||||||    
T  24685217 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaaacgggctgttaca 24685148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 25213890 - 25213940
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  25213890 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 25213940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 43642360 - 43642310
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  43642360 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 43642310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 12729203 - 12729267
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| |||||||||||    
T  12729203 taatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttacag 12729267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 3798048 - 3797985
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  3798048 taatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 3797985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 8944657 - 8944720
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  8944657 taatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 8944720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 23836079 - 23836019
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||||||||||||||| | ||||||||||| || |||||||    
T  23836079 cacatataaacacacaataaaagtaattaaaataaatccagctaaaaatcgggttgttaca 23836019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 25264815 - 25264768
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  25264815 aataaaagtaattaaaataaatctagctaaaaatcggactgttacagt 25264768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 20626730 - 20626680
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||||||||||||||||||||  |||||||||||| ||||||||||    
T  20626730 cacataataaaagtaattaaaataaatttagctaaaaatcgggctgttaca 20626680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 22256702 - 22256752
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  22256702 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 22256752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 23805698 - 23805652
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  23805698 aataaaattaattaaaataaatctagctaaaaatcgggctgttacag 23805652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28775244 - 28775175
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  28775244 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 28775175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 36981859 - 36981809
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||| |||||||| ||||||| ||||||||||||||||||||||||    
T  36981859 cacaaaatacaagtaattgaaataaatctagctaaaaatcaggctgttaca 36981809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 12635293 - 12635252
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  12635293 taaaagtaattaaaataaatctagctaaaaatcgggctgtta 12635252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 25875301 - 25875256
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||| |||||||||| ||||||||||||| ||||||||||    
T  25875301 aataaaagtagttaaaataaatctagctaaaaatcgggctgttaca 25875256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 11230770 - 11230703
Alignment:
Q  4 aattaatcacatacaatcacacaataaaagtaattaaaataaaactagcta-aaaatcaggctgttaca 71  Q
    ||||||||||| |||| |||| | ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  11230770 aattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaaatcgggctgttaca 11230703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 24826140 - 24826084
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    ||||||||| |||  ||| ||||||||||| |||||||||||||| |||||||||||    
T  24826140 acaattaataacacgcaaacacacaataaaggtaattaaaataaatctagctaaaaa 24826084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 15634041 - 15634092
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| |||||||||| || | |||||||||    
T  15634041 cacataataaaagtaattaaaataaatctagctaaaagtcggactgttacag 15634092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 27344827 - 27344784
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||    
T  27344827 taaaagtaattaaaataaatctagctaaaaattgggctgttaca 27344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 16936425 - 16936475
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||| | ||||||| ||||||||||    
T  16936425 cacataataaaagtaattaaaataaatctaacgaaaaatcgggctgttaca 16936475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 17007085 - 17007135
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||| | ||||||| ||||||||||    
T  17007085 cacataataaaagtaattaaaataaatctaacgaaaaatcgggctgttaca 17007135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 22284813 - 22284864
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||| ||||||  ||||||||||||| ||||||||||||| ||||||||||    
T  22284813 aatcacataataaa--taattaaaataaatctagctaaaaatcgggctgttaca 22284864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 2654 - 2602
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||||||||||| ||||||||||||| ||| | ||||||| |||||||||||||    
T  2654 cacacaataaaaataattaaaataaatctaac-aaaaatcgggctgttacagtt 2602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 19794109 - 19794072
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  19794109 cacataataaaagtaattaaaataaatctagctaaaaa 19794072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 32466741 - 32466773
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaa 58  Q
    ||||||||||||||||||||| |||||||||||    
T  32466741 aataaaagtaattaaaataaatctagctaaaaa 32466773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3780 - 3850
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3780 cacaattaatcacacacaatcacacaataaaagtaattaaaataaaactagctaaaaatcgggctgttaca 3850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32079 - 32009
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32079 cacaattaatcacacacaatcacacaataaaagtaattaaaataaaactagctaaaaatcgggctgttaca 32009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8026 - 8097
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  8026 cacaattaatcacatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcgggctgttacagt 8097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16419314 - 16419385
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  16419314 cacaattaatcacatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcgggctgttacagt 16419385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26009581 - 26009512
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  26009581 cacaattaatcacatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcgggctgttaca 26009512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 16478405 - 16478336
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  16478405 acaattaatcacacacaatcacataataaaagtaattaaaataaaactagctaaaaatcgggctgttaca 16478336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15950231 - 15950159
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  15950231 cacaattaatcacacacaatcacacaataaaagtaattgaaataaatctagctaaaaatcgggctgttacagt 15950159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 9999837 - 9999782
Alignment:
Q  16 acaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9999837 acaatcacacaataaaagtaattaaaataaaactagctaaaaatcgggctgttaca 9999782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15441023 - 15440952
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  15441023 cacaattaatcacacacaaacacataataaaagtaattaaaataaacctagctaaaaatcgggctgttacag 15440952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 48622115 - 48622045
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  48622115 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 48622045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10264463 - 10264533
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  10264463 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 10264533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10990221 - 10990291
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||| |||| |||||||| ||||||||||    
T  10990221 cacaattaatcacacacaatcacataataaaagtaattgaaataaatctagataaaaatcgggctgttaca 10990291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14250337 - 14250267
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  14250337 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 14250267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15928386 - 15928456
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  15928386 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 15928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 13759181 - 13759245
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13759181 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 13759245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 15516294 - 15516226
Alignment:
Q  3 caattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||| ||||  ||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  15516294 caattaatcacacacaaatacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 15516226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 15759546 - 15759482
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  15759546 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 15759482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 371928 - 371998
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| | || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  371928 cacaaataatcacacataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 371998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 13036480 - 13036430
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13036480 cacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 13036430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 14419587 - 14419537
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  14419587 cacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 14419537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38783164 - 38783091
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagttt 75  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  38783164 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttacagttt 38783091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 13910459 - 13910407
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  13910459 aatcacacaataaaagtaattaaa-taaaactagctaaaaatcgggctgttaca 13910407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 7283436 - 7283384
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  7283436 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacagt 7283384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 25124980 - 25125044
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||||    
T  25124980 taatcacacacaaacacataataaaagtaattaaaataaatctagttaaaaatcgggctgttaca 25125044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 12247478 - 12247427
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  12247478 cacataataaaagtaattaaaataaatctagcgaaaaatcaggctgttacag 12247427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 11580143 - 11580093
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  11580143 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 11580093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 13321876 - 13321926
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13321876 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 13321926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27108420 - 27108351
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  27108420 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 27108351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 35095694 - 35095744
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  35095694 cacataataaaagtaattaaaataaatctagctaaaaatcagactgttaca 35095744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42055723 - 42055653
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||| ||| |||| |||| |||||||||||||||||||||  |||||||||||| ||||||||||    
T  42055723 cacaaataattacacacaaacacataataaaagtaattaaaataaatatagctaaaaatcgggctgttaca 42055653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 1936394 - 1936349
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  1936394 aataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 1936349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 11288307 - 11288356
Alignment:
Q  22 acacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  11288307 acacaataaaagtaattaaaataaatctagcgaaaaatcagactgttaca 11288356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 15862745 - 15862809
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| || |||| |||| ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  15862745 taatcgcacacaaacacataataaaagtaattaaaataaatctagctaaaaatcggactgttaca 15862809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 48756634 - 48756571
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  48756634 taatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 48756571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 16212615 - 16212665
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  16212615 cacataataaaagtaattaaaataaatctagctaaaaatc-ggctgttacag 16212665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16773670 - 16773599
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagcta-aaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||| ||||||||||||| ||||||| |||||| ||||||||||    
T  16773670 cacaaataatcacacacaaacacataataaaaataattaaaataaatctagctaaaaaatcgggctgttaca 16773599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 32493450 - 32493399
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| |||||||||||||  ||||||||||    
T  32493450 cacataataaaagtaattaaaataaatctagctaaaaatcgagctgttacag 32493399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 110648 - 110598
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||||||||||||||||||||  |||||||||||| ||||||||||    
T  110648 cacataataaaagtaattaaaataaatatagctaaaaatcgggctgttaca 110598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 2029794 - 2029844
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| |||| |||||||| ||||||||||    
T  2029794 cacataataaaagtaattaaaataaatctagttaaaaatcgggctgttaca 2029844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 7293853 - 7293903
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  7293853 cacataataaaaataattaaaataaatctagctaaaaatctggctgttaca 7293903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7823526 - 7823595
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  7823526 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 7823595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 12116367 - 12116417
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  12116367 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 12116417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 12369201 - 12369151
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  12369201 cacataataaaagttattaaaataaatctagctaaaaatcgggctgttaca 12369151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 12759859 - 12759917
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| || |||||    
T  12759859 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgtta 12759917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12900111 - 12900180
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  12900111 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 12900180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27101072 - 27101003
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  27101072 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 27101003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27177231 - 27177300
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  27177231 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 27177300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 30261587 - 30261517
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| |||||||| |||| |||| ||| | | ||||||||||||| ||||||||||||| |||||||||||    
T  30261587 acaaataatcacacacaaacacataattagaataattaaaataaacctagctaaaaatcgggctgttacag 30261517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 36053513 - 36053563
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  36053513 cacataataaaagtaattaaaataaatctagctaaaaatcggactgttaca 36053563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 45451546 - 45451488
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| | ||||||    
T  45451546 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcggactgtta 45451488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 13573488 - 13573540
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||| ||||||| ||||||||||||| ||||| ||||||| ||||||||||||    
T  13573488 cacataataaaaataattaaaataaatctagcaaaaaatcgggctgttacagt 13573540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 16569375 - 16569315
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||| ||||||||||| ||||| ||||||  ||||||||||    
T  16569375 cacatataaacacacaataaaagtgattaaaataaatctagcgaaaaattgggctgttaca 16569315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 16596287 - 16596347
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||| ||||||||||| ||||| ||||||  ||||||||||    
T  16596287 cacatataaacacacaataaaagtgattaaaataaatctagcgaaaaattgggctgttaca 16596347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 44866105 - 44866157
Alignment:
Q  22 acacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    ||||||||||||||||||||||||| ||| | ||||||| || ||||||||||    
T  44866105 acacaataaaagtaattaaaataaatctaacgaaaaatcgggttgttacagtt 44866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 144510 - 144549
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatc 60  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  144510 cacataataaaagtaattaaaataaatctagctaaaaatc 144549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7830837 - 7830906
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||| ||||||||  ||||||||||    
T  7830837 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctaactaaaaattgggctgttaca 7830906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26068971 - 26068925
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||||||    
T  26068971 aataaaagtaattaaaataaatctaacgaaaaatcgggctgttacag 26068925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26069629 - 26069583
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||||||    
T  26069629 aataaaagtaattaaaataaatctaacgaaaaatcgggctgttacag 26069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 26093416 - 26093370
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||||||    
T  26093416 aataaaagtaattaaaataaatctaacgaaaaatcgggctgttacag 26093370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 37941601 - 37941651
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||| ||| ||||||||||||| ||||||||||||| ||||||||||    
T  37941601 cacataattaaaataattaaaataaatctagctaaaaatcgggctgttaca 37941651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 39046057 - 39046007
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||| ||||||||| | ||||||||    
T  39046057 cacataataaaagtaattaaaataaatctaactaaaaatcggactgttaca 39046007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 17816838 - 17816785
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||| |||||||| |||||||||||| |||||| |||||| || ||||||||||    
T  17816838 cacataataaaagcaattaaaataaatctagctgaaaatcgggttgttacagtt 17816785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 19050163 - 19050216
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||| |||||||| |||||||||||| |||| | |||||| |||||||||||||    
T  19050163 cacataataaaagcaattaaaataaatctagttgaaaatcgggctgttacagtt 19050216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 3060780 - 3060843
Alignment:
Q  5 attaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||||||||||| || || | |||||| |||||||||||||| ||||||||||||  ||||||||    
T  3060780 attaatcacatataaacatataataaa-gtaattaaaataaatctagctaaaaattgggctgtta 3060843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 3895880 - 3895924
Alignment:
Q  27 ataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||| |||||||||| || || |||||||    
T  3895880 ataaaagtaattaaaataaatctagctaaaagtcgggttgttaca 3895924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 13862325 - 13862277
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    |||||| || |||| ||||||||||||||||||||| ||| ||||||||    
T  13862325 cacatagaaacacataataaaagtaattaaaataaatctacctaaaaat 13862277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16933390 - 16933319
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  16933390 cacaattaatcacacacaatcacacaataaaagtaattaaaataaaactagttaaaaatcgggctgttacag 16933319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 53771865 - 53771941
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtttac 77  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  53771865 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacagtttac 53771941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13954338 - 13954268
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13954338 cacaaataatcacacacaaccacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 13954268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22276016 - 22276086
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  22276016 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 22276086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17062371 - 17062444
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  17062371 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacagtt 17062444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 23079595 - 23079526
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  23079595 acaattaatcacacacaaacacacaataaaggtaattaaaataaatctagctaaaaatcgggctgttaca 23079526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 14219068 - 14219001
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  14219068 acaattaatcacaaacaaacacacaataaaggtaattaaaataaatctagctaaaaatcgggctgtta 14219001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16821954 - 16822013
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatc 60  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  16821954 cacaattaatcacacacaatcacacaataaaaataattaaaataaatctagctaaaaatc 16822013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 17187093 - 17187164
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  17187093 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 17187164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13067871 - 13067941
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13067871 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 13067941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15467792 - 15467722
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  15467792 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 15467722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23493196 - 23493266
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23493196 cacaaataatcacaaacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 23493266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44229806 - 44229876
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  44229806 cacaaataatcacagacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 44229876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 55317022 - 55317092
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||||    
T  55317022 cacaaataatcacatacaaacacataataaaagtaattaaaataaacctagttaaaaatcgggctgttaca 55317092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 51960532 - 51960467
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  51960532 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 51960467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 22143721 - 22143657
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  22143721 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 22143657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 25059563 - 25059627
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  25059563 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 25059627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 19232644 - 19232695
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  19232644 cacataataaaagtaattaaaataaatctagctaaaaatcaggctgttacag 19232695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41270853 - 41270924
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||| | |||||||||||    
T  41270853 cacaaataatcacacacaaacacataataaaagtaattaaaataaacctagctaaaaaacgggctgttacag 41270924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 2845055 - 2845121
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtttac 77  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  2845055 cacatataaacacataataaaagtaattaaaataaatctagctaaaaattgggctgttacagtttac 2845121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15576014 - 15576084
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  15576014 cacaaataatcacacacaaacacataataaaagtaattaaaagaaatctagctaaaaatcgggctgttaca 15576084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15619181 - 15619251
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| |||||||||||||  |||||||||    
T  15619181 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgagctgttaca 15619251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 15856643 - 15856593
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15856643 cacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 15856593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 13818377 - 13818438
Alignment:
Q  10 tcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13818377 tcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 13818438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 30153776 - 30153829
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  30153776 aatcacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 30153829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 2050660 - 2050720
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  2050660 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 2050720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 12029581 - 12029521
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  12029581 cacatataaacacaaaataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 12029521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 13836485 - 13836545
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  13836485 cacatataaacacacaataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 13836545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 27841032 - 27841095
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||| | ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  27841032 aatcacaaataatcacataataaaagtaattaaa-taaaactagctaaaaatcgggctgttacag 27841095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 54037507 - 54037447
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  54037507 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 54037447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 12257252 - 12257189
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  12257252 aatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 12257189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 14841979 - 14841929
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  14841979 cacacaataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 14841929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 18896483 - 18896433
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  18896483 cacacaataaaagtaattaaattaaatctagctaaaaatcgggctgttaca 18896433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 18911830 - 18911880
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18911830 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 18911880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 45582488 - 45582538
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  45582488 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 45582538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 5240107 - 5240054
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||| ||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  5240107 cacataataaaagtaattaaaataaatctagctgaaaatcgggctgttacagtt 5240054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 13839725 - 13839790
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||| | |||| |||| ||||||||||||||||||||| ||||||||||||| || ||||||||    
T  13839725 taatcaaacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttacag 13839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45861620 - 45861677
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| |||||||||||    
T  45861620 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaa 45861677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 6146146 - 6146086
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||||||||||||||| ||| | ||||||| ||||||||||    
T  6146146 cacatataaacacacaataaaagtaattaaaataaatctaacgaaaaatcgggctgttaca 6146086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 16181318 - 16181258
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  16181318 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 16181258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 16995459 - 16995399
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||| |||||||||||| |||||||    
T  16995459 cacatataaacacataataaaagtaattaaaataaatctaactaaaaatcaggttgttaca 16995399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 17522247 - 17522195
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||| ||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  17522247 cacataataaaagtaattaaaataaatctagcgaaaaatcgggctgttacagt 17522195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 19570061 - 19570001
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  19570061 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 19570001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 12799486 - 12799529
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  12799486 taaaagtaattaaaataaatctagctaaaaatcgggctgttaca 12799529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 16741366 - 16741315
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  16741366 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttacag 16741315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 17955383 - 17955332
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| |||| |||||||||||||||| ||||||||||||| |||||||||||    
T  17955383 cacataatagaagtaattaaaataaatctagctaaaaatcgggctgttacag 17955332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 49233263 - 49233306
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  49233263 taaaagtaattaaaataaatctagctaaaaatcgggctgttaca 49233306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 316870 - 316820
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| |||||| |||||| ||||||||||    
T  316870 cacataataaaagtaattaaaataaatctagctgaaaatcgggctgttaca 316820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1467174 - 1467105
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||  |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  1467174 cacaattaatcacccacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 1467105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 2448688 - 2448638
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  2448688 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 2448638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8275272 - 8275204
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  8275272 cacaaataatcacacacaaacacataataaaagtaatt-aaataaatctagctaaaaatc-ggctgttaca 8275204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 16743560 - 16743510
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  16743560 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 16743510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 28559021 - 28559071
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  28559021 cacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 28559071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 33342744 - 33342794
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  33342744 cacataataaaagtaattaaaataaatctagctaaaaattgggctgttaca 33342794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 55513746 - 55513796
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  55513746 cacataataaaagtaattaaaataaatctagctaaaaatcggactgttaca 55513796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 6153703 - 6153643
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || ||||||||||||||||| |||||||| ||| | ||||||| ||||||||||    
T  6153703 cacatataaacacacaataaaagtaatgaaaataaatctaacgaaaaatcgggctgttaca 6153643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 19260239 - 19260179
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||| ||||||||||||| ||||||||||||  ||||||||||    
T  19260239 cacatataaacacataataaaaataattaaaataaatctagctaaaaattgggctgttaca 19260179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 53897954 - 53897906
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||| ||||||||||||||||||||| |||| |||||||| ||||||||    
T  53897954 cacataataaaagtaattaaaataaatctagttaaaaatcgggctgtta 53897906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 3993426 - 3993477
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| |||||||||||||||||||||  ||| |||||||| |||||||||||    
T  3993426 cacataataaaagtaattaaaataaatttagttaaaaatcgggctgttacag 3993477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 7854838 - 7854877
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatc 60  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  7854838 cacataataaaagtaattaaaataaatctagctaaaaatc 7854877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8268172 - 8268114
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatc 60  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| |||||||||||||    
T  8268172 cacaaataatcacacacaaacacataataaaagtaatt-aaataaatctagctaaaaatc 8268114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 35124565 - 35124627
Alignment:
Q  9 atcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| || ||||||||||||||||||||||||||   ||| ||||||| || |||||||    
T  35124565 atcacatataaacacacaataaaagtaattaaaataaataaagcgaaaaatcgggttgttaca 35124627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 17102226 - 17102271
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||| | ||||||| ||||||||||    
T  17102226 aataaaagtaattaaaataaatctaacgaaaaatcgggctgttaca 17102271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 38528617 - 38528662
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||| ||||||||| |||| |||||    
T  38528617 aataaaagtaattaaaataaatctaactaaaaatcgggctattaca 38528662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 12559608 - 12559548
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| |||||||  |||||||||||| ||||| ||||||| ||||||||||    
T  12559608 cacatataaacacataataaaaaaaattaaaataaatctagcgaaaaatcgggctgttaca 12559548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 14285808 - 14285857
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    ||||||| ||||||  ||||||||||||| ||||||||||||| ||||||||    
T  14285808 aatcacataataaa--taattaaaataaatctagctaaaaatcgggctgtta 14285857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 1 - 71
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  1 acaattaatcacatacaaacacataataaaagtaattaaaataaaactagctaaaaatcgggctgttacag 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 5e-25; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25951458 - 25951389
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25951458 cacaattaatcacatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcgggctgttaca 25951389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14625569 - 14625499
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  |||||||||    
T  14625569 cacaattaatcacatacaatcacacaataaaagtaattgaaataaatctagctaaaaatcgtgctgttaca 14625499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 16814439 - 16814371
Alignment:
Q  4 aattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  16814439 aattaattacatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcgggctgttacagt 16814371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25176370 - 25176440
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  25176370 cacaaataatcacacacaaacacataataaaagtaattaaaataaaactagctaaaaatcgggctgttaca 25176440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25898554 - 25898482
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  25898554 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaaactagctaaaaatcgggctgttacagtt 25898482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1649566 - 1649496
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  1649566 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 1649496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9477906 - 9477836
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| || | |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  9477906 cacaattaatcacaaaccaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 9477836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12415268 - 12415198
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  12415268 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 12415198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16232708 - 16232778
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  16232708 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 16232778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19610834 - 19610904
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  19610834 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 19610904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 22225167 - 22225113
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22225167 aatcacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 22225113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 22250995 - 22250941
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22250995 aatcacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 22250941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22256542 - 22256612
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  22256542 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 22256612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 1556829 - 1556893
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  1556829 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 1556893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 4991900 - 4991964
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  4991900 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 4991964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 32276103 - 32276040
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  32276103 aatcacacacaaacacaaaataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 32276040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10489520 - 10489589
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  10489520 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 10489589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15741638 - 15741568
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| | || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  15741638 cacaaataatcacacataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 15741568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23995747 - 23995817
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||| |||||    
T  23995747 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctcttaca 23995817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29869225 - 29869155
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  29869225 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaattgggctgttaca 29869155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 15863309 - 15863362
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  15863309 cacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttatagtt 15863362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 19300015 - 19300083
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  19300015 acaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 19300083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 1657176 - 1657112
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  1657176 taatcacacacaaacacataataaaagtaattaaaataaatctagcgaaaaatcgggctgttaca 1657112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 18001889 - 18001837
Alignment:
Q  19 atcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18001889 atcacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 18001837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 21774384 - 21774320
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||| |||| |||| ||||||||||||||||||||||||||||||||||| | ||||||||    
T  21774384 taattacagacaaacacataataaaagtaattaaaataaaactagctaaaaatcggactgttaca 21774320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 27653432 - 27653369
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| | ||||||||    
T  27653432 taatcacatacaatcaaacaataagagtaatt-aaataaaactagctaaaaatcggactgttaca 27653369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 19982673 - 19982622
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  19982673 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 19982622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 16086851 - 16086901
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  16086851 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 16086901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16375831 - 16375758
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagttt 75  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  16375831 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttacagttt 16375758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16555570 - 16555501
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||| ||| ||||||||||||| ||||||||||    
T  16555570 cacaattaatcacacacaaacaca-attaaaagtaattaaaacaaatctagctaaaaatcgggctgttaca 16555501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16632126 - 16632057
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||| ||| ||||||||||||| ||||||||||    
T  16632126 cacaattaatcacacacaaacaca-attaaaagtaattaaaacaaatctagctaaaaatcgggctgttaca 16632057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19630129 - 19630199
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||| ||| ||||||    
T  19630129 cacaaataatcacacacaaacacataataaaagtaattgaaataaatctagctaaaaatcgggcggttaca 19630199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 23148850 - 23148900
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23148850 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 23148900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 25633096 - 25633046
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  25633096 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 25633046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 31629075 - 31629125
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  31629075 cacacaataaaaataattaaaataaatctagctaaaaatcgggctgttaca 31629125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 35008835 - 35008785
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  35008835 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 35008785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 25743844 - 25743799
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  25743844 aataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 25743799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 9276756 - 9276800
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  9276756 taaaagtaattaaaataaatctagctaaaaatcgggctgttacag 9276800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 934083 - 934040
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  934083 taaaagtaattaaaataaatctagctaaaaatcgggctgttaca 934040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 22441826 - 22441873
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||||||    
T  22441826 aataaaagtaattaaaataaatctagctaaaaatcgggctattacagt 22441873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 23978600 - 23978643
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  23978600 taaaagtaattaaaataaatctagctaaaaatcgggctgttaca 23978643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16383155 - 16383086
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  16383155 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 16383086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 18086273 - 18086223
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  18086273 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 18086223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 25912703 - 25912745
Alignment:
Q  29 aaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  25912703 aaaagtaattaaaataaatctagctaaaaatcgggctgttaca 25912745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 13620192 - 13620147
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||    
T  13620192 aataaaagaaattaaaataaatctagctaaaaatcgggctgttaca 13620147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 35014547 - 35014487
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| |||||||||||| |||||||| ||||||||||||| | ||||||||    
T  35014547 cacatataaacacataataaaagtaatgaaaataaatctagctaaaaatcggactgttaca 35014487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 18399829 - 18399879
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||| ||||||| || |||||||    
T  18399829 cacataataaaagtaattaaaataaatctagcgaaaaatcgggatgttaca 18399879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 18571170 - 18571208
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  18571170 cacataataaaagtaattaaaataaatctagctaaaaat 18571208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 18822799 - 18822749
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||| | ||||||| ||||||||||    
T  18822799 cacataataaaagtaattaaaataaatctaccgaaaaatcgggctgttaca 18822749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 26090500 - 26090537
Alignment:
Q  34 taattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  26090500 taattaaaataaatctagctaaaaatcgggctgttaca 26090537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 5e-25; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22365922 - 22365849
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagttt 75  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  22365922 cacaattaatcacatacaatcacacagtaaaagtaatt-aaataaaactagctaaaaatcgggctgttacagttt 22365849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21073034 - 21072965
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  21073034 cacaattaatcacatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcggactgttaca 21072965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29187728 - 29187659
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  29187728 cacaattaatcgcatacaatcacacaataaaagtaatt-aaataaaactagctaaaaatcgggctgttaca 29187659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23543112 - 23543182
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23543112 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 23543182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 4199426 - 4199357
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  4199426 acaattaatcacacacaaacacacaataaaggtaattaaaataaatctagctaaaaatcgggctgttaca 4199357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 43442843 - 43442780
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  43442843 aatcacaaataatcacataataaaagtaattaaaataaaactagctaaaaatcgggctgttaca 43442780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1218970 - 1218900
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  1218970 cacaaataatcacacacaaacacataataaaagtaattaaaataaacctagctaaaaatcgggctgttaca 1218900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7426142 - 7426212
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| ||| |||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7426142 cacaaataaccacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 7426212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16537001 - 16537071
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  16537001 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 16537071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 19500696 - 19500760
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||||||||||| | ||||||||    
T  19500696 taatcacagacaaacacataataaaagtaattaaaataaaactagctaaaaatcggactgttaca 19500760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 16106490 - 16106541
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  16106490 cacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 16106541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17471026 - 17470956
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| ||||| |||| |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  17471026 cacaattagtcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 17470956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21232987 - 21232917
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  21232987 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcggactgttaca 21232917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34940102 - 34940172
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| || ||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  34940102 cacaaatagtcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 34940172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 11584925 - 11584977
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  11584925 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacagt 11584977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 13180 - 13242
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||| | ||||||| |||||||||||||||| |||||||||||||||||| ||||||||||    
T  13180 aatcacaaataatcacataataaaagtaattaaa-taaaactagctaaaaatcgggctgttaca 13242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22882525 - 22882455
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| |||| ||||||    
T  22882525 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctattacag 22882455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 36989205 - 36989135
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  |||||||||||    
T  36989205 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttacag 36989135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 11211493 - 11211443
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  11211493 cacacaataaaagtatttaaaataattctagctaaaaatcaggctgttaca 11211443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20623772 - 20623842
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||| ||||||||||||| |||||||||||||  |||||||||    
T  20623772 cacaaataatcacacacaaacacataataaaaataattaaaataaacctagctaaaaatcgagctgttaca 20623842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 20712960 - 20713010
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  20712960 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 20713010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23329363 - 23329432
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | | ||||||||||||||||| ||||||||||||| ||||||||||    
T  23329363 cacaattaatcacacacaaacaca-atttaaagtaattaaaataaatctagctaaaaatcgggctgttaca 23329432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25899867 - 25899797
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||| ||||||||||||| |||||||||| || ||||||||||    
T  25899867 cacaaataatcacacacaaacacataataaaaataattaaaataaatctagctaaaagtcgggctgttaca 25899797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35582857 - 35582926
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  35582857 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 35582926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 23980899 - 23980838
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||| || ||||||||||||||||||||||||||  |||| ||||||| |||||||||||    
T  23980899 cacatataaacacacaataaaagtaattaaaataaatatagcgaaaaatcgggctgttacag 23980838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 27181950 - 27181905
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  27181950 aataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 27181905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 11343527 - 11343583
Alignment:
Q  16 acaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  11343527 acaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctattacag 11343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 18777423 - 18777359
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| || |||| |||| ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  18777423 taatctcacacaaacacataataaaagtaattgaaataaatctagctaaaaatcgggctgttaca 18777359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 32951544 - 32951595
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| ||||||||||||| | |||||||||    
T  32951544 cacataataaaagtaattaaaataaatctagctaaaaatcggtctgttacag 32951595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37053548 - 37053619
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| || | ||| ||| ||||||||||||| ||||||||||||| |||||||||||    
T  37053548 cacaaataatcacacacaaacagataattaaaataattaaaataaacctagctaaaaatcgggctgttacag 37053619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 4866118 - 4866168
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  4866118 cacataataaaagtaattaaaataaatctaactaaaaatcgggctgttaca 4866168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9729795 - 9729725
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| | || |||| ||||||||||||||||||||| ||||||||||| | || |||||||    
T  9729795 cacaaataatcacacataaacacataataaaagtaattaaaataaatctagctaaaaaccgggttgttaca 9729725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 10777378 - 10777328
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  10777378 cacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 10777328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 21205791 - 21205841
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  21205791 cacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 21205841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 21651565 - 21651615
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||||||||||||||||||||  |||||||||||| ||||||||||    
T  21651565 cacataataaaagtaattaaaataaatatagctaaaaatcgggctgttaca 21651615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21931837 - 21931768
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  21931837 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 21931768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21938007 - 21937938
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  21938007 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 21937938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 24617104 - 24617173
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagct-aaaaatcaggctgttaca 71  Q
    ||||||||||||| |||| |||| | ||||||||||||||||||| |||||| ||||||| ||||||||||    
T  24617104 acaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaaatcgggctgttaca 24617173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 24746363 - 24746432
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagct-aaaaatcaggctgttaca 71  Q
    ||||||||||||| |||| |||| | ||||||||||||||||||| |||||| ||||||| ||||||||||    
T  24746363 acaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaaatcgggctgttaca 24746432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 25427431 - 25427481
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  25427431 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 25427481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 23515419 - 23515464
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||    
T  23515419 aataaaagtaattaaaataaatgtagctaaaaatcgggctgttaca 23515464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 19406417 - 19406477
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||||||||||| |||  |||| ||||||| ||||||||||    
T  19406417 cacatataaacacacaataaaagtaattaaaacaaatatagcgaaaaatcgggctgttaca 19406477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 21646134 - 21646095
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatc 60  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  21646134 cacataataaaagtaattaaaataaatctagctaaaaatc 21646095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 35790540 - 35790493
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtt 68  Q
    |||| ||||||| ||||||||||||| ||||||||||||| |||||||    
T  35790540 cacataataaaaataattaaaataaatctagctaaaaatcgggctgtt 35790493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 108267 - 108206
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||| |||| |||| ||||||| ||| ||||||||| ||||||||||||| ||||||||||||    
T  108267 cacacacaaacacataataaaa-taaataaaataaatctagctaaaaatcgggctgttacagt 108206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 24475863 - 24475905
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcagg 63  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||    
T  24475863 cacataataaaagtaatttaaataaatctagctaaaaatcagg 24475905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 27010654 - 27010704
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||||||  |||||||||||| ||||||||||||| ||||||||||    
T  27010654 cacataataaaaacaattaaaataaatctagctaaaaatcgggctgttaca 27010704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 27134987 - 27134937
Alignment:
Q  164 ttttggttcaaatatccattttaaacctatcaatcaatcaacacactctat 214  Q
    ||||||||||||||||||||| | | ||| ||||||||||||| |||||||    
T  27134987 ttttggttcaaatatccatttaacagctagcaatcaatcaacatactctat 27134937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 28262327 - 28262387
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| |||||| |||||||||||||| ||| ||||||||| || |||||||    
T  28262327 cacatataaacacataataaaggtaattaaaataaatctaactaaaaatcgggttgttaca 28262387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 5738 - 5673
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5738 aatcacaaataatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 5673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 22906664 - 22906595
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  22906664 acaattaatcacacacaatcacataataaaagtaattaaaataaaactagctaaaaatcgggctgttaca 22906595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28837085 - 28837157
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28837085 cacaattaatcacacacaaacacataataaaagtaattaaaataaaactagctaaaaatcgggctgttacagt 28837157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 30121531 - 30121600
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  30121531 acaattaatcacacacaatcacataataaaagtaattaaaataaaactagctaaaaatcgggccgttaca 30121600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17142468 - 17142397
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||    
T  17142468 cacaatcaatcacacacaatcacacaataaaagtaattgaaataaaattagctaaaaatcgggctgttacag 17142397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 25123300 - 25123364
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  25123300 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 25123364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16673839 - 16673768
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  16673839 cacaaataatcacacacaaacacataataaaagtaattaaaataaacctagctaaaaatcgggctgttacag 16673768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13720363 - 13720293
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13720363 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 13720293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 41247521 - 41247583
Alignment:
Q  9 atcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  41247521 atcacatataaacacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 41247583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 41248072 - 41248010
Alignment:
Q  9 atcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  41248072 atcacatataaacacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 41248010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 13661719 - 13661650
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||| ||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13661719 acaattaataacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 13661650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2545773 - 2545841
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| | ||||||    
T  2545773 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcggactgtta 2545841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 16196044 - 16196108
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  16196044 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 16196108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 24928230 - 24928166
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  24928230 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 24928166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 17353348 - 17353419
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| |||||||||||||||||||||  |||||||||||| |||||||||||    
T  17353348 cacaaataatcacacacaaacacataataaaagtaattaaaataaatttagctaaaaatcgggctgttacag 17353419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 22005687 - 22005620
Alignment:
Q  4 aattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||| |||| |||| ||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  22005687 aattaatcacacacaaacacataataaaagtaattaaaataaatctagcaaaaaatcgggctgttaca 22005620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43686348 - 43686419
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  43686348 cacaaataatcacacacaaacacataataaaaataattaaaataaacctagctaaaaatcgggctgttacag 43686419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17431612 - 17431543
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  17431612 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 17431543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23512043 - 23512113
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| | || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23512043 cacaaataatcacacataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 23512113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 24549790 - 24549859
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| |||| ||||||||||| ||||||||| |||| ||||| ||||||| ||||||||||    
T  24549790 acaattaatcacacacaaacacacaataaaggtaattaaagtaaatctagccaaaaatcgggctgttaca 24549859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 22221722 - 22221662
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22221722 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcagactgttaca 22221662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 22228064 - 22228004
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22228064 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcagactgttaca 22228004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15318594 - 15318524
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| |||| ||||||    
T  15318594 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctattacag 15318524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15498963 - 15498893
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| |||| ||||||    
T  15498963 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctattacag 15498893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 984119 - 984050
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  984119 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 984050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 29760826 - 29760876
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  29760826 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 29760876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 43372879 - 43372829
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  43372879 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 43372829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24660707 - 24660650
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| |||||||||||    
T  24660707 cacaaataatcacacacaaacacataataaaagtaattaaaataaacctagctaaaaa 24660650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 16878168 - 16878105
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  16878168 taatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttaca 16878105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 275293 - 275360
Alignment:
Q  5 attaatcacatacaat-cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||| ||  |||| ||||||||||||||||||||| ||||||||||||| |||| |||||    
T  275293 attaatcacatataaaacacataataaaagtaattaaaataaatctagctaaaaatcgggcttttaca 275360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 640556 - 640489
Alignment:
Q  5 attaatcacatacaat-cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||| ||  |||| ||||||||||||||||||||| ||||||||||||| |||| |||||    
T  640556 attaatcacatataaaacacataataaaagtaattaaaataaatctagctaaaaatcgggcttttaca 640489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 826362 - 826295
Alignment:
Q  5 attaatcacatacaat-cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||| ||  |||| ||||||||||||||||||||| ||||||||||||| |||| |||||    
T  826362 attaatcacatataaaacacataataaaagtaattaaaataaatctagctaaaaatcgggcttttaca 826295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 16404393 - 16404342
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| ||||||||||||| || ||||||||    
T  16404393 cacataataaaagtaattaaaataaatctagctaaaaatcgggttgttacag 16404342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 20653392 - 20653342
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  20653392 cacataataaaagtaattaaaataaatctagcgaaaaatcgggctgttaca 20653342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24105647 - 24105578
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||| | ||||||| ||||||||||    
T  24105647 cacaaataatcacacacaa-cacataataaaagtaattaaaataaatctaccgaaaaatcgggctgttaca 24105578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 20529215 - 20529170
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  20529215 aataaaagtaattaaaataaatctagcgaaaaatcgggctgttaca 20529170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 3430693 - 3430630
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| | ||||||||||||||||||| |||||||||||||  |||||||||    
T  3430693 taatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgagctgttaca 3430630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 5238903 - 5238963
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||| |||| ||| ||| ||||||||||||| ||||||||||||| ||||||||||    
T  5238903 cacacacaaacacataattaaaataattaaaataaacctagctaaaaatcgggctgttaca 5238963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22088229 - 22088158
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||||||||| ||||  ||| | |||||||||||||| |||| ||||||||||||| || |||||||||    
T  22088229 cacaattaatcacacacaaagaca-attaaaagtaattaaattaaatctagctaaaaatcgggttgttacagt 22088158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 270796 - 270739
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    |||||||||||||| |||| |||| | |||||||||||||||| || ||||||||||||    
T  270796 cacaattaatcacacacaaacaca-attaaaagtaattaaaatgaatctagctaaaaat 270739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 645124 - 645181
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    |||||||||||||| |||| |||| | |||||||||||||||| || ||||||||||||    
T  645124 cacaattaatcacacacaaacaca-attaaaagtaattaaaatgaatctagctaaaaat 645181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 830859 - 830916
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    |||||||||||||| |||| |||| | |||||||||||||||| || ||||||||||||    
T  830859 cacaattaatcacacacaaacaca-attaaaagtaattaaaatgaatctagctaaaaat 830916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 21844018 - 21843968
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    ||||||| | ||||||| ||||||||||||||||||||||||  |||||||    
T  21844018 aatcacaaataatcacataataaaagtaattaaaataaaactgactaaaaa 21843968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 21851411 - 21851361
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    ||||||| | ||||||| ||||||||||||||||||||||||  |||||||    
T  21851411 aatcacaaataatcacataataaaagtaattaaaataaaactgactaaaaa 21851361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 24716241 - 24716191
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||| |||  |||||||||||| ||||||||||    
T  24716241 cacataataaaagtaattaaaagaaatttagctaaaaatcgggctgttaca 24716191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 19992445 - 19992408
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  19992445 cacataataaaagtaattaaaataaatctagctaaaaa 19992408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33532895 - 33532967
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    ||||| |||||||| |||| |||| | ||||||||||||||||||| ||| ||||||||| || ||||| ||||    
T  33532895 cacaaataatcacacacaaacaca-attaaaagtaattaaaataaacctaactaaaaatcgggttgttatagtt 33532967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 37612552 - 37612601
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttac 70  Q
    |||| ||||||| ||||||||||||| ||| ||||||||| |||||||||    
T  37612552 cacataataaaaataattaaaataaatctaactaaaaatcgggctgttac 37612601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 39116158 - 39116202
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||| ||||||||||  |||||||||||| |||||||||||    
T  39116158 taaaagtagttaaaataaatatagctaaaaatcgggctgttacag 39116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 46419 - 46478
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatc 60  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46419 cacaattaatcacacacaatcacacaataaaagtaattaaaataaaactagctaaaaatc 46478  T

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Target: scaffold0076; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39924 - 39993
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  39924 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 39993  T

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Target: scaffold0420 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 7618 - 7551
Alignment:
Q  4 aattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  7618 aattaatcacatacaatcacacaataaaagtaatt-aaatgaaactagctaaaaatcgggctgttacag 7551  T

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Target: scaffold0028 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 131396 - 131467
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  131396 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 131467  T

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Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 107203 - 107144
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttac 70  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| || ||||||    
T  107203 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttac 107144  T

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Target: scaffold0771 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6426 - 6356
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6426 cacaaataatcacacacaaccacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 6356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1043 - 973
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1043 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 973  T

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Target: scaffold0121 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20584 - 20514
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  20584 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 20514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 31114 - 31045
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  31114 acaattaatcacacacaaacacacaataaaggtaattaaaataaatctagctaaaaatcgggctgttaca 31045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 23553 - 23617
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||  ||||||| ||||||||||    
T  23553 taatcacacacaaacacataataaaagtaattaaaataaatctagtgaaaaatcgggctgttaca 23617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1714 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1714
Description:

Target: scaffold1714; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 185 - 257
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| |||| |||||||||||||||||||||    
T  185 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagttaaaaatcaggctgttacagt 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 321 - 393
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  321 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacagt 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8813 - 8884
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  8813 cacaaataatcacacacaagcacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 8884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23189 - 23118
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  23189 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 23118  T

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Target: scaffold0092 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10187 - 10116
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  10187 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 10116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4650 - 4579
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  4650 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 4579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 111904 - 111854
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  111904 cacataataaaagtaattaaaataaatctatctaaaaatcgggctgttaca 111854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5638 - 5568
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  5638 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 5568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14688 - 14618
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||||| | ||||||||    
T  14688 cacaaataatcacacacaaacacataataaaagtaattaaaataaaactagctaaaaatcggactgttaca 14618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17848 - 17918
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  17848 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 17918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 399 - 330
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||||||| |||| |||| ||||||||||||||||||||| |||||||||||||  |||||||||    
T  399 acaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgtgctgttaca 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 5572 - 5632
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  5572 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 5632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20562 - 20492
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  20562 cacaattaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 20492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13497 - 13433
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggct 65  Q
    |||||||||||||| |||| |||| |||||||||||||||| |||| ||||||||||||| ||||    
T  13497 cacaattaatcacacacaaacacataataaaagtaattaaattaaatctagctaaaaatcgggct 13433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38426 - 38496
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  38426 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 38496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 65800 - 65730
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  65800 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 65730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 39176 - 39242
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagttt 75  Q
    ||||||||| || |||| ||||| ||||||||||||||| |||| |||||||| ||||||||||||||    
T  39176 aatcacatataa-cacataataatagtaattaaaataaatctagataaaaatcgggctgttacagttt 39242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 137370 - 137300
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  137370 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 137300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1979 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1979
Description:

Target: scaffold1979; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 103 - 168
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  103 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 6874 - 6817
Alignment:
Q  16 acaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  6874 acaattacacaataaaaataattaaaataaaactagctaaaaatcgggctgttacagt 6817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 89696 - 89761
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  89696 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatctggctgttacag 89761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 131611 - 131561
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  131611 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 131561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 167751 - 167682
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  167751 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 167682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 385 - 321
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  385 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2810 - 2878
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  2810 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgtta 2878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 14869 - 14819
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  14869 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 14819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 36327 - 36277
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  36327 cacataataaaagtaattaaaataaatctagctaaaaattgggctgttaca 36277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 33889 - 33825
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  33889 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 33825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 82 - 152
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| ||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| || |||||||    
T  82 cacaaataatcacatacaaacacataataaaaataattaaaataaatctagctaaaaatcgggttgttaca 152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 17295 - 17245
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17295 cacataataaaagtaattaaaataaatctagctaaaaatcaggctgttaca 17245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 2191 - 2241
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  2191 cacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 2241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 23080 - 23130
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23080 cacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 23130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7413 - 7483
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| | || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  7413 cacaaataatcacacaaaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 7483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 5051 - 5001
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  5051 cacataataaaagtaattaaaataaatctagctaaaaatcgggcagttaca 5001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 36167 - 36102
Alignment:
Q  8 aatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    ||||||| | ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  36167 aatcacaaataatcacataataaaagtaattaaa-taaaactagctaaaaatcgggctgttacagtt 36102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 36473 - 36423
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  36473 cacacaataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 36423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 42177 - 42237
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  42177 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 42237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 36902 - 36972
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||| |||| | || ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  36902 cacaattaatcacacacaaacgcataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 36972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 169341 - 169288
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||  |||||||||||||||||||||||||| | ||||||||    
T  169341 aatcacacaataaaatcaattaaaataaaactagctaaaaatcggactgttaca 169288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 256 - 202
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagcta-aaaatcaggctgttacagtt 74  Q
    |||| ||||||| ||||||||||||| ||||||| |||||| |||||||||||||    
T  256 cacataataaaaataattaaaataaatctagctaaaaaatcgggctgttacagtt 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 3050 - 3119
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||||||| |||| |||| ||||||||| ||||||||||||||||||||||||| || |||||||    
T  3050 acaaataatcacacacaaacacataataaaagtgattaaaataaaactagctaaaaatcgggttgttaca 3119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0537 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 782 - 834
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  782 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacagt 834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 9442 - 9378
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  9442 taatcacacacaaacacataataaaagtaattaaaataaatctagctataaatcgggctgttaca 9378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 353 - 417
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||| |||||    
T  353 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggcttttaca 417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 3217 - 3281
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||| |||||    
T  3217 taatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggcttttaca 3281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 9179 - 9243
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||| || |||| ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  9179 taatcacatataaacacataataaaagtaattaaaataaatctaactaaaaatcgggctgttaca 9243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 10718 - 10781
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||| || |||| ||||||||||||| ||||||| ||||||||||||| || |||||||    
T  10718 taatcacatataaacacataataaaagtaatt-aaataaatctagctaaaaatcgggttgttaca 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29227 - 29156
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  29227 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttacagt 29156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8792 - 8724
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    ||||| |||||||| |||  |||| ||||||||||||||||||||||||||||||||||| | ||||||    
T  8792 cacaaataatcacacacagacacataataaaagtaattaaaataaaactagctaaaaatcggactgtta 8724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 30667 - 30607
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  30667 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 30607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27599 - 27671
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||| |||||||| |||| |||| ||| ||| ||||||||||||| ||||||||||||| ||||||||||||    
T  27599 cacaaataatcacacacaaacacataattaaaataattaaaataaacctagctaaaaatcgggctgttacagt 27671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23344 - 23414
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||| ||| ||||||||||| | ||||||||||||| ||||||||||    
T  23344 cacaaataatcacacacaaacacataattaaaataattaaaatatacctagctaaaaatcgggctgttaca 23414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 87213 - 87141
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||| |||||||| |||| |||| ||| ||| ||||||||||||| ||||||||||||| ||||||||||||    
T  87213 cacaaataatcacacacaaacacataattaaattaattaaaataaacctagctaaaaatcgggctgttacagt 87141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 21045 - 21095
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| |||||||||||||  |||||||||    
T  21045 cacataataaaagtaattaaaataaatctagctaaaaatcgagctgttaca 21095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 50618 - 50554
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| | |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  50618 taatcatacacaaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 50554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 165088 - 165148
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  165088 cacatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 165148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 165643 - 165595
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  165643 cacataataaaagtaattaaaataaatctagctaaaaatctggctgtta 165595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 246851 - 246799
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  246851 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacagt 246799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 5942 - 5895
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  5942 aataaaagtaattaaaataaatctagctaaaaatcgggctgttacagt 5895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10284 - 10214
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  |||||||||||    
T  10284 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttacag 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11582 - 11511
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||| |||||||| |||| |||| ||| ||| ||||||||||||| ||||||||||||| |||||||||||    
T  11582 cacaaataatcacacacaaacacataattaaaataattaaaataaacctagctaaaaatcgggctgttacag 11511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16745 - 16677
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||  ||| |||| |||||| |||||||||||||| ||||||||||||| ||||||||||    
T  16745 cacaattaatcaca--caaacacataataaatgtaattaaaataaatctagctaaaaatcgggctgttaca 16677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32130 - 32200
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| | |||||||||    
T  32130 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcggactgttacag 32200  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 41539 - 41598
Alignment:
Q  12 acatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  41539 acatataaacacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 41598  T

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Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 80737 - 80780
Alignment:
Q  29 aaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||    
T  80737 aaaattaattaaaataaatctagctaaaaatcaggctattacag 80780  T

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Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 3 - 54
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  3 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttacag 54  T

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Target: scaffold1542 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 119 - 184
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgt 67  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||    
T  119 cacaattaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgt 184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 932 - 882
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  932 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4226 - 4296
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||| || |||||||    
T  4226 cacaaataatcacacacaaacacataataaaagtaattgaaataaatctagctaaaaatcgggatgttaca 4296  T

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Target: scaffold0686 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 5256 - 5206
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  5256 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 5206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8529 - 8459
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||| ||||||  ||||||||||    
T  8529 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagccaaaaatggggctgttaca 8459  T

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Target: scaffold0413 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 5521 - 5471
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  5521 cacacaataaaagtaattaaattaaatctagctaaaaatcgggctgttaca 5471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 4991 - 4937
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||| ||||||||||||||||||||| ||||||||||||  |||||||||||    
T  4991 aatcacataataaaagtaattaaaataaatctagctaaaaattgggctgttacag 4937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 6872 - 6925
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||| ||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  6872 cacataataaaagtaattaaaataaatctagctaaaaatcggactgttacagtt 6925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 12969 - 13019
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  12969 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 12293 - 12228
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    |||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  12293 taatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgttacagt 12228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 63250 - 63200
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  63250 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 63200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 11921 - 11867
Alignment:
Q  5 attaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    |||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||    
T  11921 attaatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaat 11867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 107576 - 107526
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  107576 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 107526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6341 - 6269
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||| |||||||| |||| |||| |||||||||||||||||||||  ||| |||||||  ||||||||||||    
T  6341 cacaaataatcacacacaaacacataataaaagtaattaaaataaatatagttaaaaattgggctgttacagt 6269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12790 - 12718
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||| |||||||| |||| |||| |||||||||||||||||||||  ||| |||||||  ||||||||||||    
T  12790 cacaaataatcacacacaaacacataataaaagtaattaaaataaatatagttaaaaattgggctgttacagt 12718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 63984 - 63926
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| ||||||||||||    
T  63984 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaat 63926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44379 - 44449
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||| |||| |||||    
T  44379 cacaaataatcacacacaaacacataataaaagtaattgaaataaatctagctaaaaatcgggctattaca 44449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 54682 - 54752
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||||||||| |||| |||||    
T  54682 cacaaataatcacacacaaacacataataaaagtaattgaaataaatctagctaaaaatcgggctattaca 54752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 254240 - 254190
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  254240 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 254190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 260846 - 260796
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  260846 cacataataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 260796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 122563 - 122520
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  122563 taaaagtaattaaaataaatctagctaaaaatcgggctgttaca 122520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 187748 - 187795
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    |||||| || |||| ||||||||||||||||||||| |||||||||||    
T  187748 cacatataaacacataataaaagtaattaaaataaatctagctaaaaa 187795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0850 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0850
Description:

Target: scaffold0850; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 4980 - 4935
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  4980 taaaagtaattaaaataaatctagctaaaaatcgggctgttacagt 4935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 6206 - 6157
Alignment:
Q  22 acacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  6206 acacaataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 6157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 189 - 145
Alignment:
Q  27 ataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||| ||||||||| ||||||||||||| || |||||||    
T  189 ataaaagtaaataaaataaatctagctaaaaatcgggttgttaca 145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9510 - 9453
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    ||||| |||||||| |||| |||| ||||||||||||||||||||| |||||||||||    
T  9510 cacaaataatcacacacaaacacataataaaagtaattaaaataaatctagctaaaaa 9453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 1978 - 2023
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  1978 aataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 2023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 43230 - 43275
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  43230 aataaaagtaattaaaataaatctagctaaaaatcgggctgttaca 43275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 14343 - 14393
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  14343 cacataataaaagtaattaaaataaatctaactaaaaatcgggctgttaca 14393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 5159 - 5219
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| |||||||||||||||||||||  |||||||||||| ||||||||||    
T  5159 cacatataaacacataataaaagtaattaaaataaatatagctaaaaatcgggctgttaca 5219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 294 - 230
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| | || |||| ||||||||||||||||||||| ||||||||||| | ||||||||||    
T  294 taatcacacataaacacataataaaagtaattaaaataaatctagctaaaaaacgggctgttaca 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 9865 - 9925
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||| ||||||||||||| ||||||||||||| |||| |||||    
T  9865 cacatataaacacacaataaaattaattaaaataaatctagctaaaaatcgggctattaca 9925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 10938 - 10890
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaat 59  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||||    
T  10938 cacatataaacacacaataaaagtaattaaaataaatctagctaaaaat 10890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 30961 - 31021
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| ||||||||||||||||||||| |||| |||||||| ||||||||||    
T  30961 cacatataaacacataataaaagtaattaaaataaatctagttaaaaatcgggctgttaca 31021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 45081 - 45017
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||| | || |||| ||||||||||||||||||||| ||||||||||| | ||||||||||    
T  45081 taatcacacataaacacataataaaagtaattaaaataaatctagctaaaaaacgggctgttaca 45017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 9742 - 9785
Alignment:
Q  30 aaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  9742 aaagtaattaaaataaatctagctaaaaatcgggctgttacagt 9785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 418 - 468
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||| || |||||||    
T  418 cacataataaaagtaattaaaataaatctagctaaaaatcgggttgttaca 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0782 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0782
Description:

Target: scaffold0782; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 369 - 439
Alignment:
Q  2 acaattaatcacatacaatcacacaataaaagtaattaaaataaaactagct-aaaaatcaggctgttaca 71  Q
    |||||||||||||  ||| ||||||||||| |||| ||||||||| |||||| ||||||| ||||||||||    
T  369 acaattaatcacacgcaaacacacaataaaggtaactaaaataaatctagctaaaaaatcgggctgttaca 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 4482 - 4432
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  4482 cacataataaaaataattaaaataaatctagctaaaaatcgggctgttaca 4432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 266 - 335
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  266 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 5781 - 5731
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  5781 cacataataaaagtaattaaaataaatctagctaaaaattgggctgttaca 5731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 6173 - 6234
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||||||| |||| |||| | ||||||||||||||||||| ||||||||||||| ||||||||    
T  6173 taatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaatcgggctgtta 6234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23045 - 22976
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  23045 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 22976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 4564 - 4514
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  4564 cacataataaaagtaattaaaataaatctagctaaaaattgggctgttaca 4514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21 - 90
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||| |||| |||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  21 cacatttaatcacacacaaacaca-attaaaagtaattaaaataaatctagctaaaaattgggctgttaca 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 10829 - 10875
Alignment:
Q  26 aataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||    
T  10829 aataaaagtaattaaaataaatctagctaaaaatcgggttgttacag 10875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 7598 - 7548
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  7598 cacataataaaattaattaaaataaatctagctaaaaatcgggctgttaca 7548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 12595 - 12645
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  12595 cacataataaaagtaattaaaataaatctagctaaaaattgggctgttaca 12645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 25823 - 25773
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  25823 cacataataaaagtaattaaaataaatctagctaaaaatagggctgttaca 25773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 48910 - 48860
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| |||||||| |||| ||||||||||    
T  48910 cacataataaaagtaattaaaataaatctagctaagaatcgggctgttaca 48860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 15710 - 15772
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagct-aaaaatcaggctgttacag 72  Q
    |||||| || |||| ||||||||||||||||||||| |||||| ||||||| |||||||||||    
T  15710 cacatataaacacataataaaagtaattaaaataaatctagctaaaaaatcgggctgttacag 15772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 24077 - 24035
Alignment:
Q  29 aaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  24077 aaaagtaattaaaataaatctagctaaaaatcgggctgttaca 24035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 97701 - 97751
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  97701 cacataataaaagtaattaaattaaatctagctaaaaatcgggctgttaca 97751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 79249 - 79199
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||| |||||    
T  79249 cacataataaaagtaattgaaataaatctagctaaaaatcaggctcttaca 79199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 9873 - 9828
Alignment:
Q  28 taaaagtaattaaaataaaactagctaaaaatcaggctgttacagt 73  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  9873 taaaagtaattaaaataaatctagctaaaaattgggctgttacagt 9828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 4020 - 4072
Alignment:
Q  18 aatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||| |||||||||||||||||| || ||||||||||||| ||||||||||    
T  4020 aatcacataataaaagtaattaaaat-aatctagctaaaaatcgggctgttaca 4072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30007 - 30064
Alignment:
Q  1 cacaattaatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    |||||||||||||| |  | |||| ||||||||||||||||||||| |||||||||||    
T  30007 cacaattaatcacacaacaacacataataaaagtaattaaaataaatctagctaaaaa 30064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 49009 - 49062
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||| |||| |||||||||||||||| ||||| ||||||| |||||||||||||    
T  49009 cacataatataagtaattaaaataaatctagcaaaaaatcgggctgttacagtt 49062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 62457 - 62510
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacagtt 74  Q
    |||| |||| |||||||||||||||| ||||| ||||||| |||||||||||||    
T  62457 cacataatataagtaattaaaataaatctagcaaaaaatcgggctgttacagtt 62510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 86220 - 86269
Alignment:
Q  22 acacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    ||||||||||||||||| ||||||| | ||| ||||||||||||||||||    
T  86220 acacaataaaagtaattgaaataaatcaagcaaaaaatcaggctgttaca 86269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 2427 - 2383
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggct 65  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||    
T  2427 cacataataaaagtaattaaaataaatctagctaaaaatcgggct 2383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 4628 - 4568
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||| |||||||||||||||| |||| ||||||||||||| |||| |||||    
T  4628 cacatataaacacataataaaagtaattaaagtaaatctagctaaaaatcgggcttttaca 4568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 8264 - 8216
Alignment:
Q  24 acaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    ||||||||||||||||||||||| ||||| ||||||| || ||||||||    
T  8264 acaataaaagtaattaaaataaatctagcgaaaaatcgggttgttacag 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 27386 - 27342
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggct 65  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||    
T  27386 cacataataaaagtaattaaaataaatctagctaaaaatcgggct 27342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 108834 - 108774
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||||||||||||| | ||||| ||||||  ||||||||||    
T  108834 cacatataaacacacaataaaagtaattaaaatatatctagcgaaaaattgggctgttaca 108774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 117335 - 117275
Alignment:
Q  11 cacatacaatcacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||||| || |||||||||||||||||||||||| | ||||| ||||||  ||||||||||    
T  117335 cacatataaacacacaataaaagtaattaaaatatatctagcgaaaaattgggctgttaca 117275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 773 - 722
Alignment:
Q  7 taatcacatacaatcacacaataaaagtaattaaaataaaactagctaaaaa 58  Q
    |||||||| |||| |||| ||||||| ||||||||||||| |||||||||||    
T  773 taatcacacacaaacacataataaaattaattaaaataaacctagctaaaaa 722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 3910 - 3859
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagcta-aaaatcaggctgttaca 71  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  3910 cacataataaaagtaattaaaataaatctagctaaaaaatcaggctcttaca 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 872 - 911
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatc 60  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  872 cacataataaaagtaattaaaataaatctagctaaaaatc 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 19329 - 19278
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttacag 72  Q
    |||| ||||||||||||||||||||| ||| ||||||||| || ||||||||    
T  19329 cacataataaaagtaattaaaataaatctacctaaaaatcgggttgttacag 19278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 648 - 698
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| || |||||||    
T  648 cacataataaaaataattaaaataaatctagctaaaaatcgggttgttaca 698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 15398 - 15348
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| |||||||||||||||| |||| ||| ||||||||| ||||||||||    
T  15398 cacataataaaagtaattaaattaaatctaactaaaaatcgggctgttaca 15348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 8380 - 8430
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| || |||||||    
T  8380 cacataataaaaataattaaaataaatctagctaaaaatcgggttgttaca 8430  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 149458 - 149500
Alignment:
Q  27 ataaaagtaattaaaataaaactagctaaaaatcaggctgtta 69  Q
    |||||||||||||||||||| ||||||||||||| | ||||||    
T  149458 ataaaagtaattaaaataaatctagctaaaaatcggactgtta 149500  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 153871 - 153821
Alignment:
Q  21 cacacaataaaagtaattaaaataaaactagctaaaaatcaggctgttaca 71  Q
    |||| ||||||| ||||||||||||| ||||||||||||| || |||||||    
T  153871 cacataataaaaataattaaaataaatctagctaaaaatcgggatgttaca 153821  T

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Target: scaffold0158 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 26084 - 26132
Alignment:
Q  26 aataaaagtaattaaaataaaactagct--aaaaatcaggctgttacag 72  Q
    ||||||||||||||||||||| ||||||  ||||||| |||||||||||    
T  26084 aataaaagtaattaaaataaatctagctaaaaaaatcgggctgttacag 26132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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