View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0660_low_8 (Length: 267)

Name: NF0660_low_8
Description: NF0660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0660_low_8
NF0660_low_8
[»] chr6 (21 HSPs)
chr6 (1-233)||(27851111-27851343)
chr6 (2-233)||(25956569-25956799)
chr6 (1-147)||(20734158-20734304)
chr6 (1-128)||(22420981-22421108)
chr6 (119-233)||(19399814-19399928)
chr6 (1-128)||(2201133-2201260)
chr6 (1-93)||(34296980-34297072)
chr6 (148-233)||(20734158-20734243)
chr6 (148-233)||(22421023-22421108)
chr6 (148-233)||(2201175-2201260)
chr6 (148-233)||(34296980-34297065)
chr6 (5-78)||(19399822-19399895)
chr6 (1-144)||(25956715-25956857)
chr6 (149-233)||(31630622-31630705)
chr6 (158-233)||(18927880-18927954)
chr6 (2-62)||(31630622-31630681)
chr6 (11-78)||(18927888-18927954)
chr6 (191-233)||(18708704-18708746)
chr6 (191-233)||(23151072-23151114)
chr6 (191-233)||(27322224-27322266)
chr6 (121-162)||(16624506-16624547)
[»] chr1 (23 HSPs)
chr1 (2-233)||(28194397-28194627)
chr1 (2-233)||(43697316-43697546)
chr1 (1-147)||(51274299-51274445)
chr1 (56-162)||(49261342-49261448)
chr1 (1-82)||(8885457-8885538)
chr1 (1-105)||(12328566-12328670)
chr1 (58-162)||(20636851-20636955)
chr1 (148-233)||(8885453-8885538)
chr1 (148-233)||(12328566-12328651)
chr1 (148-225)||(51274299-51274376)
chr1 (56-162)||(35981700-35981806)
chr1 (158-225)||(51326907-51326974)
chr1 (11-81)||(51326904-51326974)
chr1 (146-217)||(43543069-43543139)
chr1 (1-70)||(28194543-28194611)
chr1 (1-70)||(43543069-43543137)
chr1 (149-233)||(46382652-46382733)
chr1 (1-70)||(43697332-43697400)
chr1 (2-70)||(46382652-46382717)
chr1 (179-222)||(48301078-48301121)
chr1 (121-162)||(39244030-39244071)
chr1 (121-162)||(39247585-39247626)
chr1 (121-162)||(41388135-41388176)
[»] chr4 (26 HSPs)
chr4 (11-233)||(46642777-46642997)
chr4 (2-230)||(13844485-13844712)
chr4 (1-147)||(33186097-33186243)
chr4 (1-122)||(15880717-15880838)
chr4 (148-233)||(33186158-33186243)
chr4 (148-233)||(15880753-15880838)
chr4 (56-162)||(15099351-15099457)
chr4 (146-233)||(52873249-52873335)
chr4 (119-233)||(15868765-15868877)
chr4 (149-233)||(362189-362272)
chr4 (1-70)||(52873251-52873319)
chr4 (2-62)||(362213-362272)
chr4 (11-143)||(35812211-35812342)
chr4 (158-233)||(9923353-9923427)
chr4 (158-233)||(11479432-11479506)
chr4 (11-78)||(9923361-9923427)
chr4 (11-78)||(11479432-11479498)
chr4 (158-233)||(35812211-35812285)
chr4 (119-233)||(630830-630942)
chr4 (1-70)||(13844498-13844566)
chr4 (1-78)||(46642785-46642861)
chr4 (56-120)||(15190360-15190424)
chr4 (11-50)||(14185252-14185291)
chr4 (119-168)||(13812865-13812914)
chr4 (191-233)||(19609528-19609570)
chr4 (165-197)||(14185252-14185284)
[»] scaffold0116 (5 HSPs)
scaffold0116 (2-233)||(43732-43962)
scaffold0116 (2-188)||(47652-47837)
scaffold0116 (1-144)||(43878-44020)
scaffold0116 (149-225)||(47652-47728)
scaffold0116 (1-41)||(47798-47837)
[»] chr5 (27 HSPs)
chr5 (2-233)||(5889124-5889353)
chr5 (1-147)||(12122232-12122378)
chr5 (5-147)||(21555094-21555236)
chr5 (5-147)||(21557760-21557902)
chr5 (1-128)||(24212382-24212509)
chr5 (5-146)||(31455686-31455830)
chr5 (1-142)||(36460170-36460311)
chr5 (1-128)||(35852637-35852764)
chr5 (5-146)||(31455073-31455217)
chr5 (4-147)||(30615751-30615893)
chr5 (148-233)||(12122232-12122317)
chr5 (148-233)||(24212424-24212509)
chr5 (148-233)||(36460226-36460311)
chr5 (152-233)||(21557760-21557841)
chr5 (148-225)||(35852687-35852764)
chr5 (68-162)||(21741557-21741651)
chr5 (131-233)||(29915150-29915251)
chr5 (151-233)||(30615812-30615893)
chr5 (30-147)||(17875209-17875326)
chr5 (152-233)||(21555094-21555175)
chr5 (152-224)||(31455758-31455830)
chr5 (152-224)||(31455145-31455217)
chr5 (119-233)||(21871627-21871739)
chr5 (119-233)||(21875907-21876019)
chr5 (1-144)||(5889269-5889411)
chr5 (1-70)||(29915167-29915235)
chr5 (177-233)||(17875270-17875326)
[»] scaffold0009 (2 HSPs)
scaffold0009 (71-233)||(85191-85352)
scaffold0009 (1-70)||(85207-85275)
[»] chr3 (34 HSPs)
chr3 (71-233)||(18439864-18440025)
chr3 (3-147)||(31415399-31415543)
chr3 (27-233)||(12269513-12269718)
chr3 (5-147)||(31224669-31224811)
chr3 (1-147)||(15447711-15447854)
chr3 (119-233)||(49969934-49970048)
chr3 (104-233)||(20630147-20630275)
chr3 (1-142)||(11912921-11913062)
chr3 (1-104)||(6808175-6808278)
chr3 (150-233)||(31415460-31415543)
chr3 (148-230)||(11912980-11913062)
chr3 (148-225)||(6808201-6808278)
chr3 (152-233)||(31224669-31224750)
chr3 (1-144)||(49969963-49970106)
chr3 (56-162)||(1465423-1465529)
chr3 (148-230)||(15447711-15447793)
chr3 (57-153)||(49389644-49389740)
chr3 (158-233)||(49389772-49389848)
chr3 (1-70)||(20630191-20630259)
chr3 (149-233)||(1988944-1989028)
chr3 (1-70)||(18439941-18440009)
chr3 (11-144)||(49389772-49389906)
chr3 (179-225)||(40812050-40812096)
chr3 (2-70)||(1988944-1989012)
chr3 (119-158)||(14665631-14665670)
chr3 (179-233)||(5841985-5842039)
chr3 (135-233)||(23413322-23413417)
chr3 (175-217)||(30175304-30175346)
chr3 (191-233)||(40807200-40807242)
chr3 (32-78)||(40812050-40812096)
chr3 (121-162)||(4107286-4107327)
chr3 (121-162)||(4111138-4111179)
chr3 (121-162)||(16750477-16750518)
chr3 (135-167)||(12852440-12852472)
[»] scaffold0737 (2 HSPs)
scaffold0737 (1-147)||(6389-6535)
scaffold0737 (148-233)||(6389-6474)
[»] chr8 (23 HSPs)
chr8 (1-147)||(21579917-21580063)
chr8 (1-147)||(29763579-29763724)
chr8 (1-147)||(41680833-41680979)
chr8 (11-128)||(32807279-32807396)
chr8 (1-94)||(42560238-42560331)
chr8 (148-233)||(29763579-29763664)
chr8 (148-230)||(21579917-21579999)
chr8 (148-233)||(42560238-42560323)
chr8 (158-233)||(32807321-32807396)
chr8 (2-144)||(39833869-39834013)
chr8 (164-233)||(18760591-18760660)
chr8 (148-233)||(41680833-41680918)
chr8 (149-233)||(27472391-27472474)
chr8 (149-233)||(38550086-38550169)
chr8 (146-233)||(1327117-1327203)
chr8 (2-144)||(38550086-38550227)
chr8 (2-70)||(27472391-27472458)
chr8 (13-144)||(18760533-18760664)
chr8 (1-70)||(1327119-1327187)
chr8 (87-147)||(22965744-22965804)
chr8 (191-233)||(19139969-19140011)
chr8 (191-233)||(39936816-39936858)
chr8 (177-233)||(20982747-20982803)
[»] chr7 (32 HSPs)
chr7 (3-147)||(38480232-38480376)
chr7 (5-147)||(30820971-30821113)
chr7 (5-147)||(36685965-36686107)
chr7 (71-233)||(17232564-17232725)
chr7 (1-128)||(9320440-9320567)
chr7 (1-128)||(11092751-11092878)
chr7 (71-233)||(8468370-8468524)
chr7 (1-128)||(11085013-11085140)
chr7 (1-142)||(15213699-15213840)
chr7 (150-233)||(38480293-38480376)
chr7 (56-162)||(9389709-9389815)
chr7 (148-233)||(9320440-9320525)
chr7 (148-233)||(11085055-11085140)
chr7 (148-233)||(11092793-11092878)
chr7 (148-233)||(15213755-15213840)
chr7 (152-233)||(30820971-30821052)
chr7 (152-233)||(36685965-36686046)
chr7 (2-109)||(15439318-15439425)
chr7 (146-233)||(14270136-14270222)
chr7 (149-233)||(45847735-45847818)
chr7 (1-144)||(8468312-8468454)
chr7 (1-70)||(14270138-14270206)
chr7 (2-70)||(45847735-45847802)
chr7 (1-144)||(17232506-17232648)
chr7 (152-233)||(37727642-37727723)
chr7 (149-225)||(15439349-15439425)
chr7 (135-233)||(18302111-18302207)
chr7 (189-233)||(32434394-32434438)
chr7 (5-144)||(37727642-37727781)
chr7 (191-233)||(11066672-11066714)
chr7 (191-233)||(12371482-12371524)
chr7 (191-233)||(13148278-13148320)
[»] scaffold1351 (2 HSPs)
scaffold1351 (1-147)||(1561-1707)
scaffold1351 (148-225)||(1630-1707)
[»] scaffold0071 (2 HSPs)
scaffold0071 (1-147)||(14335-14481)
scaffold0071 (148-225)||(14404-14481)
[»] chr2 (20 HSPs)
chr2 (1-147)||(24865481-24865627)
chr2 (1-147)||(22500984-22501130)
chr2 (1-147)||(22508918-22509064)
chr2 (1-147)||(7672269-7672409)
chr2 (1-82)||(2524440-2524521)
chr2 (148-225)||(22501053-22501130)
chr2 (148-225)||(22508987-22509064)
chr2 (148-225)||(24865481-24865558)
chr2 (148-233)||(2524440-2524525)
chr2 (148-214)||(7672269-7672335)
chr2 (158-233)||(6576430-6576505)
chr2 (11-144)||(6576372-6576505)
chr2 (177-225)||(22501147-22501195)
chr2 (177-225)||(22509081-22509129)
chr2 (11-75)||(24436258-24436321)
chr2 (177-233)||(24883657-24883713)
chr2 (30-79)||(22501146-22501195)
chr2 (30-79)||(22509080-22509129)
chr2 (158-233)||(24436247-24436321)
chr2 (30-78)||(24883665-24883713)
[»] scaffold0395 (2 HSPs)
scaffold0395 (1-147)||(10890-11036)
scaffold0395 (148-233)||(10951-11036)
[»] scaffold0815 (2 HSPs)
scaffold0815 (15-147)||(479-611)
scaffold0815 (164-233)||(540-609)
[»] scaffold0599 (4 HSPs)
scaffold0599 (1-142)||(4615-4756)
scaffold0599 (1-142)||(197-338)
scaffold0599 (148-230)||(4674-4756)
scaffold0599 (148-230)||(256-338)
[»] scaffold1137 (1 HSPs)
scaffold1137 (56-162)||(2304-2410)
[»] scaffold0434 (2 HSPs)
scaffold0434 (148-233)||(6770-6855)
scaffold0434 (1-70)||(6770-6839)
[»] scaffold0100 (2 HSPs)
scaffold0100 (146-233)||(36140-36226)
scaffold0100 (1-78)||(36142-36218)
[»] scaffold0080 (2 HSPs)
scaffold0080 (11-143)||(59327-59458)
scaffold0080 (158-233)||(59327-59401)
[»] scaffold0061 (4 HSPs)
scaffold0061 (149-233)||(15439-15523)
scaffold0061 (149-233)||(24497-24581)
scaffold0061 (2-78)||(15439-15515)
scaffold0061 (2-78)||(24497-24573)
[»] scaffold0075 (1 HSPs)
scaffold0075 (119-233)||(8350-8462)
[»] scaffold0004 (2 HSPs)
scaffold0004 (147-217)||(362964-363033)
scaffold0004 (1-70)||(362964-363032)
[»] scaffold0810 (2 HSPs)
scaffold0810 (168-233)||(2988-3053)
scaffold0810 (10-70)||(3004-3063)
[»] scaffold0513 (2 HSPs)
scaffold0513 (146-233)||(10961-11047)
scaffold0513 (1-70)||(10963-11031)
[»] scaffold0001 (2 HSPs)
scaffold0001 (158-233)||(76946-77019)
scaffold0001 (11-78)||(76954-77019)
[»] scaffold0335 (2 HSPs)
scaffold0335 (158-233)||(861-935)
scaffold0335 (11-78)||(869-935)
[»] scaffold0802 (2 HSPs)
scaffold0802 (158-233)||(5478-5552)
scaffold0802 (11-70)||(5478-5536)
[»] scaffold0371 (2 HSPs)
scaffold0371 (158-233)||(3120-3194)
scaffold0371 (11-78)||(3128-3194)
[»] scaffold0124 (1 HSPs)
scaffold0124 (135-233)||(24726-24822)
[»] scaffold0221 (1 HSPs)
scaffold0221 (119-158)||(12864-12903)
[»] scaffold0384 (1 HSPs)
scaffold0384 (191-233)||(8192-8234)
[»] scaffold0375 (1 HSPs)
scaffold0375 (191-233)||(9108-9150)
[»] scaffold0134 (1 HSPs)
scaffold0134 (191-233)||(10032-10074)
[»] scaffold0192 (1 HSPs)
scaffold0192 (135-168)||(9875-9908)
[»] scaffold0142 (1 HSPs)
scaffold0142 (135-167)||(7720-7752)


Alignment Details
Target: chr6 (Bit Score: 154; Significance: 9e-82; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 27851343 - 27851111
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaatt-gttatatatgaagaatattattggtggt 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||| ||||    
T  27851343 atgatttaccttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaatttgttatatatgaagattattattgatggt 27851244  T
Q  100 tacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacg 199  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||  || ||||||| |||||||||||||| ||||||| |    
T  27851243 tacttgttgtgtatgtttaaatgatgttgtcttgttgttgtgctgaatatgatttactttgatgctt-aatgtgagaatatttatatattgtgaaagatg 27851145  T
Q  200 ttgatatgaagttgtaattgttatatttgatgat 233  Q
     ||||||||||||||| | ||| |||||||||||    
T  27851144 ctgatatgaagttgtattggttgtatttgatgat 27851111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 25956569 - 25956799
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtta 101  Q
    |||||||| |||||||||||||||||||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| ||||||    
T  25956569 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggtta 25956668  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgtt 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| | |    
T  25956669 cttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatattgtgaaagatgct 25956767  T
Q  202 gatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||||| ||| |||||||||||    
T  25956768 gatatgaagttgtaatggttgtatttgatgat 25956799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 20734158 - 20734304
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||     
T  20734158 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtg 20734257  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||||    
T  20734258 acttgctgcatatgtttaaatggtgttgtcttgctgttgtgatgaat 20734304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 22421108 - 22420981
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| | ||     
T  22421108 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatagtg 22421009  T
Q  101 acttgttgtatatgtttaaatgatgttg 128  Q
    |||||||| |||||| |||||| |||||    
T  22421008 acttgttgcatatgtctaaatggtgttg 22420981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 119 - 233
Target Start/End: Complemental strand, 19399928 - 19399814
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 218  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||     
T  19399928 aatgatgttgtcttactgttgtgatgaatatggtttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatg 19399829  T
Q  219 gttatatttgatgat 233  Q
    |||||||||||||||    
T  19399828 gttatatttgatgat 19399814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 2201260 - 2201133
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||     
T  2201260 atgatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtg 2201161  T
Q  101 acttgttgtatatgtttaaatgatgttg 128  Q
    ||||| || |||||| |||||| |||||    
T  2201160 acttgctgcatatgtctaaatggtgttg 2201133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34296980 - 34297072
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattatt 93  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||    
T  34296980 atgatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattatt 34297072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 20734158 - 20734243
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  20734158 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 20734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 22421108 - 22421023
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  22421108 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 22421023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 2201260 - 2201175
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  2201260 atgatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 2201175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 34296980 - 34297065
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  34296980 atgatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 34297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 19399895 - 19399822
Alignment:
Q  5 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  19399895 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatat 19399822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 25956715 - 25956857
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | | ||||||| ||||||| ||| ||| ||| || |||| ||| || |     
T  25956715 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatg 25956813  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    ||||| |||| ||  ||  ||||||||| ||||||| |||||||    
T  25956814 acttgctgtaaattatttgatgatgttgccttgctgatgtgatg 25956857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 31630622 - 31630705
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||||| |||| ||| |||| ||||||    
T  31630622 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttataatggttgtattagatgat 31630705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 18927954 - 18927880
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  18927954 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 18927880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 31630622 - 31630681
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaa 62  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||    
T  31630622 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaa 31630681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 18927954 - 18927888
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  18927954 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 18927888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 18708746 - 18708704
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  18708746 tgaaagatgttgatatgaagttgtaatggttatattggatgat 18708704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 23151072 - 23151114
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  23151072 tgaaagatgttgatatgaagttgtaatggttatattggatgat 23151114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 27322224 - 27322266
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  27322224 tgaaagatgttgatatgaagttgtaatggttatattggatgat 27322266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 16624547 - 16624506
Alignment:
Q  121 tgatgttgtcttgctgttgtgatgaatatgatttactttgat 162  Q
    ||||||| | ||| ||||||||||||||||||||||||||||    
T  16624547 tgatgttattttgttgttgtgatgaatatgatttactttgat 16624506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 8e-76; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 28194397 - 28194627
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtta 101  Q
    |||||||| |||||||||||||||||||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| ||||||    
T  28194397 tgatttacgttgatgattaaatgtgaaaaaatctatataatgtgaaagttgttgatatgtagttgcaaatgttatatatgaagattattattgatggtta 28194496  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgtt 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| |||    
T  28194497 cttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatattgtgaaagatgtt 28194595  T
Q  202 gatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||||| ||| |||||||||||    
T  28194596 gatatgaagttgtaatggttgtatttgatgat 28194627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 43697546 - 43697316
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtta 101  Q
    |||||||  |||||||||||||||||||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| ||||||    
T  43697546 tgatttaagttgatgattaaatgtgaaaagatctatatagtgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgttggtta 43697447  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgtt 201  Q
    |||| |||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||| | |||| ||||||| ||||||| | |    
T  43697446 cttgctgtatatgtttatatgatgctgtcttgctgttgtgataaatatgatttactttgatgatt-aatgtgagattattgatatattgtgaaagatgct 43697348  T
Q  202 gatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||||| ||| |||||||||||    
T  43697347 gatatgaagttgtaatggttttatttgatgat 43697316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 51274299 - 51274445
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| || || |||||||| ||||     
T  51274299 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtg 51274398  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || ||||||||||||| | |||| ||| |||||||||||||    
T  51274399 acttgatgcatatgtttaaatgtttttgttttgttgttgtgatgaat 51274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 162
Target Start/End: Complemental strand, 49261448 - 49261342
Alignment:
Q  56 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgattta 155  Q
    ||||||| |||||||||||||| ||||||| |||||||| |||||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||    
T  49261448 atatgaagttgtaattgttatacatgaagattattattgatggttacttgttatatatgtttaaatgatactgtcttgctgtcgtgatgaatatgattta 49261349  T
Q  156 ctttgat 162  Q
    |||||||    
T  49261348 ctttgat 49261342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8885538 - 8885457
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  8885538 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgtaatatatga 8885457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12328566 - 12328670
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| || |||||||| ||||     
T  12328566 atgatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaattgttatatatgatgattattattgatggtg 12328665  T
Q  101 acttg 105  Q
    |||||    
T  12328666 acttg 12328670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 20636955 - 20636851
Alignment:
Q  58 atgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttact 157  Q
    ||||| |||||||||||||| ||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  20636955 atgaagttgtaattgttatacatgaatattattattgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgattttct 20636856  T
Q  158 ttgat 162  Q
    |||||    
T  20636855 ttgat 20636851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 8885538 - 8885453
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||    
T  8885538 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgtaatatatgatgat 8885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 12328566 - 12328651
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  12328566 atgatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaattgttatatatgatgat 12328651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 51274299 - 51274376
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  51274299 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatat 51274376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 35981700 - 35981806
Alignment:
Q  56 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgattta 155  Q
    ||||||| ||| |||||||  | ||||||| || || || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  35981700 atatgaagttgaaattgttgcacatgaagattactaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgattga 35981799  T
Q  156 ctttgat 162  Q
    |||||||    
T  35981800 ctttgat 35981806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 51326974 - 51326907
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51326974 ttgatgattaaatgtgaacatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 51326907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 51326974 - 51326904
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatg 81  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  51326974 ttgatgattaaatgtgaacatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatg 51326904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 43543139 - 43543069
Alignment:
Q  146 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 217  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  43543139 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 43543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 28194543 - 28194611
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  28194543 atgatttactttgatgatt-aatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 28194611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43543137 - 43543069
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  43543137 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 43543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 46382652 - 46382733
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||| ||||| ||||| |||||||||||  | ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  46382652 tgatttactttgatgattaa-tgtgagaatatttatat--tgtgaaagatgttgatatgaagttgtaatggttttattagatgat 46382733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43697400 - 43697332
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||| ||||||| | |||| ||||||||||||||| | | ||||||| |||||||    
T  43697400 atgatttactttgatgatt-aatgtgagattattgatatattgtgaaagatgctgatatgaagttgtaat 43697332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 46382652 - 46382717
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    |||||||||||||||||||| ||||| ||||||||||  |||||||||| ||| ||||||| |||||||    
T  46382652 tgatttactttgatgattaa-tgtgagaatatttata--ttgtgaaagatgttgatatgaagttgtaat 46382717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 48301121 - 48301078
Alignment:
Q  179 atttatatattatgaaagacgttgatatgaagttgtaattgtta 222  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  48301121 atttatatattgtgaaagatgttgatatgaagttgtaatggtta 48301078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 39244030 - 39244071
Alignment:
Q  121 tgatgttgtcttgctgttgtgatgaatatgatttactttgat 162  Q
    ||||||| | ||| ||||||||||||||||||||||||||||    
T  39244030 tgatgttattttgttgttgtgatgaatatgatttactttgat 39244071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 39247585 - 39247626
Alignment:
Q  121 tgatgttgtcttgctgttgtgatgaatatgatttactttgat 162  Q
    ||||||| | ||| ||||||||||||||||||||||||||||    
T  39247585 tgatgttattttgttgttgtgatgaatatgatttactttgat 39247626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 41388135 - 41388176
Alignment:
Q  121 tgatgttgtcttgctgttgtgatgaatatgatttactttgat 162  Q
    ||||||| | ||| ||||||||||||||||||||||||||||    
T  41388135 tgatgttattttgttgttgtgatgaatatgatttactttgat 41388176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 46642997 - 46642777
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 110  Q
    ||||||||||| || ||||| ||||||||||||||||||  ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  46642997 ttgatgattaa-tgcgaaaagatttatatattgtgaaagttgttaatatgaagttgtaattgttacatatgaagaatattattggtggttacttgttgta 46642899  T
Q  111 tatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaag 210  Q
    ||||||||||||||| || |||||||||||||||||||||||||| |||||| ||| ||||||| || ||||||| | | ||||||||||||||||||||    
T  46642898 tatgtttaaatgatgctgccttgctgttgtgatgaatatgatttaatttgatgatt-aatgtgagaagatttataaactgtgaaagacgttgatatgaag 46642800  T
Q  211 ttgtaattgttatatttgatgat 233  Q
    ||||||| |||||||||||||||    
T  46642799 ttgtaatggttatatttgatgat 46642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 13844712 - 13844485
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtta 101  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| ||||||    
T  13844712 tgatttacgttgatgattaaatgtgaaaatatctatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggtta 13844613  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgtt 201  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| | |    
T  13844612 cttgttgtatatgtttaaatgatgttgtcttactgttgtgatgaatatgatttactttgattatt-aatgtgagaatatttatatattgtgaaagatgct 13844514  T
Q  202 gatatgaagttgtaattgttatatttgat 230  Q
    |||||||||||||||| ||| ||||||||    
T  13844513 gatatgaagttgtaatggttgtatttgat 13844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 33186243 - 33186097
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| || |||||||| ||||     
T  33186243 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtg 33186144  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || || ||||||||||||| ||||||| |||||||||||||    
T  33186143 acttgctgcatttgtttaaatgatgatgtcttgttgttgtgatgaat 33186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15880838 - 15880717
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||     
T  15880838 atgatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtg 15880739  T
Q  101 acttgttgtatatgtttaaatg 122  Q
    ||||| |  |||||| ||||||    
T  15880738 acttgctacatatgtctaaatg 15880717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 33186243 - 33186158
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33186243 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgatgat 33186158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 15880838 - 15880753
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  15880838 atgatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 15880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 162
Target Start/End: Complemental strand, 15099457 - 15099351
Alignment:
Q  56 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgattta 155  Q
    ||||||| ||| |||||||||| || |||| ||||| || |||||||||| |||||||||||||| |||||||||||||||| || |||||||||||| |    
T  15099457 atatgaagttgaaattgttatacataaagattattaatgatggttacttgctgtatatgtttaaaagatgttgtcttgctgtcgtaatgaatatgattga 15099358  T
Q  156 ctttgat 162  Q
    |||||||    
T  15099357 ctttgat 15099351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 52873249 - 52873335
Alignment:
Q  146 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  52873249 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 52873335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 15868765 - 15868877
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 218  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||| || |||| ||||||||| |||| || | |||||||||||||||||     
T  15868765 aatgatgttgttttgttgttgtgatgaatatgatttactttgatgatt-aatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatg 15868862  T
Q  219 gttatatttgatgat 233  Q
     |||||| |||||||    
T  15868863 attatatctgatgat 15868877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 362272 - 362189
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||| |||| ||| |||| ||||||    
T  362272 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagacgttgatatgaagttataatggttgtattagatgat 362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 52873251 - 52873319
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  52873251 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 52873319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 362272 - 362213
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaa 62  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  362272 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagacgttgatatgaa 362213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 35812211 - 35812342
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 110  Q
    |||||||||||||||| ||  ||||||||||||||||||| ||| ||||||| ||||||| |||||||  || || |||| ||| || | ||||| || |    
T  35812211 ttgatgattaaatgtggaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 35812309  T
Q  111 tatgtttaaatgatgttgtcttgctgttgtgat 143  Q
    |||  |  |||||||||||||||||||||||||    
T  35812310 tattatctaatgatgttgtcttgctgttgtgat 35812342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 9923427 - 9923353
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  9923427 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 9923353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 11479432 - 11479506
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  11479432 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 11479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 9923427 - 9923361
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  9923427 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 9923361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 11479432 - 11479498
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  11479432 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 11479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 35812211 - 35812285
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||| ||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  35812211 ttgatgattaaatgtggaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 35812285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 630830 - 630942
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 218  Q
    |||||||||||  || ||||||||||||||  |||||||||||| ||| |||| || |||| ||||||||| |||| || | |||||||||||||||||     
T  630830 aatgatgttgttctgttgttgtgatgaatacaatttactttgatgatt-aatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatg 630927  T
Q  219 gttatatttgatgat 233  Q
     || |||||||||||    
T  630928 attgtatttgatgat 630942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13844566 - 13844498
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||||||| | | ||||||| |||||||    
T  13844566 atgatttactttgattatt-aatgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaat 13844498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46642861 - 46642785
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||| |||||||||| ||||||| || ||||||| | ||||||||||||| ||||||| ||||||| |||||||    
T  46642861 atgatttaatttgatgatt-aatgtgagaagatttataaactgtgaaagacgttgatatgaagttgtaatggttatat 46642785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 15190424 - 15190360
Alignment:
Q  56 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaa 120  Q
    ||||||| ||| |||||||||| ||||||| ||||| || |||||||||| ||||||||||||||    
T  15190424 atatgaagttgaaattgttatacatgaagattattaatgatggttacttgctgtatatgtttaaa 15190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 14185291 - 14185252
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaaga 50  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  14185291 ttgatggttaaatgtgaaaatatttatatattgtgaaaga 14185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 13812865 - 13812914
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaa 168  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||| |||||    
T  13812865 aatgatgttgttttgttgttgtgatgaatatgatttacttagatgattaa 13812914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 19609570 - 19609528
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  19609570 tgaaagatgttgatatgaagttgtaatggttatattggatgat 19609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 14185284 - 14185252
Alignment:
Q  165 ttaaatgtgaaaatatttatatattatgaaaga 197  Q
    ||||||||||||||||||||||||| |||||||    
T  14185284 ttaaatgtgaaaatatttatatattgtgaaaga 14185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 140; Significance: 2e-73; HSPs: 5)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 43732 - 43962
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtta 101  Q
    |||||||| |||||||||||||||||||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| ||||||    
T  43732 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaaatgttatatatgaagattattattgatggtta 43831  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgtt 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| | |    
T  43832 cttgctgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatattgtgaaagatgct 43930  T
Q  202 gatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||||| ||| |||||||||||    
T  43931 gatatgaagttgtaatggttgtatttgatgat 43962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 47652 - 47837
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtta 101  Q
    |||||||| |||||||||||||||||||| || |||||| ||||||||  ||| ||||| | ||| || ||||||||||||||| |||||||| ||||||    
T  47652 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaaatgttatatatgaagattattattgatggtta 47751  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatat 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  47752 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatat 47837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 43878 - 44020
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | | ||||||| ||||||| ||| ||| ||| || |||| ||| || |     
T  43878 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatg 43976  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    ||||| |||| ||  ||  ||||||||| ||||||| |||||||    
T  43977 acttgctgtaaattatttgatgatgttgccttgctgatgtgatg 44020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 47652 - 47728
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    |||||||| ||||| |||||||||||||| || |||||| | ||||||  ||||||||| ||||| || ||||||||    
T  47652 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaaatgttatat 47728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47798 - 47837
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatat 41  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  47798 atgatttactttgatgatt-aatgtgagaatatttatatat 47837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 5889124 - 5889353
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtta 101  Q
    |||||||| |||||||||||||||||||| || |||||| ||||||||  ||| ||||| | ||| |||||||||| ||||||| |||||||| ||||||    
T  5889124 tgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaattgttatacatgaagattattattgatggtta 5889223  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgtt 201  Q
    |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| | |    
T  5889224 cttgctgtatatgtttaaatgatgttgtctt-ctgtcgtgatgaatatgatttactttgatgatt-aatgtgagaatatttatatattgtgaaagatgct 5889321  T
Q  202 gatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||||| ||| |||||||||||    
T  5889322 gatatgaagttgtaatggttgtatttgatgat 5889353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12122232 - 12122378
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||| ||||     
T  12122232 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtg 12122331  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    |||||  | |||||||||||||||| |||||||||||||||||||||    
T  12122332 acttgcggcatatgtttaaatgatgatgtcttgctgttgtgatgaat 12122378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 21555094 - 21555236
Alignment:
Q  5 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 104  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||||||||||||||| || |||||||| |||| ||||    
T  21555094 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaattgttatatatgatgattattattgatggtgactt 21555193  T
Q  105 gttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    | || ||||||||||||||||||||||||||||||||||||||    
T  21555194 gctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 21555236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 21557760 - 21557902
Alignment:
Q  5 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 104  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||| | || ||||    
T  21557760 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatagtgactt 21557859  T
Q  105 gttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    | || ||||||||||||||||||||||||||||| ||||||||    
T  21557860 gctgcatatgtttaaatgatgttgtcttgctgttatgatgaat 21557902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 24212509 - 24212382
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || || ||||| ||||     
T  24212509 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattaatattgatggtg 24212410  T
Q  101 acttgttgtatatgtttaaatgatgttg 128  Q
    ||||| || |||||| ||||||||||||    
T  24212409 acttgctgcatatgtctaaatgatgttg 24212382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 31455830 - 31455686
Alignment:
Q  5 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga---agaatattattggtggtta 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||| ||||    || |||||||| |||| |    
T  31455830 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaatcgttataaatgatattgattattattgatggtga 31455731  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaa 146  Q
    |||| || |||||||||||||||||||||||||||||||||||||    
T  31455730 cttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaa 31455686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 36460311 - 36460170
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||  || |     
T  36460311 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattaatgttg 36460212  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtga 142  Q
    ||||| || ||||  || |||| ||||||||||| |||||||    
T  36460211 acttgctgcatattatttaatggtgttgtcttgcggttgtga 36460170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 35852764 - 35852637
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || || |||||||| ||||     
T  35852764 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatacgatgattattattgatggtg 35852665  T
Q  101 acttgttgtatatgtttaaatgatgttg 128  Q
     |||| || |||||| |||||| |||||    
T  35852664 gcttgctgcatatgtctaaatggtgttg 35852637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 31455217 - 31455073
Alignment:
Q  5 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga---agaatattattggtggtta 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||| |||||| ||||    || |||||||| |||| |    
T  31455217 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgtaatcgttataaatgatattgattattattgatggtga 31455118  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaa 146  Q
    |||| || |||||||||||||||||||||||||||||||||||||    
T  31455117 cttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaa 31455073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 30615893 - 30615751
Alignment:
Q  4 atttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttact 103  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||  ||| || ||||| || |||| |||    
T  30615893 atttacttttatgattaaatgtgaaaatatt-atatattgtgaaagacgttgatatgaagttgtaattgttataattgatgattattaatgatggtgact 30615795  T
Q  104 tgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    || || ||||||||||| |||| ||||||||||||| |||||||    
T  30615794 tgctgcatatgtttaaacgatgatgtcttgctgttgcgatgaat 30615751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 12122232 - 12122317
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  12122232 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 12122317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 24212509 - 24212424
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  24212509 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 24212424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 36460311 - 36460226
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  36460311 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 36460226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 21557760 - 21557841
Alignment:
Q  152 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  21557760 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 21557841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 35852764 - 35852687
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  35852764 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatat 35852687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 21741557 - 21741651
Alignment:
Q  68 aattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgat 162  Q
    |||||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | ||||||    
T  21741557 aattgttatacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgttgtcttgctgtcgtgatgtatatgattgaatttgat 21741651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 29915150 - 29915251
Alignment:
Q  131 ttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 230  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| |||    
T  29915150 ttgctgttgtgatgaatatgatctactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagat 29915248  T
Q  231 gat 233  Q
    |||    
T  29915249 gat 29915251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 30615893 - 30615812
Alignment:
Q  151 atttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  30615893 atttacttttatgattaaatgtgaaaatatt-atatattgtgaaagacgttgatatgaagttgtaattgttataattgatgat 30615812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 17875326 - 17875209
Alignment:
Q  30 atatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgt 129  Q
    ||||||||||| ||  ||||||||| ||||||| || |||||||||||||||| || |||||||| |||| ||||| || ||||||||||||||| || |    
T  17875326 atatttatataatgataaagacgttgatatgaagttctaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatattat 17875227  T
Q  130 cttgctgttgtgatgaat 147  Q
    ||||||||||||| ||||    
T  17875226 cttgctgttgtgaagaat 17875209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 21555094 - 21555175
Alignment:
Q  152 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| |||||||    
T  21555094 tttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaattgttatatatgatgat 21555175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 31455830 - 31455758
Alignment:
Q  152 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttata 224  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  31455830 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaatcgttata 31455758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 31455217 - 31455145
Alignment:
Q  152 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttata 224  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||||    
T  31455217 tttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgtaatcgttata 31455145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 21871627 - 21871739
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 218  Q
    ||||||| ||||||| |||||||||||||||||||||||||||  ||| |||| || |||| ||||||||| |||| || | |||||||||||||||||     
T  21871627 aatgatgctgtcttgttgttgtgatgaatatgatttactttgacgatt-aatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatg 21871724  T
Q  219 gttatatttgatgat 233  Q
     || |||||||||||    
T  21871725 attgtatttgatgat 21871739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 21875907 - 21876019
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 218  Q
    ||||||| ||||||| |||||||||||||||||||||||||||  ||| |||| || |||| ||||||||| |||| || | |||||||||||||||||     
T  21875907 aatgatgctgtcttgttgttgtgatgaatatgatttactttgacgatt-aatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatg 21876004  T
Q  219 gttatatttgatgat 233  Q
     || |||||||||||    
T  21876005 attgtatttgatgat 21876019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 5889269 - 5889411
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | | ||||||| ||||||| ||| ||| ||| || |||| ||| || |     
T  5889269 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatg 5889367  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    ||||| |||| ||  ||  ||| ||||| ||||||| |||||||    
T  5889368 acttgctgtaaattatttgatggtgttgccttgctgatgtgatg 5889411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29915167 - 29915235
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  29915167 atgatctactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 29915235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 17875326 - 17875270
Alignment:
Q  177 atatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||| |   |||||||||||||||||||| |||||||||||| |||||||    
T  17875326 atatttatataatgataaagacgttgatatgaagttctaattgttatatatgatgat 17875270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 85352 - 85191
Alignment:
Q  71 tgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaat 170  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||    
T  85352 tgttatatatgaagattattattgatggttacttgatgtatatgtttaaatgaagttgtcttgctgttgtgatgaatatgatttactttgatgatt-aat 85254  T
Q  171 gtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||    
T  85253 gtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatagttgtatttgatgat 85191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 85275 - 85207
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  85275 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 85207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 18439864 - 18440025
Alignment:
Q  71 tgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaat 170  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  18439864 tgttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgatgatt-aat 18439962  T
Q  171 gtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||| ||||| |||||||| ||||||| | ||||||||||||||||| ||| |||||||||||    
T  18439963 gtgagaatatctatatattgtgaaagatgatgatatgaagttgtaatggttgtatttgatgat 18440025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 31415543 - 31415399
Alignment:
Q  3 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||| |||| ||    
T  31415543 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgac 31415444  T
Q  103 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||| || ||||||||||||||||||||||||||||||||||||||    
T  31415443 ttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 31415399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 27 - 233
Target Start/End: Complemental strand, 12269718 - 12269513
Alignment:
Q  27 aaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgt 126  Q
    |||| ||||||||||||||||||  ||| ||||||| ||||| || ||| |||||||||||||||| ||||||||||||||||||||||||||||||||     
T  12269718 aaaagatttatatattgtgaaagttgttgatatgaagttgtattttttacatatgaagaatattatcggtggttacttgttgtatatgtttaaatgatgc 12269619  T
Q  127 tgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatt 226  Q
    || ||||||||||| ||||||||||||||  ||||| ||| ||||||| || ||||||| ||| |||| ||||||||||||||||||||||  |||||||    
T  12269618 tgccttgctgttgtcatgaatatgatttaagttgatgatt-aatgtgagaagatttataaattttgaaggacgttgatatgaagttgtaatgattatatt 12269520  T
Q  227 tgatgat 233  Q
    |||||||    
T  12269519 tgatgat 12269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 31224669 - 31224811
Alignment:
Q  5 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 104  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| || |||||||| |||| ||||    
T  31224669 tttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgactt 31224768  T
Q  105 gttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    | || ||||||||||||||||||||||||||||||||||||||    
T  31224769 gctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 31224811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 15447711 - 15447854
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||   || |||||||| ||||     
T  15447711 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatatat---gattattattgatggtg 15447807  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||    
T  15447808 acttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 15447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 49969934 - 49970048
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 218  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||     
T  49969934 aatgatgttgtcttcctgttgtgatgaatatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatg 49970033  T
Q  219 gttatatttgatgat 233  Q
    |||||||||||||||    
T  49970034 gttatatttgatgat 49970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 104 - 233
Target Start/End: Original strand, 20630147 - 20630275
Alignment:
Q  104 tgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttga 203  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||| ||||||| |||||||||||||| ||||||| |||||    
T  20630147 tgttgtatatgtttaaatgatgttgtcttgctgttgtaatgaatatgatttactttgacgatt-aatgtgagaatatttatatattgtgaaagatgttga 20630245  T
Q  204 tatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||| ||| |||| ||||||    
T  20630246 tatgaagttgtaatggttgtattagatgat 20630275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 11913062 - 11912921
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | |||||||| || |     
T  11913062 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttg 11912963  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtga 142  Q
    ||||| || ||||  || |||| ||||| ||||| |||||||    
T  11912962 acttgatgcatattatttaatggtgttgccttgcggttgtga 11912921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6808278 - 6808175
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | || |||||||| ||||     
T  6808278 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatataatgattattattgatggtg 6808179  T
Q  101 actt 104  Q
    ||||    
T  6808178 actt 6808175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 31415543 - 31415460
Alignment:
Q  150 gatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  31415543 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 31415460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 11913062 - 11912980
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 230  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  11913062 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 11912980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 6808278 - 6808201
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  6808278 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatat 6808201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 31224669 - 31224750
Alignment:
Q  152 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||    
T  31224669 tttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 31224750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 49969963 - 49970106
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||| ||| || |||| ||| || |     
T  49969963 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttg 49970062  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    ||||| || ||||  || |||| |  || |||||||||||||||    
T  49970063 acttgctgcatattatttaatggtactgccttgctgttgtgatg 49970106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 1465423 - 1465529
Alignment:
Q  56 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgattta 155  Q
    ||||||| ||| |||||||||| ||||||| ||||| || |||||||||| | ||||||||||||||||||||||||||||  ||||||||||||||| |    
T  1465423 atatgaagttgaaattgttatacatgaagattattaatgatggttacttgctctatatgtttaaatgatgttgtcttgctgccgtgatgaatatgattga 1465522  T
Q  156 ctttgat 162  Q
    |||||||    
T  1465523 ctttgat 1465529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 15447711 - 15447793
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 230  Q
    ||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  15447711 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatatatgat 15447793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 49389644 - 49389740
Alignment:
Q  57 tatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatt 153  Q
    |||||| ||| |||||||||| |||||||  ||||||  ||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  49389644 tatgaagttgaaattgttatacatgaagatcattattaatgggtacttattgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgatt 49389740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 49389772 - 49389848
Alignment:
Q  158 ttgataattaaatgtgaaaatattta--tatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| ||||||||||||||||||||  |||||| |||| |  |||||||||||||||||||||||||||||||||||    
T  49389772 ttgatgattaaatgtgaaaatatttagatatattgtgaa-gttgttgatatgaagttgtaattgttatatttgatgat 49389848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20630191 - 20630259
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  20630191 atgatttactttgacgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 20630259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 1988944 - 1989028
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| || ||||| |||||||||||||| || |||||| | ||||||  ||||||||||||||||||| ||| |||||||||||    
T  1988944 tgattcacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgaagttgtaatggttgtatttgatgat 1989028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18439941 - 18440009
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||||| | | ||||||| |||||||    
T  18439941 atgatttactttgatgattaa-tgtgagaatatctatatattgtgaaagatgatgatatgaagttgtaat 18440009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 49389772 - 49389906
Alignment:
Q  11 ttgatgattaaatgtgaaaatattt--atatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttg 108  Q
    |||||||||||||||||||||||||  |||||||||| |||  ||| ||||||| ||||||||||||||| ||| || |||| ||| || | ||||| ||    
T  49389772 ttgatgattaaatgtgaaaatatttagatatattgtg-aagttgttgatatgaagttgtaattgttatatttgatgattattgttgatgttgacttgctg 49389870  T
Q  109 tatatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    || ||  ||  ||| ||||| ||||||| |||||||    
T  49389871 taaattatttgatggtgttgccttgctgatgtgatg 49389906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 40812096 - 40812050
Alignment:
Q  179 atttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 40812050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 1988944 - 1989012
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||| || |||||||||||||||||||| || |||||| ||||||||  ||| ||||||| |||||||    
T  1988944 tgattcacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgaagttgtaat 1989012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 14665670 - 14665631
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactt 158  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  14665670 aatgatgttgttttgttgttgtgatgaatatgatttactt 14665631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 5842039 - 5841985
Alignment:
Q  179 atttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||| ||||||| | | ||| ||||||||||| |||||||||||||||    
T  5842039 atttatatattgtgaaagatgctcataagaagttgtaatggttatatttgatgat 5841985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 23413322 - 23413417
Alignment:
Q  135 tgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||||||||||| ||||| ||| |||| || |||| ||| ||||| |||| || | |||||||||||||||||  || |||||||||||    
T  23413322 tgttgtgatgaatatgatttac-ttgatgatt-aatgagagaata-ttacatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgat 23413417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 30175304 - 30175346
Alignment:
Q  175 aaatatttatatattatgaaagacgttgatatgaagttgtaat 217  Q
    ||||||||||||| | ||||||| |||||||||||||||||||    
T  30175304 aaatatttatatactgtgaaagatgttgatatgaagttgtaat 30175346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 40807242 - 40807200
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  40807242 tgaaagatgttgatatgaagttgtaatggttatattggatgat 40807200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 40812096 - 40812050
Alignment:
Q  32 atttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 40812050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 4107286 - 4107327
Alignment:
Q  121 tgatgttgtcttgctgttgtgatgaatatgatttactttgat 162  Q
    ||||||| | ||| ||||||||||||||||||||||||||||    
T  4107286 tgatgttattttgttgttgtgatgaatatgatttactttgat 4107327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 4111138 - 4111179
Alignment:
Q  121 tgatgttgtcttgctgttgtgatgaatatgatttactttgat 162  Q
    ||||||| | ||| ||||||||||||||||||||||||||||    
T  4111138 tgatgttattttgttgttgtgatgaatatgatttactttgat 4111179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 16750477 - 16750518
Alignment:
Q  121 tgatgttgtcttgctgttgtgatgaatatgatttactttgat 162  Q
    ||||||| | ||| ||||||||||||||||||||||||||||    
T  16750477 tgatgttattttgttgttgtgatgaatatgatttactttgat 16750518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 12852440 - 12852472
Alignment:
Q  135 tgttgtgatgaatatgatttactttgataatta 167  Q
    |||||||||||||||||||||||||||| ||||    
T  12852440 tgttgtgatgaatatgatttactttgatgatta 12852472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6389 - 6535
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||     
T  6389 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtg 6488  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || ||||||||||||| |||||||||||| |||||||||||    
T  6489 acttgctgcatatgtttaaatggtgttgtcttgctattgtgatgaat 6535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 6389 - 6474
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  6389 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 6474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21579917 - 21580063
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  | |||||||| ||||     
T  21579917 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgataattattattgatggtg 21580016  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||    
T  21580017 acttgctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 21580063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29763579 - 29763724
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||| | ||||     
T  29763579 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtg 29763678  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    | ||| || |||||||||||||||| |||||||||||||||||||||    
T  29763679 a-ttgctgcatatgtttaaatgatgatgtcttgctgttgtgatgaat 29763724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 41680833 - 41680979
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||  || |||| |||||||||||||||||||||| || |||||||| ||||     
T  41680833 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaattgttatatatgatgattattattgatggtg 41680932  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || ||||||||||||| || ||||||| |||||||||||||    
T  41680933 acttgctgcatatgtttaaatggtgatgtcttgttgttgtgatgaat 41680979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 32807396 - 32807279
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||| ||||| || |    
T  32807396 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgca 32807297  T
Q  111 tatgtttaaatgatgttg 128  Q
    ||||| |||||| |||||    
T  32807296 tatgtctaaatggtgttg 32807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 42560238 - 42560331
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattg 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||    
T  42560238 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaattgttatatatgatgattattattg 42560331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 29763579 - 29763664
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  29763579 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 29763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 21579917 - 21579999
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 230  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  21579917 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 21579999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 42560238 - 42560323
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||    
T  42560238 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaattgttatatatgatgat 42560323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 32807396 - 32807321
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  32807396 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 32807321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 39834013 - 39833869
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattg-ttatatatgaagaatattattggtggtt 100  Q
    |||||||| |||||||||||||||||||| || ||||||  ||||| |  ||| ||||||| ||| || || ||||||||||||| |||||||| |||||    
T  39834013 tgatttacgttgatgattaaatgtgaaaagatctatataacgtgaatgttgttgatatgaagttgcaaatggttatatatgaagattattattgatggtt 39833914  T
Q  101 acttgttgtatatgtttaaatgatg-ttgtcttgctgttgtgatg 144  Q
    ||| | ||||||||||||||||||| ||| ||||||| |||||||    
T  39833913 actcgctgtatatgtttaaatgatgattgccttgctgatgtgatg 39833869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 18760660 - 18760591
Alignment:
Q  164 attaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||| |||| |||||||||||||||    
T  18760660 attaaatgtgaaaagatttatatattgtgaaagatgttgatatgaagttataatggttatatttgatgat 18760591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 41680833 - 41680918
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||  ||||| |||||||||||||||||||||||||| |||||||  ||||||| || ||||||||||||||| |||||||    
T  41680833 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaattgttatatatgatgat 41680918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 27472391 - 27472474
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  27472391 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 27472474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 38550086 - 38550169
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  38550086 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 38550169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 1327117 - 1327203
Alignment:
Q  146 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| |||| || ||||||||||||||||||| ||| |||| ||||||    
T  1327117 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaatggttgtattagatgat 1327203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 38550086 - 38550227
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtta 101  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| ||||||| ||| |||  || || |||| ||| || | |    
T  38550086 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttga 38550184  T
Q  102 cttgttgtatatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    |||| |||| ||  ||  ||| ||||||||||||| |||||||    
T  38550185 cttgctgtaaattatttgatggtgttgtcttgctgatgtgatg 38550227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 27472391 - 27472458
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  27472391 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 27472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 18760664 - 18760533
Alignment:
Q  13 gatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtata 112  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||||||| || |||| ||||||| ||| || |||| ||| || | ||||| || |||    
T  18760664 gatgattaaatgtgaaaagatttatatattgtgaaagatgttgatatgaagttataatggttatatttgatgattattgttgatgttgacttgctgcata 18760565  T
Q  113 tgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    |  || |||| || || |||||| ||||||||    
T  18760564 ttatttaatggtgatgccttgctattgtgatg 18760533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1327119 - 1327187
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| || ||| ||||||| |||||||    
T  1327119 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaat 1327187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 22965804 - 22965744
Alignment:
Q  87 tattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    |||||||| |||| | ||| || ||||||||||||| ||||||||||||||| ||||||||    
T  22965804 tattattgatggtgatttgatgcatatgtttaaatggtgttgtcttgctgttatgatgaat 22965744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 19140011 - 19139969
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  19140011 tgaaagatgttgatatgaagttgtaatggttatattggatgat 19139969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 39936816 - 39936858
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  39936816 tgaaagatgttgatatgaagttgtaatggttatattggatgat 39936858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 20982747 - 20982803
Alignment:
Q  177 atatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||| |||||||| |||||||  |||||||||||||||||| ||| |||| ||||||    
T  20982747 atatatatatattgtgaaagatattgatatgaagttgtaatggttgtattagatgat 20982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 7e-55; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 38480376 - 38480232
Alignment:
Q  3 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttac 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||| |||| ||    
T  38480376 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgac 38480277  T
Q  103 ttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||| || |||| |||||||||||||||||||||||||||||||||    
T  38480276 ttgctgcatatatttaaatgatgttgtcttgctgttgtgatgaat 38480232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 30820971 - 30821113
Alignment:
Q  5 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| || |||||||| |||| ||||    
T  30820971 tttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaattgttatatatgatgattattattgatggtaactt 30821070  T
Q  105 gttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    | || |||||||||||||||||||||||| |||||||||||||    
T  30821071 gctgcatatgtttaaatgatgttgtcttgttgttgtgatgaat 30821113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 36685965 - 36686107
Alignment:
Q  5 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| || |||||||||||||||| || |||||||| |||| ||||    
T  36685965 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattgttatatatgatgattattattgatggtgactt 36686064  T
Q  105 gttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    | || ||||||||||||||||||||||||||||||||||||||    
T  36686065 gctgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 36686107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 17232725 - 17232564
Alignment:
Q  71 tgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaat 170  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |||    
T  17232725 tgttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgatgatgtcatgctgttgtgatgaatatgatttactttgatgatt-aat 17232627  T
Q  171 gtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||| |||||||||||||| ||||||| ||||||||||||||| ||| ||| |||| ||||||    
T  17232626 gtgagaatatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgat 17232564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9320440 - 9320567
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||     
T  9320440 atgatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtg 9320539  T
Q  101 acttgttgtatatgtttaaatgatgttg 128  Q
    |||||||| |||||| |||||| |||||    
T  9320540 acttgttgcatatgtctaaatggtgttg 9320567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11092878 - 11092751
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||| ||||     
T  11092878 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaattgttatatatgatgattattattgatggtg 11092779  T
Q  101 acttgttgtatatgtttaaatgatgttg 128  Q
    |||||||| ||| ||||||||| |||||    
T  11092778 acttgttgcatacgtttaaatggtgttg 11092751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 8468524 - 8468370
Alignment:
Q  71 tgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaat 170  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||| |    
T  8468524 tgttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgat-------tgctgttgtgatgaatatgatttactttgatgattaa-t 8468433  T
Q  171 gtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  8468432 gtgataatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 8468370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11085140 - 11085013
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||     
T  11085140 atgatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtg 11085041  T
Q  101 acttgttgtatatgtttaaatgatgttg 128  Q
    ||||| || ||| | ||||||| |||||    
T  11085040 acttgctgcatacgattaaatggtgttg 11085013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15213840 - 15213699
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || |||||||| || |     
T  15213840 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaattgttatatatgatgattattattgatgttg 15213741  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtga 142  Q
    ||||| || ||||  || |||| ||||| ||||| |||||||    
T  15213740 acttgctgcatattatttaatggtgttgccttgcggttgtga 15213699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 38480376 - 38480293
Alignment:
Q  150 gatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  38480376 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 38480293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 9389709 - 9389815
Alignment:
Q  56 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgattta 155  Q
    ||||||| ||| ||||| |||| ||||||| ||||| || |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  9389709 atatgaagttgaaattgatatacatgaagattattaatgatggttacttgctgtatatgtttaaatgatgttgtcttgctgtcgtgatgaatatgattga 9389808  T
Q  156 ctttgat 162  Q
    |||||||    
T  9389809 ctttgat 9389815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 9320440 - 9320525
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  9320440 atgatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 9320525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 11085140 - 11085055
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  11085140 atgatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 11085055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 11092878 - 11092793
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||    
T  11092878 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaattgttatatatgatgat 11092793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 15213840 - 15213755
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| |||||||    
T  15213840 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaattgttatatatgatgat 15213755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 30820971 - 30821052
Alignment:
Q  152 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  30820971 tttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaattgttatatatgatgat 30821052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 36685965 - 36686046
Alignment:
Q  152 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||    
T  36685965 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattgttatatatgatgat 36686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 15439425 - 15439318
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtta 101  Q
    |||||||| |||||||||||||||||||| || ||||   ||||||||  ||| ||||||| |||||||||||||||||||||| |||||||| ||||||    
T  15439425 tgatttacgttgatgattaaatgtgaaaagatctatactatgtgaaagttgttgatatgaagttgtaattgttatatatgaagattattattgatggtta 15439326  T
Q  102 cttgttgt 109  Q
    ||||||||    
T  15439325 cttgttgt 15439318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 14270136 - 14270222
Alignment:
Q  146 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  14270136 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 14270222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 45847735 - 45847818
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  45847735 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 45847818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 8468454 - 8468312
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| ||||||| ||| |||  || || |||| ||| || |     
T  8468454 atgatttactttgatgattaa-tgtgataatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttg 8468356  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    ||||| |||| ||  || |||| ||||| ||||||| |||||||    
T  8468355 acttgctgtaaattatttaatggtgttgccttgctgatgtgatg 8468312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14270138 - 14270206
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  14270138 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 14270206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 45847735 - 45847802
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  45847735 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 45847802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 17232648 - 17232506
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| ||| ||| ||| |||  || || |||| ||| || |     
T  17232648 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgattattgttgctgttg 17232550  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    ||||| |||||||  ||  ||| ||||| ||||||| |||||||    
T  17232549 acttgctgtatattatttgatggtgttgccttgctgatgtgatg 17232506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 37727642 - 37727723
Alignment:
Q  152 tttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| ||||| |||||||||||||| || |||||| | ||||||  || |||||||||||||||| ||| |||||||||||    
T  37727642 tttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgtagatatgaagttgtaatggttgtatttgatgat 37727723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 15439425 - 15439349
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    |||||||| ||||| |||||||||||||| || ||||   | ||||||  |||||||||||||||||||||||||||    
T  15439425 tgatttacgttgatgattaaatgtgaaaagatctatactatgtgaaagttgttgatatgaagttgtaattgttatat 15439349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 18302207 - 18302111
Alignment:
Q  135 tgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||||||||||||||||| ||| | || || |||| ||||||||| || | || | |||||||||||||||||  || |||||||||||    
T  18302207 tgttgtgatgaatatgatttactttgatgatt-attgagagaata-ttatatattgtggatgaagatgatatgaagttgtaatgattgtatttgatgat 18302111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 32434394 - 32434438
Alignment:
Q  189 tatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||    
T  32434394 tatgaaagatgttgatatgaagttgtaatggttatattggatgat 32434438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 37727642 - 37727781
Alignment:
Q  5 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttactt 104  Q
    ||||| |||||||||||||||||||| || |||||| ||||||||  ||  ||||||| ||||||| ||| ||| ||| || |||| ||| || | ||||    
T  37727642 tttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgtagatatgaagttgtaatggttgtatttgatgattattgttgatgttgactt 37727741  T
Q  105 gttgtatatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    | |||| ||  ||  ||| ||||| ||||||| |||||||    
T  37727742 gctgtaaattatttgatggtgttgccttgctgatgtgatg 37727781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 11066714 - 11066672
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  11066714 tgaaagatgttgatatgaagttgtaatagttatattggatgat 11066672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 12371524 - 12371482
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  12371524 tgaaagatgttgatatgaagttgtaatggttatattggatgat 12371482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 13148278 - 13148320
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  13148278 tgaaagatgttgatatgaagttgtaatggttatattagatgat 13148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 1707 - 1561
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| || || |||||||| ||||     
T  1707 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtg 1608  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || |||||||||||||||||||||||| |||||||||||||    
T  1607 acttgatgcatatgtttaaatgatgttgtcttgttgttgtgatgaat 1561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 1707 - 1630
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1707 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatat 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14481 - 14335
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||| || || |||||||| ||||     
T  14481 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtg 14382  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||    
T  14381 acttgatgcatatgtttaaatgatgttgtcttgctgttgtgatgaat 14335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 14481 - 14404
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||||||| |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  14481 atgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaattgttatat 14404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 24865481 - 24865627
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| || || |||||||| ||||     
T  24865481 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtg 24865580  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||    
T  24865581 acttgatgcatatgtttaaatgatgttgtcttgctattgtgatgaat 24865627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 22501130 - 22500984
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| || || || ||||| ||||     
T  22501130 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggta 22501031  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || |||||||||||||||| ||||||||| |||||||||||    
T  22501030 acttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaat 22500984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 22509064 - 22508918
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| || || || ||||| ||||     
T  22509064 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggta 22508965  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || |||||||||||||||| ||||||||| |||||||||||    
T  22508964 acttgctgcatatgtttaaatgatgctgtcttgctattgtgatgaat 22508918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 7672269 - 7672409
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||      | |||||||||| || || |||||||| ||||     
T  7672269 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatga------agttgttatataagatgattattattgatggtg 7672362  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || ||| |||||||||||| |||||||||||||||||||||    
T  7672363 acttgatgcatacgtttaaatgatgctgtcttgctgttgtgatgaat 7672409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2524440 - 2524521
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatga 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  2524440 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatcaaattgtaattgttacatatga 2524521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 22501130 - 22501053
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22501130 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22501053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 22509064 - 22508987
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22509064 atgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22508987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 24865481 - 24865558
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  24865481 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatat 24865558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 2524440 - 2524525
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| || |||||||    
T  2524440 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatcaaattgtaattgttacatatgatgat 2524525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 7672269 - 7672335
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgt 214  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7672269 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgt 7672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 6576505 - 6576430
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  6576505 ttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgat 6576430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 6576505 - 6576372
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 110  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||| ||||||| ||||||| ||||||| ||| || |||| ||| || | ||||| || |    
T  6576505 ttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacttgctgca 6576406  T
Q  111 tatgtttaaatgatgttgtcttgctgttgtgatg 144  Q
    |||  || |||| || || |||||| ||||||||    
T  6576405 tattatttaatggtgctgccttgctattgtgatg 6576372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 22501195 - 22501147
Alignment:
Q  177 atatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22501195 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 22509129 - 22509081
Alignment:
Q  177 atatttatatattatgaaagacgttgatatgaagttgtaattgttatat 225  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22509129 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22509081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 24436321 - 24436258
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgtta 75  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  24436321 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaaattgtaatggtta 24436258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 24883713 - 24883657
Alignment:
Q  177 atatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  24883713 atatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 24883657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 22501195 - 22501146
Alignment:
Q  30 atatttatatattgtgaaagacgttaatatgaaattgtaattgttatata 79  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  22501195 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatata 22501146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 22509129 - 22509080
Alignment:
Q  30 atatttatatattgtgaaagacgttaatatgaaattgtaattgttatata 79  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  22509129 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatata 22509080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 24436321 - 24436247
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||  ||||||||||| ||||||| ||||||||||| ||||||| |||| ||| ||||||    
T  24436321 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaaattgtaatggttacattggatgat 24436247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 24883713 - 24883665
Alignment:
Q  30 atatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    ||||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  24883713 atatttatatattgtgaaagatgttgatatgaagttgtaatggttatat 24883665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 11036 - 10890
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||| || |||||||| | ||     
T  11036 atgatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaattgttatatatgatgattattattgattgtg 10937  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||    
T  10936 acttgctgcatatgtttaaatgatgttgtcttgctgttttgatgaat 10890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 11036 - 10951
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  11036 atgatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaattgttatatatgatgat 10951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 611 - 479
Alignment:
Q  15 tgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatg 114  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || |||||||| |||| ||||| || |||||    
T  611 tgattaaatgagaaaatatttatatattgtgaaagacgttgatatgaaattataattgttatatatgatgattattattgatggtgacttgctgcatatg 512  T
Q  115 tttaaatgatgttgtcttgctgttgtgatgaat 147  Q
    || ||||||||||||||||||||||||||||||    
T  511 ttaaaatgatgttgtcttgctgttgtgatgaat 479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 609 - 540
Alignment:
Q  164 attaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  609 attaaatgagaaaatatttatatattgtgaaagacgttgatatgaaattataattgttatatatgatgat 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 82; Significance: 8e-39; HSPs: 4)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4756 - 4615
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | |||||||| || |     
T  4756 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttg 4657  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtga 142  Q
    ||||| || ||||  || |||| ||||| ||||| |||||||    
T  4656 acttgatgcatattatttaatggtgttgccttgcggttgtga 4615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 338 - 197
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggtt 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | |||||||| || |     
T  338 atgatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttg 239  T
Q  101 acttgttgtatatgtttaaatgatgttgtcttgctgttgtga 142  Q
    ||||| || ||||  || |||| ||||| ||||| |||||||    
T  238 acttgatgcatattatttaatggtgttgccttgcggttgtga 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 4756 - 4674
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 230  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  4756 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 338 - 256
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 230  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  338 atgatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 2304 - 2410
Alignment:
Q  56 atatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgtatatgtttaaatgatgttgtcttgctgttgtgatgaatatgattta 155  Q
    ||||||| ||| ||||||| || ||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |    
T  2304 atatgaagttgaaattgttgtacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgctgtcttgctgtcgtgatgaatatgattga 2403  T
Q  156 ctttgat 162  Q
    |||||||    
T  2404 ctttgat 2410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 6770 - 6855
Alignment:
Q  148 atgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||    
T  6770 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaatgattatatttgatgat 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6770 - 6839
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||    
T  6770 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaat 6839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 36140 - 36226
Alignment:
Q  146 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  36140 atatgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatattagatgat 36226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36142 - 36218
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  36142 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatat 36218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 59327 - 59458
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatatatgaagaatattattggtggttacttgttgta 110  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||||| |||||||||||||||  || || |||| ||| || | ||||| || |    
T  59327 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaattgttatattggatgattattgttgatgttgacttgctgca 59425  T
Q  111 tatgtttaaatgatgttgtcttgctgttgtgat 143  Q
    ||| ||| |||| ||||| |||||||| |||||    
T  59426 tattttttaatggtgttgccttgctgtcgtgat 59458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 59327 - 59401
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  59327 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaattgttatattggatgat 59401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 15439 - 15523
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||  ||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||  ||||||||||| ||||||    
T  15439 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcgatgat 15523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 24497 - 24581
Alignment:
Q  149 tgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||  ||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||  ||||||||||| ||||||    
T  24497 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcgatgat 24581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 15439 - 15515
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| | ||| ||||||| |||  ||||||||||    
T  15439 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatat 15515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 24497 - 24573
Alignment:
Q  2 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| | ||| ||||||| |||  ||||||||||    
T  24497 tgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatat 24573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 8350 - 8462
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 218  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||| ||| |||| || |||| ||||||||| |||| || | |||||||||||||||||     
T  8350 aatgatgctgtcttgttgtcgtgatgaatatgatttactttgatgatt-aatgagagaata-ttatatattgtgaatgatgatgatatgaagttgtaatg 8447  T
Q  219 gttatatttgatgat 233  Q
     || |||||||||||    
T  8448 attgtatttgatgat 8462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 363033 - 362964
Alignment:
Q  147 tatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 217  Q
    |||||||||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  363033 tatgatttactttgatgattaa-tgtgagaatatttatatattttgaaagatgttgatatgaagttgtaat 362964  T

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Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 363032 - 362964
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||| ||||||| |||||||    
T  363032 atgatttactttgatgattaa-tgtgagaatatttatatattttgaaagatgttgatatgaagttgtaat 362964  T

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Target: scaffold0810 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 3053 - 2988
Alignment:
Q  168 aatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||    
T  3053 aatgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgat 2988  T

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Target: scaffold0810; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 3063 - 3004
Alignment:
Q  10 tttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  3063 tttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 3004  T

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Target: scaffold0513 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 10961 - 11047
Alignment:
Q  146 atatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||||||||||||| ||| | ||||| |||||||||||||| | ||||| ||||||||||||||||||| ||| |||| ||||||    
T  10961 atatgatttactttgatgattta-tgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaatggttgtattagatgat 11047  T

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Target: scaffold0513; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10963 - 11031
Alignment:
Q  1 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    ||||||||||||||||||| | ||||| |||||||||||||||| ||||| ||| ||||||| |||||||    
T  10963 atgatttactttgatgattta-tgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaat 11031  T

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Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 77019 - 76946
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||||  ||||||||| ||||||| || |||||||||||||||| |||||||| ||||||    
T  77019 ttgatgattaaatgtgaaaat--ttatatattgtgaaagatgtggatatgaagttgtaatggttatattggatgat 76946  T

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Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 77019 - 76954
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||||||||||||||||  ||||||||||||||||| ||  ||||||| ||||||| |||||||    
T  77019 ttgatgattaaatgtgaaaat--ttatatattgtgaaagatgtggatatgaagttgtaatggttatat 76954  T

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Target: scaffold0335 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 935 - 861
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||  ||| ||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  935 ttgatgattaaatgtgaaag-attaatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 861  T

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Target: scaffold0335; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 935 - 869
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||||||||||||||  ||| ||||||||||||||| ||| ||||||| ||||||| |||||||    
T  935 ttgatgattaaatgtgaaag-attaatatattgtgaaagatgttgatatgaagttgtaatggttatat 869  T

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Target: scaffold0802 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 5478 - 5552
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||  ||||||||||| ||||||  |||||||||||||||||||  ||||||| ||||||    
T  5478 ttgatgattaaatgtgaaag-atttatatattgtgaaaggtgttgatatgaagttgtaatgtttatattggatgat 5552  T

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Target: scaffold0802; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 5478 - 5536
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaat 70  Q
    |||||||||||||||||||  ||||||||||||||||||  ||| ||||||| |||||||    
T  5478 ttgatgattaaatgtgaaag-atttatatattgtgaaaggtgttgatatgaagttgtaat 5536  T

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Target: scaffold0371 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 3194 - 3120
Alignment:
Q  158 ttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||| |||||||||||||  ||||||||||  ||||| | ||||||||||||||||||| |||||||| ||||||    
T  3194 ttgatgattaaatgtgaaag-atttatatatcgtgaaaaatgttgatatgaagttgtaatggttatattggatgat 3120  T

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Target: scaffold0371; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 3194 - 3128
Alignment:
Q  11 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttaatatgaaattgtaattgttatat 78  Q
    |||||||||||||||| ||| |||||||||| |||||| | ||| ||||||| ||||||| |||||||    
T  3194 ttgatgattaaatgtg-aaagatttatatatcgtgaaaaatgttgatatgaagttgtaatggttatat 3128  T

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Target: scaffold0124 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 24726 - 24822
Alignment:
Q  135 tgttgtgatgaatatgatttactttgataattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    |||||||||||||||||||||||||||| ||| | || || |||| ||||||||| || | || | |||||||||||||||||  || |||||||||||    
T  24726 tgttgtgatgaatatgatttactttgatgatt-attgagagaata-ttatatattgtggatgatgatgatatgaagttgtaatgattgtatttgatgat 24822  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 12864 - 12903
Alignment:
Q  119 aatgatgttgtcttgctgttgtgatgaatatgatttactt 158  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  12864 aatgatgttgttttgttgttgtgatgaatatgatttactt 12903  T

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Target: scaffold0384 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 8192 - 8234
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  8192 tgaaagatgttgatatgaagttgtaatggttatattggatgat 8234  T

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Target: scaffold0375 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 9108 - 9150
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  9108 tgaaagatgttgatatgaagttgtaatggttatattggatgat 9150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 10032 - 10074
Alignment:
Q  191 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 233  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  10032 tgaaagatgttgatatgaagttgtaatggttatattggatgat 10074  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 9908 - 9875
Alignment:
Q  135 tgttgtgatgaatatgatttactttgataattaa 168  Q
    |||||||||||||||||||||||||||| |||||    
T  9908 tgttgtgatgaatatgatttactttgatgattaa 9875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 7720 - 7752
Alignment:
Q  135 tgttgtgatgaatatgatttactttgataatta 167  Q
    |||||||||||||||||||||||||||| ||||    
T  7720 tgttgtgatgaatatgatttactttgatgatta 7752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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