View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0662_high_11 (Length: 261)

Name: NF0662_high_11
Description: NF0662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0662_high_11
NF0662_high_11
[»] chr4 (27 HSPs)
chr4 (70-216)||(18890002-18890148)
chr4 (69-216)||(30679805-30679952)
chr4 (70-216)||(25687571-25687717)
chr4 (69-200)||(1913762-1913893)
chr4 (70-216)||(1874005-1874151)
chr4 (70-216)||(30673712-30673858)
chr4 (72-216)||(25697339-25697483)
chr4 (70-216)||(23187963-23188109)
chr4 (70-216)||(910860-911005)
chr4 (69-216)||(42404642-42404786)
chr4 (70-216)||(12435362-12435505)
chr4 (70-216)||(42411107-42411250)
chr4 (70-212)||(23200526-23200668)
chr4 (70-216)||(12659202-12659350)
chr4 (70-200)||(16325747-16325877)
chr4 (70-200)||(16334791-16334921)
chr4 (70-216)||(29333637-29333780)
chr4 (70-196)||(917322-917447)
chr4 (72-190)||(12439331-12439449)
chr4 (70-190)||(12428922-12429042)
chr4 (74-216)||(12665720-12665859)
chr4 (69-194)||(55325478-55325606)
chr4 (70-192)||(4393790-4393912)
chr4 (69-194)||(33360217-33360342)
chr4 (70-192)||(48305378-48305499)
chr4 (70-163)||(42119802-42119895)
chr4 (69-101)||(29330090-29330122)
[»] chr1 (17 HSPs)
chr1 (69-216)||(18540718-18540865)
chr1 (70-216)||(18534992-18535138)
chr1 (70-213)||(31092963-31093106)
chr1 (70-213)||(31099569-31099712)
chr1 (70-216)||(11660177-11660323)
chr1 (69-200)||(27347196-27347327)
chr1 (69-216)||(7876090-7876237)
chr1 (69-216)||(11654019-11654166)
chr1 (70-216)||(38984912-38985055)
chr1 (70-216)||(38991099-38991242)
chr1 (70-194)||(28519275-28519398)
chr1 (69-200)||(35625281-35625412)
chr1 (70-200)||(37356762-37356892)
chr1 (70-200)||(37365180-37365310)
chr1 (69-192)||(38736038-38736161)
chr1 (70-194)||(28512812-28512933)
chr1 (69-216)||(39492739-39492886)
[»] chr8 (12 HSPs)
chr8 (70-216)||(30714228-30714374)
chr8 (70-216)||(30722005-30722151)
chr8 (69-216)||(30727613-30727760)
chr8 (70-216)||(37204235-37204380)
chr8 (70-216)||(37209712-37209857)
chr8 (70-216)||(21241172-21241315)
chr8 (70-216)||(21247676-21247819)
chr8 (70-197)||(27679657-27679783)
chr8 (69-197)||(27683439-27683566)
chr8 (70-176)||(26196896-26197002)
chr8 (79-192)||(24042891-24043004)
chr8 (69-163)||(26196996-26197090)
[»] chr5 (10 HSPs)
chr5 (70-216)||(23058967-23059113)
chr5 (70-216)||(35264553-35264699)
chr5 (70-216)||(35270294-35270440)
chr5 (70-216)||(21171200-21171346)
chr5 (70-216)||(23053392-23053538)
chr5 (70-216)||(39653940-39654086)
chr5 (70-216)||(21178061-21178209)
chr5 (70-216)||(16675564-16675707)
chr5 (70-216)||(25365405-25365553)
chr5 (148-189)||(2135850-2135891)
[»] chr2 (11 HSPs)
chr2 (70-216)||(19437550-19437696)
chr2 (70-216)||(19443125-19443271)
chr2 (70-216)||(25445072-25445218)
chr2 (69-216)||(25454730-25454877)
chr2 (70-216)||(24053299-24053447)
chr2 (70-216)||(43287404-43287552)
chr2 (70-216)||(43293149-43293297)
chr2 (70-216)||(24056635-24056782)
chr2 (70-192)||(31437151-31437273)
chr2 (70-192)||(31433045-31433167)
chr2 (104-192)||(8872274-8872362)
[»] chr3 (12 HSPs)
chr3 (70-216)||(2982192-2982338)
chr3 (70-216)||(2978248-2978394)
chr3 (69-200)||(49491250-49491381)
chr3 (70-200)||(49486753-49486883)
chr3 (70-216)||(15752510-15752658)
chr3 (70-216)||(15758303-15758451)
chr3 (70-216)||(21453160-21453308)
chr3 (70-216)||(21458334-21458482)
chr3 (69-200)||(21473103-21473234)
chr3 (69-193)||(21877163-21877287)
chr3 (70-193)||(21883424-21883547)
chr3 (70-200)||(21477492-21477621)
[»] chr7 (11 HSPs)
chr7 (69-216)||(29176543-29176690)
chr7 (79-216)||(29185532-29185669)
chr7 (70-216)||(22822537-22822682)
chr7 (70-216)||(22826840-22826985)
chr7 (70-216)||(8242541-8242687)
chr7 (70-216)||(8248110-8248256)
chr7 (69-193)||(346563-346687)
chr7 (70-193)||(340329-340452)
chr7 (70-194)||(25830424-25830547)
chr7 (70-170)||(2068782-2068882)
chr7 (72-188)||(21989710-21989826)
[»] scaffold0014 (2 HSPs)
scaffold0014 (70-200)||(111875-112005)
scaffold0014 (70-130)||(106062-106122)
[»] scaffold0102 (1 HSPs)
scaffold0102 (70-216)||(14025-14171)
[»] chr6 (4 HSPs)
chr6 (69-194)||(18738572-18738697)
chr6 (70-196)||(23427482-23427607)
chr6 (69-196)||(23421635-23421761)
chr6 (69-200)||(33660922-33661053)
[»] scaffold0079 (1 HSPs)
scaffold0079 (70-200)||(57939-58069)
[»] scaffold0591 (1 HSPs)
scaffold0591 (70-193)||(9323-9446)
[»] scaffold0258 (1 HSPs)
scaffold0258 (72-190)||(6317-6435)


Alignment Details
Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 18890002 - 18890148
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18890002 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 18890101  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||    
T  18890102 aaatagaactcatttgtaacattgatatacacattagtgaataagaa 18890148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 30679952 - 30679805
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  30679952 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctatttcccta 30679853  T
Q  169 taaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||||||| | | |||||||||||||||    
T  30679852 taaatagagctcatttgtaacattgataaatacattagtgaataagaa 30679805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 25687717 - 25687571
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  25687717 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactagtttattgggcttaattcataagctactctatttccctat 25687618  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  25687617 aaacagagctcatttgtaacattgatatatagatcagtgaataagaa 25687571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 69 - 200
Target Start/End: Complemental strand, 1913893 - 1913762
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1913893 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactctatttcccta 1913794  T
Q  169 taaatagagctcatttgtaacattgatataca 200  Q
    |||||||||||||||||||||||||| |||||    
T  1913793 taaatagagctcatttgtaacattgagataca 1913762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 1874151 - 1874005
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  1874151 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattatgttattgggcttaattcataggctactctatttccctat 1874052  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||| ||||||||||||||||||| ||||| || ||||||||||||    
T  1874051 aaatatagctcatttgtaacattgagatacacatcagtgaataagaa 1874005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 30673858 - 30673712
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  30673858 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctatttccctat 30673759  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||| |||||||||||||||||| | | |||||||||||||||    
T  30673758 aaatagagttcatttgtaacattgataaatacattagtgaataagaa 30673712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 25697483 - 25697339
Alignment:
Q  72 ttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctataa 171  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  25697483 ttataaatattaatagtggatatccaaatagcaaatgtgttagtgggccatactactagtttattggacttaattcataagctactctatttccctataa 25697384  T
Q  172 atagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  25697383 atagagctcatttgtaacattgatatatagatcagtgaataagaa 25697339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 23187963 - 23188109
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||| ||||| |||||||||||||||||||||||||    
T  23187963 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtggaccatactactagtttattgagcttagttcataagctactctatttccctat 23188062  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  23188063 aaatagagctcatttgtaacattgatagacagataagtgaataagaa 23188109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 911005 - 910860
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| |||||    
T  911005 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctattttcctat 910907  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  910906 aaatagagctcatttgtaacattgatacacagatcagtgaataagaa 910860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 42404642 - 42404786
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  42404642 ttgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttcccta 42404740  T
Q  169 taaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||||  ||||| | |||||||||||||    
T  42404741 taaatagagctcatttgtaacattg--atacacactagtgaataagaa 42404786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 12435505 - 12435362
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  12435505 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 12435407  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||  ||||| | |||||||||||||    
T  12435406 aaatagagctcatttgtaacattg--atacacactagtgaataagaa 12435362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 42411107 - 42411250
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  42411107 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 42411205  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||  ||||| | |||||||||||||    
T  42411206 aaatagagctcatttgtaacattg--atacaaactagtgaataagaa 42411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 23200526 - 23200668
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| |||||||| ||||||| ||||||||    
T  23200526 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactagtttattgggcttagttcataagttactctacttccctat 23200625  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaata 212  Q
    ||||||| ||||||||||||||||||| |||||| || |||||    
T  23200626 aaatagaactcatttgtaacattgatagacagatcagcgaata 23200668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 12659350 - 12659202
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  12659350 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 12659251  T
Q  170 aaatagagctcatttgtaacatt--gatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||| |  |||| ||| |||||||||||||||    
T  12659250 aaatagagctcatttgtaacactgagatacacacattagtgaataagaa 12659202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 16325877 - 16325747
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||| | |||    
T  16325877 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactatattttcttat 16325778  T
Q  170 aaatagagctcatttgtaacattgatataca 200  Q
    ||||||||||||||||||||||||| |||||    
T  16325777 aaatagagctcatttgtaacattgagataca 16325747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 16334921 - 16334791
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||| | |||    
T  16334921 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactatattttcttat 16334822  T
Q  170 aaatagagctcatttgtaacattgatataca 200  Q
    ||||||||||||||||||||||||| |||||    
T  16334821 aaatagagctcatttgtaacattgagataca 16334791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 29333637 - 29333780
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||    
T  29333637 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataacctactctatttccctat 29333735  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||| ||||||||||||||||||  ||||| | |||||||||||||    
T  29333736 aaataaagctcatttgtaacattg--atacacactagtgaataagaa 29333780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 917447 - 917322
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| |||||||| |||||| |||| ||||||||||| |||||| |||||| | ||||||| |||||||||||||||||||||||||    
T  917447 tgttataaatattaatattggatgtctaaatagcaaatatgttagtgggctatactactaggtt-tcgggcttagttcataagctactctatttccctat 917349  T
Q  170 aaatagagctcatttgtaacattgata 196  Q
    |||||||||||||||||||||||||||    
T  917348 aaatagagctcatttgtaacattgata 917322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 12439449 - 12439331
Alignment:
Q  72 ttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctataa 171  Q
    ||||||||||||||||||||||||||||||| ||||  |||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  12439449 ttataaatattaatagtggatgtccaaatagcaaataggtttatgggccatactaataggttattgggcttagttcataagctactctatttccctataa 12439350  T
Q  172 atagagctcatttgtaaca 190  Q
    ||||| |||||||||||||    
T  12439349 atagaactcatttgtaaca 12439331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 190
Target Start/End: Complemental strand, 12429042 - 12428922
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    |||||||||||||||||||||||||||||| || ||||  |||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  12429042 tgttataaatattaatagtggatgtccaaagagcaaataggtttatgggccatactaataggttattgggcttagttcataagctactctatttccctat 12428943  T
Q  170 aaatagagctcatttgtaaca 190  Q
    ||||||| |||||||||||||    
T  12428942 aaatagaactcatttgtaaca 12428922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 12665859 - 12665720
Alignment:
Q  74 ataaatattaatagtggatgt---ccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctata 170  Q
    |||||||||||||||||||||   ||||||| ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||| | ||||    
T  12665859 ataaatattaatagtggatgttgtccaaataataaatgtgttattgggccatactactaggttattgg-cttagttcataagctactctattttcttata 12665761  T
Q  171 aatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||     |||| ||| |||||||||||||||    
T  12665760 aatagagctcatttgta-----gatacacacattagtgaataagaa 12665720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 55325478 - 55325606
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccata---ctattaggttattgggcttaattcataagctactctatttcc 165  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||   ||||||||||||||  |||| ||||||| ||||| |||||||    
T  55325478 ttgttataaatattaataatagatgtccaaatagcaaatgtgttagtgggtcataatactattaggttattgaacttagttcataaactactttatttcc 55325577  T
Q  166 ctataaatagagctcatttgtaacattga 194  Q
    ||||||||| ||||||||||| |||||||    
T  55325578 ctataaataaagctcatttgttacattga 55325606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 192
Target Start/End: Complemental strand, 4393912 - 4393790
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    |||||||||||||||||||||||||| |||||  ||||| ||||  | | ||||||| ||| ||||| || ||||||||||||||||| |||||||||||    
T  4393912 tgttataaatattaatagtggatgtctaaataacaaatgggttaacgagtcatactactagattattaggtttaattcataagctactttatttccctat 4393813  T
Q  170 aaatagagctcatttgtaacatt 192  Q
    ||||| |||||||||||||||||    
T  4393812 aaataaagctcatttgtaacatt 4393790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 33360342 - 33360217
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||| |||| |||| ||||||| |||||||||||| | | ||||||||| ||||||| | ||| || |||||||||||||||| | ||    
T  33360342 ttgttataaatattaagagtgaatgtacaaatagcaaatgtgttagttgactatactattaagttattgagtttagtttataagctactctattttctta 33360243  T
Q  169 taaatagagctcatttgtaacattga 194  Q
    ||||||||||||||| ||||||||||    
T  33360242 taaatagagctcattcgtaacattga 33360217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 192
Target Start/End: Complemental strand, 48305499 - 48305378
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||| ||||||||||||||||| ||| | |||| |||||||||| | ||| |||||| ||||| || ||| ||||||||||||||||||    
T  48305499 tgttataaatattaaaagtggatgtccaaatagcaaacgcgttaatgggccataccactagattattgagcttagtttatatgctactctatttccctat 48305400  T
Q  170 aaatagagctcatttgtaacatt 192  Q
    |||||||| ||| ||||||||||    
T  48305399 aaatagagttca-ttgtaacatt 48305378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 42119895 - 42119802
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctattt 163  Q
    ||||||||||||||||||||||||||||||||| |||||  ||| |||| ||||||| ||| |||||| ||||||| ||||| ||||| |||||    
T  42119895 tgttataaatattaatagtggatgtccaaatagcaaatggattaatgggtcatactactagattattgagcttaatccataaactactttattt 42119802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 29330090 - 29330122
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaata 101  Q
    |||||||||||||||||| ||||||||||||||    
T  29330090 ttgttataaatattaatattggatgtccaaata 29330122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 18540865 - 18540718
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  18540865 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctattttccta 18540766  T
Q  169 taaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18540765 taaatagagctcatttgtaacattgatatacagatcagtgaataagaa 18540718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 18535138 - 18534992
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  18535138 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctattttcctat 18535039  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  18535038 aaatagagctcatttgtaacattgatatacagatcagtgaataagaa 18534992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 70 - 213
Target Start/End: Complemental strand, 31093106 - 31092963
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31093106 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 31093007  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataa 213  Q
    ||||||||||||||||||||||||||||| | || |||||||||    
T  31093006 aaatagagctcatttgtaacattgatatatacatcagtgaataa 31092963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 70 - 213
Target Start/End: Complemental strand, 31099712 - 31099569
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31099712 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 31099613  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataa 213  Q
    ||||||||||||||||||||||||||||| | || |||||||||    
T  31099612 aaatagagctcatttgtaacattgatatatacatcagtgaataa 31099569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 11660177 - 11660323
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  11660177 tgttataaatattaatagtggatgtccaagtaacaaatgtgttagtgggccatactactatgttattgggcttaattcataagctactctatttccctat 11660276  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  11660277 aaatagagctcatttgtaacattgatatacacatcagtgaataagaa 11660323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 200
Target Start/End: Complemental strand, 27347327 - 27347196
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27347327 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttattgagccatactactaggttattgggcttaattcataagctactctatttcccta 27347228  T
Q  169 taaatagagctcatttgtaacattgatataca 200  Q
    |||||||||||||||||||||||||| |||||    
T  27347227 taaatagagctcatttgtaacattgagataca 27347196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 7876090 - 7876237
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||| |||||||| ||||||||| |||||| ||| ||||||||| ||||||||||    
T  7876090 ttgttataaatattaatagtgaatgtccaaataacaaatgtgttagtggaccatactactaggttattaggcttagttcgtaagctactatatttcccta 7876189  T
Q  169 taaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  7876190 taaatagagctcatttgtaacattgagatacacattagtgaataagaa 7876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 11654019 - 11654166
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||  ||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  11654019 ttgttataaatattaatagtggatatccaaatagcaaatgtgttagtggatcatactactatgttattgggcttaattcataagctattctatttcccta 11654118  T
Q  169 taaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||| |||||||||||||||||||||| || | ||||||||||    
T  11654119 taaatagagttcatttgtaacattgatatacacatcaatgaataagaa 11654166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 38984912 - 38985055
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  38984912 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 38985010  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||  ||||| | |||||||||||||    
T  38985011 aaatagagctcatttgtaacattg--atacacactagtgaataagaa 38985055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 38991099 - 38991242
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  38991099 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 38991197  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||  ||||| | |||||||||||||    
T  38991198 aaatagagctcatttgtaacattg--atacacactagtgaataagaa 38991242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 28519275 - 28519398
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  28519275 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 28519373  T
Q  170 aaatagagctcatttgtaacattga 194  Q
    |||||||||||||||||||||||||    
T  28519374 aaatagagctcatttgtaacattga 28519398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 69 - 200
Target Start/End: Complemental strand, 35625412 - 35625281
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||||||| ||||||||||||| ||||| | ||    
T  35625412 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactagattattgggcttagttcataagctactatattttctta 35625313  T
Q  169 taaatagagctcatttgtaacattgatataca 200  Q
    |||||||||||||||||||||||||| |||||    
T  35625312 taaatagagctcatttgtaacattgagataca 35625281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 37356892 - 37356762
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||| | |||    
T  37356892 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactatattttcttat 37356793  T
Q  170 aaatagagctcatttgtaacattgatataca 200  Q
    ||||||||||||||| ||||||||| |||||    
T  37356792 aaatagagctcatttataacattgagataca 37356762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 37365310 - 37365180
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||| |||||||||||||||| ||||||||||||| ||||| | |||    
T  37365310 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattggaccatactactaggttattgggcttagttcataagctactatattttcttat 37365211  T
Q  170 aaatagagctcatttgtaacattgatataca 200  Q
    ||||||||||||||||||||||||| |||||    
T  37365210 aaatagagctcatttgtaacattgagataca 37365180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 38736038 - 38736161
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  38736038 ttgttataaatattaatagtggttgtccaaatagaaaatatgttattgggccatactattaggttattgggcttagttcataagctactctattttctta 38736137  T
Q  169 taaatagagctcatttgtaacatt 192  Q
    ||||||||| ||||||||||||||    
T  38736138 taaatagagttcatttgtaacatt 38736161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 28512812 - 28512933
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||  | ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  28512812 tgttataaatattaatattggatgtccaaa--gcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 28512908  T
Q  170 aaatagagctcatttgtaacattga 194  Q
    |||||||||||||||||||||||||    
T  28512909 aaatagagctcatttgtaacattga 28512933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 39492739 - 39492886
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| ||||  |||  || ||||||||| ||| |||||||||||| |  |||| |||||||||||| |||    
T  39492739 ttgttataaatattaatagtggatgtccaaatagcaaataggtttatgagccatactaatagattattgggcttagtctataaactactctatttctcta 39492838  T
Q  169 taaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||| |  |||||||||| | ||| ||| | || ||||||||||||    
T  39492839 taaataaaattcatttgtaagagtgagatatatatcagtgaataagaa 39492886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 30714374 - 30714228
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30714374 tgttataaatattaatagtggatgtccaaatagcaattgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 30714275  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  30714274 aaatagagctcatttgtaacattgatatacacatcagtgaataagaa 30714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 30722151 - 30722005
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30722151 tgttataaatattaatagtggatgtccaaatagcaattgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 30722052  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  30722051 aaatagagctcatttgtaacattgatatacacatcagtgaataagaa 30722005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 30727760 - 30727613
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  30727760 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactatattttccta 30727661  T
Q  169 taaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
     ||||||||||||||||||||||||||||||| || ||||||||||||    
T  30727660 aaaatagagctcatttgtaacattgatatacacatcagtgaataagaa 30727613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 37204235 - 37204380
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||    
T  37204235 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccctat 37204333  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||    
T  37204334 aaatagagctcatttgtaacattgatacacacatcagtgaataagaa 37204380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 37209712 - 37209857
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||    
T  37209712 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccctat 37209810  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||    
T  37209811 aaatagagctcatttgtaacattgatacacacatcagtgaataagaa 37209857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 21241172 - 21241315
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  21241172 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtggaccatactactaggtt-ttgggcttagttcataagctactctatttccctat 21241270  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||    
T  21241271 aaatagagctcatttgtaacattg--atacagactagtgaataagaa 21241315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 21247676 - 21247819
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  21247676 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtggaccatactactaggtt-ttgggcttagttcataagctactctatttccctat 21247774  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||    
T  21247775 aaatagagctcatttgtaacattg--atacagactagtgaataagaa 21247819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 27679783 - 27679657
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  27679783 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcataagctactctatttccctat 27679685  T
Q  170 aaatagagctcatttgtaacattgatat 197  Q
    |||||||||| |||||||||||||||||    
T  27679684 aaatagagctaatttgtaacattgatat 27679657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 27683566 - 27683439
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||| ||| |||||||| |||||||||||||||    
T  27683566 ttgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggtttagttcataagttactctatttcccta 27683468  T
Q  169 taaatagagctcatttgtaacattgatat 197  Q
    |||||||||||||||||||||||||||||    
T  27683467 taaatagagctcatttgtaacattgatat 27683439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 26196896 - 26197002
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||| ||||||| ||||  |||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  26196896 tgttataaatattaatagtggatgttcaaatagcaaataggtttatgggccatactaataggttattgggcttagttcataagctactctatttccctat 26196995  T
Q  170 aaataga 176  Q
    |||||||    
T  26196996 aaataga 26197002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 24043004 - 24042891
Alignment:
Q  79 tattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctataaatagagc 178  Q
    ||||||| |||| ||||||||||  |||||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  24043004 tattaattgtgggtgtccaaataacaaatgtgttaatgggccataatattagattattgggcttagttcataagctactctatttctctataaatagagc 24042905  T
Q  179 tcatttgtaacatt 192  Q
    |||| |||||||||    
T  24042904 tcatatgtaacatt 24042891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 26197090 - 26196996
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctattt 163  Q
    |||||||||||||||||||||||||||||||||| ||||  |||  | |||||||||| |||||||||||||||| ||||||||||  |||||||    
T  26197090 ttgttataaatattaatagtggatgtccaaatagcaaataggtttataggccatactaataggttattgggcttagttcataagcttttctattt 26196996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 23059113 - 23058967
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23059113 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 23059014  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||    
T  23059013 aaatagagctcatttgtaacattgagacacacattagtgaataagaa 23058967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 35264699 - 35264553
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35264699 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactctatttccctat 35264600  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||    
T  35264599 aaatagagctcatttgtaacattgagatacacatcagtgaataagaa 35264553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 35270440 - 35270294
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35270440 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactctatttccctat 35270341  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||    
T  35270340 aaatagagctcatttgtaacattgagatacacatcagtgaataagaa 35270294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 21171346 - 21171200
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21171346 tgttataaatattaatagtggatgtccaaatggcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 21171247  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||    
T  21171246 aaatagagctcatttgtaacattgagatacacataagtgaataagaa 21171200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 23053538 - 23053392
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  23053538 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgagcttaattcataagctactctatttccctat 23053439  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||    
T  23053438 aaatagagctcatttgtaacattgagacacacattagtgaataagaa 23053392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 39654086 - 39653940
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||| |||    
T  39654086 tgttataaatattaatagtggatgtccaaataacaaatgtgttagtggaccatactactaggttattgggcttaattcataagctactatatttccttat 39653987  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||    
T  39653986 aaatagagctcatttataacattgatatacacatcagtgaataagaa 39653940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 21178209 - 21178061
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactc--tatttccct 167  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||| |||    
T  21178209 tgttataaatattaatagtggatgttcaaatggcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatattttcct 21178110  T
Q  168 ataaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  21178109 ataaatagagctcatttgtaacattgagatacacataagtgaataagaa 21178061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 16675564 - 16675707
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||   ||||||||||||||||||||| |||||||||||    
T  16675564 tgttataaatattaatagtgaatgtccaaatagcaaatgtgttagtgggccatactactaggtt---gggcttaattcataagctactatatttccctat 16675660  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||    
T  16675661 aaatagagctcatttgtaacattgagatacacataagtgaataagaa 16675707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 25365553 - 25365405
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  25365553 tgttataaatattaatagtggatgttcaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcctat 25365454  T
Q  170 aaatagagctcatttgtaacattg--atatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||  | | ||| |||||||||||||||    
T  25365453 aaatagagctcatttgtaacattgtaaaacacacattagtgaataagaa 25365405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 2135891 - 2135850
Alignment:
Q  148 ataagctactctatttccctataaatagagctcatttgtaac 189  Q
    ||||| || ||||||||| |||||||||||||||||||||||    
T  2135891 ataagttaatctatttccatataaatagagctcatttgtaac 2135850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 19437696 - 19437550
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19437696 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctatttccctat 19437597  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||    
T  19437596 aaatagagctcatttgtaacattgagacacacattagtgaataagaa 19437550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 19443271 - 19443125
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  19443271 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttaattcataagctactctattttcctat 19443172  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||    
T  19443171 aaatagagctcatttgtaacattgagacacacattagtgaataagaa 19443125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 25445218 - 25445072
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25445218 tgttataaatattaatagtggatgtccaaatagcaaatgtgttaatgggccatactactaggttattgggcttaattcataagctactctatttccctat 25445119  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||    
T  25445118 aaatagagctcatttgtaacattgatacacacatcagtgaataagaa 25445072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 25454877 - 25454730
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  25454877 ttgttataaatattaatagtgaatgtccaaatagcaaatgtgttagtgggccatactactaggttattgagcttaattcataagctactctatttcccta 25454778  T
Q  169 taaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||||||| ||| || | ||||||||||    
T  25454777 taaatagagctcatttgtaacattgatacacacatcattgaataagaa 25454730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 24053447 - 24053299
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  24053447 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 24053348  T
Q  170 aaatagagctcatttgtaacattgatatac--agattagtgaataagaa 216  Q
    ||||||||||||||||||| ||||| ||||  | |||||||||||||||    
T  24053347 aaatagagctcatttgtaatattgagatacatacattagtgaataagaa 24053299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 43287552 - 43287404
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  43287552 tgttataaacattaatagtagatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 43287453  T
Q  170 aaatagagctcatttgtaacatt--gatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||  |||| ||| |||||||||||||||    
T  43287452 aaatagagctcatttgtaacattgagatacacacattagtgaataagaa 43287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 43293297 - 43293149
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  43293297 tgttataaacattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 43293198  T
Q  170 aaatagagctcatttgtaacatt--gatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||  |||| ||| || ||||||||||||    
T  43293197 aaatagagctcatttgtaacattgggatacacacatcagtgaataagaa 43293149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 24056782 - 24056635
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    |||||||||||||||||||||||||||| |||| |||||||||| ||| |||||||| ||||||||||| |||| ||||||||||||||||||| | |||    
T  24056782 tgttataaatattaatagtggatgtccagatagcaaatgtgttattgg-ccatactactaggttattggacttagttcataagctactctattttcttat 24056684  T
Q  170 aaatagagctcatttgtaacatt--gatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||  |||| ||| |||||||||||||||    
T  24056683 aaatagagctcatttgtaacattgagatacacacattagtgaataagaa 24056635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 31437151 - 31437273
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    |||||||||||||||||||||||||||||| |  ||||| |||| ||| ||||| || |  ||||||||||||| ||||||||||||||||||| |||||    
T  31437151 tgttataaatattaatagtggatgtccaaacaacaaatgagttaatggaccataatactgtgttattgggcttagttcataagctactctattttcctat 31437250  T
Q  170 aaatagagctcatttgtaacatt 192  Q
    ||||| || ||||||||||||||    
T  31437251 aaataaagttcatttgtaacatt 31437273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 31433045 - 31433167
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||  |||| |||  ||| | | ||| |||||| ||||| |||||||| || |||||||||||||    
T  31433045 tgttataaatattaatagtggatgtccaaatagcaaattagttaatggagcatgcaactagtttattgagcttagttcataagatattctatttccctat 31433144  T
Q  170 aaatagagctcatttgtaacatt 192  Q
    |||||  | ||||||||||||||    
T  31433145 aaataatgttcatttgtaacatt 31433167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 8872274 - 8872362
Alignment:
Q  104 aaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctataaatagagctcatttgtaacatt 192  Q
    ||||| |||| | |||||||||||| | |||||||||||| |  ||| |||||| ||||||||||||||||||| ||||||||||||||    
T  8872274 aaatgggttaataggccatactatttgattattgggcttagtctataggctactatatttccctataaatagagttcatttgtaacatt 8872362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 2982338 - 2982192
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  2982338 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggctatactactaggttattgggcttagttcataagctactctatttccctat 2982239  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  2982238 aaatagagctcatttgtaacattgatatacacataagtgaataagaa 2982192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 2978394 - 2978248
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  2978394 tgttataaatattaatagtggatgtccaaataacaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctattttcctat 2978295  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||    
T  2978294 aaatagagctcatttgtaacattgatatacacatcagtgaataagaa 2978248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 200
Target Start/End: Complemental strand, 49491381 - 49491250
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||    
T  49491381 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgagcttaattcataggctactctatttctcta 49491282  T
Q  169 taaatagagctcatttgtaacattgatataca 200  Q
    |||||||||||||||||||||||||| |||||    
T  49491281 taaatagagctcatttgtaacattgagataca 49491250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 49486883 - 49486753
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||    
T  49486883 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgagcttaattcataggctactctatttctctat 49486784  T
Q  170 aaatagagctcatttgtaacattgatataca 200  Q
    ||||||||||||||||||||||||| |||||    
T  49486783 aaatagagctcatttgtaacattgagataca 49486753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 15752658 - 15752510
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  15752658 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 15752559  T
Q  170 aaatagagctcatttgtaacatt--gatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||  |||| ||| |||||||||||||||    
T  15752558 aaatagagctcatttgtaacattgagatacacacattagtgaataagaa 15752510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 216
Target Start/End: Complemental strand, 15758451 - 15758303
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  15758451 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 15758352  T
Q  170 aaatagagctcatttgtaacatt--gatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||  |||| ||| |||||||||||||||    
T  15758351 aaatagagctcatttgtaacattgagatacacacattagtgaataagaa 15758303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 21453160 - 21453308
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  21453160 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 21453259  T
Q  170 aaatagagctcatttgtaacatt--gatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||  |||| ||| || ||||||||||||    
T  21453260 aaatagagctcatttgtaacattgggatacacacatcagtgaataagaa 21453308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 21458334 - 21458482
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  21458334 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttcttat 21458433  T
Q  170 aaatagagctcatttgtaacatt--gatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||  |||| ||| || ||||||||||||    
T  21458434 aaatagagctcatttgtaacattgggatacacacatcagtgaataagaa 21458482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 21473103 - 21473234
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||| ||||||||||||||||||| | ||    
T  21473103 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactattagcttattggacttagttcataagctactctattttctta 21473202  T
Q  169 taaatagagctcatttgtaacattgatataca 200  Q
    |||||||||||||||||||||||||| |||||    
T  21473203 taaatagagctcatttgtaacattgagataca 21473234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 21877163 - 21877287
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | ||    
T  21877163 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactctattttctta 21877262  T
Q  169 taaatagagctcatttgtaacattg 193  Q
    ||||| |||||||||||||||||||    
T  21877263 taaatggagctcatttgtaacattg 21877287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 21883424 - 21883547
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    |||||||||||||||||| |||||||||||||| |||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  21883424 tgttataaatattaatagcggatgtccaaatagcaaatgtgttattgagccatactactaggttattgggcttagttcataagctactctattttcttat 21883523  T
Q  170 aaatagagctcatttgtaacattg 193  Q
    ||||||||||||||||||||||||    
T  21883524 aaatagagctcatttgtaacattg 21883547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 21477492 - 21477621
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||||||||| ||||||||||||| |||||   |||    
T  21477492 tgttataaatattaatagtggatgtccaaatagcaa-tgtgttattgggccatactactaggttattgggcttagttcataagctactttatttttttat 21477590  T
Q  170 aaatagagctcatttgtaacattgatataca 200  Q
    |||||| |||||||||||||||||| |||||    
T  21477591 aaatagggctcatttgtaacattgagataca 21477621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 29176543 - 29176690
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  29176543 ttgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggtcatactactaggttattgggcttagttcataagctactctatttcccta 29176642  T
Q  169 taaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||    
T  29176643 taaatagagctcatttgtaacattgatacacacattagtgaataagaa 29176690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 29185532 - 29185669
Alignment:
Q  79 tattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctataaatagagc 178  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29185532 tattaatattggatgtccaaatagaaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctatttccctataaatagagc 29185631  T
Q  179 tcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  29185632 tcatttgtaacattgatacacacattagtgaataagaa 29185669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 22822537 - 22822682
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||    
T  22822537 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccctat 22822635  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||    
T  22822636 aaatagagctcatttgtaacattgatacacacatcagtgaataagaa 22822682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 22826840 - 22826985
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||    
T  22826840 tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatactactaggtt-ttgggcttagttcattagctactctatttccctat 22826938  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||    
T  22826939 aaatagagctcatttgtaacattgatacacacatcagtgaataagaa 22826985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 8242541 - 8242687
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| || ||| ||||| ||||||||||||||||||||||||||||||||    
T  8242541 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggtcatattactagattattaggcttaattcataagctactctatttccctat 8242640  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||||  ||||  | ||||||||||||    
T  8242641 aaatagagctcatttgtaacattgagttacatctaagtgaataagaa 8242687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 8248110 - 8248256
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||| |||||||||||||||||||||||||| |||||    
T  8248110 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatattactagattattaggcttaattcataagctactctattttcctat 8248209  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    |||||||||||||||||||||||||  ||||  | ||||||||||||    
T  8248210 aaatagagctcatttgtaacattgagttacatctaagtgaataagaa 8248256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 346687 - 346563
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| || ||||||||| |||||||||| ||||| ||||||||||||||||||| | ||    
T  346687 ttgttataaatattaatagcggatgtccaaatagcaaatgtgttattgagccatactactaggttattgagcttagttcataagctactctattttctta 346588  T
Q  169 taaatagagctcatttgtaacattg 193  Q
    |||||||||||||||||||||||||    
T  346587 taaatagagctcatttgtaacattg 346563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 193
Target Start/End: Complemental strand, 340452 - 340329
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    |||||||||||||||||| |||||||||||||  |||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  340452 tgttataaatattaatagcggatgtccaaataacaaatgtgttattgagccatactactaggttattgggcttagttcataagctactctattttcttat 340353  T
Q  170 aaatagagctcatttgtaacattg 193  Q
    ||||||||||||||||||||||||    
T  340352 aaatagagctcatttgtaacattg 340329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 25830547 - 25830424
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||  |||| ||||| || ||| ||| || ||||||||| | ||||||||| | |||||||||||    
T  25830547 tgttataaatattaatagtggatgtccaaatagcaaattggttaatgggctat-ctactagattgttgggcttagtccataagctattatatttccctat 25830449  T
Q  170 aaatagagctcatttgtaacattga 194  Q
    ||||||||||| |||||| ||||||    
T  25830448 aaatagagctcctttgtagcattga 25830424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 2068882 - 2068782
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| | ||| |||||| ||| | |||||||||| | ||||||||| | |||||||||||    
T  2068882 tgttataaatattaatagtggatgtccaaatagcaaatgagttaataggctatactaatagatgattgggcttagtccataagctattatatttccctat 2068783  T
Q  170 a 170  Q
    |    
T  2068782 a 2068782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 21989826 - 21989710
Alignment:
Q  72 ttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctataa 171  Q
    ||||||||||||  ||| ||||||||||||  ||||| | ||  ||| ||||||||||  |||||| | ||| | ||||||||||||| ||| ||| |||    
T  21989826 ttataaatattataagtagatgtccaaataacaaatgagctaacgggtcatactattatattattgtgtttagtccataagctactctgttttcctgtaa 21989727  T
Q  172 atagagctcatttgtaa 188  Q
     ||| ||||||||||||    
T  21989726 ctagggctcatttgtaa 21989710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 111875 - 112005
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  111875 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattaggttattgggcttaattcataggctactctatttccctat 111974  T
Q  170 aaatagagctcatttgtaacattgatataca 200  Q
    |||||||| |||||||||||||||| |||||    
T  111975 aaatagagttcatttgtaacattgagataca 112005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 106062 - 106122
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattag 130  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||||| ||||||||||    
T  106062 tgttataaatattaacagcggatgtccaaatagcaaatgtgttagtgggctatactattag 106122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 14025 - 14171
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  14025 tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgagccatactactaggttattgagcttagttcataagctactctatttccctat 14124  T
Q  170 aaatagagctcatttgtaacattgatatacagattagtgaataagaa 216  Q
    ||||||||||||||||||||||||| | ||| || ||||||||||||    
T  14125 aaatagagctcatttgtaacattgagagacacatcagtgaataagaa 14171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 18738572 - 18738697
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  18738572 ttgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactaggttattgggcttagttcataagctactctatttaccta 18738671  T
Q  169 taaatagagctcatttgtaacattga 194  Q
    ||||||||||||||||||||||||||    
T  18738672 taaatagagctcatttgtaacattga 18738697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 196
Target Start/End: Original strand, 23427482 - 23427607
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||| |||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  23427482 tgttataaatattaatatttgatgtccaaatagcaaatgtgttagtggaccatactactaggtt-ttgggcttagttcataagctactctatttccctat 23427580  T
Q  170 aaatagagctcatttgtaacattgata 196  Q
    |||||||||||||||||||||||||||    
T  23427581 aaatagagctcatttgtaacattgata 23427607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 23421635 - 23421761
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||| | |||||| |||||| ||||||||| |||||||| |||||||||||||||    
T  23421635 ttgttataaatattaatatttgatgtccaaatagcaaatgtgttagtggactatactactaggtt-ttgggcttagttcataagttactctatttcccta 23421733  T
Q  169 taaatagagctcatttgtaacattgata 196  Q
    ||||||||||||||||||||||||||||    
T  23421734 taaatagagctcatttgtaacattgata 23421761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 200
Target Start/End: Complemental strand, 33661053 - 33660922
Alignment:
Q  69 ttgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttcccta 168  Q
    |||||||||||||||||||||||||||||||||| ||||  |||  ||||||||| || |||||||||||||||| ||||||||||||||||||| | ||    
T  33661053 ttgttataaatattaatagtggatgtccaaatagcaaataggtttatgggccatattactaggttattgggcttagttcataagctactctattttctta 33660954  T
Q  169 taaatagagctcatttgtaacattgatataca 200  Q
    ||||||||| |||||||||||||||| |||||    
T  33660953 taaatagagttcatttgtaacattgagataca 33660922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 57939 - 58069
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||| | |||    
T  57939 tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactactaggttattgggcttagttcataagctactatattttcttat 58038  T
Q  170 aaatagagctcatttgtaacattgatataca 200  Q
    ||||||||||||||||||||||||| |||||    
T  58039 aaatagagctcatttgtaacattgagataca 58069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 9323 - 9446
Alignment:
Q  70 tgttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctat 169  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  9323 tgttataaatattaatagtggatgtccaaatagcaaatgtattattgggccatactactaggttattgggcttagttcataagctactctattttcttat 9422  T
Q  170 aaatagagctcatttgtaacattg 193  Q
    ||||||||||||||||||||||||    
T  9423 aaatagagctcatttgtaacattg 9446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 6435 - 6317
Alignment:
Q  72 ttataaatattaatagtggatgtccaaatagtaaatgtgttagtgggccatactattaggttattgggcttaattcataagctactctatttccctataa 171  Q
    ||||||||||||| ||||||||||||||||| ||||   ||  ||||| |||| | |||||||||||||||| ||||||||||||||||||||||| |||    
T  6435 ttataaatattaacagtggatgtccaaatagcaaataaatttatgggctatacgaataggttattgggcttagttcataagctactctatttccctgtaa 6336  T
Q  172 atagagctcatttgtaaca 190  Q
    ||||| |||| ||||||||    
T  6335 atagaactcaattgtaaca 6317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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