View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0663_low_36 (Length: 251)

Name: NF0663_low_36
Description: NF0663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0663_low_36
NF0663_low_36
[»] chr2 (25 HSPs)
chr2 (1-234)||(16521030-16521264)
chr2 (1-32)||(3720438-3720469)
chr2 (1-32)||(9531623-9531654)
chr2 (1-32)||(12520085-12520116)
chr2 (1-32)||(39709224-39709255)
chr2 (1-32)||(43573153-43573184)
chr2 (1-31)||(227418-227448)
chr2 (1-31)||(451671-451701)
chr2 (1-31)||(3635346-3635376)
chr2 (1-31)||(4807824-4807854)
chr2 (1-31)||(8181009-8181039)
chr2 (1-31)||(12474950-12474980)
chr2 (1-31)||(17670697-17670727)
chr2 (1-31)||(25834907-25834937)
chr2 (1-31)||(28367352-28367382)
chr2 (1-31)||(28508907-28508937)
chr2 (1-31)||(30306261-30306291)
chr2 (1-31)||(38328393-38328423)
chr2 (1-31)||(38430113-38430143)
chr2 (1-31)||(41763066-41763096)
chr2 (2-31)||(3866301-3866330)
chr2 (3-32)||(9996651-9996680)
chr2 (2-31)||(36183680-36183709)
chr2 (2-30)||(19225011-19225039)
chr2 (3-31)||(39592414-39592442)
[»] chr1 (26 HSPs)
chr1 (1-35)||(52561612-52561646)
chr1 (1-32)||(2544821-2544852)
chr1 (1-32)||(4590555-4590586)
chr1 (1-32)||(21769734-21769765)
chr1 (1-32)||(22175373-22175404)
chr1 (1-32)||(26299296-26299327)
chr1 (1-32)||(28090717-28090748)
chr1 (1-32)||(32404549-32404580)
chr1 (1-32)||(37462899-37462930)
chr1 (1-32)||(41560457-41560488)
chr1 (1-32)||(43481821-43481852)
chr1 (1-32)||(44941799-44941830)
chr1 (1-31)||(1210974-1211004)
chr1 (1-31)||(4029351-4029381)
chr1 (1-31)||(4318868-4318898)
chr1 (1-31)||(25979254-25979284)
chr1 (1-31)||(28533696-28533726)
chr1 (1-31)||(29577481-29577511)
chr1 (1-31)||(30202153-30202183)
chr1 (1-31)||(32082779-32082809)
chr1 (1-31)||(37311778-37311808)
chr1 (1-31)||(41165511-41165541)
chr1 (1-31)||(46423239-46423269)
chr1 (1-31)||(49347416-49347446)
chr1 (1-31)||(52921309-52921339)
chr1 (1-30)||(38869112-38869141)
[»] chr8 (14 HSPs)
chr8 (1-32)||(490563-490594)
chr8 (1-32)||(1928610-1928641)
chr8 (1-32)||(27556325-27556356)
chr8 (1-32)||(30689963-30689994)
chr8 (1-32)||(32931188-32931219)
chr8 (1-32)||(45419463-45419494)
chr8 (1-31)||(11523746-11523776)
chr8 (1-31)||(12491161-12491191)
chr8 (1-31)||(14742105-14742135)
chr8 (1-31)||(25473426-25473456)
chr8 (1-31)||(36545378-36545408)
chr8 (1-31)||(36565264-36565294)
chr8 (1-31)||(44529454-44529484)
chr8 (1-30)||(36394971-36395000)
[»] chr7 (32 HSPs)
chr7 (1-32)||(2885745-2885776)
chr7 (1-32)||(6263487-6263518)
chr7 (1-32)||(7273328-7273359)
chr7 (1-32)||(27649008-27649039)
chr7 (1-32)||(28708609-28708640)
chr7 (1-32)||(30814148-30814179)
chr7 (1-32)||(31681043-31681074)
chr7 (1-32)||(40979951-40979982)
chr7 (1-32)||(42187669-42187700)
chr7 (1-32)||(42969926-42969957)
chr7 (1-31)||(6375097-6375127)
chr7 (1-31)||(11594189-11594219)
chr7 (1-31)||(12841298-12841328)
chr7 (2-32)||(25891116-25891146)
chr7 (1-31)||(28208351-28208381)
chr7 (1-31)||(29650613-29650643)
chr7 (1-31)||(31005434-31005464)
chr7 (1-31)||(31682625-31682655)
chr7 (1-31)||(31869125-31869155)
chr7 (2-32)||(33103154-33103184)
chr7 (1-31)||(34035177-34035207)
chr7 (1-31)||(35906224-35906254)
chr7 (1-31)||(36652221-36652251)
chr7 (1-31)||(37618174-37618204)
chr7 (1-31)||(39906395-39906425)
chr7 (1-31)||(40630663-40630693)
chr7 (1-31)||(43281903-43281933)
chr7 (1-31)||(45836505-45836535)
chr7 (1-31)||(46355879-46355909)
chr7 (3-32)||(20525077-20525106)
chr7 (3-32)||(47852315-47852344)
chr7 (4-32)||(40415235-40415263)
[»] chr6 (7 HSPs)
chr6 (1-32)||(12890803-12890834)
chr6 (1-31)||(3206482-3206512)
chr6 (1-31)||(9706999-9707029)
chr6 (1-31)||(28085605-28085635)
chr6 (1-31)||(31819060-31819090)
chr6 (1-31)||(34934853-34934883)
chr6 (3-32)||(31818759-31818788)
[»] chr5 (18 HSPs)
chr5 (1-32)||(5558369-5558400)
chr5 (1-32)||(18855835-18855866)
chr5 (1-32)||(26884712-26884743)
chr5 (1-32)||(27386568-27386599)
chr5 (1-32)||(28985311-28985342)
chr5 (1-32)||(36551374-36551405)
chr5 (1-31)||(408517-408547)
chr5 (1-31)||(1275493-1275523)
chr5 (1-31)||(2915519-2915549)
chr5 (1-31)||(3302073-3302103)
chr5 (1-31)||(4496613-4496643)
chr5 (1-31)||(13561409-13561439)
chr5 (1-31)||(20457002-20457032)
chr5 (1-31)||(29816611-29816641)
chr5 (1-31)||(30213804-30213834)
chr5 (1-31)||(38685196-38685226)
chr5 (1-30)||(7678707-7678736)
chr5 (1-29)||(1287602-1287630)
[»] chr4 (22 HSPs)
chr4 (1-32)||(7544554-7544585)
chr4 (1-32)||(7947165-7947196)
chr4 (1-32)||(15661895-15661926)
chr4 (1-32)||(30634129-30634160)
chr4 (1-32)||(35690499-35690530)
chr4 (1-32)||(50862859-50862890)
chr4 (1-32)||(55007974-55008005)
chr4 (1-31)||(436458-436488)
chr4 (1-31)||(4441082-4441112)
chr4 (1-31)||(19969410-19969440)
chr4 (1-31)||(21528517-21528547)
chr4 (1-31)||(27450203-27450233)
chr4 (1-31)||(28351788-28351818)
chr4 (1-31)||(31959837-31959867)
chr4 (1-31)||(32479267-32479297)
chr4 (1-31)||(49939757-49939787)
chr4 (1-31)||(50238638-50238668)
chr4 (1-31)||(50238724-50238754)
chr4 (1-31)||(52569538-52569568)
chr4 (1-30)||(40018212-40018241)
chr4 (1-30)||(45209228-45209257)
chr4 (2-30)||(46236719-46236747)
[»] chr3 (20 HSPs)
chr3 (1-32)||(24778632-24778663)
chr3 (1-32)||(32170633-32170664)
chr3 (1-32)||(38060942-38060973)
chr3 (1-32)||(41529989-41530020)
chr3 (1-32)||(46148256-46148287)
chr3 (1-32)||(48508463-48508494)
chr3 (1-32)||(52927871-52927902)
chr3 (1-31)||(5169061-5169091)
chr3 (1-31)||(7278693-7278723)
chr3 (1-31)||(12096728-12096758)
chr3 (1-31)||(21862764-21862794)
chr3 (1-31)||(31566184-31566214)
chr3 (2-32)||(38850349-38850379)
chr3 (1-31)||(40273228-40273258)
chr3 (2-32)||(49888415-49888445)
chr3 (1-31)||(52139029-52139059)
chr3 (1-31)||(53519809-53519839)
chr3 (1-30)||(659755-659784)
chr3 (3-32)||(42510041-42510070)
chr3 (1-33)||(34253687-34253719)
[»] scaffold1318 (1 HSPs)
scaffold1318 (1-31)||(560-590)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-31)||(28912-28942)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-31)||(31697-31727)
[»] scaffold0113 (1 HSPs)
scaffold0113 (2-31)||(11573-11602)


Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 16521030 - 16521264
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatttcgaactctatacagcttaaagaaaatagcattgaacatgatttacagcactaggatgtcattttatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16521030 cactaagtggggtcggctacatggatcaaatttcgaactctatacagcttaaagaaaatagcattgaacatgatttacagcactaggatgtcgttttatt 16521129  T
Q  101 cactta-cttggctctaaacaagtcatgtttgagctgaatactagcatccccatgttaaactcagcaatgtgtaggtaaaactgttctcttggagaattg 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16521130 cacttaacttggctctaaacaagtcatgtttgagctgaatactagcatccccatgttaaactcagcaatgtgtaggtaaaactgctctcttggagaattg 16521229  T
Q  200 tcatataaaaattgtttaatacttgatgatgtcca 234  Q
    |||||||||||||||||||||||||||||| ||||    
T  16521230 tcatataaaaattgtttaatacttgatgatatcca 16521264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3720438 - 3720469
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  3720438 cactaagtggggtcggctacatggatcaaatt 3720469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9531623 - 9531654
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  9531623 cactaagtggggtcggctacatggatcaaatt 9531654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 12520085 - 12520116
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  12520085 cactaagtggggtcggctacatggatcaaatt 12520116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 39709224 - 39709255
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  39709224 cactaagtggggtcggctacatggatcaaatt 39709255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43573153 - 43573184
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  43573153 cactaagtggggtcggctacatggatcaaatt 43573184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 227448 - 227418
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  227448 cactaagtggggtcggctacatggatcaaat 227418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 451671 - 451701
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  451671 cactaagtggggtcggctacatggatcaaat 451701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 3635346 - 3635376
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  3635346 cactaagtggggtcggctacatggatcaaat 3635376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 4807854 - 4807824
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  4807854 cactaagtggggtcggctacatggatcaaat 4807824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 8181039 - 8181009
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  8181039 cactaagtggggtcggctacatggatcaaat 8181009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 12474950 - 12474980
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  12474950 cactaagtggggtcggctacatggatcaaat 12474980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 17670727 - 17670697
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  17670727 cactaagtggggtcggctacatggatcaaat 17670697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 25834937 - 25834907
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  25834937 cactaagtggggtcggctacatggatcaaat 25834907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 28367382 - 28367352
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  28367382 cactaagtggggtcggctacatggatcaaat 28367352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 28508937 - 28508907
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  28508937 cactaagtggggtcggctacatggatcaaat 28508907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30306291 - 30306261
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  30306291 cactaagtggggtcggctacatggatcaaat 30306261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 38328393 - 38328423
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  38328393 cactaagtggggtcggctacatggatcaaat 38328423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 38430143 - 38430113
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  38430143 cactaagtggggtcggctacatggatcaaat 38430113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 41763066 - 41763096
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  41763066 cactaagtggggtcggctacatggatcaaat 41763096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 3866330 - 3866301
Alignment:
Q  2 actaagtggggtcggctacatggatcaaat 31  Q
    ||||||||||||||||||||||||||||||    
T  3866330 actaagtggggtcggctacatggatcaaat 3866301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 9996651 - 9996680
Alignment:
Q  3 ctaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||    
T  9996651 ctaagtggggtcggctacatggatcaaatt 9996680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 36183709 - 36183680
Alignment:
Q  2 actaagtggggtcggctacatggatcaaat 31  Q
    ||||||||||||||||||||||||||||||    
T  36183709 actaagtggggtcggctacatggatcaaat 36183680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 19225039 - 19225011
Alignment:
Q  2 actaagtggggtcggctacatggatcaaa 30  Q
    |||||||||||||||||||||||||||||    
T  19225039 actaagtggggtcggctacatggatcaaa 19225011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 39592414 - 39592442
Alignment:
Q  3 ctaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||    
T  39592414 ctaagtggggtcggctacatggatcaaat 39592442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 52561612 - 52561646
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatttcg 35  Q
    |||||||||||||||||||||||||||||||||||    
T  52561612 cactaagtggggtcggctacatggatcaaatttcg 52561646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2544852 - 2544821
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  2544852 cactaagtggggtcggctacatggatcaaatt 2544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4590555 - 4590586
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  4590555 cactaagtggggtcggctacatggatcaaatt 4590586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 21769734 - 21769765
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  21769734 cactaagtggggtcggctacatggatcaaatt 21769765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 22175404 - 22175373
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  22175404 cactaagtggggtcggctacatggatcaaatt 22175373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26299327 - 26299296
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  26299327 cactaagtggggtcggctacatggatcaaatt 26299296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28090717 - 28090748
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28090717 cactaagtggggtcggctacatggatcaaatt 28090748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 32404549 - 32404580
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  32404549 cactaagtggggtcggctacatggatcaaatt 32404580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37462899 - 37462930
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  37462899 cactaagtggggtcggctacatggatcaaatt 37462930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 41560488 - 41560457
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  41560488 cactaagtggggtcggctacatggatcaaatt 41560457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43481821 - 43481852
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  43481821 cactaagtggggtcggctacatggatcaaatt 43481852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 44941799 - 44941830
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  44941799 cactaagtggggtcggctacatggatcaaatt 44941830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1211004 - 1210974
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  1211004 cactaagtggggtcggctacatggatcaaat 1210974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 4029381 - 4029351
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  4029381 cactaagtggggtcggctacatggatcaaat 4029351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 4318868 - 4318898
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  4318868 cactaagtggggtcggctacatggatcaaat 4318898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 25979254 - 25979284
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  25979254 cactaagtggggtcggctacatggatcaaat 25979284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 28533726 - 28533696
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  28533726 cactaagtggggtcggctacatggatcaaat 28533696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 29577511 - 29577481
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  29577511 cactaagtggggtcggctacatggatcaaat 29577481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 30202153 - 30202183
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  30202153 cactaagtggggtcggctacatggatcaaat 30202183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 32082779 - 32082809
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  32082779 cactaagtggggtcggctacatggatcaaat 32082809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 37311778 - 37311808
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  37311778 cactaagtggggtcggctacatggatcaaat 37311808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 41165541 - 41165511
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  41165541 cactaagtggggtcggctacatggatcaaat 41165511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 46423239 - 46423269
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  46423239 cactaagtggggtcggctacatggatcaaat 46423269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 49347416 - 49347446
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  49347416 cactaagtggggtcggctacatggatcaaat 49347446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 52921339 - 52921309
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  52921339 cactaagtggggtcggctacatggatcaaat 52921309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38869141 - 38869112
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  38869141 cactaagtggggtcggctacatggatcaaa 38869112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 490594 - 490563
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  490594 cactaagtggggtcggctacatggatcaaatt 490563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1928610 - 1928641
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  1928610 cactaagtggggtcggctacatggatcaaatt 1928641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 27556325 - 27556356
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  27556325 cactaagtggggtcggctacatggatcaaatt 27556356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 30689994 - 30689963
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  30689994 cactaagtggggtcggctacatggatcaaatt 30689963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32931219 - 32931188
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  32931219 cactaagtggggtcggctacatggatcaaatt 32931188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 45419494 - 45419463
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  45419494 cactaagtggggtcggctacatggatcaaatt 45419463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 11523746 - 11523776
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  11523746 cactaagtggggtcggctacatggatcaaat 11523776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 12491161 - 12491191
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  12491161 cactaagtggggtcggctacatggatcaaat 12491191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 14742105 - 14742135
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  14742105 cactaagtggggtcggctacatggatcaaat 14742135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 25473426 - 25473456
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  25473426 cactaagtggggtcggctacatggatcaaat 25473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 36545408 - 36545378
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  36545408 cactaagtggggtcggctacatggatcaaat 36545378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 36565264 - 36565294
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  36565264 cactaagtggggtcggctacatggatcaaat 36565294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 44529484 - 44529454
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  44529484 cactaagtggggtcggctacatggatcaaat 44529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 36394971 - 36395000
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  36394971 cactaagtggggtcggctacatggatcaaa 36395000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2885745 - 2885776
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  2885745 cactaagtggggtcggctacatggatcaaatt 2885776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6263518 - 6263487
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  6263518 cactaagtggggtcggctacatggatcaaatt 6263487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 7273359 - 7273328
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  7273359 cactaagtggggtcggctacatggatcaaatt 7273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 27649039 - 27649008
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  27649039 cactaagtggggtcggctacatggatcaaatt 27649008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28708640 - 28708609
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28708640 cactaagtggggtcggctacatggatcaaatt 28708609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 30814148 - 30814179
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  30814148 cactaagtggggtcggctacatggatcaaatt 30814179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 31681043 - 31681074
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  31681043 cactaagtggggtcggctacatggatcaaatt 31681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 40979951 - 40979982
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  40979951 cactaagtggggtcggctacatggatcaaatt 40979982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42187700 - 42187669
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  42187700 cactaagtggggtcggctacatggatcaaatt 42187669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42969957 - 42969926
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  42969957 cactaagtggggtcggctacatggatcaaatt 42969926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 6375127 - 6375097
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  6375127 cactaagtggggtcggctacatggatcaaat 6375097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 11594219 - 11594189
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  11594219 cactaagtggggtcggctacatggatcaaat 11594189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 12841298 - 12841328
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  12841298 cactaagtggggtcggctacatggatcaaat 12841328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 25891146 - 25891116
Alignment:
Q  2 actaagtggggtcggctacatggatcaaatt 32  Q
    |||||||||||||||||||||||||||||||    
T  25891146 actaagtggggtcggctacatggatcaaatt 25891116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 28208351 - 28208381
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  28208351 cactaagtggggtcggctacatggatcaaat 28208381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 29650643 - 29650613
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  29650643 cactaagtggggtcggctacatggatcaaat 29650613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 31005464 - 31005434
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  31005464 cactaagtggggtcggctacatggatcaaat 31005434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 31682625 - 31682655
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  31682625 cactaagtggggtcggctacatggatcaaat 31682655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 31869125 - 31869155
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  31869125 cactaagtggggtcggctacatggatcaaat 31869155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 33103184 - 33103154
Alignment:
Q  2 actaagtggggtcggctacatggatcaaatt 32  Q
    |||||||||||||||||||||||||||||||    
T  33103184 actaagtggggtcggctacatggatcaaatt 33103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 34035177 - 34035207
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  34035177 cactaagtggggtcggctacatggatcaaat 34035207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 35906224 - 35906254
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  35906224 cactaagtggggtcggctacatggatcaaat 35906254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 36652251 - 36652221
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  36652251 cactaagtggggtcggctacatggatcaaat 36652221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 37618204 - 37618174
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  37618204 cactaagtggggtcggctacatggatcaaat 37618174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 39906395 - 39906425
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  39906395 cactaagtggggtcggctacatggatcaaat 39906425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 40630693 - 40630663
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  40630693 cactaagtggggtcggctacatggatcaaat 40630663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 43281933 - 43281903
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  43281933 cactaagtggggtcggctacatggatcaaat 43281903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 45836505 - 45836535
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  45836505 cactaagtggggtcggctacatggatcaaat 45836535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 46355879 - 46355909
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  46355879 cactaagtggggtcggctacatggatcaaat 46355909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 20525077 - 20525106
Alignment:
Q  3 ctaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||    
T  20525077 ctaagtggggtcggctacatggatcaaatt 20525106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 47852344 - 47852315
Alignment:
Q  3 ctaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||    
T  47852344 ctaagtggggtcggctacatggatcaaatt 47852315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 40415263 - 40415235
Alignment:
Q  4 taagtggggtcggctacatggatcaaatt 32  Q
    |||||||||||||||||||||||||||||    
T  40415263 taagtggggtcggctacatggatcaaatt 40415235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12890834 - 12890803
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  12890834 cactaagtggggtcggctacatggatcaaatt 12890803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 3206482 - 3206512
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  3206482 cactaagtggggtcggctacatggatcaaat 3206512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 9707029 - 9706999
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  9707029 cactaagtggggtcggctacatggatcaaat 9706999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 28085635 - 28085605
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  28085635 cactaagtggggtcggctacatggatcaaat 28085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 31819090 - 31819060
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  31819090 cactaagtggggtcggctacatggatcaaat 31819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 34934853 - 34934883
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  34934853 cactaagtggggtcggctacatggatcaaat 34934883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 31818788 - 31818759
Alignment:
Q  3 ctaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||    
T  31818788 ctaagtggggtcggctacatggatcaaatt 31818759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 5558400 - 5558369
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  5558400 cactaagtggggtcggctacatggatcaaatt 5558369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18855866 - 18855835
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  18855866 cactaagtggggtcggctacatggatcaaatt 18855835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 26884712 - 26884743
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  26884712 cactaagtggggtcggctacatggatcaaatt 26884743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 27386599 - 27386568
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  27386599 cactaagtggggtcggctacatggatcaaatt 27386568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28985342 - 28985311
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28985342 cactaagtggggtcggctacatggatcaaatt 28985311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 36551405 - 36551374
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  36551405 cactaagtggggtcggctacatggatcaaatt 36551374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 408517 - 408547
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  408517 cactaagtggggtcggctacatggatcaaat 408547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1275523 - 1275493
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  1275523 cactaagtggggtcggctacatggatcaaat 1275493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 2915519 - 2915549
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  2915519 cactaagtggggtcggctacatggatcaaat 2915549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 3302103 - 3302073
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  3302103 cactaagtggggtcggctacatggatcaaat 3302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 4496643 - 4496613
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  4496643 cactaagtggggtcggctacatggatcaaat 4496613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 13561409 - 13561439
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  13561409 cactaagtggggtcggctacatggatcaaat 13561439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 20457032 - 20457002
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  20457032 cactaagtggggtcggctacatggatcaaat 20457002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 29816641 - 29816611
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  29816641 cactaagtggggtcggctacatggatcaaat 29816611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30213834 - 30213804
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  30213834 cactaagtggggtcggctacatggatcaaat 30213804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 38685226 - 38685196
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  38685226 cactaagtggggtcggctacatggatcaaat 38685196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7678736 - 7678707
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  7678736 cactaagtggggtcggctacatggatcaaa 7678707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 1287602 - 1287630
Alignment:
Q  1 cactaagtggggtcggctacatggatcaa 29  Q
    |||||||||||||||||||||||||||||    
T  1287602 cactaagtggggtcggctacatggatcaa 1287630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7544554 - 7544585
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  7544554 cactaagtggggtcggctacatggatcaaatt 7544585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 7947196 - 7947165
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  7947196 cactaagtggggtcggctacatggatcaaatt 7947165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 15661895 - 15661926
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  15661895 cactaagtggggtcggctacatggatcaaatt 15661926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 30634129 - 30634160
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  30634129 cactaagtggggtcggctacatggatcaaatt 30634160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 35690530 - 35690499
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  35690530 cactaagtggggtcggctacatggatcaaatt 35690499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 50862890 - 50862859
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  50862890 cactaagtggggtcggctacatggatcaaatt 50862859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 55008005 - 55007974
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  55008005 cactaagtggggtcggctacatggatcaaatt 55007974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 436488 - 436458
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  436488 cactaagtggggtcggctacatggatcaaat 436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 4441112 - 4441082
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  4441112 cactaagtggggtcggctacatggatcaaat 4441082  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 19969440 - 19969410
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  19969440 cactaagtggggtcggctacatggatcaaat 19969410  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 21528547 - 21528517
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  21528547 cactaagtggggtcggctacatggatcaaat 21528517  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 27450203 - 27450233
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  27450203 cactaagtggggtcggctacatggatcaaat 27450233  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 28351818 - 28351788
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  28351818 cactaagtggggtcggctacatggatcaaat 28351788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 31959837 - 31959867
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  31959837 cactaagtggggtcggctacatggatcaaat 31959867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 32479297 - 32479267
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  32479297 cactaagtggggtcggctacatggatcaaat 32479267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 49939757 - 49939787
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  49939757 cactaagtggggtcggctacatggatcaaat 49939787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 50238638 - 50238668
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  50238638 cactaagtggggtcggctacatggatcaaat 50238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 50238724 - 50238754
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  50238724 cactaagtggggtcggctacatggatcaaat 50238754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 52569538 - 52569568
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  52569538 cactaagtggggtcggctacatggatcaaat 52569568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 40018212 - 40018241
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  40018212 cactaagtggggtcggctacatggatcaaa 40018241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 45209228 - 45209257
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  45209228 cactaagtggggtcggctacatggatcaaa 45209257  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 46236747 - 46236719
Alignment:
Q  2 actaagtggggtcggctacatggatcaaa 30  Q
    |||||||||||||||||||||||||||||    
T  46236747 actaagtggggtcggctacatggatcaaa 46236719  T

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Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 24778632 - 24778663
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  24778632 cactaagtggggtcggctacatggatcaaatt 24778663  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32170664 - 32170633
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  32170664 cactaagtggggtcggctacatggatcaaatt 32170633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 38060973 - 38060942
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  38060973 cactaagtggggtcggctacatggatcaaatt 38060942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 41530020 - 41529989
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  41530020 cactaagtggggtcggctacatggatcaaatt 41529989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 46148287 - 46148256
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  46148287 cactaagtggggtcggctacatggatcaaatt 46148256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 48508494 - 48508463
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  48508494 cactaagtggggtcggctacatggatcaaatt 48508463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 52927871 - 52927902
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  52927871 cactaagtggggtcggctacatggatcaaatt 52927902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 5169091 - 5169061
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  5169091 cactaagtggggtcggctacatggatcaaat 5169061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 7278723 - 7278693
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  7278723 cactaagtggggtcggctacatggatcaaat 7278693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 12096728 - 12096758
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  12096728 cactaagtggggtcggctacatggatcaaat 12096758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 21862764 - 21862794
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  21862764 cactaagtggggtcggctacatggatcaaat 21862794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 31566184 - 31566214
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  31566184 cactaagtggggtcggctacatggatcaaat 31566214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 38850379 - 38850349
Alignment:
Q  2 actaagtggggtcggctacatggatcaaatt 32  Q
    |||||||||||||||||||||||||||||||    
T  38850379 actaagtggggtcggctacatggatcaaatt 38850349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 40273228 - 40273258
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  40273228 cactaagtggggtcggctacatggatcaaat 40273258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 49888445 - 49888415
Alignment:
Q  2 actaagtggggtcggctacatggatcaaatt 32  Q
    |||||||||||||||||||||||||||||||    
T  49888445 actaagtggggtcggctacatggatcaaatt 49888415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 52139059 - 52139029
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  52139059 cactaagtggggtcggctacatggatcaaat 52139029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 53519839 - 53519809
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  53519839 cactaagtggggtcggctacatggatcaaat 53519809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 659784 - 659755
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  659784 cactaagtggggtcggctacatggatcaaa 659755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 42510041 - 42510070
Alignment:
Q  3 ctaagtggggtcggctacatggatcaaatt 32  Q
    ||||||||||||||||||||||||||||||    
T  42510041 ctaagtggggtcggctacatggatcaaatt 42510070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34253719 - 34253687
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaattt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  34253719 cactaaatggggtcggctacatggatcaaattt 34253687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 590 - 560
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  590 cactaagtggggtcggctacatggatcaaat 560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 28912 - 28942
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  28912 cactaagtggggtcggctacatggatcaaat 28942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 31727 - 31697
Alignment:
Q  1 cactaagtggggtcggctacatggatcaaat 31  Q
    |||||||||||||||||||||||||||||||    
T  31727 cactaagtggggtcggctacatggatcaaat 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 31
Target Start/End: Original strand, 11573 - 11602
Alignment:
Q  2 actaagtggggtcggctacatggatcaaat 31  Q
    ||||||||||||||||||||||||||||||    
T  11573 actaagtggggtcggctacatggatcaaat 11602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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