View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0664_low_13 (Length: 313)

Name: NF0664_low_13
Description: NF0664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0664_low_13
NF0664_low_13
[»] chr7 (37 HSPs)
chr7 (1-298)||(18873230-18873527)
chr7 (8-298)||(14422861-14423151)
chr7 (1-183)||(15168045-15168227)
chr7 (1-182)||(10895795-10895976)
chr7 (7-191)||(12709839-12710023)
chr7 (7-191)||(13122910-13123094)
chr7 (8-183)||(16009454-16009628)
chr7 (3-191)||(13743581-13743768)
chr7 (9-191)||(12590639-12590818)
chr7 (73-191)||(13007374-13007491)
chr7 (18-183)||(16677180-16677347)
chr7 (18-183)||(17651416-17651583)
chr7 (226-298)||(19617457-19617528)
chr7 (213-298)||(14113417-14113500)
chr7 (226-295)||(4281212-4281281)
chr7 (131-183)||(11382874-11382926)
chr7 (131-183)||(11389351-11389403)
chr7 (131-183)||(20311055-20311107)
chr7 (131-183)||(21230963-21231015)
chr7 (251-294)||(11304303-11304346)
chr7 (251-294)||(23664018-23664061)
chr7 (251-294)||(29797665-29797708)
chr7 (251-294)||(29801484-29801527)
chr7 (123-286)||(13679485-13679646)
chr7 (226-286)||(36305145-36305203)
chr7 (246-297)||(19152935-19152985)
chr7 (246-297)||(20752334-20752384)
chr7 (246-297)||(41780943-41780993)
chr7 (132-183)||(2971254-2971305)
chr7 (132-183)||(11311059-11311110)
chr7 (132-183)||(20906465-20906516)
chr7 (130-181)||(46625961-46626012)
chr7 (226-286)||(13664946-13665005)
chr7 (151-191)||(831629-831669)
chr7 (151-191)||(1196809-1196849)
chr7 (226-277)||(11382780-11382831)
chr7 (151-191)||(34958578-34958618)
[»] chr5 (20 HSPs)
chr5 (1-297)||(22751011-22751307)
chr5 (8-294)||(28369946-28370232)
chr5 (8-294)||(19512263-19512549)
chr5 (8-191)||(38144532-38144714)
chr5 (122-298)||(23111088-23111264)
chr5 (73-196)||(23528573-23528695)
chr5 (226-294)||(22006782-22006849)
chr5 (122-183)||(18407947-18408008)
chr5 (131-183)||(22438751-22438803)
chr5 (251-298)||(22337647-22337694)
chr5 (251-298)||(22341185-22341232)
chr5 (251-294)||(9777219-9777262)
chr5 (246-297)||(23528758-23528809)
chr5 (226-294)||(37803967-37804034)
chr5 (256-298)||(38144424-38144466)
chr5 (161-294)||(41875486-41875620)
chr5 (132-183)||(19236900-19236951)
chr5 (246-297)||(21900899-21900949)
chr5 (134-183)||(22461158-22461207)
chr5 (134-183)||(22467782-22467831)
[»] scaffold0456 (2 HSPs)
scaffold0456 (104-298)||(8049-8243)
scaffold0456 (104-294)||(904-1094)
[»] scaffold0026 (5 HSPs)
scaffold0026 (2-191)||(11846-12035)
scaffold0026 (8-183)||(111563-111737)
scaffold0026 (246-287)||(121323-121364)
scaffold0026 (238-286)||(67298-67346)
scaffold0026 (246-297)||(143750-143800)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-191)||(111751-111942)
[»] chr6 (33 HSPs)
chr6 (8-298)||(23839075-23839365)
chr6 (1-183)||(23057808-23057990)
chr6 (2-191)||(29614142-29614331)
chr6 (8-191)||(18800314-18800497)
chr6 (8-183)||(10986184-10986359)
chr6 (8-183)||(4477734-4477909)
chr6 (54-191)||(930091-930227)
chr6 (73-191)||(12168305-12168422)
chr6 (73-191)||(19287214-19287331)
chr6 (73-191)||(19785865-19785982)
chr6 (73-191)||(19878398-19878515)
chr6 (73-191)||(19884174-19884291)
chr6 (104-183)||(34639990-34640069)
chr6 (130-294)||(25397172-25397336)
chr6 (104-183)||(34646664-34646743)
chr6 (8-183)||(21565215-21565390)
chr6 (73-183)||(25469708-25469816)
chr6 (226-298)||(9187589-9187660)
chr6 (251-298)||(2286656-2286703)
chr6 (159-294)||(12943152-12943288)
chr6 (246-298)||(23058057-23058109)
chr6 (251-294)||(29483324-29483367)
chr6 (246-287)||(8767115-8767156)
chr6 (246-287)||(14615340-14615381)
chr6 (131-179)||(24512851-24512899)
chr6 (134-183)||(9187498-9187547)
chr6 (130-183)||(25348486-25348539)
chr6 (130-183)||(25598643-25598696)
chr6 (265-298)||(933550-933583)
chr6 (130-183)||(2286770-2286823)
chr6 (246-286)||(18787161-18787202)
chr6 (130-183)||(19471338-19471391)
chr6 (122-183)||(31252413-31252474)
[»] chr3 (36 HSPs)
chr3 (1-183)||(14762761-14762943)
chr3 (1-183)||(20247792-20247974)
chr3 (1-183)||(38310803-38310985)
chr3 (8-294)||(9534205-9534491)
chr3 (8-183)||(24192832-24193008)
chr3 (8-183)||(23370509-23370684)
chr3 (73-183)||(24933832-24933941)
chr3 (105-191)||(41455093-41455178)
chr3 (47-191)||(16801463-16801606)
chr3 (122-294)||(17240407-17240577)
chr3 (226-298)||(8579134-8579206)
chr3 (226-298)||(14085693-14085764)
chr3 (226-298)||(49400693-49400764)
chr3 (226-298)||(14091094-14091165)
chr3 (8-183)||(55499105-55499281)
chr3 (125-286)||(18929239-18929398)
chr3 (251-298)||(16801147-16801194)
chr3 (251-298)||(20247678-20247725)
chr3 (251-300)||(38310687-38310736)
chr3 (251-294)||(54521876-54521919)
chr3 (226-286)||(31689679-31689737)
chr3 (226-286)||(31944489-31944547)
chr3 (256-294)||(24193082-24193120)
chr3 (132-183)||(13302244-13302295)
chr3 (132-183)||(13323791-13323842)
chr3 (246-294)||(14288082-14288129)
chr3 (132-183)||(12033448-12033499)
chr3 (132-183)||(13312900-13312951)
chr3 (132-183)||(17131732-17131783)
chr3 (246-297)||(35985770-35985820)
chr3 (132-183)||(51301589-51301640)
chr3 (73-183)||(10389447-10389557)
chr3 (73-183)||(10414536-10414646)
chr3 (73-183)||(10421206-10421316)
chr3 (246-286)||(12203360-12203401)
chr3 (130-183)||(16801027-16801080)
[»] chr1 (21 HSPs)
chr1 (8-298)||(20436913-20437202)
chr1 (122-298)||(32651563-32651738)
chr1 (73-191)||(41111977-41112094)
chr1 (226-298)||(21543218-21543289)
chr1 (122-287)||(18712790-18712954)
chr1 (131-294)||(19663410-19663572)
chr1 (246-298)||(42094850-42094902)
chr1 (246-297)||(20850115-20850166)
chr1 (131-286)||(11158093-11158246)
chr1 (246-287)||(29553504-29553545)
chr1 (130-183)||(10811786-10811839)
chr1 (130-183)||(20805320-20805373)
chr1 (246-286)||(19777713-19777753)
chr1 (226-286)||(21736197-21736256)
chr1 (246-297)||(5381715-5381765)
chr1 (132-183)||(20851136-20851187)
chr1 (132-183)||(20857763-20857814)
chr1 (132-183)||(21706276-21706327)
chr1 (132-183)||(21710818-21710869)
chr1 (268-298)||(16373102-16373132)
chr1 (246-286)||(11140164-11140205)
[»] chr2 (24 HSPs)
chr2 (8-294)||(6483595-6483882)
chr2 (8-294)||(6487062-6487349)
chr2 (8-183)||(19661457-19661631)
chr2 (18-191)||(26583715-26583886)
chr2 (8-183)||(23878885-23879059)
chr2 (226-298)||(6743190-6743261)
chr2 (226-298)||(43694562-43694633)
chr2 (8-183)||(23089058-23089233)
chr2 (8-183)||(23101466-23101641)
chr2 (122-287)||(23265133-23265298)
chr2 (122-287)||(23280201-23280366)
chr2 (131-299)||(9242961-9243129)
chr2 (73-183)||(5706027-5706137)
chr2 (125-183)||(21908353-21908411)
chr2 (251-294)||(10683828-10683871)
chr2 (251-294)||(20262273-20262316)
chr2 (226-275)||(201783-201831)
chr2 (246-287)||(24944419-24944460)
chr2 (226-286)||(21908453-21908512)
chr2 (130-183)||(24661576-24661629)
chr2 (250-297)||(20649170-20649217)
chr2 (132-183)||(10577-10628)
chr2 (132-183)||(25180933-25180984)
chr2 (83-183)||(26885133-26885233)
[»] scaffold1773 (1 HSPs)
scaffold1773 (7-191)||(1054-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (7-191)||(50055-50238)
[»] scaffold0924 (1 HSPs)
scaffold0924 (7-191)||(746-931)
[»] chr4 (18 HSPs)
chr4 (2-191)||(8045828-8046016)
chr4 (2-191)||(11847978-11848173)
chr4 (226-297)||(16157883-16157953)
chr4 (131-298)||(18213768-18213935)
chr4 (73-183)||(53483646-53483756)
chr4 (251-298)||(2757449-2757496)
chr4 (131-183)||(15408139-15408191)
chr4 (251-294)||(15535235-15535278)
chr4 (251-294)||(49546840-49546883)
chr4 (246-286)||(14063796-14063836)
chr4 (130-183)||(8834895-8834948)
chr4 (130-183)||(13888641-13888694)
chr4 (132-183)||(14486661-14486712)
chr4 (130-181)||(22724691-22724742)
chr4 (130-183)||(15245215-15245268)
chr4 (130-181)||(15308120-15308171)
chr4 (132-181)||(27906266-27906315)
chr4 (151-191)||(15747552-15747592)
[»] scaffold0025 (2 HSPs)
scaffold0025 (8-183)||(14399-14575)
scaffold0025 (256-294)||(14287-14325)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-191)||(11219-11401)
[»] chr8 (19 HSPs)
chr8 (8-183)||(44477500-44477674)
chr8 (8-183)||(44492658-44492832)
chr8 (7-191)||(23866490-23866674)
chr8 (8-183)||(8727736-8727911)
chr8 (130-298)||(18614271-18614437)
chr8 (122-298)||(23481941-23482117)
chr8 (73-183)||(17054533-17054642)
chr8 (226-298)||(23826302-23826373)
chr8 (8-95)||(27940946-27941032)
chr8 (226-286)||(21283095-21283153)
chr8 (255-298)||(8727623-8727666)
chr8 (130-183)||(39364919-39364972)
chr8 (246-286)||(21321078-21321118)
chr8 (246-286)||(21325676-21325716)
chr8 (132-183)||(29643389-29643440)
chr8 (131-183)||(14056567-14056619)
chr8 (131-183)||(25111976-25112028)
chr8 (132-183)||(24320674-24320725)
chr8 (130-183)||(21931696-21931749)
[»] scaffold0058 (1 HSPs)
scaffold0058 (3-191)||(164-350)
[»] scaffold0553 (1 HSPs)
scaffold0553 (8-183)||(10199-10374)
[»] scaffold0544 (1 HSPs)
scaffold0544 (8-183)||(1529-1704)
[»] scaffold0117 (2 HSPs)
scaffold0117 (2-191)||(1893-2081)
scaffold0117 (2-191)||(8570-8758)
[»] scaffold0090 (1 HSPs)
scaffold0090 (2-191)||(18039-18229)
[»] scaffold0004 (1 HSPs)
scaffold0004 (122-298)||(116887-117062)
[»] scaffold0154 (2 HSPs)
scaffold0154 (47-191)||(30772-30917)
scaffold0154 (233-294)||(17479-17539)
[»] scaffold0796 (2 HSPs)
scaffold0796 (73-191)||(1728-1845)
scaffold0796 (73-191)||(5751-5868)
[»] scaffold0476 (1 HSPs)
scaffold0476 (8-183)||(3296-3472)
[»] scaffold0146 (1 HSPs)
scaffold0146 (122-294)||(13623-13793)
[»] scaffold0106 (1 HSPs)
scaffold0106 (226-298)||(39563-39634)
[»] scaffold0104 (2 HSPs)
scaffold0104 (226-298)||(12928-12999)
scaffold0104 (246-298)||(40694-40746)
[»] scaffold0077 (1 HSPs)
scaffold0077 (8-183)||(3625-3800)
[»] scaffold0076 (2 HSPs)
scaffold0076 (226-298)||(29089-29160)
scaffold0076 (226-298)||(34490-34561)
[»] scaffold0028 (3 HSPs)
scaffold0028 (226-298)||(45923-45994)
scaffold0028 (226-298)||(51327-51398)
scaffold0028 (134-282)||(69749-69896)
[»] scaffold0011 (1 HSPs)
scaffold0011 (226-298)||(173505-173576)
[»] scaffold0053 (1 HSPs)
scaffold0053 (153-294)||(78984-79125)
[»] scaffold0337 (1 HSPs)
scaffold0337 (131-298)||(8658-8825)
[»] scaffold0610 (1 HSPs)
scaffold0610 (172-287)||(6540-6653)
[»] scaffold0019 (3 HSPs)
scaffold0019 (213-300)||(34524-34609)
scaffold0019 (131-183)||(135473-135525)
scaffold0019 (246-297)||(13697-13747)
[»] scaffold0020 (1 HSPs)
scaffold0020 (122-287)||(101827-101992)
[»] scaffold0129 (1 HSPs)
scaffold0129 (75-183)||(45278-45386)
[»] scaffold0124 (1 HSPs)
scaffold0124 (131-294)||(34169-34331)
[»] scaffold0222 (1 HSPs)
scaffold0222 (122-287)||(16811-16975)
[»] scaffold0461 (1 HSPs)
scaffold0461 (122-183)||(11-72)
[»] scaffold0310 (1 HSPs)
scaffold0310 (131-183)||(17643-17695)
[»] scaffold0107 (2 HSPs)
scaffold0107 (131-183)||(40535-40587)
scaffold0107 (246-289)||(40439-40482)
[»] scaffold0139 (2 HSPs)
scaffold0139 (131-243)||(14940-15052)
scaffold0139 (246-294)||(1964-2012)
[»] scaffold0317 (1 HSPs)
scaffold0317 (123-286)||(1378-1539)
[»] scaffold0235 (1 HSPs)
scaffold0235 (133-183)||(22596-22646)
[»] scaffold0706 (1 HSPs)
scaffold0706 (246-287)||(2422-2463)
[»] scaffold0138 (1 HSPs)
scaffold0138 (130-183)||(12296-12349)
[»] scaffold0506 (1 HSPs)
scaffold0506 (246-286)||(9296-9336)
[»] scaffold0490 (1 HSPs)
scaffold0490 (246-297)||(5984-6034)
[»] scaffold0180 (1 HSPs)
scaffold0180 (246-297)||(13513-13563)
[»] scaffold0096 (2 HSPs)
scaffold0096 (130-183)||(39510-39563)
scaffold0096 (246-286)||(3952-3993)
[»] scaffold0015 (1 HSPs)
scaffold0015 (246-287)||(170868-170909)
[»] scaffold0815 (1 HSPs)
scaffold0815 (135-183)||(1453-1501)
[»] scaffold0266 (2 HSPs)
scaffold0266 (246-298)||(24083-24134)
scaffold0266 (246-298)||(13528-13579)
[»] scaffold1318 (1 HSPs)
scaffold1318 (132-183)||(1916-1967)
[»] scaffold0583 (1 HSPs)
scaffold0583 (246-297)||(5513-5563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (132-183)||(9336-9387)
[»] scaffold0309 (1 HSPs)
scaffold0309 (246-297)||(9239-9289)
[»] scaffold0127 (1 HSPs)
scaffold0127 (132-183)||(10239-10290)
[»] scaffold0046 (1 HSPs)
scaffold0046 (246-297)||(71645-71695)
[»] scaffold0023 (1 HSPs)
scaffold0023 (132-183)||(135438-135489)
[»] scaffold0001 (1 HSPs)
scaffold0001 (132-183)||(493032-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (98-191)||(680-774)
[»] scaffold0669 (1 HSPs)
scaffold0669 (246-298)||(796-848)
[»] scaffold0609 (1 HSPs)
scaffold0609 (122-183)||(5861-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (130-183)||(2631-2684)
[»] scaffold0178 (1 HSPs)
scaffold0178 (246-298)||(26520-26572)
[»] scaffold0790 (1 HSPs)
scaffold0790 (261-297)||(5579-5615)
[»] scaffold0042 (1 HSPs)
scaffold0042 (250-294)||(53943-53986)


Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 18873230 - 18873527
Alignment:
Q  1 gcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  18873230 gcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 18873329  T
Q  101 aatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaac 200  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||    
T  18873330 aatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaac 18873429  T
Q  201 gcacaacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    |||||||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873430 gcacaacggccggattctctgactatacttgttcttctctccccctttttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 18873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 8 - 298
Target Start/End: Original strand, 14422861 - 14423151
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  14422861 agattaagttttcattctaaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttat 14422959  T
Q  108 tttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcac 204  Q
     |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    ||| |||  |||    
T  14422960 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttagatgaacaaaaacac 14423059  T
Q  205 aacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||| | | ||||||||||||  ||||||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14423060 aacaatcggattctctgactccacttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 14423151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 15168045 - 15168227
Alignment:
Q  1 gcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  15168045 gcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 15168144  T
Q  101 aatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15168145 aatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacc 15168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 10895976 - 10895795
Alignment:
Q  1 gcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |    
T  10895976 gcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccac 10895878  T
Q  101 aatttattttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttac 182  Q
    ||||||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10895877 aatttatcttccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 12710023 - 12709839
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt 105  Q
    ||||||||||||  |||||||||||||||||||||   ||||||||| |||||||||||| ||| ||||| ||||||||| |||||||||||||||||||    
T  12710023 aagattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt 12709924  T
Q  106 attttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  12709923 attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 12709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 13123094 - 13122910
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt 105  Q
    ||||||||||||  |||||||||||||||||||||   ||||||||| |||||||||||| ||| ||||| ||||||||| |||||||||||||||||||    
T  13123094 aagattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt 13122995  T
Q  106 attttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13122994 attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 13122910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 16009454 - 16009628
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| ||||| |||||| ||||| ||||||||||||| ||||| |||||| ||||||||    
T  16009454 agattaagttttcattctaaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccttaacccacaatttat 16009552  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16009553 cttccaaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 16009628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 13743581 - 13743768
Alignment:
Q  3 aacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaa 102  Q
    |||| ||||||||| |||| ||||||||  ||| ||||||  |||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||    
T  13743581 aacatagattaagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaa 13743680  T
Q  103 tttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13743681 tttattttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 13743768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 12590818 - 12590639
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttatt 108  Q
    ||||||| ||||||||| ||||||| ||| ||||  || |||||  ||| |||| || |  || ||||||||||||| ||||||||||  |||  |||||    
T  12590818 gattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatattatt 12590721  T
Q  109 ttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12590720 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 12590639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 13007374 - 13007491
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13007374 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 13007472  T
Q  173 tcacccttaccatagtttt 191  Q
    ||||||||||| |||||||    
T  13007473 tcacccttaccttagtttt 13007491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 16677180 - 16677347
Alignment:
Q  18 ttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaa 116  Q
    |||||||||||||| |  ||||||   | |||||| ||||||||| | || | | ||| ||||||||| ||||||||||||| ||||| || ||||||||    
T  16677180 ttcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaa 16677279  T
Q  117 -ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16677280 actatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 16677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 17651416 - 17651583
Alignment:
Q  18 ttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaa 116  Q
    |||||||||||||| |  ||||||   | |||||| ||||||||| | || | | ||| ||||||||| ||||||||||||| ||||| || ||||||||    
T  17651416 ttcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaa 17651515  T
Q  117 -ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17651516 actatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 17651583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 19617457 - 19617528
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19617457 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 19617528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 14113417 - 14113500
Alignment:
Q  213 gattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||  ||||||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14113417 gattctctgactccacttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 14113500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 4281212 - 4281281
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgt-aaaactgcttctg 295  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||    
T  4281212 tacttgttcttctctcccc-ttattcttggttttctctcccaaaacttgtttcacgtaaaaactgcttctg 4281281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 11382926 - 11382874
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacc 11382874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 11389403 - 11389351
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacc 11389351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 20311107 - 20311055
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttacc 20311055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 21231015 - 21230963
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 21230963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 11304303 - 11304346
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11304303 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 11304346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 23664061 - 23664018
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23664061 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 23664018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 29797665 - 29797708
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29797665 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 29797708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 29801484 - 29801527
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29801484 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 29801527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 286
Target Start/End: Original strand, 13679485 - 13679646
Alignment:
Q  123 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-tg 221  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||| || ||| |||| |||| |||  | | | |||  || ||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta-tttcagaa-aaacacacggcaatcggatgatcttg 13679582  T
Q  222 actatacttgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaa 286  Q
     || |||||||||||||||  || | |||||||| |||||||||||||||||||||||||||||||    
T  13679583 gctctacttgttcttctct--ccttagttcttggtttttctctcccaaaacttgtttcacgtaaaa 13679646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 286
Target Start/End: Complemental strand, 36305203 - 36305145
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    |||||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||    
T  36305203 tacttgttcttctccccc--ttattcttggttttctctcccaaaacttgtttcacgtaaaa 36305145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 19152935 - 19152985
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  19152935 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 19152985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 20752334 - 20752384
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  20752334 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 20752384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 41780993 - 41780943
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  41780993 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 41780943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 2971254 - 2971305
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttacc 2971305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 11311059 - 11311110
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||| ||||||| || | ||| ||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacc 11311110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 20906516 - 20906465
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 20906465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 46625961 - 46626012
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 181  Q
    ||||||||| ||||||||| ||||| || |||||||| ||||||||||||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcaccctta 46626012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 13664946 - 13665005
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttct-ctcccaaaacttgtttcacgtaaaa 286  Q
    |||||||||||||||||   | |||||||||||| | |||||||||||||||||||||||||    
T  13664946 tacttgttcttctctcct--tagttcttggtttttttctcccaaaacttgtttcacgtaaaa 13665005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 831669 - 831629
Alignment:
Q  151 ttatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagtttt 831629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 1196849 - 1196809
Alignment:
Q  151 ttatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagtttt 1196809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 11382831 - 11382780
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgttt 277  Q
    ||||||||||||||||||| ||| |||||||| | ||||||||||||||||||    
T  11382831 tacttgttcttctctcccc-ttgctcttggttctcctctcccaaaacttgttt 11382780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 34958578 - 34958618
Alignment:
Q  151 ttatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagtttt 34958618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 22751011 - 22751307
Alignment:
Q  1 gcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  22751011 gcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 22751110  T
Q  101 aatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaac 200  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||    
T  22751111 aatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaac 22751210  T
Q  201 gcacaacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  22751211 gcacaacgaccggattctctgactatacttgttcttctctcccccttgttattggttttctctcctaaaacttgtttcacgtaaaactgcttctgac 22751307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 8 - 294
Target Start/End: Complemental strand, 28370232 - 28369946
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  ||||||  ||||||||| ||||| |||||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  28370232 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttat 28370134  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag--aaacgcaca 205  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||  ||| |||||    
T  28370133 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta-attcagaagaaaaatgcaca 28370035  T
Q  206 acgaccagattctc-tgactatacttgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||| ||||||| | || || |||||| |||||||||||  |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  28370034 acgatcagattcccttggctctacttgctcttctctccc--ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 28369946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 8 - 294
Target Start/End: Original strand, 19512263 - 19512549
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  ||||||  ||||||||| ||||| |||||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  19512263 agattaagttttcattctaaacattacgttacaatagaattaacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttat 19512361  T
Q  108 tttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcaca 205  Q
     |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||| ||| |||||    
T  19512362 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta-attcagaagaaaatgcaca 19512460  T
Q  206 acgaccagattctc-tgactatacttgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||| ||||||| | || || |||||| |||||||||||  |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  19512461 acgatcagattcccttggctctacttgctcttctctccc--ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 19512549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 191
Target Start/End: Complemental strand, 38144714 - 38144532
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  38144714 agattaagttttcattctaaacattacattacaatagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttat 38144616  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38144615 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 38144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 23111264 - 23111088
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctc 219  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| || |||    ||| ||| ||||||| | | |||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctc 23111165  T
Q  220 tgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    |||||  ||||||||||| | |||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  23111164 tgactccacttgttcttcccaccc--ttgttcttgattttctctcccaaaccttgtttcacgtaaaactgcttctgacc 23111088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 73 - 196
Target Start/End: Original strand, 23528573 - 23528695
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23528573 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 23528671  T
Q  173 tcacccttaccatagttttagaag 196  Q
    ||||||||||| ||||||||||||    
T  23528672 tcacccttaccttagttttagaag 23528695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 22006849 - 22006782
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22006849 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgttttacgtaaaactgcttct 22006782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 18408008 - 18407947
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacc 18407947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 22438803 - 22438751
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttacc 22438751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 22337647 - 22337694
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22337647 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 22337694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 22341185 - 22341232
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22341185 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 22341232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 9777219 - 9777262
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9777219 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 9777262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 23528758 - 23528809
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  23528758 ttgttcttggttttctctcctaaaactggtttcacgtaaaactgcttctgac 23528809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 37804034 - 37803967
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggtttt-ctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||||| |||||||||||  |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  37804034 tacttgctcttctctccc--ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 37803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 38144466 - 38144424
Alignment:
Q  256 ttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  38144466 ttttctctcccaaaacttgtttcacgtaaaactgcttttgacc 38144424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 294
Target Start/End: Complemental strand, 41875620 - 41875486
Alignment:
Q  161 tgagagatagtctcacccttaccatagttttagaagaaac--gcacaacgaccagattctct-gactatacttgttcttctctccccgttgttcttggtt 257  Q
    ||||||| ||||||||||||||| || ||  ||||||||   ||||||||| | ||||| || | || |||||| |||||||||||  |||| |||||||    
T  41875620 tgagagagagtctcacccttaccttaattc-agaagaaaaatgcacaacgatcggattcccttggctctacttgctcttctctccc--ttgtccttggtt 41875524  T
Q  258 tt-ctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    || ||||||||||||||||||||||| ||||| |||||    
T  41875523 tttctctcccaaaacttgtttcacgtgaaacttcttct 41875486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 19236900 - 19236951
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 19236951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 21900949 - 21900899
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||||| ||||||||    
T  21900949 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactacttctgac 21900899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 22461158 - 22461207
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttacc 22461207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 22467782 - 22467831
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttacc 22467831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 163; Significance: 5e-87; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 104 - 298
Target Start/End: Original strand, 8049 - 8243
Alignment:
Q  104 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgca 203  Q
    |||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 8148  T
Q  204 caacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8149 caacgaccggattctctgactctacttgttcttctctcccccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 8243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 104 - 294
Target Start/End: Original strand, 904 - 1094
Alignment:
Q  104 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgca 203  Q
    |||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 1003  T
Q  204 caacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1004 caacgaccggattctctgactatacttgttcttctctcccccttgttcttggttttctctcccaaaacttgtttcacgtaaaactacttct 1094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 158; Significance: 4e-84; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 12035 - 11846
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctca 101  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  12035 caacaaagattaagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctca 11936  T
Q  102 atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11935 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 111563 - 111737
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  111563 agattaagttttcattctaaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttat 111661  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111662 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 111737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 121364 - 121323
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 287  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  121364 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 121323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 67298 - 67346
Alignment:
Q  238 tctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  67298 tctcccccttgttcttggttttctcccccaaaacttgtttcacgtaaaa 67346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 143750 - 143800
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| | || ||||||||||||||    
T  143750 ttgttcttggtttt-tctcccaaaacttgttttatgtgaaactgcttctgac 143800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 111751 - 111942
Alignment:
Q  1 gcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  111751 gcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 111850  T
Q  101 aatttattttccaaaactaagcaattaggtcaa-ttttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  111851 aatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 7e-83; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 8 - 298
Target Start/End: Original strand, 23839075 - 23839365
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||||| |||||||  ||||||||| ||||| |||||| | ||||| ||||||||||| |||||||||||||||||||||    
T  23839075 agattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttat 23839173  T
Q  108 tttccaaa-actaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcac 204  Q
     ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    ||| ||| ||||    
T  23839174 cttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcac 23839273  T
Q  205 aacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||| | | ||||||||||||  ||||||||||| | |||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  23839274 aacaatcggattctctgactccacttgttcttcccaccc--ttgttcttgattttctctcccaaaacatgtttcacgtaaaactgcttctgacc 23839365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 23057808 - 23057990
Alignment:
Q  1 gcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  23057808 gcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 23057907  T
Q  101 aatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  23057908 aatttatcttccaaaactatgcaattaggtcaattttcaggaattatagattatgattatcgagagatagtctcacccttacc 23057990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 29614331 - 29614142
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctca 101  Q
    |||||||||||||||||||||||| ||||||  || ||||| ||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  29614331 caacaaagattaagttttcattctaaacattcaat-acaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctca 29614233  T
Q  102 atttatttt-ccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    ||||||||| |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29614232 atttatttttccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 29614142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 8 - 191
Target Start/End: Original strand, 18800314 - 18800497
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatt-ta 106  Q
    |||||||| ||||||| ||||||| | |||||||  ||||||||| ||||||||| || |||||| |||||||||||| |||||||||||||||||| ||    
T  18800314 agattaagatttcattttgaacatcacattacaacagaattaacatgatcattactca-ttccctccagaatcatcatcaaaccctaaccctcaattcta 18800412  T
Q  107 ttttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  18800413 ttttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagtttt 18800497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 10986359 - 10986184
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||||| |||||||  ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  10986359 agattaagttttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttat 10986261  T
Q  108 tttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  10986260 cttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttacc 10986184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 4477734 - 4477909
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  |||||| || ||||| |||||| ||||| ||||||||||||| |||||||||||| ||||||||    
T  4477734 agattaagttttcattctaaacattacattacaacagaattagcatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttat 4477832  T
Q  108 tttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477833 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 4477909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 930227 - 930091
Alignment:
Q  54 gatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatta 153  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||    
T  930227 gatcattaccca-ttcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagatta 930129  T
Q  154 tgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||||||||||||||||||| |||||||    
T  930128 tgattattgagagatagtctcacccttaccttagtttt 930091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 12168305 - 12168422
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12168305 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 12168403  T
Q  173 tcacccttaccatagtttt 191  Q
    ||||||||||| |||||||    
T  12168404 tcacccttaccttagtttt 12168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 19287214 - 19287331
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19287214 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 19287312  T
Q  173 tcacccttaccatagtttt 191  Q
    ||||||||||| |||||||    
T  19287313 tcacccttaccttagtttt 19287331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 19785982 - 19785865
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  ||| |||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  19785982 tcagaatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtc 19785884  T
Q  173 tcacccttaccatagtttt 191  Q
    ||||||||||| |||||||    
T  19785883 tcacccttaccttagtttt 19785865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 19878398 - 19878515
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19878398 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 19878496  T
Q  173 tcacccttaccatagtttt 191  Q
    ||||||||||| |||||||    
T  19878497 tcacccttaccttagtttt 19878515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 19884174 - 19884291
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19884174 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 19884272  T
Q  173 tcacccttaccatagtttt 191  Q
    ||||||| ||| |||||||    
T  19884273 tcaccctaaccttagtttt 19884291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 34640069 - 34639990
Alignment:
Q  104 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttacc 34639990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 130 - 294
Target Start/End: Original strand, 25397172 - 25397336
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaa--cgcacaacgaccagattctctga-ctat 226  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||| || ||  ||||||||  |||||||||| | |||||| | | || |    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttaccttaattc-agaagaaaaacgcacaacgatcggattcttttagctct 25397270  T
Q  227 acttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||| |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25397271 acttgctcttctctcat--ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 25397336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 34646743 - 34646664
Alignment:
Q  104 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34646743 ttattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttacc 34646664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 21565390 - 21565215
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||| | | |||||||   |||||||| |||||||||||| | ||||| ||||||||||| |||||||||||||||||||      
T  21565390 agattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaatttta 21565292  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacc 183  Q
    |   |||   ||||||||||||||||||||| ||||||| | |||||  |||| |||||||||||||||||||||||    
T  21565291 tcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacc 21565215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 25469816 - 25469708
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||| ||||| |||||||||   |||  |||||||||||||| |  ||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  173 tcacccttacc 183  Q
    |||||||||||    
T  25469718 tcacccttacc 25469708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 9187589 - 9187660
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9187589 tacttgttcttctctctcc-ttgttctttgttttctctcccaaaacttgtttcacgtaaaactgattctgacc 9187660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 298
Target Start/End: Complemental strand, 2286703 - 2286656
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2286703 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 2286656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 294
Target Start/End: Original strand, 12943152 - 12943288
Alignment:
Q  159 attgagagatagtctcacccttaccatagttttagaagaaac--gcacaacgaccagattctct-gactatacttgttcttctctccccgttgttcttgg 255  Q
    ||||||||||||||||||||||||| || ||  ||||||||   ||||||||| | ||||| || | || |||||| |||||||||||  |||| |||||    
T  12943152 attgagagatagtctcacccttaccttaattc-agaagaaaaatgcacaacgatcggattcccttggctctacttgctcttctctccc--ttgtccttgg 12943248  T
Q  256 tttt-ctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  12943249 tttttctctcccaaaacttgttttacgtaaaactgcttct 12943288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 23058057 - 23058109
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  23058057 ttgttcttggttttctctcccaaaacttgtttcacataaaactgcttgtgacc 23058109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 29483367 - 29483324
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29483367 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 29483324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 8767156 - 8767115
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 287  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8767156 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 8767115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 14615381 - 14615340
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 287  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14615381 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 14615340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 24512899 - 24512851
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcaccct 179  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccct 24512851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 9187498 - 9187547
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacc 9187547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 25348486 - 25348539
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacc 25348539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 25598643 - 25598696
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacc 25598696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 298
Target Start/End: Complemental strand, 933583 - 933550
Alignment:
Q  265 ccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||| ||||||||||||||||||||    
T  933583 ccaaaacttgttttacgtaaaactgcttctgacc 933550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 2286823 - 2286770
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 2286770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 18787161 - 18787202
Alignment:
Q  246 ttgttcttggttttctctcccaaaactt-gtttcacgtaaaa 286  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  18787161 ttgttcttggttttctctcccaaagcttggtttcacgtaaaa 18787202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 19471391 - 19471338
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| ||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacc 19471338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 31252413 - 31252474
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||    
T  31252413 caattagattaattttcagaaattatatattataatcattaaaagataatctcacccttacc 31252474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 3e-82; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 14762943 - 14762761
Alignment:
Q  1 gcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  14762943 gcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 14762844  T
Q  101 aatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14762843 aatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacc 14762761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20247974 - 20247792
Alignment:
Q  1 gcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  20247974 gcaacaaagattaagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 20247875  T
Q  101 aatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247874 aatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 20247792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 38310985 - 38310803
Alignment:
Q  1 gcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  38310985 gcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 38310886  T
Q  101 aatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38310885 aatttatcttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcacccttacc 38310803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 294
Target Start/End: Original strand, 9534205 - 9534491
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| ||||| |||||| ||||  ||||||||||||| |||||||||||||||||||||    
T  9534205 agattaagttttcattctaaacattacattacaacagaattaacatgatcaataccca-ttccactcagaatcatcatcaaaccctaaccctcaatttat 9534303  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag--aaacgcaca 205  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||  ||| |||||    
T  9534304 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta-attcagaagaaaaatgcaca 9534402  T
Q  206 acgaccagattctc-tgactatacttgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||| | ||||| | || || |||||| |||||||||||  |||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  9534403 acgatcggattcccttggctctacttgctcttctctccc--ttgtccttggtttttccctcccaaaacttgtttcacgtaaaactgcttct 9534491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 24192832 - 24193008
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||| | |||||||  ||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  24192832 agattaagttttcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 24192931  T
Q  108 tttcc-aaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24192932 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 24193008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 23370684 - 23370509
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| ||||||||    
T  23370684 agattaagttttcattctaaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttat 23370586  T
Q  108 tttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23370585 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttacc 23370509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 24933941 - 24933832
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| |||||||||   |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24933941 tcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 24933843  T
Q  173 tcacccttacc 183  Q
    |||||||||||    
T  24933842 tcacccttacc 24933832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 41455178 - 41455093
Alignment:
Q  105 tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41455178 tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 41455093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 16801606 - 16801463
Alignment:
Q  47 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaatt 145  Q
    |||||| ||||||||| | |||| | ||| ||||||||| || |||||||| ||||||| || ||| ||| ||||||||| |||||||||||||||||||    
T  16801606 ttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaatt 16801508  T
Q  146 atagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    ||| || ||||||||||||||||||||||||||||||| |||||||    
T  16801507 atatat-atgattattgagagatagtctcacccttaccttagtttt 16801463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 122 - 294
Target Start/End: Complemental strand, 17240577 - 17240407
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctct- 220  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||| || ||  |||| || ||||| ||   | | |  | |     
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttaccttaattc-agaa-aatcgcacgacacacggttgatatt 17240480  T
Q  221 gactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    | || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17240479 ggctctacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 17240407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 8579206 - 8579134
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8579206 tacttgttcttctctcccctttgttcttggttttctctcccaaaacttgtttgacgtaaaactgcttctgacc 8579134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 14085693 - 14085764
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14085693 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 14085764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 49400693 - 49400764
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49400693 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 49400764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 14091094 - 14091165
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14091094 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactacttctgacc 14091165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 55499281 - 55499105
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||||| | |||||||   |||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||      
T  55499281 agattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttta 55499183  T
Q  108 tttccaaaactaagcaattaggtcaatttt-cagaaattatagattat-gattattgagagatagtctcacccttacc 183  Q
    |   |||   |||||| ||||||||||||| | ||||||| | |||||  |||| |||||||||||||||||||||||    
T  55499182 tcctcaaggttaagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacc 55499105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 286
Target Start/End: Original strand, 18929239 - 18929398
Alignment:
Q  125 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-tgac 223  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||  || |||| |||||||| ||   ||||   || || |    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta-attcagaa-aaacgcacgacagtcagacgatcttggc 18929336  T
Q  224 tatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaa 286  Q
    | ||||||||||||||||||  | |||||||||| || ||||||||||||||||||||||||||    
T  18929337 tctacttgttcttctctccc--tagttcttggttcttttctcccaaaacttgtttcacgtaaaa 18929398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 16801147 - 16801194
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16801147 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 16801194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 298
Target Start/End: Complemental strand, 20247725 - 20247678
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247725 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 20247678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 38310736 - 38310687
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgaccct 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38310736 cttggttttctctcccaaaatttgtttcacgtaaaactgcttctgaccct 38310687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 54521876 - 54521919
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  54521876 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 54521919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 286
Target Start/End: Complemental strand, 31689737 - 31689679
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  31689737 tacttgctcttctctccc--ttgttcttggttttctctcccaaaacttatttcacgtaaaa 31689679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 31944489 - 31944547
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  31944489 tacttgctcttctctccc--ttgttcttggttttctctcccaaaacttgtttcacctaaaa 31944547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 24193082 - 24193120
Alignment:
Q  256 ttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24193082 ttttctctcccaaaacttgtttcacgtaaaactgcttct 24193120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 13302295 - 13302244
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttacc 13302244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 13323842 - 13323791
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttacc 13323791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 14288129 - 14288082
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  14288129 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttct 14288082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 12033499 - 12033448
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 12033448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 13312951 - 13312900
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttacc 13312900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 17131732 - 17131783
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 17131783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 35985770 - 35985820
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| |||||| |||||||    
T  35985770 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgtttctgac 35985820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 51301589 - 51301640
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttacc 51301640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 10389557 - 10389447
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| |||||||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  173 tcacccttacc 183  Q
     ||||||||||    
T  10389457 ccacccttacc 10389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 10414646 - 10414536
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| |||||||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  173 tcacccttacc 183  Q
     ||||||||||    
T  10414546 ccacccttacc 10414536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 10421316 - 10421206
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| |||||||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  173 tcacccttacc 183  Q
     ||||||||||    
T  10421216 ccacccttacc 10421206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 12203360 - 12203401
Alignment:
Q  246 ttgttcttggttttctctcccaaaactt-gtttcacgtaaaa 286  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  12203360 ttgttcttggttttctctcccaaagcttggtttcacgtaaaa 12203401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 16801027 - 16801080
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 16801080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 8 - 298
Target Start/End: Complemental strand, 20437202 - 20436913
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||||| |||||||   |||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  20437202 agattaagttttcattctgaacattacattacaacataattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttat 20437104  T
Q  108 tttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcac 204  Q
     |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    ||| ||| ||||    
T  20437103 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcac 20437004  T
Q  205 aacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||| | | ||||||||||||  ||||||||||| | |||  ||||||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  20437003 aacaatcggattctctgactccacttgttcttcccaccc--ttgttcttgattttctctccc-aaacttgtttcacgtaaaactgcttatgacc 20436913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 32651563 - 32651738
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctct 220  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  |||||||| |||| |||||||| | ||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 32651661  T
Q  221 gactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttg-tttcacgtaaaactgcttctgacc 298  Q
    ||||  |||||||||  |||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32651662 gactccacttgttct--tctcaccattgttcttggttttctctcccaaaacttgttttcacgtaaaactgcttctgacc 32651738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 41111977 - 41112094
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 41112075  T
Q  173 tcacccttaccatagtttt 191  Q
    ||||||||||| |||||||    
T  41112076 tcacccttaccttagtttt 41112094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 21543218 - 21543289
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21543218 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 21543289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 18712790 - 18712954
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-t 220  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||  || |||| || ||||| ||   | |||  || |    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta-attcagaa-aatcgcacgacacacggatgatctt 18712887  T
Q  221 gactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 287  Q
    | || ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  18712888 ggctctacttgttcttatctcccc-ttgttcttggttcttctctcccaaaacttgtttcacgtaaaac 18712954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 294
Target Start/End: Complemental strand, 19663572 - 19663410
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctct-gactatact 229  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||| || ||| || | || ||||| ||   | | |  ||| | || ||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta-tttcagga-aatcgcacgacacacgggtgatcttggctctact 19663475  T
Q  230 tgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  19663474 tgttcttctctcccc-ttgttcttggttcttttctcccaaaacttgtttcacgtaaaactgcttct 19663410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 42094902 - 42094850
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42094902 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 42094850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 20850115 - 20850166
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  20850115 ttgttcttggttttctctcccaaaacttgttttacataaaactgcttctgac 20850166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 286
Target Start/End: Original strand, 11158093 - 11158246
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-tgactatact 229  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||| ||  || |||| ||||||||  | | | |||  || || || ||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta-attcagaa-aaacgcacggcaatcggatgatcttggctctact 11158190  T
Q  230 tgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaa 286  Q
     |||||||||||||  | |||||||| |||||||||||||||||||||||||||||||    
T  11158191 agttcttctctccc--tagttcttggtttttctctcccaaaacttgtttcacgtaaaa 11158246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 29553545 - 29553504
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 287  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29553545 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 29553504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 10811839 - 10811786
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacc 10811786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 20805320 - 20805373
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacc 20805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 19777753 - 19777713
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  19777753 ttgttcttggttttctctcccaaaactagtttcacgtaaaa 19777713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 21736197 - 21736256
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaactt-gtttcacgtaaaa 286  Q
    |||||| |||||||||||  |||||||||||||||||||||||| ||| |||||||||||||    
T  21736197 tacttgctcttctctccc--ttgttcttggttttctctcccaaagcttggtttcacgtaaaa 21736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 5381715 - 5381765
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||| ||||    
T  5381715 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttatgac 5381765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 20851187 - 20851136
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 20851136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 20857814 - 20857763
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 20857763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 21706276 - 21706327
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 21706327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 21710818 - 21710869
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 21710869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 298
Target Start/End: Original strand, 16373102 - 16373132
Alignment:
Q  268 aaacttgtttcacgtaaaactgcttctgacc 298  Q
    |||||||||||||||||||||||||||||||    
T  16373102 aaacttgtttcacgtaaaactgcttctgacc 16373132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 11140205 - 11140164
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttg-tttcacgtaaaa 286  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  11140205 ttgttcttggttttctctcccaaagcttgttttcacgtaaaa 11140164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 8 - 294
Target Start/End: Original strand, 6483595 - 6483882
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  ||||||  ||||||||| ||||| |||||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  6483595 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttat 6483693  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcaca 205  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    ||| ||| |||||    
T  6483694 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcaca 6483793  T
Q  206 acgaccagattctc-tgactatacttgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    || | | ||||| | || || |||||| |||||||||||  |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  6483794 acaatccgattcccttggctctacttgctcttctctccc--ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 6483882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 8 - 294
Target Start/End: Original strand, 6487062 - 6487349
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  ||||||  ||||||||| ||||| |||||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  6487062 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttat 6487160  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcaca 205  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    ||| ||| |||||    
T  6487161 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcaca 6487260  T
Q  206 acgaccagattctc-tgactatacttgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    || | | ||||| | || || |||||| |||||||||||  |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  6487261 acaatccgattcccttggctctacttgctcttctctccc--ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 6487349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 19661631 - 19661457
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  19661631 agattaagttttcattctaaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttat 19661533  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  19661532 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacc 19661457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 26583715 - 26583886
Alignment:
Q  18 ttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaac 117  Q
    |||||||||||||| |  ||||||   | |||||| |||||||||||  ||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  26583715 ttcattctgaacatcactttacaacatatttaacatgatcattaccct-ttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaac 26583813  T
Q  118 taagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26583814 tatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 26583886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 23878885 - 23879059
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||| ||||||||||||||| | |||||||   |||||||| ||||||||||| |||||| ||||||||||||   |||||||||||||||||||     
T  23878885 agattaagatttcattctgaacatcacattacaacataattaacatgatcattaccccattcccctcagaatcatca-acaaccctaaccctcaatttaa 23878983  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |   |||   ||||||||||||||||||||  ||||||||| || || |||| |||||||||||||||||||||||    
T  23878984 tcctcaaggttaagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacc 23879059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 6743261 - 6743190
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6743261 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 6743190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 43694562 - 43694633
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43694562 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 43694633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 23089233 - 23089058
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||| | | |||||||   |||||||| |||||||||||| | ||||| ||||||||||| |||||||||||||||||||      
T  23089233 agattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaatttta 23089135  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacc 183  Q
    |   |||   ||||||||||||||||||||| ||||||| | |||||  |||| |||||||||||||||||||||||    
T  23089134 tcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacc 23089058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 23101641 - 23101466
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||| | | |||||||   |||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||      
T  23101641 agattaagatttcattccgaacgtcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttta 23101543  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacc 183  Q
    |   |||   ||| ||||||||||||||||| ||||||| | |||||  |||| |||||||||||||||||||||||    
T  23101542 tcctcaaggttaaacaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacc 23101466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 23265133 - 23265298
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaac-gacca--gattct 218  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  || |||| || ||||| ||  || |  ||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-attcagaa-aatcgcacgacacacgaatgattct 23265230  T
Q  219 ctgactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 287  Q
     || || ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  23265231 -tggctctacttgttcttctctcccc-ttgctcttggttcttctctcccaaaacttgtttcacgtaaaac 23265298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 23280201 - 23280366
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaac-gacca--gattct 218  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  || |||| || ||||| ||  || |  ||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-attcagaa-aatcgcacgacacacgaatgattct 23280298  T
Q  219 ctgactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 287  Q
     || || ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  23280299 -tggctctacttgttcttctctcccc-ttgctcttggttcttctctcccaaaacttgtttcacgtaaaac 23280366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 299
Target Start/End: Original strand, 9242961 - 9243129
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctctgactatac 228  Q
    |||||||||||||  ||| ||||| || |||||  | ||| |||||||||||| || |||    ||| ||| ||||||| | | ||||| ||||||  ||    
T  9242961 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttaatttagatgaacaaaagcacaacaatcggattccctgactccac 9243060  T
Q  229 ttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgaccc 299  Q
    ||||||||| | |||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9243061 ttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgaccc 9243129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 5706137 - 5706027
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 171  Q
    ||||||||||||| |||||||||   ||| |||  ||||| |||||||  |||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  172 ctcacccttacc 183  Q
    ||||||||||||    
T  5706038 ctcacccttacc 5706027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 21908353 - 21908411
Alignment:
Q  125 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacc 21908411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 10683871 - 10683828
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10683871 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 10683828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 20262273 - 20262316
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20262273 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 20262316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 201783 - 201831
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgt 275  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  201783 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgt 201831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 24944419 - 24944460
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 287  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24944419 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 24944460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 21908453 - 21908512
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaa 286  Q
    ||||||||||||||||||  | |||||||||| || ||||||||||||||||||||||||||    
T  21908453 tacttgttcttctctccc--tagttcttggttcttttctcccaaaacttgtttcacgtaaaa 21908512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 24661576 - 24661629
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||||| |||||||| || ||||| ||| ||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacc 24661629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 20649170 - 20649217
Alignment:
Q  250 tcttggttttctctcccaaaacttgttt-cacgtaaaactgcttctgac 297  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  20649170 tcttggtttt-tctcccaaaacttgttttcacgtaaaactgcttctgac 20649217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 10577 - 10628
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 10628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 25180984 - 25180933
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 25180933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 26885133 - 26885233
Alignment:
Q  83 cattaaaccctaaccctcaatttattttccaa-aactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 181  Q
    ||||| |||||||  |||||||| || ||||| |||||  | ||||| | ||||||||||||||||| |||| ||||||||| ||||| || ||||||||    
T  26885133 cattataccctaattctcaattttttctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccaccctta 26885231  T
Q  182 cc 183  Q
    ||    
T  26885232 cc 26885233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 1054 - 1237
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattta 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| |||| |||| ||||||||||||||||||||    
T  1054 aagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattta 1153  T
Q  107 ttttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1154 ttttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 50055 - 50238
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattta 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| |||| |||| ||||||||||||||||||||    
T  50055 aagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattta 50154  T
Q  107 ttttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50155 ttttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 50238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 931 - 746
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattta 106  Q
    ||||||||||||| || ||||||||||||||||||| | |||| || |||||||||||| ||||||||| |||| |||| ||||||||||||||||||||    
T  931 aagattaagtttttatcctgaacattatattacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattta 832  T
Q  107 ttttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  831 ttttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 8046016 - 8045828
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctca 101  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| |||||||||||||  || | |||||||||||||||    
T  8046016 caacaaggattaagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctca 8045917  T
Q  102 atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  8045916 atttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 8045828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 11847978 - 11848173
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctca 101  Q
    ||||||||||||||||||||||||||||||||||||| ||  | ||||||| |||||||||||| | | |||||||||| |||| |||||||||||||||    
T  11847978 caacaaagattaagttttcattctgaacattatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctca 11848077  T
Q  102 a------tttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |      || ||||| |||||||| || | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11848078 attgattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 11848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 16157883 - 16157953
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16157883 tacttgttcttctctccca-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 16157953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 298
Target Start/End: Original strand, 18213768 - 18213935
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctctgactatac 228  Q
    |||||||||||||| ||| ||||| || |||||  | ||| |||||||||||| || |||    ||| ||| ||||||| | | ||||||||||||  ||    
T  18213768 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctctgactccac 18213867  T
Q  229 ttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    | ||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18213868 tagttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 18213935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 53483646 - 53483756
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 171  Q
    ||||||||||||| |||||||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagt 53483744  T
Q  172 ctcacccttacc 183  Q
    ||||||||||||    
T  53483745 ctcacccttacc 53483756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 2757449 - 2757496
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2757449 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 2757496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 15408139 - 15408191
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 15408191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 15535235 - 15535278
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15535235 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 15535278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 49546883 - 49546840
Alignment:
Q  251 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  49546883 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 49546840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 14063796 - 14063836
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14063796 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 14063836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 8834895 - 8834948
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacc 8834948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 13888641 - 13888694
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacc 13888694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 14486661 - 14486712
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| |||||||| |||||  ||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacc 14486712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 181  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 15245215 - 15245268
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| ||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacc 15245268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 15308120 - 15308171
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 181  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| ||||||||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcaccctta 15308171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 27906266 - 27906315
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcaccctta 181  Q
    ||||||||||||||||| |||||||| ||||| ||||| || ||||||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccaccctta 27906315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 15747592 - 15747552
Alignment:
Q  151 ttatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagtttt 15747552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 129; Significance: 9e-67; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 14575 - 14399
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    ||||||||||||||||| |||||| | |||||||  ||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  14575 agattaagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 14476  T
Q  108 tttcc-aaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14475 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 14399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 294
Target Start/End: Complemental strand, 14325 - 14287
Alignment:
Q  256 ttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14325 ttttctctcccaaaacttgtttcacgtaaaactgcttct 14287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 9 - 191
Target Start/End: Original strand, 11219 - 11401
Alignment:
Q  9 gattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatt-tat 107  Q
    ||||||| ||||||| ||||||| | |||||||  ||||||||| ||||||||| || |||||| |||||||||||| |||||||||||||||||| |||    
T  11219 gattaagatttcattttgaacatcacattacaacagaattaacatgatcattactca-ttccctccagaatcatcatcaaaccctaaccctcaattctat 11317  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11318 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 11401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 9e-64; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 44477500 - 44477674
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  ||||||  ||||||||| ||||| |||||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  44477500 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttat 44477598  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44477599 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 44477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 44492658 - 44492832
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| |||||||  ||||||  ||||||||| ||||| |||||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  44492658 agattaagttttcattctaaacattacgttacaacagaattaacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttat 44492756  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492757 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 44492832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 23866490 - 23866674
Alignment:
Q  7 aagattaagttttcattctgaacattatattacaagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt 105  Q
    ||||||||||||  |||||||||||||||||||||   ||||||||| |||||||||||| ||| ||||| ||||||||| |||||||||||||||||||    
T  23866490 aagattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt 23866589  T
Q  106 attttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  23866590 attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagtttt 23866674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 8727911 - 8727736
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||||||||||| |||||||  ||||||||| ||||| |||||| | ||| ||||||||||| | |||||||||||||||||||||    
T  8727911 agattaagttttcattctgaacattacattacaacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttat 8727813  T
Q  108 tttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  8727812 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacc 8727736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 130 - 298
Target Start/End: Original strand, 18614271 - 18614437
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaa-cgcacaacgaccagattctctgactatac 228  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||| || ||| |||||||| ||||||| || | |||||||||||| |||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttaccttaattt-agaagaaaacgcacaatgatcggattctctgactctac 18614369  T
Q  229 ttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18614370 ttgttcttctcaccc--ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 18614437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 23482117 - 23481941
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctc 219  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| || |||    ||| ||| ||||||| | | |||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctc 23482018  T
Q  220 tgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    |||||  | ||||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23482017 tgactccagttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 23481941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 17054533 - 17054642
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  17054533 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 17054631  T
Q  173 tcacccttacc 183  Q
    |||||||||||    
T  17054632 tcacccttacc 17054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 23826302 - 23826373
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23826302 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 23826373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 27941032 - 27940946
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaa 95  Q
    ||||||| |||||||||||||||||| |||||||  ||||||||| ||||| ||||| |||||| ||||||||||||| |||||||||    
T  27941032 agattaaattttcattctgaacattacattacaacagaattaacatgatcaataccc-attcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 21283095 - 21283153
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  21283095 tacttgttcttctccccc--ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 21283153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 8727666 - 8727623
Alignment:
Q  255 gttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8727666 gttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 8727623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 39364919 - 39364972
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacc 39364972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 21321118 - 21321078
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21321118 ttgttcttggttttctctcccaaaactggtttcacgtaaaa 21321078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 21325716 - 21325676
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21325716 ttgttcttggttttctctcccaaaactggtttcacgtaaaa 21325676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 29643440 - 29643389
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacc 29643389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 14056619 - 14056567
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttacc 14056567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 25111976 - 25112028
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttacc 25112028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 24320725 - 24320674
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 24320674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 21931696 - 21931749
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacc 21931749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 164 - 350
Alignment:
Q  3 aacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaa 102  Q
    |||| ||||||||| |||| ||||||||  ||| ||||||  |||||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  164 aacatagattaagtcttcaatctgaacaccataatacaagaaaattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaa 262  T
Q  103 tttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  263 tttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatggttattgagagatagtctcacccttaccttagtttt 350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 10374 - 10199
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| ||||||||    
T  10374 agattaagttttcattctaaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttat 10276  T
Q  108 tttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10275 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttacc 10199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 1704 - 1529
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||||||||||||| ||||||| |||||||  ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| ||||||||    
T  1704 agattaagttttcattctaaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttat 1606  T
Q  108 tttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
     |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1605 cttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttacc 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 2081 - 1893
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctca 101  Q
    |||||| ||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||||| |  || ||| ||||||||| |||||||||||||||    
T  2081 caacaaggattaagttttcattatgaacattaaattacaagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctca 1984  T
Q  102 atttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    | ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  1983 aattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagtttt 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 8758 - 8570
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctca 101  Q
    |||||| ||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||||| |  || ||| ||||||||| |||||||||||||||    
T  8758 caacaaggattaagttttcattttgaacattaaattacaagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctca 8661  T
Q  102 atttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    | ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  8660 aattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagtttt 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 18039 - 18229
Alignment:
Q  2 caacaaagattaagttttcattctgaacattatattacaagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctc 100  Q
    ||||| || |||||||||||||||| |||| | |||||||   ||||||||| || ||||||| | ||||| | ||||||||||||||||| ||||||||    
T  18039 caacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctc 18137  T
Q  101 aatttattttccaaaa-ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18138 aatttattttcctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagtttt 18229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 116887 - 117062
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctct 220  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  |||||||| |||| |||||||| | ||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 116985  T
Q  221 gactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttg-tttcacgtaaaactgcttctgacc 298  Q
    ||||  ||||||| ||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  116986 gactccacttgtttttctcaccc--ttgttcttggttttctctcccaaaacttgttttcacgtaaaactgcttctgacc 117062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 30772 - 30917
Alignment:
Q  47 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaatt 145  Q
    |||||| |||| |||| | |||||| ||| ||||||||| ||||||||| ||||||||| |  ||||||||||| |||||||||||||||||||||||||    
T  30772 ttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaatt 30871  T
Q  146 atagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  30872 atagattatgattattgagagatagtctcacccttaccttagtttt 30917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 17539 - 17479
Alignment:
Q  233 tcttctctccccgttgttcttggtttt-ctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  17539 tcttctctccc--ttgtccttggtttttctctcccaaaacttgtttcacgtaaaacttcttct 17479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 1845 - 1728
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  1845 tcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 1747  T
Q  173 tcacccttaccatagtttt 191  Q
    ||||||||||| |||||||    
T  1746 tcacccttaccttagtttt 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 5868 - 5751
Alignment:
Q  73 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 172  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5868 tcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 5770  T
Q  173 tcacccttaccatagtttt 191  Q
    ||||||||||| |||||||    
T  5769 tcacccttaccttagtttt 5751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 3472 - 3296
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgat-cattacccaattcccttcagaatcatcattaaaccctaaccctcaattta 106  Q
    |||||||| ||||||||||||||| | |||||||   |||||||| ||| ||||||||| ||||| ||||||||||||| |||||||||||||||||||     
T  3472 agattaagatttcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttt 3374  T
Q  107 ttttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacc 183  Q
     |  ||||   ||||||||||||||||||||| ||||||| | |||||  |||| |||||||||||||||||||||||    
T  3373 atccccaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacc 3296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 122 - 294
Target Start/End: Original strand, 13623 - 13793
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctct- 220  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||| || ||  |||| || ||||| ||   | | |  | |     
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttaccttaattc-agaa-aatcgcacgacacacggttgatatt 13720  T
Q  221 gactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    | || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13721 ggctctacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 13793  T

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Target: scaffold0106 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 39563 - 39634
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39563 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 39634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 12999 - 12928
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12999 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 12928  T

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Target: scaffold0104; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 40746 - 40694
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttc-acgtaaaactgcttctgacc 298  Q
    |||||||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  40746 ttgttcttggtttt-tctcccaaaacttgattgtacgtaaaactgcttctgacc 40694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 3800 - 3625
Alignment:
Q  8 agattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttat 107  Q
    |||||||| |||||||| |||||| | |||||||   |||||||| |||||||||||| | ||| ||||||||||||| |||||||||||||||||||      
T  3800 agattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaatttta 3702  T
Q  108 tttccaaaactaagcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacc 183  Q
    |   |||   ||||||||||||||||||||| ||||||| | |||||  |||| |||||||||||||||||||||||    
T  3701 tcctcaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacc 3625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 29160 - 29089
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29160 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 29089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 34561 - 34490
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34561 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 34490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 45994 - 45923
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45994 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 45923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 51398 - 51327
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51398 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 51327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 282
Target Start/End: Original strand, 69749 - 69896
Alignment:
Q  134 ttttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaa-cgcacaacgaccagattctct-gactatacttg 231  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||| || ||| |||||||| ||| |||||| |  ||||||| | || ||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttaccttaattt-agaagaaaacgcgcaacgatcgaattctcttggctctacttg 69847  T
Q  232 ttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgt 282  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  69848 ttcttctctccc--ttgttcttggttttctctcccaaaacttgtttcacgt 69896  T

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Target: scaffold0011 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 173576 - 173505
Alignment:
Q  226 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  173576 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 79125 - 78984
Alignment:
Q  153 atgattattgagagatagtctcacccttaccatagttttagaagaaa--cgcacaacgaccagattctct-gactatacttgttcttctctccccgttgt 249  Q
    ||||| |||||||| ||| |||||||||||| || ||| ||||||||  |||||||||| | |||||||| | || |||||| |||||||||||  ||||    
T  79125 atgatcattgagagttagcctcacccttaccttaattt-agaagaaaaacgcacaacgatcggattctctcggctctacttgctcttctctccc--ttgt 79029  T
Q  250 tcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  79028 tctttgttttctctcccaaaacttgtttcacgtaaaactgcttct 78984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 298
Target Start/End: Complemental strand, 8825 - 8658
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctctgactatac 228  Q
    |||||||||||||  ||| ||||| || |||||  | ||| |||||||||||| || |||    ||| ||| ||||||| | ||||||||||||||  ||    
T  8825 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttaatttagatgaacaaaagcacaacaatcagattctctgactccac 8726  T
Q  229 ttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    ||||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8725 ttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 8658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 287
Target Start/End: Original strand, 6540 - 6653
Alignment:
Q  172 ctcacccttaccatagttttagaagaaa-cgcacaacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaa 270  Q
    |||||||||||| || ||| |||||||| |||||||||| |  |||||||| || |||||||||||||| |||  |||||||||||||||||||||||||    
T  6540 ctcacccttaccttaattt-agaagaaaacgcacaacgatcgaattctctggctctacttgttcttctcaccc--ttgttcttggttttctctcccaaaa 6636  T
Q  271 cttgtttcacgtaaaac 287  Q
    |||||||||||||||||    
T  6637 cttgtttcacgtaaaac 6653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 57; Significance: 8e-24; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 34524 - 34609
Alignment:
Q  213 gattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgaccct 300  Q
    ||||||||||||  ||||||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34524 gattctctgactccacttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgaccct 34609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 135473 - 135525
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 135525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 13697 - 13747
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  13697 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 13747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 101992 - 101827
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgacca---gattct 218  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||| ||  || |||| || ||||| ||   ||   ||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta-attcagaa-aatcgcacgacacacaaatgattct 101895  T
Q  219 ctgactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 287  Q
     || || ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  101894 -tggctctacttgttcttctctcccc-ttgctcttggttcttctctcccaaaacttgtttcacgtaaaac 101827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 45386 - 45278
Alignment:
Q  75 agaatcatcattaaaccctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 173  Q
    ||||||||||| |||||||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  174 cacccttacc 183  Q
    ||||||||||    
T  45287 cacccttacc 45278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 294
Target Start/End: Complemental strand, 34331 - 34169
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctct-gactatact 229  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||| || ||| || | || ||||| ||   | | |  ||| | || ||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta-tttcagga-aatcgcacgacacacgggtgatcttggctctact 34234  T
Q  230 tgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  34233 tgttcttctctcccc-ttgttcttggttcttttctcccaaaacttgtttcacgtaaaactgcttct 34169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 16811 - 16975
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-t 220  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  || |||| || ||||| ||   | |||  || |    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-attcagaa-aatcgcacgacacacggatgatctt 16908  T
Q  221 gactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 287  Q
    | || ||||||||||| ||||||| |||||||||||| ||||||||||||||| |||| |||||||||    
T  16909 ggctctacttgttcttgtctcccc-ttgttcttggttcttctctcccaaaactcgttttacgtaaaac 16975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 72 - 11
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacc 11  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 17643 - 17695
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttacc 17695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 40587 - 40535
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 40535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 40482 - 40439
Alignment:
Q  246 ttgttcttggttttctctc-ccaaaacttgtttcacgtaaaactg 289  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  40482 ttgttcttggttttc-ctctccaaaacttgtttcacgtaaaactg 40439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 15052 - 14940
Alignment:
Q  131 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctc-tgactatac 228  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||| ||   ||||||| ||||||||||||| | ||||| | || || |||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta--attagaagaaaacgcacaacgatcggattcccttggctctac 14955  T
Q  229 ttgttcttctctccc 243  Q
    |||||||||||||||    
T  14954 ttgttcttctctccc 14940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 2012 - 1964
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgttt-cacgtaaaactgcttct 294  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  2012 ttgttcttggtttt-tctcccaaaacttgtttgtacgtaaaactgcttct 1964  T

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Target: scaffold0317 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 286
Target Start/End: Original strand, 1378 - 1539
Alignment:
Q  123 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-tg 221  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||| || ||| |||| |||| |||  | | | |||  || ||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta-tttcagaa-aaacacacggcaatcggatgatcttg 1475  T
Q  222 actatacttgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaa 286  Q
     || |||||||||||||||  || | |||||||| |||||||||||||||||||||||||||||||    
T  1476 gctctacttgttcttctct--ccttagttcttggtttttctctcccaaaacttgtttcacgtaaaa 1539  T

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Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 22646 - 22596
Alignment:
Q  133 attttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacc 22596  T

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Target: scaffold0706 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 2463 - 2422
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 287  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2463 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 2422  T

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Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 12296 - 12349
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacc 12349  T

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Target: scaffold0506 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 9296 - 9336
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 286  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  9296 ttgttcttggttttctctcccaaaactggtttcacgtaaaa 9336  T

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Target: scaffold0490 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 5984 - 6034
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  5984 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 6034  T

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Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 13513 - 13563
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  13513 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 13563  T

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Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 39563 - 39510
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| ||||||||||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacc 39510  T

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Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 3952 - 3993
Alignment:
Q  246 ttgttcttggttttctctcccaaaactt-gtttcacgtaaaa 286  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  3952 ttgttcttggttttctctcccaaagcttggtttcacgtaaaa 3993  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 170909 - 170868
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 287  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  170909 ttgttcttggttttctctttcaaaacttgtttcacgtaaaac 170868  T

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Target: scaffold0815 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 1453 - 1501
Alignment:
Q  135 tttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttacc 1501  T

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Target: scaffold0266 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 24083 - 24134
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    |||| ||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  24083 ttgtccttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgacc 24134  T

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Target: scaffold0266; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 13528 - 13579
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 298  Q
    |||||||||||||| ||||||||||||||||| || | |||||||||| ||||    
T  13528 ttgttcttggtttt-tctcccaaaacttgttttacatgaaactgcttccgacc 13579  T

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Target: scaffold1318 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 1967 - 1916
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 1916  T

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Target: scaffold0583 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 5513 - 5563
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||| ||||    
T  5513 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttttgac 5563  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 9336 - 9387
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 9387  T

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Target: scaffold0309 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 9239 - 9289
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||||| ||||||||||||||||| |||| ||| ||||||||||    
T  9239 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaattgcttctgac 9289  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 10239 - 10290
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttacc 10290  T

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Target: scaffold0046 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 71645 - 71695
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    |||||||||||| | ||||||||||||||||| |||| ||||||||||||||    
T  71645 ttgttcttggttct-tctcccaaaacttgttttacgtgaaactgcttctgac 71695  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 135438 - 135489
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttacc 135489  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 493082 - 493032
Alignment:
Q  132 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttacc 493032  T

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Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 680 - 774
Alignment:
Q  98 ctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 191  Q
    |||||||||||||| | |||||  |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || |||||||||| |||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagtttt 774  T

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Target: scaffold0669 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 848 - 796
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttc-acgtaaaactgcttctgacc 298  Q
    |||||||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  848 ttgttcttggtttt-tctcccaaaacttgattgtacgtaaaactgcttctgacc 796  T

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Target: scaffold0609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 5922 - 5861
Alignment:
Q  122 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||    
T  5922 caattagattaattttcagaaattatatattataatcattgaaagataatcccacccttacc 5861  T

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Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 2684 - 2631
Alignment:
Q  130 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 183  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacc 2631  T

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Target: scaffold0178 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 26520 - 26572
Alignment:
Q  246 ttgttcttggttttctctcccaaaacttgtttc-acgtaaaactgcttctgacc 298  Q
    |||||||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  26520 ttgttcttggtttt-tctcccaaaacttgattgtacgtaaaactgcttctgacc 26572  T

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Target: scaffold0790 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 297
Target Start/End: Original strand, 5579 - 5615
Alignment:
Q  261 tctcccaaaacttgtttcacgtaaaactgcttctgac 297  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  5579 tctcccaaaacttgttttacgtgaaactgcttctgac 5615  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 53943 - 53986
Alignment:
Q  250 tcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 294  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||    
T  53943 tcttggtttt-tctcccaaaacttgttttacgtgaaactgcttct 53986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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