View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0664_low_36 (Length: 213)
Name: NF0664_low_36
Description: NF0664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0664_low_36 |
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Alignment Details
Target: chr6 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 55 - 198
Target Start/End: Original strand, 30737472 - 30737616
Alignment:
| Q |
55 |
tgtacacactatgcaatgaattaatcattgaagcaaggccaacaaatctattggaagcctccaatacaaaagaagcatcatagatgttttatatacat-c |
153 |
Q |
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| T |
30737472 |
tgtaaacactatggaatgaattcatccttgaagcaaggacacgaaatctattggaagcctccaatacaaaagaagtatcatagatgttttatatacatcc |
30737571 |
T |
|
| Q |
154 |
atgttaaattatgccttgacccaagcataataagtcatgtctgtg |
198 |
Q |
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||||||| |||||||||||| |||||||||||||||||||||||| |
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| T |
30737572 |
atgttaacttatgccttgactcaagcataataagtcatgtctgtg |
30737616 |
T |
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